mRNA_16825 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|177170
Unique Name	mRNA_16825
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|177170 vs. uniprot
Match: A0A835ZA58_9STRA (S-adenosyl-L-methionine-dependent methyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA58_9STRA)

HSP 1 Score: 686 bits (1771), Expect = 1.060e-249
Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 1

Query:    1 MTYNALLPELQVLLQLHAAGELAYKLGADRRQIRKTPQLKALHEWLLAHTESGAITRQEEVSMVPPLFLDVHPGHIILDMCAAPGSKTAQLLEMVTAPASTSTAGESPEGLVIANDANRDRAYLLAHQCRRTAAPCLCVTWCAAQLFPTLGPDAGGKGTVDKGIFDRVLADVPCSGDGTARKAPNIWRMWSTHGPLTLHPLQLSIAARGAALLKVGGLMVYSTCSLCPYEDEAVIAELLRRGKGGLELVDVTHELPGLKRRKGISSWVVLDDKTQVYVPEALNQRLRRSCFPPTAEEAPGLHLDRCMRFLPHDQDTGGFFVAVLRKVSAVTANMVSDAA 1017
            MTYNALLPELQVLLQLHAAGELAYKLGADRRQIRKTPQLKALHEWLLAHTESGAITRQEEVSMVPPLFLDVHPGHIILDMCAAPGSKTAQLLEMVTAPASTSTAGESPEGLVIANDANRDRAYLLAHQCRRTAAPCLCVTWCAAQLFPTLGPDAGGKGTVDKGIFDRVLADVPCSGDGTARKAPNIWRMWSTHGPLTLHPLQLSIAARGAALLKVGGLMVYSTCSLCPYEDEAVIAELLRRGKGGLELVDVTHELPGLKRRKGISSWVVLDDKTQVYVPEALNQRLRRSCFPPTAEEAPGLHLDRCMRFLPHDQDTGGFFVAVLRKVSAVTANMVSDAA
Sbjct:    1 MTYNALLPELQVLLQLHAAGELAYKLGADRRQIRKTPQLKALHEWLLAHTESGAITRQEEVSMVPPLFLDVHPGHIILDMCAAPGSKTAQLLEMVTAPASTSTAGESPEGLVIANDANRDRAYLLAHQCRRTAAPCLCVTWCAAQLFPTLGPDAGGKGTVDKGIFDRVLADVPCSGDGTARKAPNIWRMWSTHGPLTLHPLQLSIAARGAALLKVGGLMVYSTCSLCPYEDEAVIAELLRRGKGGLELVDVTHELPGLKRRKGISSWVVLDDKTQVYVPEALNQRLRRSCFPPTAEEAPGLHLDRCMRFLPHDQDTGGFFVAVLRKVSAVTANMVSDAA 339

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BLAST of jgi.p|Trimin1|177170 vs. uniprot
Match: H3HAP2_PHYRM (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HAP2_PHYRM)

HSP 1 Score: 326 bits (836), Expect = 8.950e-103
Identity = 171/312 (54.81%), Postives = 212/312 (67.95%), Query Frame = 1

Query:   79 GADRRQIRKTPQLKALHEWLLAHTESGAITRQEEVSMVPPLFLDVHPGHIILDMCAAPGSKTAQLLEMVTAPASTSTAGESPEGLVIANDANRDRAYLLAHQCRRTAAPCLCVTWCAAQLFPTLGPDAGGKGTVDKGIFDRVLADVPCSGDGTARKAPNIWRMWSTHGPLTLHPLQLSIAARGAALLKVGGLMVYSTCSLCPYEDEAVIAELLRRGKGGLELVDVTHELPGLKRRKGISSWVVLDDKTQVYVP----------EALNQRLRRSCFPPTAEEAPGLHLDRCMRFLPHDQDTGGFFVAVLRKVS 984
              +RR++RK P LK    WL+  + SG+ITRQE VSM+PPL L V P H +LDMCAAPGSKT+QLLE + +    +  G++P G+V+AND +  RAY+L HQ +R ++P L VT   AQ  P LG D    GT  +G+FDRVL D PCSGDGT RK P IW+ WS    + LHPLQL IA RGAALLKVGG M YSTC+  P E+EAV+A+LLR  KG LELVDV++ LP LKRR GIS+W VLD     Y            E    ++R + FPPTAEEA  LHLDRCMR LP D++TGGFF+ +L+KV+
Sbjct:  122 SVERRRVRKLPILKEFQSWLVELSNSGSITRQEAVSMIPPLVLGVEPHHKVLDMCAAPGSKTSQLLESLHSQEFAT--GKTPTGVVVANDVDLKRAYMLVHQSKRISSPALLVTCHEAQNIPFLGKD----GTEKEGVFDRVLCDAPCSGDGTLRKNPLIWKNWSAKNGIALHPLQLQIAKRGAALLKVGGNMCYSTCTFNPLENEAVVADLLRWSKGSLELVDVSNTLPLLKRRPGISTWKVLDSTLTEYTSFDDYVVKNTEEKKKDKIRATMFPPTAEEADTLHLDRCMRCLPQDENTGGFFICLLKKVA 427

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BLAST of jgi.p|Trimin1|177170 vs. uniprot
Match: G4ZPP8_PHYSP (SAM_MT_RSMB_NOP domain-containing protein (Fragment) n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZPP8_PHYSP)

HSP 1 Score: 322 bits (825), Expect = 4.060e-102
Identity = 167/312 (53.53%), Postives = 212/312 (67.95%), Query Frame = 1

Query:   79 GADRRQIRKTPQLKALHEWLLAHTESGAITRQEEVSMVPPLFLDVHPGHIILDMCAAPGSKTAQLLEMVTAPASTSTAGESPEGLVIANDANRDRAYLLAHQCRRTAAPCLCVTWCAAQLFPTLGPDAGGKGTVDKGIFDRVLADVPCSGDGTARKAPNIWRMWSTHGPLTLHPLQLSIAARGAALLKVGGLMVYSTCSLCPYEDEAVIAELLRRGKGGLELVDVTHELPGLKRRKGISSWVVLDDKTQVYVP----------EALNQRLRRSCFPPTAEEAPGLHLDRCMRFLPHDQDTGGFFVAVLRKVS 984
              +RR++RK P LK    WL+  + SG+ITRQE VSM+PPL L V   H +LDMCAAPGSKT+QLLE + +    +  G++P G+V+AND +  RAY+L HQ +R ++P L VT   AQ  P LG D    GT   G+FDR+L D PCSGDGT RK P IW+ WS    + LHPLQL IA RGAALLKVGG M YSTC+  P E+EAV+A+LLR GKG LELVDV++ LP LKRR GI++W V+D K   +            E    ++R + FPPTAEEA  LHL+RCMR LP D++TGGFF+ +L+KV+
Sbjct:  126 SVERRRVRKLPILKEFQSWLVELSNSGSITRQEAVSMIPPLVLGVESHHKVLDMCAAPGSKTSQLLESLHSKEFET--GKTPTGVVVANDVDLKRAYMLVHQSKRISSPALLVTCHEAQNIPFLGED----GTERDGVFDRILCDAPCSGDGTLRKNPLIWKNWSAKNGIALHPLQLQIAKRGAALLKVGGNMCYSTCTFNPLENEAVVADLLRWGKGSLELVDVSNTLPLLKRRPGINTWKVMDSKLTEFASYEDYVAQDEKEKTKDKIRATMFPPTAEEAENLHLERCMRCLPQDENTGGFFICLLKKVA 431

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BLAST of jgi.p|Trimin1|177170 vs. uniprot
Match: A0A6H5LDC1_9PHAE (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDC1_9PHAE)

HSP 1 Score: 329 bits (844), Expect = 1.320e-101
Identity = 187/428 (43.69%), Postives = 227/428 (53.04%), Query Frame = 1

Query:   55 AGELAYKLGADRRQIRKTPQLKALHEWLLAHTESGAITRQEEVSMVPPLFLDVHPGHIILDMCAAPGSKTAQLLEMVTAPASTSTAG------------ESPEGLVIANDANRDRAYLLAHQCRRTAAPCLCVTWCAAQLFPTLGPDAGGKGTVDKGIFDRVLADVPCSGDGTARKAPNIWRMWSTHGPLTLHPLQLSIAARGAALLKVGGLMVYSTCSLCPYEDEAVIAELLRRGKGGLELVDVTHELPGLKRRKGISSWVVLDDKTQ--------------------------------------------------------------------------------------------------------VYVPEALNQRLRRSCFPPTAEEAPGLHLDRCMRFLPHDQDTGGFFVAVLRKVSAV 990
            AG LAY+LG DRR IRK P L   H+WL    ESG ITRQE VSM+PPLFLDV P H++LDMCAAPGSKTAQL+EM++AP++T                +   GLV+AND++RDRAY+LAHQC+R  +P +C+TWC+AQ  P LG     +G+ DKG+FDRVLADVPCSGDGT RK P IWR W+  G L LHPLQL I  RGAA+LK+GG MVYSTCSL P EDEAV+AE+LRR  G LEL D    LPGLK R G+ +W VL    +                                                                                                          V  A  +++  S FPP  ++A  L L+RCMR LP DQDTGGFFV+V+ K   +
Sbjct:  124 AGGLAYRLGCDRRFIRKQPHLAEFHKWLTGLMESGNITRQEAVSMLPPLFLDVQPKHLVLDMCAAPGSKTAQLMEMISAPSATXXXXXXXXXXXXXXXXDGDVGLVVANDSDRDRAYMLAHQCKRVQSPAICITWCSAQSLPNLGAAGAERGS-DKGVFDRVLADVPCSGDGTLRKQPAIWRTWTVAGGLGLHPLQLLITLRGAAMLKIGGKMVYSTCSLNPIEDEAVVAEVLRRCGGNLELEDCHSTLPGLKTRPGLHTWPVLTGSARFKGVKNNHRSNSGKGGGAVGSSSIPPTGAEANVCAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQAGGFTEPAVASDAPLEDAIKAGLRHHPSFAEVDTATTRKMIPSFFPPDEDKAKALRLERCMRMLPQDQDTGGFFVSVMVKTGPI 550

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BLAST of jgi.p|Trimin1|177170 vs. uniprot
Match: A0A662X353_9STRA (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X353_9STRA)

HSP 1 Score: 323 bits (829), Expect = 2.940e-101
Identity = 171/312 (54.81%), Postives = 213/312 (68.27%), Query Frame = 1

Query:   79 GADRRQIRKTPQLKALHEWLLAHTESGAITRQEEVSMVPPLFLDVHPGHIILDMCAAPGSKTAQLLEMVTAPASTSTAGESPEGLVIANDANRDRAYLLAHQCRRTAAPCLCVTWCAAQLFPTLGPDAGGKGTVDKGIFDRVLADVPCSGDGTARKAPNIWRMWSTHGPLTLHPLQLSIAARGAALLKVGGLMVYSTCSLCPYEDEAVIAELLRRGKGGLELVDVTHELPGLKRRKGISSWVVLDDKTQVY------VPE----ALNQRLRRSCFPPTAEEAPGLHLDRCMRFLPHDQDTGGFFVAVLRKVS 984
              +RR++RK P LK    WL+  + SG+ITRQE VSM+PPL L V P H +LDMCAAPGSKT+QLLE + +    S  G++P G+V+AND +  RAY+L HQ +R ++P L VT   AQ  P LG D    GT  +G+FDR+L D PCSGDGT RK P IW+ WS    + LHPLQL IA RGAALLKVGG M YSTC+  P E+EAV+A+LLR G G LELVDV+  LP LKRR GI+SW VLD K   Y      V E        +++ + FPPT EEA GLHL+RCMR LP D++TGGFF+ +L+KV+
Sbjct:  135 SVERRRVRKLPILKEFQTWLVELSNSGSITRQEAVSMIPPLVLGVEPHHKVLDMCAAPGSKTSQLLESLHSQERAS--GKTPTGVVVANDVDLKRAYMLVHQSKRISSPALLVTCHEAQNIPFLGDD----GTEREGVFDRILCDAPCSGDGTLRKNPLIWKHWSAKNGIALHPLQLQIAKRGAALLKVGGNMCYSTCTFNPLENEAVVADLLRWGNGSLELVDVSDTLPLLKRRLGITSWKVLDSKLTEYSSFEHFVAENEKSEKKDKMKVTMFPPTTEEAAGLHLERCMRCLPQDENTGGFFICLLKKVA 440

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BLAST of jgi.p|Trimin1|177170 vs. uniprot
Match: M4B481_HYAAE (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B481_HYAAE)

HSP 1 Score: 323 bits (828), Expect = 3.960e-101
Identity = 168/311 (54.02%), Postives = 214/311 (68.81%), Query Frame = 1

Query:   79 GADRRQIRKTPQLKALHEWLLAHTESGAITRQEEVSMVPPLFLDVHPGHIILDMCAAPGSKTAQLLEMVTAPASTSTAGESPEGLVIANDANRDRAYLLAHQCRRTAAPCLCVTWCAAQLFPTLGPDAGGKGTVDKGIFDRVLADVPCSGDGTARKAPNIWRMWSTHGPLTLHPLQLSIAARGAALLKVGGLMVYSTCSLCPYEDEAVIAELLRRGKGGLELVDVTHELPGLKRRKGISSWVVLDDKTQVYVP----------EALNQRLRRSCFPPTAEEAPGLHLDRCMRFLPHDQDTGGFFVAVLRKV 981
              +RR++RK P LK    WL+  ++SG+ITRQE VSM+PPL L V P H +LDMCAAPGSKT+QLLE + +    +  G++P G+V+AND +  RAY+L HQ +R  +P L VT   AQ FP LG D    GT  KG+FDR+L DVPCSGDGT RK P IW+ WS    + LHPLQL IA RGA+LLKVGG + YSTC+  P E+EAV++ELLR  KG LELVDV++ LP LKRR GIS+W VLD + + +            + +  ++R + FPPT EEA   HL+RCMR LP D++TGGFFV +LRKV
Sbjct:  127 SVERRRVRKLPILKKFQAWLVELSDSGSITRQEAVSMIPPLVLGVEPHHKVLDMCAAPGSKTSQLLESLHSQELAT--GKTPTGVVVANDVDLKRAYMLVHQSKRINSPALLVTCHEAQHFPFLGKD----GTESKGVFDRILCDVPCSGDGTIRKNPLIWKSWSAKNGIALHPLQLQIAKRGASLLKVGGNLCYSTCTFNPLENEAVVSELLRWSKGSLELVDVSNTLPLLKRRPGISTWKVLDSQLKEHSSCDIHGNENKEDKVIDKIRATMFPPTEEEAANYHLERCMRCLPQDENTGGFFVCLLRKV 431

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BLAST of jgi.p|Trimin1|177170 vs. uniprot
Match: A0A421F623_9STRA (SAM_MT_RSMB_NOP domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421F623_9STRA)

HSP 1 Score: 323 bits (827), Expect = 5.200e-101
Identity = 169/312 (54.17%), Postives = 211/312 (67.63%), Query Frame = 1

Query:   79 GADRRQIRKTPQLKALHEWLLAHTESGAITRQEEVSMVPPLFLDVHPGHIILDMCAAPGSKTAQLLEMVTAPASTSTAGESPEGLVIANDANRDRAYLLAHQCRRTAAPCLCVTWCAAQLFPTLGPDAGGKGTVDKGIFDRVLADVPCSGDGTARKAPNIWRMWSTHGPLTLHPLQLSIAARGAALLKVGGLMVYSTCSLCPYEDEAVIAELLRRGKGGLELVDVTHELPGLKRRKGISSWVVLDDKTQVYVP----------EALNQRLRRSCFPPTAEEAPGLHLDRCMRFLPHDQDTGGFFVAVLRKVS 984
              +RR++RK P LKA   WL+  + SG+ITRQE VSM+PPL L V P H +LDMCAAPGSKT+QLLE + +    +  G +P G+V+AND +  RAY+L HQ +R ++P L VT   AQ  P LG +    GT   G+FDR+L D PCSGDGT RK P IW+ WS    + LHPLQL IA RGAALLKVGG + YSTC+  P E+EAV+AELLR  KG LELVDV+  LP LKRR GIS+W VLD K   +            E    +LR + FPPTA+EA  LHL+RCMR LP D++TGGFF+ +L+KV+
Sbjct:  128 SVERRRVRKLPILKAFQTWLVELSNSGSITRQEAVSMIPPLVLGVEPHHKVLDMCAAPGSKTSQLLESLHSQELAT--GNTPTGVVVANDVDLKRAYMLVHQSKRISSPALLVTCHEAQNIPFLGEE----GTESDGVFDRILCDAPCSGDGTLRKNPLIWKNWSAKNGIALHPLQLQIAKRGAALLKVGGNICYSTCTFNPLENEAVVAELLRWSKGSLELVDVSSTLPLLKRRPGISTWKVLDSKLTEFASYEDWVVENTKEKRKDKLRSTMFPPTAKEAADLHLERCMRCLPQDENTGGFFICLLKKVA 433

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BLAST of jgi.p|Trimin1|177170 vs. uniprot
Match: W2QK78_PHYPN (SAM_MT_RSMB_NOP domain-containing protein n=15 Tax=Phytophthora TaxID=4783 RepID=W2QK78_PHYPN)

HSP 1 Score: 319 bits (817), Expect = 1.240e-100
Identity = 164/312 (52.56%), Postives = 212/312 (67.95%), Query Frame = 1

Query:   79 GADRRQIRKTPQLKALHEWLLAHTESGAITRQEEVSMVPPLFLDVHPGHIILDMCAAPGSKTAQLLEMVTAPASTSTAGESPEGLVIANDANRDRAYLLAHQCRRTAAPCLCVTWCAAQLFPTLGPDAGGKGTVDKGIFDRVLADVPCSGDGTARKAPNIWRMWSTHGPLTLHPLQLSIAARGAALLKVGGLMVYSTCSLCPYEDEAVIAELLRRGKGGLELVDVTHELPGLKRRKGISSWVVLDDKTQVYVP----------EALNQRLRRSCFPPTAEEAPGLHLDRCMRFLPHDQDTGGFFVAVLRKVS 984
              +RR++RK P LK    WL+  + SG+ITRQE VSM+PPL L V P H +LDMCAAPGSKT+QLLE + +    +  G++P G+V+AND +  RAY+L HQ +R  +P L VT   AQ  P LG D    GT  +G+FDR+L D PCSGDGT RK P IW+ WS    + LHPLQL IA RGA LLKVGG M YSTC+  P E+EAV+A+LLR  KG LELVDV++ LP LKRR GIS+W V+D + + Y            + +  ++R + FPPT +EA  LHL+RCMR LP D++TGGFF+ +L+KV+
Sbjct:  128 SVERRRVRKLPILKEFQSWLVELSNSGSITRQEAVSMIPPLVLGVEPYHKVLDMCAAPGSKTSQLLESLHSQELAT--GKTPTGVVVANDVDLKRAYMLVHQSKRINSPALLVTCHEAQNIPFLGKD----GTESEGVFDRILCDAPCSGDGTLRKNPLIWKNWSAKNGIALHPLQLQIAKRGATLLKVGGNMCYSTCTFNPLENEAVVADLLRWSKGSLELVDVSNTLPLLKRRPGISTWKVMDSQLKEYSSYENYVEENKKDKIKDKIRATMFPPTEKEAADLHLERCMRCLPQDENTGGFFICLLKKVA 433

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BLAST of jgi.p|Trimin1|177170 vs. uniprot
Match: A0A1E7F5Y6_9STRA (S-adenosyl-L-methionine-dependent methyltransferase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F5Y6_9STRA)

HSP 1 Score: 309 bits (791), Expect = 2.440e-100
Identity = 157/305 (51.48%), Postives = 199/305 (65.25%), Query Frame = 1

Query:   70 YKLGADRRQIRKTPQLKALHEWLLAHTESGAITRQEEVSMVPPLFLDVHPGHIILDMCAAPGSKTAQLLEMVTAPASTSTAGESPEGLVIANDANRDRAYLLAHQCRRTAAPCLCVTWCAAQLFPTL-GPDAGGKGTVDKGIFDRVLADVPCSGDGTARKAPNIWRMWSTHGPLTLHPLQLSIAARGAALLKVGGLMVYSTCSLCPYEDEAVIAELLRRGKGGLELVDVTHELPGLKRRKGISSWVVLDDKTQVYVPEALNQRLRRSCFPPTAEEAPGLHLDRCMRFLPHDQDTGGFFVAVLRKV 981
            Y++  D++ +R+    K  H WL   TE+G +TRQE VSM+PP+ LD  P H+ILDM AAPGSKT+QLLE+V  P  T      P G V+ANDA+  RAY+L HQ RR  +P + +T C A+ FP L   D+   G  D+GIFDRVL DVPCSGDGT RK P +W+ W+      LHPLQL+IA RGA   KVGG + YSTCS+ P E+EAV+AELLR  +G LELV+   EL GL  R G+ +W  L +         + +R+R +CFPPT EE    +L  CMR LP D DTGGFFVA+L+KV
Sbjct:   69 YQVSIDKQTLRRNTAFKPFHNWLKVQTEAGFVTRQEAVSMIPPIVLDPKPHHVILDMAAAPGSKTSQLLEIVNLP--TDKDCHEPVGCVVANDADVKRAYMLVHQMRRINSPAVFITSCDARFFPLLRSKDSESTGDSDEGIFDRVLCDVPCSGDGTTRKNPGVWKNWTCLNGYALHPLQLAIALRGAQSTKVGGYLCYSTCSMNPIENEAVVAELLRASEGSLELVERKSELTGLVSRPGMDTWTNLSE---------MRKRIRSTCFPPTPEEISKFNLKHCMRILPQDMDTGGFFVALLKKV 362

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BLAST of jgi.p|Trimin1|177170 vs. uniprot
Match: A0A662Y9A9_9STRA (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y9A9_9STRA)

HSP 1 Score: 325 bits (833), Expect = 3.430e-99
Identity = 171/312 (54.81%), Postives = 214/312 (68.59%), Query Frame = 1

Query:   79 GADRRQIRKTPQLKALHEWLLAHTESGAITRQEEVSMVPPLFLDVHPGHIILDMCAAPGSKTAQLLEMVTAPASTSTAGESPEGLVIANDANRDRAYLLAHQCRRTAAPCLCVTWCAAQLFPTLGPDAGGKGTVDKGIFDRVLADVPCSGDGTARKAPNIWRMWSTHGPLTLHPLQLSIAARGAALLKVGGLMVYSTCSLCPYEDEAVIAELLRRGKGGLELVDVTHELPGLKRRKGISSWVVLDDKTQVY------VPE----ALNQRLRRSCFPPTAEEAPGLHLDRCMRFLPHDQDTGGFFVAVLRKVS 984
              +RR++RK P LK    WL+  + SG+ITRQE VSM+PPL L V P H +LDMCAAPGSKT+QLLE + +    +  G++P G+V+AND +  RAY+L HQ +R ++P L VT   AQ  P LG D    GT  +G+FDR+L D PCSGDGT RK P IW+ WS    + LHPLQL IA RGAALLKVGG M YSTC+  P E+EAV+A+LLR G G LELVDV+  LP LKRR GI+SW VLD K   Y      V E        +++ + FPPTAEEA GLHL+RCMR LP D++TGGFF+ +L+KV+
Sbjct:  110 SVERRRVRKLPILKEFQTWLVELSNSGSITRQEAVSMIPPLVLGVEPHHKVLDMCAAPGSKTSQLLESLHSQERAT--GKTPTGVVVANDVDLKRAYMLVHQSKRISSPALLVTCHEAQNIPFLGDD----GTEREGVFDRILCDAPCSGDGTLRKNPLIWKHWSAKNGIALHPLQLQIAKRGAALLKVGGNMCYSTCTFNPLENEAVVADLLRWGNGSLELVDVSDTLPLLKRRPGITSWKVLDSKLTEYSSFEHFVAENEKSEKKDKMKATMFPPTAEEAAGLHLERCMRCLPQDENTGGFFICLLKKVA 415

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|177170 vs. uniprot

BLAST of jgi.p|Trimin1|177170 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZA58_9STRA	1.060e-249	100.00	S-adenosyl-L-methionine-dependent methyltransferas...	[more]
H3HAP2_PHYRM	8.950e-103	54.81	SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=...	[more]
G4ZPP8_PHYSP	4.060e-102	53.53	SAM_MT_RSMB_NOP domain-containing protein (Fragmen...	[more]
A0A6H5LDC1_9PHAE	1.320e-101	43.69	SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=...	[more]
A0A662X353_9STRA	2.940e-101	54.81	SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=...	[more]
M4B481_HYAAE	3.960e-101	54.02	SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=...	[more]
A0A421F623_9STRA	5.200e-101	54.17	SAM_MT_RSMB_NOP domain-containing protein n=4 Tax=...	[more]
W2QK78_PHYPN	1.240e-100	52.56	SAM_MT_RSMB_NOP domain-containing protein n=15 Tax...	[more]
A0A1E7F5Y6_9STRA	2.440e-100	51.48	S-adenosyl-L-methionine-dependent methyltransferas...	[more]
A0A662Y9A9_9STRA	3.430e-99	54.81	SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_147	contig	Contig_147:212824..218444 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|177170\|e_gw1.147.46.1
BRITE	ko00000,ko01000,ko03016
KEGG ko	ko:K15335
EC	2.1.1.203
Description	16S rRNA methyltransferase RsmB/F
COG category	J
Max annot lvl	4776\|Peronosporales
EggNOG OGs	COG0144@1\|root,KOG2198@2759\|Eukaryota,3Q77F@4776\|Peronosporales
Evalue	1.47e-103
Seed ortholog	164328.Phyra93316
Hectar predicted targeting category	other localisation
Ec32 ortholog description	S-adenosyl-L-methionine-dependent methyltransferase
Ec32 ortholog	Ec-22_001160.1
TranscriptId	177492
Track	FilteredModels1
ProteinId	177170

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|177170	gene_16825	Tribonema minus UTEX_B_3156	gene	Contig_147 212824..218444 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|177170	Trimin1\|177170\|e_gw1.147.46.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_147 212824..218444 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_16825_1	exon_16825_1	Tribonema minus UTEX_B_3156	exon	Contig_147 212824..213003 +
exon_16825_2	exon_16825_2	Tribonema minus UTEX_B_3156	exon	Contig_147 213654..213908 +
exon_16825_3	exon_16825_3	Tribonema minus UTEX_B_3156	exon	Contig_147 214494..214700 +
exon_16825_4	exon_16825_4	Tribonema minus UTEX_B_3156	exon	Contig_147 215406..215592 +
exon_16825_5	exon_16825_5	Tribonema minus UTEX_B_3156	exon	Contig_147 217778..217884 +
exon_16825_6	exon_16825_6	Tribonema minus UTEX_B_3156	exon	Contig_147 218364..218444 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_16825	CDS_16825	Tribonema minus UTEX_B_3156	CDS	Contig_147 212824..213003 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_147:212824..218444+
coding sequence from alignment at Contig_147:212824..218444+

spliced messenger RNA

>mRNA_16825 ID=mRNA_16825|Name=jgi.p|Trimin1|177170|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1017bp|location=Sequence derived from alignment at Contig_147:212824..218444+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACGTACAATGCGTTACTTCCTGAACTTCAAGTACTACTTCAACTTCA
TGCCGCAGGCGAGCTGGCGTACAAGCTGGGAGCTGACAGGCGTCAGATTC
GCAAGACGCCGCAGCTGAAGGCGCTGCACGAGTGGCTGCTGGCACACACA
GAGAGTGGCGCTATCACCCGTCAAGAGGAGGTCTCCATGGTACCCCCCCT
CTTCCTGGACGTCCACCCCGGCCACATCATACTAGACATGTGCGCCGCAC
CCGGATCCAAAACCGCACAGCTGCTGGAGATGGTAACTGCCCCCGCTTCA
ACTTCAACAGCGGGAGAGTCGCCTGAGGGTCTGGTGATAGCAAATGATGC
CAACAGGGACAGGGCGTATCTGCTGGCGCACCAGTGCAGGCGTACCGCCG
CGCCGTGCCTGTGCGTCACGTGGTGCGCAGCTCAGCTGTTCCCGACTCTG
GGCCCAGACGCGGGAGGCAAGGGCACAGTGGACAAAGGCATTTTTGATAG
AGTTTTGGCAGATGTACCATGCAGTGGCGATGGCACTGCACGCAAGGCAC
CTAACATCTGGCGTATGTGGAGCACGCATGGTCCGCTCACACTGCACCCG
CTGCAGCTGTCCATTGCCGCTAGGGGCGCAGCCCTGCTCAAGGTCGGCGG
TTTGATGGTCTACTCAACGTGCTCGCTGTGCCCATACGAAGACGAAGCGG
TGATAGCTGAGCTGCTGCGAAGGGGGAAGGGGGGTCTTGAACTGGTGGAC
GTGACCCATGAACTGCCAGGGCTCAAGCGCAGGAAGGGGATCAGCAGCTG
GGTGGTGCTGGATGACAAGACGCAGGTATATGTGCCGGAGGCTCTCAACC
AGCGACTTCGACGCAGCTGCTTCCCTCCAACTGCTGAGGAGGCCCCTGGT
CTGCACCTGGACAGGTGTATGAGGTTCCTTCCTCACGACCAGGACACGGG
CGGCTTCTTCGTGGCCGTGCTGAGGAAAGTCTCAGCCGTCACAGCCAACA
TGGTCAGCGACGCAGCA

protein sequence of jgi.p|Trimin1|177170

>Trimin1|177170|e_gw1.147.46.1 ID=Trimin1|177170|e_gw1.147.46.1|Name=jgi.p|Trimin1|177170|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=339bp
MTYNALLPELQVLLQLHAAGELAYKLGADRRQIRKTPQLKALHEWLLAHT
ESGAITRQEEVSMVPPLFLDVHPGHIILDMCAAPGSKTAQLLEMVTAPAS
TSTAGESPEGLVIANDANRDRAYLLAHQCRRTAAPCLCVTWCAAQLFPTL
GPDAGGKGTVDKGIFDRVLADVPCSGDGTARKAPNIWRMWSTHGPLTLHP
LQLSIAARGAALLKVGGLMVYSTCSLCPYEDEAVIAELLRRGKGGLELVD
VTHELPGLKRRKGISSWVVLDDKTQVYVPEALNQRLRRSCFPPTAEEAPG
LHLDRCMRFLPHDQDTGGFFVAVLRKVSAVTANMVSDAA

mRNA from alignment at Contig_147:212824..218444+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_16825 ID=mRNA_16825|Name=jgi.p|Trimin1|177170|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5621bp|location=Sequence derived from alignment at Contig_147:212824..218444+ (Tribonema minus UTEX_B_3156 )
ATGACGTACAATGCGTTACTTCCTGAACTTCAAGTACTACTTCAACTTCA
TGCCGCAGGCGAGCTGGCGTACAAGCTGGGAGCTGACAGGCGTCAGATTC
GCAAGACGCCGCAGCTGAAGGCGCTGCACGAGTGGCTGCTGGCACACACA
GAGAGTGGCGCTATCACCCGTCAAGAGGAGGTATGTTAGTATCATGCACA
GTATGCCAAGCCTTACGGTCACATATTTTTTTGCAGCAGGAGTATACTGT
ATGCATGTAGACAAGAGCGGCGCTCTCCCCTCTTACCCTTACAGGCCAAC
AAGACATGTAGAATACTGATATGTTTCTGCCGAGCTTTGCCCGCCGCCCC
TTCCTGTGTGATGGGTACCATTGCCCTGGTTCTTCCGTCATTGTGTAAAT
GTGATGGCATCCCACTTAGGGTCAGGGTTAGGTTTAGGCCATACACGTGA
GACTGAATTACGTTCACAATTAGCAGTGGTGCGAGTGGCCATGGCTTCCT
GCTTGCCCTGAATCAGCGCACCCTTCACCTCATGCTCATGACACAAGGGC
GTACATACATACATACACTGAATGAGCGCACGTTCCACATCATGCTCATG
GGCACAAAGGCGAATATTCATTGCCTGCCAGTGCACTGCTGATGCAACAT
GACCTCCCCCCCCCCCCCCTGCCCTCTATGCTCAACAACAAATCAACATG
CTGGTTCGTCTCGACCAATACTTTCAAGTAAAATGCATGCTTCAACCATA
GGTTTATCAGCCTTCTTGATTCTTTCATTTTCTAAAAACAACGCATACGT
ACATACCCACACACCTGAGCGCTGCTGCAGGTCTCCATGGTACCCCCCCT
CTTCCTGGACGTCCACCCCGGCCACATCATACTAGACATGTGCGCCGCAC
CCGGATCCAAAACCGCACAGCTGCTGGAGATGGTAACTGCCCCCGCTTCA
ACTTCAACAGCGGGAGAGTCGCCTGAGGGTCTGGTGATAGCAAATGATGC
CAACAGGGACAGGGCGTATCTGCTGGCGCACCAGTGCAGGCGTACCGCCG
CGCCGTGCCTGTGCGTCACGTGGTGCGCAGCTCAGGTGAGGCTCTTAATA
AGCAGCTTCTCTTCTTTAGTTCATTGTGAGTGGTAGAATCAACTGTGTTT
CTGATTGAGTACTTCAATTTGTCTACAAATGCGTCGCTTGGTGCGCAGCT
TGGGTGAGGCCCTTACGAAGCCACATACTTTGACGAATTGTTGCACCACA
TCAACTTGCAGTGCACTCGTGACTTATTGTTTATGGCGGTTGTGGTACGT
GTACGCACCGGAACTCAGATTCTGGAAGATAAAGAGTGGAAAGGCCATCA
TCTGCAGATTGATAATTCTTGCGATGACAATCTGACAAGTGGTGTCGGCT
ACGCTTGTCACATCTTGAAGTTAAGTAGTTGAGGTTCTGCATGACCTGAA
CCCGTTTGTTCCTGCACTCCTCTGTCTTGCATCGAAATGCAGCCGTTCCC
AGATGCCTCACATGAGGCAAGGGCACAGCAGACAAGGGCACGTATGACAG
AGTTCTGGCGGATACTCCGTGCAACAAGTCACATCCAGAGGCTGACCATA
TGTGACTTGAAGGTTCGCATAGCCTGATCCCTTCTTCTTCTTCCCCTTTC
TCTTACCGCCATCGCTGCAGCTGTTCCCGACTCTGGGCCCAGACGCGGGA
GGCAAGGGCACAGTGGACAAAGGCATTTTTGATAGAGTTTTGGCAGATGT
ACCATGCAGTGGCGATGGCACTGCACGCAAGGCACCTAACATCTGGCGTA
TGTGGAGCACGCATGGTCCGCTCACACTGCACCCGCTGCAGCTGTCCATT
GCCGCTAGGGGCGCAGCCCTGCTCAAGGTAAGGATTTGCTGCAGTTACAG
ACATTCACTGATGAATCATGAAATGAATAGTGATCTGCAGCTGTCCATCG
GGCGCAGCTTTGCTCAAGGTGCGGATGTGCTCTGCAGTTACAGGCATTCA
CTGATGAATCATGAATGAAACATGAATGAATGGGGTGGTGGGTGGTCCAT
GGCATGGAAAGCTTGGCGGTAGCGTCGGCGTGAAAAACGCATACTTCTAA
GTACATACGGCACACATGCTGACATTGTTAGATTTGTAGATGATGCATTC
ACATTGTGGCGCAGCCACTTTTTTGCTTTGACCATGTAAGGTCAGTGGCT
TGCTCCTGGTCATTGTACCTGCTTGCGGAAGTCAGGGGTAGGGTTACGGT
CGGGCTGAATAACGGCAACGTGAGTGATCAACACTCAACTGCTTCCGCCC
TCTGTGATGGCTGGGTTAGCATTAGGGTTAGGGTTAGGGTTAGGGTTAGG
GTAAGGGTTAGAGTCAGGGTACGATTTGTGCCCTGCAGCACATGCAGCCC
CATTGCACTCGTCACCATCGCTACTTGTGGGCGTCTCAACACGCATTTGT
GCTAGTACTTTGTACAATCAGCTTCCGTGGTGTGTTATGTTGCCTTTCTT
GCAACCGTCTACTTCTGATGCACCATGAGTCAGCAAAGTGAGCTTGCTTC
TGACCGCGAGTGTTGTAACCCTGCATCGGCAGGTCGGCGGTTTGATGGTC
TACTCAACGTGCTCGCTGTGCCCATACGAAGACGAAGCGGTGATAGCTGA
GCTGCTGCGAAGGGGGAAGGGGGGTCTTGAACTGGTGGACGTGACCCATG
AACTGCCAGGGCTCAAGCGCAGGAAGGGGATCAGCAGCTGGGTGGTGCTG
GATGACAAGACGCAGGTATGTAGGTATGCAGCTGCCTAAACTTCAACTAC
TTCAAAGTGAAGTCCAATTTAGGTTATCTTTGCGAGTACATGTGTGTGTT
TGCATGTTTGAAAACATATACACATGCACAGTACGTGGATGATAAAAACA
TAACTGCAGGTATGGAGTTGCTCCGGGTAGGTATGATGAGAAGTGTGGTT
TCGGGTTCTCCGTTTTACTGGATGTGTAGTCTACATGTGCAAGTGTGTAG
GTATGCAGCTGGTCTAGAGGTGTGTTTTTGGGTTCTCCGTTTGCCAGATG
TGTGCATGTGTGGCCATTATGTGCATTCATGCCTGCGATCACACCCACAA
ATATCCCTATGCCACATGCTGTTGTCAGCAGCTGGCAATGCTGCCACCTA
AGACACAGCTATGTAGGTATGTCATACTGCAATTATGCCATTGTGCTTAC
GGTTCCATCATACCTGTCATACACCATCGACCGGCTCAGTGCACGTACGA
CTCATACAGCGTTGGAGGTTTCGTGCATGTGGGTGTACTCTGTTACTGGT
TGCCGCCTGGTGGTGGACGATGAGAATACAGCACGGTATGTATGCATGTC
TCGCGAATTCATGTATACCAAAGTAGTTCACGACGCTGCGTACCTCAACT
TCACTTCAACAGTGTTGACGCACCATTTCCTGGCCCTTGGAACTCGGCCG
TCATGGCCATGAAGGCGGACGCGTGCGCACAAACTTCAACTTCACTTCAA
GTGTGTTGACGCACCATCACTTGACTTTATCAACTCTGTCAACCTGGCCA
CGAAGGCGGAGGCGCGAGCGCAGAAGCGCAACAGGGGCCACAAGAAACAC
AACAGGCACGCGCAGAGGCCCGCCAATGATGCCACACCCGCTGCTGACAG
TGGCGCCGCAGCCACCGCCGCAGCCGCGGCCAGTGCCGCTTCTTCAACAA
GTGACGTGCCAGACAGCACTAGTGACACCCCTAACAAGGGGGTGGGGGCA
GAGGAGGTTGAGGCGCTGACACCAGAGGAGAAGGAGTTAGAGAGGCTGGG
GGCGCTGTTTCCACGTGAAGGGGGGCAGTTTGCGGGGCGCGATGCGCTCA
TGAGGGAGATGGGCAAGATGGGATACGTCGAGTACAAGAGGTGAGTCACC
GACGCACTTCGTTACTATTGAAGTTGCCGGGTGTGAGAGGTGTTTCGTCA
GAAACTGCATGCGCATGCCGCGCACGAGCATCATGTAGGGCACTATGCTT
TGCACTTGATTCATACTGCTAGAGAGGGTCCAGCCGATGTTCATCGCTGA
TCTGTGCTGCCATACATTGGTGTGCCCTCAGCTACAAGGTGTGTGCTCCA
GCTTCACTGTGAATGTGAATGTAGCTTGATTTGGCAAGTACTCGATGGAC
TTGAAACGCATCAGTGGCATGCTGACAATATCAACAGGACAGCTGGTACA
CATTGTGGCAAATGTTACAATGTACCTCATCATGTACTCCGAAACTTCAT
GACACTTCATGACACTGCGTCTGGCGCTGAGCATTTGCCACAATCTCGTC
AGCACTGGTAGCAAGCGGCACGCAAATGCAAAGCCCCCATCTTAACTCTT
GCTCTTGCAGGCTACGGCACCATGTGTCAACACAGCGATTGGCGGGGAAC
CTTCAGGGCTTCAACTCTCTCTTTTGCTCGCTCTTTGGTTGTGAAGCTCT
GAAATGTATCAGATGCCCACTTCAACACTCTCTTCTACTCTTTGCCTCAC
TTCGCTGATTAAAGCTACAGAGAAGCCTGCCGAAGACTCACTTCAACACT
GACTTCGACACTCGCTTCGTCTCTTTCTCTGTCGCTCCGTGTAGCTCTGA
AGATGTACTGAAGGCACATCCTCGTTCGCCAATTTGCTGCTACAAAGGCC
TGCTGGAGACTCGCTTCAACAATTACTTCAATACTCGCTTTGACTCCTCT
CTGTTGCTTTGTGTAGCTCTGCAGCACATCCTCGTTTGCCAATTTGAAGC
TACAAAGACTTGCCAACGACTCACTTCAACACTCGCTTGAACTCTTGCTT
CATCTCCTTCTCTGTCGCTCTGTGTAGCTCTGAAGATGTGCTGGAGGCAC
ATCCTCGTTTGCCAATTTGAAGTTACAAAGGCCTGCTGGAGACTCACTTC
AACACTTGCTTCAATACTCGCTTCAACTCTTTCTCTGCCTGTGTAGTTCT
GAAGATGTGCCGGAGGCTCTCAACCAGCGACTTCGACGCAGCTGCTTCCC
TCCAACTGCTGAGGAGGCCCCTGGTCTGCACCTGGACAGGTGTATGAGGT
TCCTTCCTCACGTGAGTCACTCAATGACTCACTCACACTGCATGACTCAC
ACTAAATGATGTGAGTTACTCAATGACTCAGTGACTCTGCCTGAATCACA
CTCCATGACTTACACAATGACTTTGAACATTTTGGTGTGCATCAGCATAC
TTTGGGACACTTCACCGCCCTGCATTTTTGGGATGTCTGTGCCTTTGTCC
AGAGCAAACAGATTTGTGTACTCTTAGGGTTGGGGTTAGGTAAGGGTAGC
TGCACCCTTCTGGGGATCCATGTGACCGCATTGACCTTGTGTCAGCTTAA
TGCTTGGCACTGGTACCATGGTGCCTATGACATGGCAAGATTTGAGGTCC
TTGACATCTACCTGTACACACTGAGCTTAGTGACAAGCATCATCTCATCG
TATGGTATCTCGTCATATGGTTTGTCAGCACATCACATGCACCCCTCTCT
TACATTATTCCACATGCGTTTGTCTACTTCACAACCTTAGGACCAGGACA
CGGGCGGCTTCTTCGTGGCCGTGCTGAGGAAAGTCTCAGCCGTCACAGCC
AACATGGTCAGCGACGCAGCA

Coding sequence (CDS) from alignment at Contig_147:212824..218444+

>mRNA_16825 ID=mRNA_16825|Name=jgi.p|Trimin1|177170|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1017bp|location=Sequence derived from alignment at Contig_147:212824..218444+ (Tribonema minus UTEX_B_3156 )
ATGACGTACAATGCGTTACTTCCTGAACTTCAAGTACTACTTCAACTTCA
TGCCGCAGGCGAGCTGGCGTACAAGCTGGGAGCTGACAGGCGTCAGATTC
GCAAGACGCCGCAGCTGAAGGCGCTGCACGAGTGGCTGCTGGCACACACA
GAGAGTGGCGCTATCACCCGTCAAGAGGAGGTCTCCATGGTACCCCCCCT
CTTCCTGGACGTCCACCCCGGCCACATCATACTAGACATGTGCGCCGCAC
CCGGATCCAAAACCGCACAGCTGCTGGAGATGGTAACTGCCCCCGCTTCA
ACTTCAACAGCGGGAGAGTCGCCTGAGGGTCTGGTGATAGCAAATGATGC
CAACAGGGACAGGGCGTATCTGCTGGCGCACCAGTGCAGGCGTACCGCCG
CGCCGTGCCTGTGCGTCACGTGGTGCGCAGCTCAGCTGTTCCCGACTCTG
GGCCCAGACGCGGGAGGCAAGGGCACAGTGGACAAAGGCATTTTTGATAG
AGTTTTGGCAGATGTACCATGCAGTGGCGATGGCACTGCACGCAAGGCAC
CTAACATCTGGCGTATGTGGAGCACGCATGGTCCGCTCACACTGCACCCG
CTGCAGCTGTCCATTGCCGCTAGGGGCGCAGCCCTGCTCAAGGTCGGCGG
TTTGATGGTCTACTCAACGTGCTCGCTGTGCCCATACGAAGACGAAGCGG
TGATAGCTGAGCTGCTGCGAAGGGGGAAGGGGGGTCTTGAACTGGTGGAC
GTGACCCATGAACTGCCAGGGCTCAAGCGCAGGAAGGGGATCAGCAGCTG
GGTGGTGCTGGATGACAAGACGCAGGTATATGTGCCGGAGGCTCTCAACC
AGCGACTTCGACGCAGCTGCTTCCCTCCAACTGCTGAGGAGGCCCCTGGT
CTGCACCTGGACAGGTGTATGAGGTTCCTTCCTCACGACCAGGACACGGG
CGGCTTCTTCGTGGCCGTGCTGAGGAAAGTCTCAGCCGTCACAGCCAACA
TGGTCAGCGACGCAGCA