mRNA_1680 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|157952
Unique Name	mRNA_1680
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|157952 vs. uniprot
Match: A0A835YTI3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTI3_9STRA)

HSP 1 Score: 753 bits (1943), Expect = 8.000e-273
Identity = 430/430 (100.00%), Postives = 430/430 (100.00%), Query Frame = 1

Query:    1 MLADRGRLDVLQWGTGAHGFRPSAEVAITAARSGQVQILQWLHEVMPWSAETTHSLLHNAAFCGQIGALDWLIAAHDWRGGXXXXXXXXXXAGELPALQFLRAHGSSWNDTTFSEAAANGQIGVMEWLVNAGAPLMVCSAYRGAARRGQRASLEWLEAAFEDETPWDESIFAYAAESGDLALLHWLHXXXXXXXXXXXXXXXXXXXXXXXXXXLAAAAPLALDVCDVAYSSYEDEAFEWAYGHGLPVAAKTKAEMAERGDVPRLEWLRARGHAFKSPPDMWAVADFGTMRWLHKHGFPCDARAMAAALERGDADAVRWLADEVGHGVCDYHACIAAAAAGDLTTLAPLHAACRAAPGGGGHDADVCAAAAAGGHMDVLQWARGAGCAWDEXXXXXXXXXXXXXXXXXXXXXRCPCDVAELVYMMQHQRLS 1290
            MLADRGRLDVLQWGTGAHGFRPSAEVAITAARSGQVQILQWLHEVMPWSAETTHSLLHNAAFCGQIGALDWLIAAHDWRGGXXXXXXXXXXAGELPALQFLRAHGSSWNDTTFSEAAANGQIGVMEWLVNAGAPLMVCSAYRGAARRGQRASLEWLEAAFEDETPWDESIFAYAAESGDLALLHWLHXXXXXXXXXXXXXXXXXXXXXXXXXXLAAAAPLALDVCDVAYSSYEDEAFEWAYGHGLPVAAKTKAEMAERGDVPRLEWLRARGHAFKSPPDMWAVADFGTMRWLHKHGFPCDARAMAAALERGDADAVRWLADEVGHGVCDYHACIAAAAAGDLTTLAPLHAACRAAPGGGGHDADVCAAAAAGGHMDVLQWARGAGCAWDEXXXXXXXXXXXXXXXXXXXXXRCPCDVAELVYMMQHQRLS
Sbjct:    1 MLADRGRLDVLQWGTGAHGFRPSAEVAITAARSGQVQILQWLHEVMPWSAETTHSLLHNAAFCGQIGALDWLIAAHDWRGGXXXXXXXXXXAGELPALQFLRAHGSSWNDTTFSEAAANGQIGVMEWLVNAGAPLMVCSAYRGAARRGQRASLEWLEAAFEDETPWDESIFAYAAESGDLALLHWLHXXXXXXXXXXXXXXXXXXXXXXXXXXLAAAAPLALDVCDVAYSSYEDEAFEWAYGHGLPVAAKTKAEMAERGDVPRLEWLRARGHAFKSPPDMWAVADFGTMRWLHKHGFPCDARAMAAALERGDADAVRWLADEVGHGVCDYHACIAAAAAGDLTTLAPLHAACRAAPGGGGHDADVCAAAAAGGHMDVLQWARGAGCAWDEXXXXXXXXXXXXXXXXXXXXXRCPCDVAELVYMMQHQRLS 430

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BLAST of jgi.p|Trimin1|157952 vs. uniprot
Match: A0A835YTK1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK1_9STRA)

HSP 1 Score: 382 bits (982), Expect = 3.830e-126
Identity = 240/385 (62.34%), Postives = 251/385 (65.19%), Query Frame = 1

Query:    4 LADRGRLDVLQWGTGAHGFRPSAEVAITAARSGQVQILQWLHEVMPWSAETTHSLLHNAAFCGQIGALDWLIAAHDWRGGXXXXXXXXXXAGELPALQFLRAHGSSWNDTTFSEAAANGQIGVMEWLVNAGAPLMVCSAYRGAARRGQRASLEWLEAAFEDETPWDESIFAYAAESGDLALLHWLHXXXXXXXXXXXXXXXXXXXXXXXXXXLAAAAPLALDVCDVAYSSYEDEAFEWAYGHGLPVAAKTKAEMAERGDVPRLEWLRARGHAFKSPPDMWAVADFGTMRWLHKHGFPCDARAMAAALERGDADAVRWLADEVGHGVCDYHACIAAAAAGDLTTLAPLHAACRAAPGGGGHDADVCAAAAAGGHMDVLQWARGAGC 1158
            LADRGRLDVLQWG GAHGFRPSAEVAITAARSGQVQILQWLHE              NAAFCG       L+A HDWR G          AGELPAL+ LRAHG+                  MEWLV+AGAP+ V  AYR A RRGQ ASLEWLE  F+ ETPWDESIFAYAAESG+LALL  LH    XXXXXXXXXXXXXXXXXXXXXX                                PVAAKT+AEMAERGDV RLEWL ARGHAF+SPPDMWAVADFGTMRWLHKH FPCD RAMAAALERGDADAVRWLADEVGHGVCDYHACIAAAA                A GG   D  VC  A   GH+DVL+WA   GC
Sbjct:  129 LADRGRLDVLQWGAGAHGFRPSAEVAITAARSGQVQILQWLHE--------------NAAFCGXXXXXXXLVARHDWRDGGAAACAAAAAAGELPALERLRAHGT------------------MEWLVDAGAPVHVLRAYRHATRRGQFASLEWLEDVFDGETPWDESIFAYAAESGNLALLDSLHADGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVAAKTEAEMAERGDVARLEWLHARGHAFQSPPDMWAVADFGTMRWLHKHRFPCDPRAMAAALERGDADAVRWLADEVGHGVCDYHACIAAAAG-------------TPARGGCAWDERVCTQARVNGHLDVLKWAVRKGC 468

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BLAST of jgi.p|Trimin1|157952 vs. uniprot
Match: A0A835ZAT3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAT3_9STRA)

HSP 1 Score: 368 bits (945), Expect = 6.700e-123
Identity = 240/430 (55.81%), Postives = 257/430 (59.77%), Query Frame = 1

Query:    1 MLADRGRLDVLQWGTGAHGFRPSAEVAITAARSGQVQILQWLHEVMPWSAETTHSLLHNAAFCGQIGALDWLIAAHDWRGGXXXXXXXXXXAGELPALQFLRAHGSSWNDTTFSEAAANGQIGVMEWLVNAGAPLMVCSAYRGAARRGQRASLEWLEAAFEDETPWDESIFAYAAESGDLALLHWLHXXXXXXXXXXXXXXXXXXXXXXXXXXLAAAAPLALDVCDVAYSSYEDEAFEWAYGHGLPVAAKTKAEMAERGDVPRLEWLRARGHAFKSPPDMWAVADFGTMRWLHKHGFPCDARAMAAALERGDADAVRWLADEVGHGVCDYHACIAAAAAGDLTTLAPLHAACRAAPGGGGHDADVCAAAAAGGHMDVLQWARGAGCAWDEXXXXXXXXXXXXXXXXXXXXXRCPCDVAELVYMMQHQRLS 1290
            MLADRGRLDVLQWGT  HGFRPSAEVA+TAARSGQVQ+LQWLHE+MPWSA                   D      D    XXXXXXXXXX          R H   W++    +AA NG +                                                                                                              +DEAFEWAYGHGLPVAAKT+A+MAERGDV RL+WLRARGHAF+SPPDMWAVADFGTMRWL +H FPCD RAMAAALERGDADAVRWL  EVGH  CD+HACIAAA+AGDL +LAPLHAACRA  GGGGHDADVCAAAAAGGHMDVL+WARGAGCAWDEXXXXXXXXXXXXXXXXXXXX RCPCDVAELVYMMQHQRLS
Sbjct:    1 MLADRGRLDVLQWGTDTHGFRPSAEVAMTAARSGQVQVLQWLHELMPWSAXXXXXXXXXXXXXXXXXXED---VFEDATXXXXXXXXXXXXXXXXXXXXXXREHECPWDERASRQAAVNGHV--------------------------------------------------------------------------------------------------------------QDEAFEWAYGHGLPVAAKTEADMAERGDVARLKWLRARGHAFQSPPDMWAVADFGTMRWLQQHRFPCDERAMAAALERGDADAVRWLVHEVGHAACDHHACIAAASAGDLASLAPLHAACRA-TGGGGHDADVCAAAAAGGHMDVLRWARGAGCAWDEXXXXXXXXXXXXXXXXXXXXQRCPCDVAELVYMMQHQRLS 316

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BLAST of jgi.p|Trimin1|157952 vs. uniprot
Match: A0A835ZE15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE15_9STRA)

HSP 1 Score: 340 bits (872), Expect = 1.240e-108
Identity = 220/433 (50.81%), Postives = 243/433 (56.12%), Query Frame = 1

Query:    4 LADRGRLDVLQWGTGAHGFRPSAEVAITAARSGQVQILQWLHEVMPWSAETTHSLLHNAAFCGQIGALDWLIAAHDWRGGXXXXXXXXXXAGELPALQFLRAHGSSWNDTTFSEAAANGQIGVMEWLVNAGAPLMVCSAYRGAARRGQRASLEWLEAAFEDETPWDESIFAYAAESGDLALLHWLHXXXXXXXXXXXXXXXXXXXXXXXXXXLAAAAPLALDVCDVAYSSYEDEAFEWAYGHGLPVAAKTKAEMAERGDVPRLEWLRARGHAFKSPPDMWAVADFGTMRWLHKHGFPCDARAMAAALERGDADAVRWLADEVGHGVCDYHACIAAAAAGDLTTLAPLHAACRAAPGGGG----HDADVCAAAAAGGHMDVLQWARGAGCAWDEXXXXXXXXXXXXXXXXXXXXXRCPCDVAELVYMMQHQRLS 1290
            LA+RGRL VLQWG  AHGFRPSAE AI A R G+V +L WLHE+ PW+ +TTH LL NAA CGQ G ++WL     WR G           G+LPALQ LRAH   W+  TFSEAAANG++ VMEW + A AP+ V  A+R AAR G RASLEWLEA F   TPWD  +FA AAESGD+ LL WL                               A                                                    GH F SPP +WA AD  TMRWLH HG  CDARAMAAALER DA A RWL   VG    D+ AC+AAA AGDL +LAPLHAACRAA G       HD  VCAAAAAGGH  VL+WAR AGC    XXXXXXXXXXXXXXXXXXXXX  PC  AEL  +   Q LS
Sbjct:  151 LAERGRLGVLQWGAAAHGFRPSAEAAIAAVRGGRVDVLHWLHELAPWTVQTTHCLLKNAATCGQTGVVEWLFGKRGWRDGAAAACAAAAATGQLPALQLLRAHYGRWDHNTFSEAAANGRLEVMEWAMRARAPVAVDDAHRRAARYGARASLEWLEARFYG-TPWDADVFACAAESGDVELLRWL------------------------------CARGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGHVFDSPPALWAAADLATMRWLHAHGLTCDARAMAAALERADATATRWLLYAVGGAAWDHRACVAAAFAGDLASLAPLHAACRAAGGXXXXXXXHDEAVCAAAAAGGHARVLRWARAAGCXXXXXXXXXXXXXXXXXXXXXXXXXXXPCGAAELQCLRALQTLS 552

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BLAST of jgi.p|Trimin1|157952 vs. uniprot
Match: A0A835YS69_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS69_9STRA)

HSP 1 Score: 322 bits (824), Expect = 9.400e-102
Identity = 233/400 (58.25%), Postives = 266/400 (66.50%), Query Frame = 1

Query:   61 RPSAEVAITAARSGQVQILQWLHEVMPWSAETTHSLLHNAAFCGQIGALDWLIAAHDWRGGXXXXXXXXXXAGELPALQFLRAHGSSWNDTTFSEAAANGQIGVMEWLVNAGAPLMVCSAYRGAARRGQRASLEWLEAAFEDETPWDESIFAYAAESGDLALLHWLHXXXXXXXXXXXXXXXXXXXXXXXXXXLAAAAPLALDVCDVAYSSYEDEAFEWAYGHGLPVAAKTKAEMAERGDVPRLEWLRARGHAFKSPPDMWAVADFGTMRWLHKHGFPCDARAMAAALERGDADAVRWLADEVGHGVCDYHACIAAAAAGDLTTLAPLHAACRAAPGGGGHDADVCAAAAAGGHMDVLQWARGAGCAWDEXXXXXXXXXXXXXXXXXXXXXRCPCDVAEL 1260
            R S EVAI AAR G+V +LQWLHE++P+S +TTHSLL +AA  GQI ALDW+IA HDWRGGXXXXXXXXXXAG   AL  LR HGS+W+   F EAAA+GQ  +M++LV+  APL V  AYR AA+ GQR SLEWLE AF+ ETPWDE++F+ AA SG + LL  LH    XXXXXXXXXXXXXXXXXXXXXX                             HGLPV+ K + ++A  GD  RLEWLR RGH F +PPDMWA  D    +WLH H FP D RA    +     DAV W+  EVG G  D  +CIAAA  GD+T L+ LH  CRA   GGGHD         GGHMDVL+WARG  CAWD  XXXXXXXXXXXXXXXXXXXX CPC  AEL
Sbjct:  129 RSSGEVAIAAARGGRVHVLQWLHELVPFSTQTTHSLLKSAASSGQIDALDWIIAGHDWRGGXXXXXXXXXXAGRFSALVHLRRHGSAWDHDAFEEAAAHGQTDMMDFLVSEDAPLSVDDAYRRAAQCGQRESLEWLEVAFDGETPWDENVFSCAAISGSVELLRCLHAERCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHGLPVSGKLEVKLALEGDDERLEWLRVRGHWFHNPPDMWAAGDNIVKQWLHDHRFPYDTRAAIGVI---GTDAVDWILYEVGSGAWDERSCIAAAFEGDMTALSLLHTTCRAT--GGGHDXXXXXXXXXGGHMDVLRWARGEKCAWDGRXXXXXXXXXXXXXXXXXXXXXCPCGEAEL 523

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BLAST of jgi.p|Trimin1|157952 vs. uniprot
Match: A0A836CCJ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCJ3_9STRA)

HSP 1 Score: 309 bits (792), Expect = 2.190e-98
Identity = 208/360 (57.78%), Postives = 236/360 (65.56%), Query Frame = 1

Query:   88 AARSGQVQILQWLHEVMPWSAETTHSLLHNAAFCGQIGALDWLIAAHDWRGGXXXXXXXXXXAGELPALQFLRAHGSSWNDTTFSEAAANGQIGVMEWLVNAGAPL--MVCSAYRGAARRGQRASLEWLEAAFEDETPWDESIFAYAAESGDLALLHWLHXXXXXXXXXXXXXXXXXXXXXXXXXXLAAAAPLALDVCDVAYSSYEDEAFEWAYGHGLPVAAKTKAEMAERGDVPRLEWLRARGHAFKSPPDMWAVADFGTMRWLHKHGFPCDARAMAAALERGDADAVRWLADEVGHGVCDYHACIAAAAAGDLTTLAPLHAACRAAPGGGGHDADVCAAAAAGGHMDVLQWARGAGCA 1161
            AAR G V +LQWLHE+ PW+ +TTH +L NAA           +A HDWRGG  XXXXXXXXAG+L ALQ L   GS  +   FSEAAA GQ+ +MEW +  GAPL   +  A R A RRGQRASLEWLE+ F    PWDE IF+ AA SGD+ LL WLH    XXXXXXXXXXXXXXXXXXXXXX                                  A KT+  MA RGDV RL+WLRARGH F SPPDMWAVADF TMRWLHKH FPC+A+AM AAL  G+A+A+ WL  EVG    D  AC+AAA+ GD T+LA LH  CRA   GGGHD +VCAAAAAGG+ DVL+WARG GCA
Sbjct:    1 AARGGHVNVLQWLHELAPWNTQTTHDVLKNAAXXXXXXXXXXXMATHDWRGGGAXXXXXXXXAGKLGALQHLLRCGSEVDHNAFSEAAACGQVELMEWALVEGAPLPLRLRDACRRATRRGQRASLEWLESTF-FAAPWDEDIFSCAAYSGDMTLLQWLHERGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGKTEVAMAARGDVSRLDWLRARGHVFHSPPDMWAVADFSTMRWLHKHEFPCNAQAMHAAL--GNAEAMLWLLYEVGSSAWDGSACVAAASEGDPTSLALLHMTCRAT--GGGHDQEVCAAAAAGGYGDVLRWARGEGCA 355

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BLAST of jgi.p|Trimin1|157952 vs. uniprot
Match: A0A835YXM8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXM8_9STRA)

HSP 1 Score: 251 bits (640), Expect = 5.100e-76
Identity = 216/419 (51.55%), Postives = 239/419 (57.04%), Query Frame = 1

Query:    4 LADRGRLDVLQWGTGAHGFRPSAEVAITAARSGQVQILQWLHEVMPWSAETTHSLLHNAAFCGQIGALDWLIAAHDWRGGXXXXXXXXXXAGELPALQFLRAHGSSWNDTTFSEAAANGQIGVMEWLVNAGAPLMVCSAYRGAARRGQRASLEWLEAAFEDETPWDESIFAYAAESGDLALLHWLHXXXXXXXXXXXXXXXXXXXXXXXXXXLAAAAPLALDVCDVAYSSYEDEAFEWAYGHGLPVAAKTKAEMAERGDVPRLEWLRARGHAFKSPPDMWAVADFGTMRWLHKHGFPCDARAMAAALERGDADAVRWLADEVGHGVCDYHACIAAAAAGDLTTLAPLHAACRAAPGGGGHDADVCAAAAAGGHMDVLQWARGAGCAWDEXXXXXXXXXXXXXXXXXXXXXRCPCDVAEL 1260
            LA+ GRLDVLQW   AH F P+ +VA  AA  G   +LQWLHE+MP S +T HSLL  AA  G I ALDW++A+HDW GGXXXXXXXXXXAG+L  L  LR HGS+W+   F +AAANGQ  VMEWL+ A APL V                  LEA F DETPWDE++F+ AA SG++ LL WLH    XXXXXXXXXXXXXXXXXXXXXX                                      + EM ER DV RLEWLRARGHA                                            W          D  +C AAA AGDLTTLA LH  CRA   GGGHDA+VCAAAAAGGH DVL+WARG GCAW  XXXXXXXXXXXXXXXXXXXXX  PC  AEL
Sbjct:   18 LAEHGRLDVLQWARDAHNFCPTVDVATAAACGGHTHVLQWLHELMPCSTQTAHSLLKIAASSGHIDALDWVVASHDWHGGXXXXXXXXXXAGKLAVLVRLRVHGSAWDHDAFEQAAANGQTEVMEWLICADAPLRVDDXXXXXXXXXXXXXXXXLEAVF-DETPWDENVFSCAAGSGNVELLRWLHAGGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIEMVERDDVSRLEWLRARGHA------------------------------------------TAW----------DERSCAAAAFAGDLTTLALLHTTCRAT--GGGHDAEVCAAAAAGGHSDVLRWARGEGCAWXXXXXXXXXXXXXXXXXXXXXXXXXPCGEAEL 381

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BLAST of jgi.p|Trimin1|157952 vs. uniprot
Match: A0A836CMY9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMY9_9STRA)

HSP 1 Score: 245 bits (625), Expect = 2.410e-75
Identity = 140/228 (61.40%), Postives = 154/228 (67.54%), Query Frame = 1

Query:    4 LADRGRLDVLQWGTGAHGFRPSAEVAITAARSGQVQILQWLHEVMPWSAETTHSLLHNAAFCGQIGALDWLIAAHDWRGGXXXXXXXXXXAGELPALQFLRAHGSSWNDTTFSEAAANGQIGVMEWLVNAGAPLMVCSAYRGAARRGQRASLEWLEAAFEDETPWDESIFAYAAESGDLALLHWLHXXXXXXXXXXXXXXXXXXXXXXXXXXLAAAAPLALDVCDVAY 687
            LA++GRLDVLQWG  AH F PSA+VAI AA  G V +LQWLHE+MPWS  TTHSLL NAA  GQI ALDWL+A HDW GGXXXXXXXXXXAGEL AL  LR  GS+W+   F EAAANGQ  VMEWLV A APL V  AYR AA  GQRASLEWLE  F+  TPWD ++F+ AAESGD A L WL+                           AA AP+ALD CDVAY
Sbjct:   32 LAEQGRLDVLQWGRDAHNFCPSADVAIAAACGGHVHVLQWLHELMPWSTHTTHSLLENAACSGQIDALDWLVAGHDWHGGXXXXXXXXXXAGELAALVRLRVQGSAWDHNAFEEAAANGQTEVMEWLVIARAPLRVNDAYRRAAWCGQRASLEWLEDVFDRVTPWDANVFSRAAESGDAAQLRWLYERGCPRDDHASRLAAIERRVEVLQWLHAANAPMALDACDVAY 259

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BLAST of jgi.p|Trimin1|157952 vs. uniprot
Match: A0A835YIJ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIJ4_9STRA)

HSP 1 Score: 247 bits (631), Expect = 8.650e-75
Identity = 157/271 (57.93%), Postives = 185/271 (68.27%), Query Frame = 1

Query:    4 LADRGRLDVLQWGTGAHGFRPSAEVAITAARSGQVQILQWLHEVMPWSAETTHSLLHNAAFCGQIGALDWLIAAHDWRGGXXXXXXXXXXAGELPALQFLRAHGSSWNDTTFSEAAANGQIGVMEWLVNAGAPLMVCSAYRGAARRGQRASLEWLEAAFEDETPWDESIFAYAAESGDLALLHWLHXXXXXXXXXXXXXXXXXXXXXXXXXXLAAAAPLALDVCDVAYSSYEDEAFEWAYGHGLPVAA-----KTKAEMAERGDVPRLEWL 801
            LA++GRLDVLQWG  AH F PSAEVAI AAR G+V +LQWLHE+MP+S +TTHSLL +AA  GQI AL+W+IA HDWRGG          AG L AL  LR HG +W+   F  AAA+G+  VM+ LV+   PL V  AYR AAR GQR SLEWLE  F+  T WDE++F+ AA SG + LL WLH   XXXXXXXXXXXXXXXXXXXXXXX      +ALDVCDVAY   + EAF+WAY HGLPV +     ++    A  GD+  L  L
Sbjct:   32 LAEQGRLDVLQWGRDAHNFCPSAEVAIAAARGGRVHVLQWLHELMPFSTQTTHSLLESAASSGQIDALNWVIAGHDWRGGGAPACAAAAAAGRLAALVHLRRHGCAWDHDAFEVAAAHGRTDVMDVLVSEDPPLSVDDAYRRAARCGQRESLEWLEVVFDGGTLWDENVFSCAAISGSVELLRWLHAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMALDVCDVAYEYDQFEAFKWAYSHGLPVGSGAWDERSCVAAASEGDLTALSLL 302

[Close]

BLAST of jgi.p|Trimin1|157952 vs. uniprot
Match: A0A835ZCE3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCE3_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.740e-28
Identity = 71/122 (58.20%), Postives = 81/122 (66.39%), Query Frame = 1

Query:  799 LRARGHAFKSPPDMWAVADFGTMRWLHKHGFPCDARAMAAALERGDADAVRWLADEVGHGVCDYHACIAAAAAGDLTTLAPLHAACRAAPGGGGHDADVCAAAAAGGHMDVLQWARGAGCAW 1164
            L+  G   ++  +  A A  G  R  H HGFPCD RAM AAL  GDA AVR L  +VG    D  AC+AAAAAGDLT+LA LHA CRA   GGGHD DVC AAAAGG+ D ++WARG GCAW
Sbjct:  274 LQLMGDTVRAACNTAAGACAGCTRTDHAHGFPCDERAMHAALASGDAAAVRLLLFDVGSDAWDGSACVAAAAAGDLTSLALLHATCRAT--GGGHDEDVCVAAAAGGYSDAMRWARGEGCAW 393

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|157952 vs. uniprot

BLAST of jgi.p|Trimin1|157952 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13


Match Name	E-value	Identity	Description
A0A835YTI3_9STRA	8.000e-273	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YTK1_9STRA	3.830e-126	62.34	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZAT3_9STRA	6.700e-123	55.81	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZE15_9STRA	1.240e-108	50.81	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YS69_9STRA	9.400e-102	58.25	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CCJ3_9STRA	2.190e-98	57.78	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YXM8_9STRA	5.100e-76	51.55	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CMY9_9STRA	2.410e-75	61.40	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YIJ4_9STRA	8.650e-75	57.93	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZCE3_9STRA	1.740e-28	58.20	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_4	contig	Contig_4:1317600..1318892 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|157952\|e_gw1.4.109.1
Description	Ankyrin repeats (many copies)
COG category	S
Max annot lvl	121069\|Pythiales
EggNOG OGs	2AMK4@1\|root,2RZCC@2759\|Eukaryota,1MKAU@121069\|Pythiales
Evalue	0.000219
Seed ortholog	36331.EPrPI00000017324
Hectar predicted targeting category	other localisation
TranscriptId	158274
Track	FilteredModels1
ProteinId	157952

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|157952	gene_1680	Tribonema minus UTEX_B_3156	gene	Contig_4 1317600..1318892 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_1680_1	exon_1680_1	Tribonema minus UTEX_B_3156	exon	Contig_4 1317600..1318892 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_1680	CDS_1680	Tribonema minus UTEX_B_3156	CDS	Contig_4 1317600..1318892 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|157952	Trimin1\|157952\|e_gw1.4.109.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_4 1317600..1318892 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_4:1317600..1318892-
coding sequence from alignment at Contig_4:1317600..1318892-

spliced messenger RNA

>mRNA_1680 ID=mRNA_1680|Name=jgi.p|Trimin1|157952|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1293bp|location=Sequence derived from alignment at Contig_4:1317600..1318892- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTTGCTGACCGTGGCCGGCTCGATGTTCTGCAGTGGGGCACAGGCGC
CCATGGCTTCCGCCCCTCTGCAGAGGTGGCAATCACAGCAGCACGCAGCG
GTCAAGTGCAGATCCTGCAGTGGCTGCACGAGGTCATGCCCTGGAGCGCA
GAGACCACCCACAGTCTCCTGCACAACGCTGCGTTCTGCGGCCAGATCGG
CGCGCTCGATTGGCTCATTGCAGCGCATGACTGGCGCGGCGGCGGCGCTG
CGGCATGCGCCGCCGCTGCTGCGGCGGGTGAGCTCCCCGCGCTCCAGTTC
CTGCGCGCGCACGGCAGTTCGTGGAACGACACCACATTCTCTGAGGCCGC
GGCCAACGGGCAGATTGGGGTGATGGAGTGGCTCGTCAACGCCGGCGCGC
CGCTGATGGTTTGCAGTGCCTACCGGGGTGCGGCGCGGCGCGGGCAGCGC
GCGTCGCTGGAGTGGCTCGAAGCCGCCTTTGAAGACGAGACGCCGTGGGA
CGAGAGCATCTTCGCGTATGCTGCGGAGAGCGGCGATCTGGCGCTGCTGC
ACTGGCTCCACGAGCACGAGTGCCCGTGGGACGAACGCGCAAGCCGCCAG
GCCGCCGTCAACGGCCACGTACAGGTGCTGGAGTGGCTGCTCGCTGCCGC
GGCGCCGCTTGCGCTCGACGTGTGCGACGTCGCGTACAGCAGCTACGAGG
ACGAGGCCTTTGAGTGGGCGTACGGCCACGGCCTGCCCGTCGCGGCCAAG
ACGAAGGCGGAGATGGCCGAGCGCGGTGACGTGCCGCGGCTGGAGTGGCT
GCGCGCCAGGGGGCACGCGTTCAAGAGCCCCCCGGACATGTGGGCGGTCG
CGGACTTCGGCACCATGCGGTGGCTGCACAAGCACGGCTTCCCTTGCGAC
GCGCGCGCCATGGCAGCGGCGCTCGAGCGCGGCGACGCCGACGCGGTGCG
CTGGCTGGCGGACGAAGTCGGCCACGGCGTGTGCGACTACCACGCGTGCA
TCGCTGCGGCCGCCGCTGGCGACCTGACGACGCTGGCGCCGCTGCACGCG
GCGTGCCGCGCCGCGCCGGGCGGCGGCGGGCACGACGCGGACGTCTGCGC
GGCAGCTGCGGCGGGCGGGCACATGGACGTGCTGCAGTGGGCGCGCGGCG
CGGGGTGCGCGTGGGACGAGAGGGTGTGCGCGCACGCGCGGGTGAACGGG
CACTTGGAGGTGCTCAGGTGGGCGGTCAGCCAGCGCTGCCCGTGCGATGT
GGCGGAGCTGGTGTACATGATGCAGCATCAGCGCCTGTCGTAG

protein sequence of jgi.p|Trimin1|157952

>Trimin1|157952|e_gw1.4.109.1 ID=Trimin1|157952|e_gw1.4.109.1|Name=jgi.p|Trimin1|157952|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=431bp
MLADRGRLDVLQWGTGAHGFRPSAEVAITAARSGQVQILQWLHEVMPWSA
ETTHSLLHNAAFCGQIGALDWLIAAHDWRGGGAAACAAAAAAGELPALQF
LRAHGSSWNDTTFSEAAANGQIGVMEWLVNAGAPLMVCSAYRGAARRGQR
ASLEWLEAAFEDETPWDESIFAYAAESGDLALLHWLHEHECPWDERASRQ
AAVNGHVQVLEWLLAAAAPLALDVCDVAYSSYEDEAFEWAYGHGLPVAAK
TKAEMAERGDVPRLEWLRARGHAFKSPPDMWAVADFGTMRWLHKHGFPCD
ARAMAAALERGDADAVRWLADEVGHGVCDYHACIAAAAAGDLTTLAPLHA
ACRAAPGGGGHDADVCAAAAAGGHMDVLQWARGAGCAWDERVCAHARVNG
HLEVLRWAVSQRCPCDVAELVYMMQHQRLS*

mRNA from alignment at Contig_4:1317600..1318892-

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_1680 ID=mRNA_1680|Name=jgi.p|Trimin1|157952|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1293bp|location=Sequence derived from alignment at Contig_4:1317600..1318892- (Tribonema minus UTEX_B_3156 )
ATGCTTGCTGACCGTGGCCGGCTCGATGTTCTGCAGTGGGGCACAGGCGC
CCATGGCTTCCGCCCCTCTGCAGAGGTGGCAATCACAGCAGCACGCAGCG
GTCAAGTGCAGATCCTGCAGTGGCTGCACGAGGTCATGCCCTGGAGCGCA
GAGACCACCCACAGTCTCCTGCACAACGCTGCGTTCTGCGGCCAGATCGG
CGCGCTCGATTGGCTCATTGCAGCGCATGACTGGCGCGGCGGCGGCGCTG
CGGCATGCGCCGCCGCTGCTGCGGCGGGTGAGCTCCCCGCGCTCCAGTTC
CTGCGCGCGCACGGCAGTTCGTGGAACGACACCACATTCTCTGAGGCCGC
GGCCAACGGGCAGATTGGGGTGATGGAGTGGCTCGTCAACGCCGGCGCGC
CGCTGATGGTTTGCAGTGCCTACCGGGGTGCGGCGCGGCGCGGGCAGCGC
GCGTCGCTGGAGTGGCTCGAAGCCGCCTTTGAAGACGAGACGCCGTGGGA
CGAGAGCATCTTCGCGTATGCTGCGGAGAGCGGCGATCTGGCGCTGCTGC
ACTGGCTCCACGAGCACGAGTGCCCGTGGGACGAACGCGCAAGCCGCCAG
GCCGCCGTCAACGGCCACGTACAGGTGCTGGAGTGGCTGCTCGCTGCCGC
GGCGCCGCTTGCGCTCGACGTGTGCGACGTCGCGTACAGCAGCTACGAGG
ACGAGGCCTTTGAGTGGGCGTACGGCCACGGCCTGCCCGTCGCGGCCAAG
ACGAAGGCGGAGATGGCCGAGCGCGGTGACGTGCCGCGGCTGGAGTGGCT
GCGCGCCAGGGGGCACGCGTTCAAGAGCCCCCCGGACATGTGGGCGGTCG
CGGACTTCGGCACCATGCGGTGGCTGCACAAGCACGGCTTCCCTTGCGAC
GCGCGCGCCATGGCAGCGGCGCTCGAGCGCGGCGACGCCGACGCGGTGCG
CTGGCTGGCGGACGAAGTCGGCCACGGCGTGTGCGACTACCACGCGTGCA
TCGCTGCGGCCGCCGCTGGCGACCTGACGACGCTGGCGCCGCTGCACGCG
GCGTGCCGCGCCGCGCCGGGCGGCGGCGGGCACGACGCGGACGTCTGCGC
GGCAGCTGCGGCGGGCGGGCACATGGACGTGCTGCAGTGGGCGCGCGGCG
CGGGGTGCGCGTGGGACGAGAGGGTGTGCGCGCACGCGCGGGTGAACGGG
CACTTGGAGGTGCTCAGGTGGGCGGTCAGCCAGCGCTGCCCGTGCGATGT
GGCGGAGCTGGTGTACATGATGCAGCATCAGCGCCTGTCGTAG

Coding sequence (CDS) from alignment at Contig_4:1317600..1318892-

>mRNA_1680 ID=mRNA_1680|Name=jgi.p|Trimin1|157952|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1293bp|location=Sequence derived from alignment at Contig_4:1317600..1318892- (Tribonema minus UTEX_B_3156 )
ATGCTTGCTGACCGTGGCCGGCTCGATGTTCTGCAGTGGGGCACAGGCGC
CCATGGCTTCCGCCCCTCTGCAGAGGTGGCAATCACAGCAGCACGCAGCG
GTCAAGTGCAGATCCTGCAGTGGCTGCACGAGGTCATGCCCTGGAGCGCA
GAGACCACCCACAGTCTCCTGCACAACGCTGCGTTCTGCGGCCAGATCGG
CGCGCTCGATTGGCTCATTGCAGCGCATGACTGGCGCGGCGGCGGCGCTG
CGGCATGCGCCGCCGCTGCTGCGGCGGGTGAGCTCCCCGCGCTCCAGTTC
CTGCGCGCGCACGGCAGTTCGTGGAACGACACCACATTCTCTGAGGCCGC
GGCCAACGGGCAGATTGGGGTGATGGAGTGGCTCGTCAACGCCGGCGCGC
CGCTGATGGTTTGCAGTGCCTACCGGGGTGCGGCGCGGCGCGGGCAGCGC
GCGTCGCTGGAGTGGCTCGAAGCCGCCTTTGAAGACGAGACGCCGTGGGA
CGAGAGCATCTTCGCGTATGCTGCGGAGAGCGGCGATCTGGCGCTGCTGC
ACTGGCTCCACGAGCACGAGTGCCCGTGGGACGAACGCGCAAGCCGCCAG
GCCGCCGTCAACGGCCACGTACAGGTGCTGGAGTGGCTGCTCGCTGCCGC
GGCGCCGCTTGCGCTCGACGTGTGCGACGTCGCGTACAGCAGCTACGAGG
ACGAGGCCTTTGAGTGGGCGTACGGCCACGGCCTGCCCGTCGCGGCCAAG
ACGAAGGCGGAGATGGCCGAGCGCGGTGACGTGCCGCGGCTGGAGTGGCT
GCGCGCCAGGGGGCACGCGTTCAAGAGCCCCCCGGACATGTGGGCGGTCG
CGGACTTCGGCACCATGCGGTGGCTGCACAAGCACGGCTTCCCTTGCGAC
GCGCGCGCCATGGCAGCGGCGCTCGAGCGCGGCGACGCCGACGCGGTGCG
CTGGCTGGCGGACGAAGTCGGCCACGGCGTGTGCGACTACCACGCGTGCA
TCGCTGCGGCCGCCGCTGGCGACCTGACGACGCTGGCGCCGCTGCACGCG
GCGTGCCGCGCCGCGCCGGGCGGCGGCGGGCACGACGCGGACGTCTGCGC
GGCAGCTGCGGCGGGCGGGCACATGGACGTGCTGCAGTGGGCGCGCGGCG
CGGGGTGCGCGTGGGACGAGAGGGTGTGCGCGCACGCGCGGGTGAACGGG
CACTTGGAGGTGCTCAGGTGGGCGGTCAGCCAGCGCTGCCCGTGCGATGT
GGCGGAGCTGGTGTACATGATGCAGCATCAGCGCCTGTCGTAG