mRNA_1677 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|157811
Unique NamemRNA_1677
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|157811 vs. uniprot
Match: A0A835YUN8_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUN8_9STRA)

HSP 1 Score: 360 bits (923), Expect = 9.510e-126
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 1 
Query:    1 MPLDAQPLEPRHITALRHLHLRLRGDGQAVAVRPLKGLVPTLSVAPSDTVGDIARRLQEAAGLGYHIAFKTGTSKFLQDASTLADCYGEKLIPWESAVRLSALRADITLRFHTGNTITLRAIAARARVRELKQLIEQVEGIPPEEQRLLWCGRELEDGRCLRDYRVLPQLHEPTLHLALR 540
            MPLDAQPLEPRHITALRHLHLRLRGDGQAVAVRPLKGLVPTLSVAPSDTVGDIARRLQEAAGLGYHIAFKTGTSKFLQDASTLADCYGEKLIPWESAVRLSALRADITLRFHTGNTITLRAIAARARVRELKQLIEQVEGIPPEEQRLLWCGRELEDGRCLRDYRVLPQLHEPTLHLALR
Sbjct:    1 MPLDAQPLEPRHITALRHLHLRLRGDGQAVAVRPLKGLVPTLSVAPSDTVGDIARRLQEAAGLGYHIAFKTGTSKFLQDASTLADCYGEKLIPWESAVRLSALRADITLRFHTGNTITLRAIAARARVRELKQLIEQVEGIPPEEQRLLWCGRELEDGRCLRDYRVLPQLHEPTLHLALR 180
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BLAST of jgi.p|Trimin1|157811 vs. uniprot
Match: X6L731_RETFI (Polyubiquitin (Fragment) n=2 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6L731_RETFI)

HSP 1 Score: 97.1 bits (240), Expect = 3.280e-21
Identity = 61/163 (37.42%), Postives = 88/163 (53.99%), Query Frame = 1 
Query:   52 HLHLRLRGDGQAVAVRPLKGLVPTLSVAPSDTVGDIARRLQEAAGLGYHIAFKTGTSKFLQDASTLADCYGEKLIPWESAVRLSALRADITLRFHTGNTITLRAIAARARVRELKQLIEQVEGIPPEEQRLLWCGRELEDGRCLRDYRVLPQLHEPTLHLALR 540
            HL LRLRG    + V+ L G   TL V P+DT+ ++  ++Q+  G+           K L+D  TL+D   +K       +RL      I ++  TG TITL  +     ++ +K  I+  EGIPPE+QRL++ G++LEDGR L DY +     E TLHL LR
Sbjct:  112 HLVLRLRGGAMQIFVKTLTGKTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAMQIFVKTLTGKTITL-DVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLSDYNIQK---ESTLHLVLR 270
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BLAST of jgi.p|Trimin1|157811 vs. uniprot
Match: Q84YH2_BIGNA (Polyubiquitin n=4 Tax=Chlorarachniophyceae TaxID=29197 RepID=Q84YH2_BIGNA)

HSP 1 Score: 96.7 bits (239), Expect = 9.400e-21
Identity = 62/163 (38.04%), Postives = 88/163 (53.99%), Query Frame = 1 
Query:   52 HLHLRLRGDGQAVAVRPLKGLVPTLSVAPSDTVGDIARRLQEAAGLGYHIAFKTGTSKFLQDASTLADCYGEKLIPWESAVRLSALRADITLRFHTGNTITLRAIAARARVRELKQLIEQVEGIPPEEQRLLWCGRELEDGRCLRDYRVLPQLHEPTLHLALR 540
            HL LRLRG    + V+ L G   TL V  SDT+  + +++Q+  G+           K L+D  TLAD   +K       +RL      I ++  TG TITL  + +   +  +KQ I+  EGIPP++QRL++ G++LEDGR L DY +     E TLHL LR
Sbjct:   70 HLVLRLRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVKTLTGKTITL-DVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK---ESTLHLVLR 228
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BLAST of jgi.p|Trimin1|157811 vs. uniprot
Match: X6MMQ8_RETFI (Polyubiquitin n=5 Tax=Foraminifera TaxID=29178 RepID=X6MMQ8_RETFI)

HSP 1 Score: 97.1 bits (240), Expect = 3.860e-20
Identity = 61/163 (37.42%), Postives = 88/163 (53.99%), Query Frame = 1 
Query:   52 HLHLRLRGDGQAVAVRPLKGLVPTLSVAPSDTVGDIARRLQEAAGLGYHIAFKTGTSKFLQDASTLADCYGEKLIPWESAVRLSALRADITLRFHTGNTITLRAIAARARVRELKQLIEQVEGIPPEEQRLLWCGRELEDGRCLRDYRVLPQLHEPTLHLALR 540
            HL LRLRG    + V+ L G   TL V P+DT+ ++  ++Q+  G+           K L+D  TL+D   +K       +RL      I ++  TG TITL  +     ++ +K  I+  EGIPPE+QRL++ G++LEDGR L DY +     E TLHL LR
Sbjct:  273 HLVLRLRGGAMQIFVKTLTGKTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAMQIFVKTLTGKTITL-DVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLSDYNIQK---ESTLHLVLR 431
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BLAST of jgi.p|Trimin1|157811 vs. uniprot
Match: A0A7S1UDB6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDB6_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 4.260e-20
Identity = 63/163 (38.65%), Postives = 90/163 (55.21%), Query Frame = 1 
Query:   52 HLHLRLRGDGQAVAVRPLKGLVPTLSVAPSDTVGDIARRLQEAAGLGYHIAFKTGTSKFLQDASTLADCYGEKLIPWESAVRLSALRADITLRFHTGNTITLRAIAARARVRELKQLIEQVEGIPPEEQRLLWCGRELEDGRCLRDYRVLPQLHEPTLHLALR 540
            HL LRLRG G  + V+ L G   TL V PSDT+ ++ +++Q+  G+           K L+D  TL+D   +K       +RL      I ++  TG TITL  +     +  +KQ I+  EGIPP++QRL++ G++LEDGR L DY +     E TLHL LR
Sbjct:   52 HLVLRLRG-GMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG-GMQIFVKTLTGKTITL-DVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK---ESTLHLVLR 208
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BLAST of jgi.p|Trimin1|157811 vs. uniprot
Match: A0A2P5A628_PARAD (Ubiquitin n=1 Tax=Parasponia andersonii TaxID=3476 RepID=A0A2P5A628_PARAD)

HSP 1 Score: 92.4 bits (228), Expect = 5.140e-20
Identity = 66/179 (36.87%), Postives = 94/179 (52.51%), Query Frame = 1 
Query:    4 PLDAQPLEPRHITALRHLHLRLRGDGQAVAVRPLKGLVPTLSVAPSDTVGDIARRLQEAAGLGYHIAFKTGTSKFLQDASTLADCYGEKLIPWESAVRLSALRADITLRFHTGNTITLRAIAARARVRELKQLIEQVEGIPPEEQRLLWCGRELEDGRCLRDYRVLPQLHEPTLHLALR 540
            P  A+PL  R    +R   LRLRG G  + V+ L G   TL V  SDT+ ++  ++Q+  G+           K L+D  TLAD   +K       +RL      I ++  TG TITL  + +   +  +K  I+  EGIPP++QRL++ G++LEDGR L DY +     E TLHL LR
Sbjct:   32 PSRARPLPWRWRAQIRSTXLRLRG-GMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG-GMQIFVKTLTGKTITLE-VESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK---ESTLHLVLR 204
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BLAST of jgi.p|Trimin1|157811 vs. uniprot
Match: A0A1C3KWV5_9APIC (Polyubiquitin, putative n=3 Tax=Plasmodium ovale TaxID=36330 RepID=A0A1C3KWV5_9APIC)

HSP 1 Score: 95.5 bits (236), Expect = 5.370e-20
Identity = 61/163 (37.42%), Postives = 88/163 (53.99%), Query Frame = 1 
Query:   52 HLHLRLRGDGQAVAVRPLKGLVPTLSVAPSDTVGDIARRLQEAAGLGYHIAFKTGTSKFLQDASTLADCYGEKLIPWESAVRLSALRADITLRFHTGNTITLRAIAARARVRELKQLIEQVEGIPPEEQRLLWCGRELEDGRCLRDYRVLPQLHEPTLHLALR 540
            HL LRLRG G  + V+ L G   TL V  SDT+ ++  ++Q+  G+           K L+D  TL+D   +K       +RL      I ++  TG TITL  + +   +  +K  I+  EGIPP++QRL++ G++LEDGR L DY +     E TLHL LR
Sbjct:   68 HLVLRLRGGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGMQIFVKTLTGKTITL-DVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK---ESTLHLVLR 226
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BLAST of jgi.p|Trimin1|157811 vs. uniprot
Match: A0A1D1XIL8_9ARAE (Polyubiquitin (Fragment) n=2 Tax=Eukaryota TaxID=2759 RepID=A0A1D1XIL8_9ARAE)

HSP 1 Score: 91.3 bits (225), Expect = 5.800e-20
Identity = 62/163 (38.04%), Postives = 90/163 (55.21%), Query Frame = 1 
Query:   52 HLHLRLRGDGQAVAVRPLKGLVPTLSVAPSDTVGDIARRLQEAAGLGYHIAFKTGTSKFLQDASTLADCYGEKLIPWESAVRLSALRADITLRFHTGNTITLRAIAARARVRELKQLIEQVEGIPPEEQRLLWCGRELEDGRCLRDYRVLPQLHEPTLHLALR 540
            HL LRLRG G  + V+ L G   TL V  SDT+  + +++Q+  G+           K L+D  TL+D   +K       +RL      I ++  TG TITL  + +   + ++KQ I+  EGIPP++QRL++ G++LEDGR L DY +     E TLHL LR
Sbjct:    9 HLVLRLRG-GMQIFVKTLTGKTITLEVESSDTIDQVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG-GMQIFVKTLTGKTITLE-VESSDTIDQVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK---ESTLHLVLR 165
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BLAST of jgi.p|Trimin1|157811 vs. uniprot
Match: A0A669CJ08_ORENI (Ubiquitin B n=2 Tax=Ovalentaria TaxID=1489908 RepID=A0A669CJ08_ORENI)

HSP 1 Score: 94.7 bits (234), Expect = 7.510e-20
Identity = 62/163 (38.04%), Postives = 88/163 (53.99%), Query Frame = 1 
Query:   52 HLHLRLRGDGQAVAVRPLKGLVPTLSVAPSDTVGDIARRLQEAAGLGYHIAFKTGTSKFLQDASTLADCYGEKLIPWESAVRLSALRADITLRFHTGNTITLRAIAARARVRELKQLIEQVEGIPPEEQRLLWCGRELEDGRCLRDYRVLPQLHEPTLHLALR 540
            HL LRLRG G  + V+ L G   TL V PSDT+ ++  ++Q+  G+           K L+D  TL+D   +K       +RL      I ++  TG TITL  +     +  +K  I+  EGIPP++QRL++ G++LEDGR L DY +     E TLHL LR
Sbjct:   53 HLVLRLRG-GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGENMQIFVKTLTGKTITLE-VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK---ESTLHLVLR 210
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BLAST of jgi.p|Trimin1|157811 vs. uniprot
Match: L8H0Y2_ACACA (Polyubiquitin, putative n=3 Tax=Acanthamoeba TaxID=5754 RepID=L8H0Y2_ACACA)

HSP 1 Score: 92.4 bits (228), Expect = 7.840e-20
Identity = 63/163 (38.65%), Postives = 90/163 (55.21%), Query Frame = 1 
Query:   52 HLHLRLRGDGQAVAVRPLKGLVPTLSVAPSDTVGDIARRLQEAAGLGYHIAFKTGTSKFLQDASTLADCYGEKLIPWESAVRLSALRADITLRFHTGNTITLRAIAARARVRELKQLIEQVEGIPPEEQRLLWCGRELEDGRCLRDYRVLPQLHEPTLHLALR 540
            HL LRLRG G  + V+ L G   TL V  SDT+ ++ +++Q+  G+           K L+D  TLAD   +K       +RL      I ++  TG TITL  + +   +  +KQ I+  EGIPP++QRL++ G++LEDGR L DY +     E TLHL LR
Sbjct:   68 HLVLRLRG-GMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG-GMQIFVKTLTGKTITLE-VESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK---ESTLHLVLR 224
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157811 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YUN8_9STRA9.510e-126100.00Ubiquitin-like domain-containing protein n=1 Tax=T... [more]
X6L731_RETFI3.280e-2137.42Polyubiquitin (Fragment) n=2 Tax=Reticulomyxa filo... [more]
Q84YH2_BIGNA9.400e-2138.04Polyubiquitin n=4 Tax=Chlorarachniophyceae TaxID=2... [more]
X6MMQ8_RETFI3.860e-2037.42Polyubiquitin n=5 Tax=Foraminifera TaxID=29178 Rep... [more]
A0A7S1UDB6_9STRA4.260e-2038.65Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A2P5A628_PARAD5.140e-2036.87Ubiquitin n=1 Tax=Parasponia andersonii TaxID=3476... [more]
A0A1C3KWV5_9APIC5.370e-2037.42Polyubiquitin, putative n=3 Tax=Plasmodium ovale T... [more]
A0A1D1XIL8_9ARAE5.800e-2038.04Polyubiquitin (Fragment) n=2 Tax=Eukaryota TaxID=2... [more]
A0A669CJ08_ORENI7.510e-2038.04Ubiquitin B n=2 Tax=Ovalentaria TaxID=1489908 RepI... [more]
L8H0Y2_ACACA7.840e-2038.65Polyubiquitin, putative n=3 Tax=Acanthamoeba TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_4contigContig_4:1306136..1308830 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|157811|e_gw1.4.354.1
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko04121,ko04147
KEGG ModuleM00177,M00179
KEGG Pathwayko03010,ko03320,map03010,map03320
KEGG koko:K02977,ko:K08770,ko:K12158
GOsGO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0019538,GO:0019941,GO:0030163,GO:0030312,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051603,GO:0071704,GO:0071944,GO:1901564,GO:1901565,GO:1901575
Descriptioncellular macromolecule catabolic process
COG categoryO
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5272@1|root,KOG0001@2759|Eukaryota
Evalue4.12e-22
Seed ortholog227086.JGI_V11_46610
Hectar predicted targeting categoryother localisation
TranscriptId158133
TrackFilteredModels1
ProteinId157811
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157811gene_1677Tribonema minus UTEX_B_3156 geneContig_4 1306136..1308830 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157811Trimin1|157811|e_gw1.4.354.1Tribonema minus UTEX_B_3156 polypeptideContig_4 1306136..1308830 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_1677_3exon_1677_3Tribonema minus UTEX_B_3156 exonContig_4 1306136..1306345 -
exon_1677_2exon_1677_2Tribonema minus UTEX_B_3156 exonContig_4 1306667..1306873 -
exon_1677_1exon_1677_1Tribonema minus UTEX_B_3156 exonContig_4 1308708..1308830 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_1677CDS_1677Tribonema minus UTEX_B_3156 CDSContig_4 1308708..1308830 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_1677 ID=mRNA_1677|Name=jgi.p|Trimin1|157811|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=540bp|location=Sequence derived from alignment at Contig_4:1306136..1308830- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCCCTTGACGCGCAGCCACTCGAGCCGCGACACATCACCGCGCTTCG
TCATCTCCACCTCCGTCTTCGCGGCGACGGTCAGGCCGTGGCCGTACGCC
CACTCAAAGGCCTCGTCCCGACCCTGTCCGTAGCACCTTCGGACACCGTT
GGCGACATAGCGCGGAGGCTGCAGGAAGCGGCTGGACTCGGATACCACAT
TGCCTTCAAGACGGGCACAAGCAAATTTCTCCAGGACGCGAGTACGCTGG
CGGACTGCTACGGCGAGAAGCTGATTCCGTGGGAGAGCGCGGTGCGCCTG
TCGGCGCTGCGCGCGGACATCACGCTGCGCTTCCACACGGGCAACACGAT
CACGCTGCGGGCGATCGCGGCGCGCGCGCGCGTGCGCGAGCTCAAGCAGC
TCATCGAGCAGGTCGAGGGCATCCCTCCGGAGGAGCAGCGCCTGCTGTGG
TGCGGCCGTGAGCTCGAGGACGGCCGCTGCCTGCGCGACTACCGCGTCCT
GCCGCAGCTGCACGAGCCGACGCTGCACCTTGCGCTGCGG
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protein sequence of jgi.p|Trimin1|157811

>Trimin1|157811|e_gw1.4.354.1 ID=Trimin1|157811|e_gw1.4.354.1|Name=jgi.p|Trimin1|157811|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=180bp
MPLDAQPLEPRHITALRHLHLRLRGDGQAVAVRPLKGLVPTLSVAPSDTV
GDIARRLQEAAGLGYHIAFKTGTSKFLQDASTLADCYGEKLIPWESAVRL
SALRADITLRFHTGNTITLRAIAARARVRELKQLIEQVEGIPPEEQRLLW
CGRELEDGRCLRDYRVLPQLHEPTLHLALR
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mRNA from alignment at Contig_4:1306136..1308830-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_1677 ID=mRNA_1677|Name=jgi.p|Trimin1|157811|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2695bp|location=Sequence derived from alignment at Contig_4:1306136..1308830- (Tribonema minus UTEX_B_3156 )
ATGCCCCTTGACGCGCAGCCACTCGAGCCGCGACACATCACCGCGCTTCG
TCATCTCCACCTCCGTCTTCGCGGCGACGGTCAGGCCGTGGCCGTACGCC
CACTCAAAGGCCTCGTCCCGACCGTACTTGTACGCGACGTCGCAAGCGTC
GAACGCGAGCGGCGCGCCCGCGGCGTGCAGCCACTCCAGCGCCTCCATGT
CGCCGCGCGTGGCGGCGACGCGGCTCGCGCGCGCATCCCACGCGCACCCG
CGCGCGCGCAGCCAGCGCAGCAGCGCCAGATCGCCGCTCTTCGCTGCGCA
CGAGAAGACGTCCGCGTCGCGCGGCGTCGCGTTGAAGTTGGCGTCCATCC
ACTCCAGCGACGCGCGCTGCCCGTGCCGCGCGGCGCGCCGGTACGCGGCG
TTAACTCTCAGCGGCGCGCCGGCGGTGACGAGCCACTCCATCACCCCAGT
GTGACCGTTCGCCGCAGCCTCCTCGAATGTGTCGTGGTCCCACGCGCTGC
CGTGCACGTGCAAGCGCACGAGCGCGTGGAGCTCGCCCGCCGCAGCGGTG
GCGGCGCAGGCCGCAGCGCCGCCGCTGCGCAAGTCATGCCTCGCAAGAAG
CCAGTCGATCACGCTGATCTGGCCGCATGAAGCGGCGTTCTCGAGGAGAG
CATGGGTGGTCTCCGTCGTCCAGGGCGCGAGCTCGTGCAGCCACTGCAGG
ATGTGCACGTGGCCGCTGCGTGCTGCTGTGATTGCCACCTCCGCAGTGGG
GCGGAAGCCATGGGTGTCTGTGCCCCACTGCAGTACATCGAGCCGGCCAA
GCGCAGCAAGGGTCCTCCAGTACGAAGCGCCGAGGTAGCTAGGGTGTAGA
CTCAGCATCAGGGGCGTCGCGTACTCGACCACCTCCCGAGGAGCGCCCGC
CAATGCTCTCATTGCCTCTCCTTTGTGGTGCTGCCACACTATGCAATTGC
TGCCAGCGAGGGCGAGTTGAGCCATGGGCAGGGTGGCGAACCAATCTGCT
GAGATGGCAGTCGTTGCCTGGTCGAAATGCATCCTGTAAGTAGCCAGGAT
ATTTTGGTGATGGCGCTGCACAGGAACCTCCCCGGCCCGAGAAAGCTGAG
GCAAGGGCCCCAGATGAACTGATGGGGATCTAATGCAGCAGCAGCGCCTG
CAGAGTGGCACTTGATGCCCTCAACAGCAGCACGTTTGCGGCAGGGCTCC
TTCTGTGTTGCTAAAACGTGCTTGCCTTCAGAGCCGACAATCTCACGATC
GACGACTGCTTGCTTGCACCTCATGCTGGGACCGGCGCGATTTGAAATCC
ACCAGAACTGCATCAGGCGCTGGGGCCCTGCGTGCCGGCCTCCTGAAGAA
TGCTCCCATTGTCCACGGAGTGGATGTACTGTGCTGTGTTTTGAAATCCG
AGGCGCGAAACGCGCAACGGACACCGAACAACAACATCAACTCTCATTCT
AGAGTGAGGGCGCTGGCGCGGCATCCTGGCTAGACCCAAGCAGACATGGG
TCAGAGCGAGAGCATCCCGATCAGTCCAAAAGCAGACATGGGTCAGAGTG
AAAGCTCAGTCAAGACGCACCGGCTCGCGAATGGCGATACTTGCAGCCTG
CGGATGATAGAGCTGGGCCTGTGGCCAATGGATGAGGAAGTTGACGGCCC
TCTGGGCTGCTTCAAAGGTGTTGAGTGCATCCAGATCAGCCCCTCGGACG
CAGTGGCGGCGGTGAAGACTCGCCTTCATTCCGAAACTGGGCGGACCTAA
CTAGATCTTTACTTCAGAGGTGTTAAGCTGCAGTGTGACTCTGTCATCTG
GCACTACCTGCCAGACTTGTGCGGCAGCTGCAACGGCGGCAATGAGGCCG
GCACCGCAGCGTCGCCGCTGCTGCCGCAACCCCGCCTTTCGGCCACCGTC
CTGCCAGCCTCCATTCAGCTGCTGATTGACGTAAAAGACGTGACGAGCCA
AGTCGAGCTGTCCGTAGCACCTTCGGACACCGTTGGCGACATAGCGCGGA
GGCTGCAGGAAGCGGCTGGACTCGGATACCACATTGCCTTCAAGACGGGC
ACAAGCAAATTTCTCCAGGACGCGAGTACGCTGGCGGACTGCTACGGCGA
GAAGCTGATTCCGTGGGAGAGCGCGGTGCGCCTGTCGGCGCTGCGCGCGG
ACATCACGCTGCGCGTCACCCTCGGGCGGCGCGGCCGCGCAGCGGCAGCG
GCCACCGCAGCAGGCGCGGCGTTGCCTGCTGCCGTGGGCGCCATCGACAT
GCTGGTGCACCCCTGGGAGGACGTCGGCGCGGTCGTGGAGCGCGCCGTGC
ACGCCTGCTTCCCCGCGGGCGCGCCCCCCGACGACTGGCACACGCTCACA
ACGCTCATTGGCGAAGACGTCGTGAGGAGCGCCGGCCTGCGAGGCGCCGT
CCACGAGTTCCGCGGCGCGCTGCGCCACGGCGCCGCGCTGTCGCTGCGGC
GCCACGCGGATCTCGGCGGCCCTGTGCGCATCAAGTTCCACACGGGCAAC
ACGATCACGCTGCGGGCGATCGCGGCGCGCGCGCGCGTGCGCGAGCTCAA
GCAGCTCATCGAGCAGGTCGAGGGCATCCCTCCGGAGGAGCAGCGCCTGC
TGTGGTGCGGCCGTGAGCTCGAGGACGGCCGCTGCCTGCGCGACTACCGC
GTCCTGCCGCAGCTGCACGAGCCGACGCTGCACCTTGCGCTGCGG
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Coding sequence (CDS) from alignment at Contig_4:1306136..1308830-

>mRNA_1677 ID=mRNA_1677|Name=jgi.p|Trimin1|157811|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=540bp|location=Sequence derived from alignment at Contig_4:1306136..1308830- (Tribonema minus UTEX_B_3156 )
ATGCCCCTTGACGCGCAGCCACTCGAGCCGCGACACATCACCGCGCTTCG
TCATCTCCACCTCCGTCTTCGCGGCGACGGTCAGGCCGTGGCCGTACGCC
CACTCAAAGGCCTCGTCCCGACCCTGTCCGTAGCACCTTCGGACACCGTT
GGCGACATAGCGCGGAGGCTGCAGGAAGCGGCTGGACTCGGATACCACAT
TGCCTTCAAGACGGGCACAAGCAAATTTCTCCAGGACGCGAGTACGCTGG
CGGACTGCTACGGCGAGAAGCTGATTCCGTGGGAGAGCGCGGTGCGCCTG
TCGGCGCTGCGCGCGGACATCACGCTGCGCTTCCACACGGGCAACACGAT
CACGCTGCGGGCGATCGCGGCGCGCGCGCGCGTGCGCGAGCTCAAGCAGC
TCATCGAGCAGGTCGAGGGCATCCCTCCGGAGGAGCAGCGCCTGCTGTGG
TGCGGCCGTGAGCTCGAGGACGGCCGCTGCCTGCGCGACTACCGCGTCCT
GCCGCAGCTGCACGAGCCGACGCTGCACCTTGCGCTGCGG
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