mRNA_16721 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|352987
Unique NamemRNA_16721
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|352987 vs. uniprot
Match: A0A836CNF4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNF4_9STRA)

HSP 1 Score: 424 bits (1089), Expect = 1.260e-145
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 1
Query:    1 MSTETSPWPVAVAALECRWERIEGPGPISANGTRFTSASGESGWSVYSAVLPTSGKHYFAIHFPRSRCCCTAFGFVPATCARVRHSHLISSLEYPYLVSLMGAGKGPTRALFSMTSGTPGPFTAGIYLDADARMAVMINHDDSTNPRGAVRFDDLPQPLTFVLTSPKHTMDATLLRCAVPAAGVFVGERARFVKADWLNRAEGAA 615
            MSTETSPWPVAVAALECRWERIEGPGPISANGTRFTSASGESGWSVYSAVLPTSGKHYFAIHFPRSRCCCTAFGFVPATCARVRHSHLISSLEYPYLVSLMGAGKGPTRALFSMTSGTPGPFTAGIYLDADARMAVMINHDDSTNPRGAVRFDDLPQPLTFVLTSPKHTMDATLLRCAVPAAGVFVGERARFVKADWLNRAEGAA
Sbjct:    1 MSTETSPWPVAVAALECRWERIEGPGPISANGTRFTSASGESGWSVYSAVLPTSGKHYFAIHFPRSRCCCTAFGFVPATCARVRHSHLISSLEYPYLVSLMGAGKGPTRALFSMTSGTPGPFTAGIYLDADARMAVMINHDDSTNPRGAVRFDDLPQPLTFVLTSPKHTMDATLLRCAVPAAGVFVGERARFVKADWLNRAEGAA 205          
BLAST of jgi.p|Trimin1|352987 vs. uniprot
Match: A0A836C1U8_9CHLO (Uncharacterized protein n=2 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C1U8_9CHLO)

HSP 1 Score: 145 bits (367), Expect = 8.260e-36
Identity = 80/189 (42.33%), Postives = 112/189 (59.26%), Query Frame = 1
Query:   52 RWERIEGPGPISANGTRFTSASGESGWSVYSAVLPTSGKHYFAIHFPRSRCCCTAFGFVPATCARVR-HSHLISSLEYP--YLVSLMGAGKGPTRALFSMTSGTPGPFTAGIYLDADARMAVMINHDDSTNPRGAVRFDDLPQPLTFVLTSPKHTMDATLLRCA-VPAAGVFVGERARFVKADWLNRAE 606
            RW R  G   IS +G      +G++ W+VY+  LPTSGKHY  I FP  R CC A G +P+T A V    H IS+   P  ++++L G G GP+ A  +  +G+  P  AG++LDADARM V ++H+D  N   A+R D++P P  FV+ +PKH ++  +L  A +PA GVF G+ ARF K  W    E
Sbjct:   97 RWARATGA-KISDDGLAIK--AGDASWAVYTPTLPTSGKHYMVIDFPEDRLCCIAAGVIPSTVASVPVGQHNISNAAPPCQHMIALKGIGAGPSEAT-NDRAGSAKPLQAGVFLDADARMLVFVDHNDPLNAARAIRLDNIPTPAVFVIQAPKHPLNFAILPAAQLPAGGVFTGDSARFDKVAWKREQE 281          
BLAST of jgi.p|Trimin1|352987 vs. uniprot
Match: A0A835ZKC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKC7_9STRA)

HSP 1 Score: 723 bits (1865), Expect = 2.480e-258
Identity = 509/509 (100.00%), Postives = 509/509 (100.00%), Query Frame = 1
Query:    1 MSHATNFPAYVEIWSLSVAQMVGLQTTAAFGYRYFTKHKAVINLTGLLASVLTLFFSTWAITLWFTGLGSISCMAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRWPVWRTAAIMSIVANWIILVVVHALITTKEAPNPNLGGEARCKWTFEEYTFKLKCGTAAGXXXXXXXXXXXXXXXXXXXXXXXXXXAFSASTMRRHRVDRGGGEVAAPLAVLCWLVQLFNHLLCVSMFASLLLNNLRSLLLXXXXXXXXXXXXXXXXXXXHLCLPPYSPELXXXXXXXXXXXXXXXXXXXXLQSLRTARHPRGSFTNGTATGALTTTGVTNDSVKLYKALVTRAVVAMIVSSAYCVXXXXXXXXXXXXXXXXXSAVQXXXXXXXXXXXXXXXXXPSQLAPANNGAVRAPHTTLMTILAIIKYDIXXXXXXXXXXXXNPTSLIPVFPLAVLDNACTLESIYFAIDLSGSAGAQQRLSISQLEAALAMSGSVNLSGTDQAEGAPKSTIVSAQV 1527
            MSHATNFPAYVEIWSLSVAQMVGLQTTAAFGYRYFTKHKAVINLTGLLASVLTLFFSTWAITLWFTGLGSISCMAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRWPVWRTAAIMSIVANWIILVVVHALITTKEAPNPNLGGEARCKWTFEEYTFKLKCGTAAGXXXXXXXXXXXXXXXXXXXXXXXXXXAFSASTMRRHRVDRGGGEVAAPLAVLCWLVQLFNHLLCVSMFASLLLNNLRSLLLXXXXXXXXXXXXXXXXXXXHLCLPPYSPELXXXXXXXXXXXXXXXXXXXXLQSLRTARHPRGSFTNGTATGALTTTGVTNDSVKLYKALVTRAVVAMIVSSAYCVXXXXXXXXXXXXXXXXXSAVQXXXXXXXXXXXXXXXXXPSQLAPANNGAVRAPHTTLMTILAIIKYDIXXXXXXXXXXXXNPTSLIPVFPLAVLDNACTLESIYFAIDLSGSAGAQQRLSISQLEAALAMSGSVNLSGTDQAEGAPKSTIVSAQV
Sbjct:    1 MSHATNFPAYVEIWSLSVAQMVGLQTTAAFGYRYFTKHKAVINLTGLLASVLTLFFSTWAITLWFTGLGSISCMAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRWPVWRTAAIMSIVANWIILVVVHALITTKEAPNPNLGGEARCKWTFEEYTFKLKCGTAAGXXXXXXXXXXXXXXXXXXXXXXXXXXAFSASTMRRHRVDRGGGEVAAPLAVLCWLVQLFNHLLCVSMFASLLLNNLRSLLLXXXXXXXXXXXXXXXXXXXHLCLPPYSPELXXXXXXXXXXXXXXXXXXXXLQSLRTARHPRGSFTNGTATGALTTTGVTNDSVKLYKALVTRAVVAMIVSSAYCVXXXXXXXXXXXXXXXXXSAVQXXXXXXXXXXXXXXXXXPSQLAPANNGAVRAPHTTLMTILAIIKYDIXXXXXXXXXXXXNPTSLIPVFPLAVLDNACTLESIYFAIDLSGSAGAQQRLSISQLEAALAMSGSVNLSGTDQAEGAPKSTIVSAQV 509          
BLAST of jgi.p|Trimin1|352987 vs. uniprot
Match: A0A835Z900_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z900_9STRA)

HSP 1 Score: 145 bits (366), Expect = 8.690e-36
Identity = 76/162 (46.91%), Postives = 100/162 (61.73%), Query Frame = 1
Query:    1 MSHATNFPAYVEIWSLSVAQMVGLQTTAAFGYRYFTKHKAVINLTGLLASVLTLFFSTWAITLWFTGLGSISCMAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRWPVWRTAAIMSIVANWIILVVVHALITTKEAPNPNLGGEARCKWTFEEYTFKLK 486
            M  +T F    E+++L+V  M+ LQTT AFG RY ++++A++NLTGLLAS L+LF++ WA+T+WF G+G +SC  IQVVNG+CLSSSNALA                                 ++LV VH L++   APN  LGGE RC WTFEE TFKLK
Sbjct:    1 MGTSTAFVPLFEVFALTVTLMIALQTTVAFGKRYLSRNRALLNLTGLLASFLSLFYTLWALTIWFCGIGGLSCTVIQVVNGMCLSSSNALA---------------------------------VVLVAVHTLLSGYAAPNTALGGEERCVWTFEEATFKLK 129          
BLAST of jgi.p|Trimin1|352987 vs. uniprot
Match: D7FXM9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXM9_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 9.370e-28
Identity = 69/158 (43.67%), Postives = 97/158 (61.39%), Query Frame = 1
Query:   19 FPAYVEIWSLSVAQMVGLQTTAAFGYRYFTKHKAVINLTGLLASVLTLFFSTWAITLWFTGLGSI-SCMAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRW-PVWRTAAIMSIVANWIILVVVHALITTKEAPNPNLGGEARCKWTFEEYTFKLK 486
            F  + EI+S  V   V L T+  FG R + K  A +N+TGL AS++ + +S +A+  WF GLG +  C  +  VNG C+S+SNA  F+HLF+KADASN+ NP+W   +R   + +   NW+ L VVHAL+   E     L G  RCK+TFE  +F+LK
Sbjct:    6 FGLFFEIFSEGVVFTVALITSVCFGERCW-KRSAPLNITGLAASLIAVSYSVFALEYWFNGLGDLYDCATLAAVNGTCMSASNAFTFLHLFVKADASNQRNPKWRKFYRWVGVATTAFNWVTLAVVHALLQGTEIDG--LDGP-RCKFTFEMNSFRLK 159          
BLAST of jgi.p|Trimin1|352987 vs. uniprot
Match: A0A835Z0T7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0T7_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.990e-21
Identity = 58/153 (37.91%), Postives = 86/153 (56.21%), Query Frame = 1
Query:   28 YVEIWSLSVAQMVGLQTTAAFGYRYFTKHKAVINLTGLLASVLTLFFSTWAITLWFTGLGSISCMAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRWPVWRTAAIMSIVANWIILVVVHALITTKEAPNPNLGGEARCKWTFEEYTFKLK 486
            Y EI+ L++   +GLQ T  FG R+ T  + ++N TG LA+++   ++       F+G+G   C A+++  GL    SN  AF+HLFL+ADA N +NP+WP WR   I+  VANW+  + V  L   K +     G E RC + FEE +   K
Sbjct:   22 YFEIFCLAITFTIGLQVTFFFGERWLTMRRNMMNATGFLAAIIAAVYTLVKALHLFSGIGLSECNALRISLGLGQGLSNGFAFLHLFLRADAINAINPKWPPWRAVGIVLTVANWVCFLAVSFL--RKGSAIDQFGAE-RCVFYFEEISSNFK 171          
BLAST of jgi.p|Trimin1|352987 vs. uniprot
Match: A0A835ZCN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCN3_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.530e-19
Identity = 50/134 (37.31%), Postives = 79/134 (58.96%), Query Frame = 1
Query:   31 VEIWSLSVAQMVGLQTTAAFGYRYFTKHKAVINLTGLLASVLTLFFSTWAITLWFTGLGSI-SCMAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRWPVWRTAAIMSIVANWIILVVVHALITTKEAPNPN 429
            +E+ +L +   + LQTT  FG+RYF+  +  +NL+  LAS L L ++ + +  WF G+G+  SC  + +V G+   + N++AF+HLFL+ADA N LN +W   R   ++ + ANW  L  V    T KE   P+
Sbjct:    5 LEVAALGMLLTISLQTTVFFGHRYFSYRRVWMNLSAFLASALGLIYAAYKLGYWFAGIGAFFSCRNVMMVGGIVQGACNSMAFLHLFLRADAINSLNSKWRYLRVVGMVLVAANWAALGAVIVDRTYKEVQGPD 138          
BLAST of jgi.p|Trimin1|352987 vs. uniprot
Match: A0A835Z9N7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N7_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.290e-18
Identity = 55/156 (35.26%), Postives = 85/156 (54.49%), Query Frame = 1
Query:   19 FPAYVEIWSLSVAQMVGLQTTAAFGYRYFTKHKAVINLTGLLASVLTLFFSTWAITLWFTGLGSISCMAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRWPVWRTAAIMSIVANWIILVVVHALITTKEAPNPNLGGEARCKWTFEEYTFKLK 486
            F AY E   L+   ++ L+    FG R   +    +N+TG +AS++ + +    +  ++TG   +SC  ++++ G+   SSNALAF+HLFL+ADA NK+N  W  WR   I     NW  L+ V    T   A +    G  RCK+TF++ TF+ K
Sbjct:    6 FFAYFETTCLTTTFIIALEVGWFFGERCVLRKANAMNITGFMASLIAVTYCFLKLIYFYTGAEELSCDQLKIILGVGQGSSNALAFLHLFLRADAVNKINTHWRPWRWFGIALTALNWATLLAVCFTRTAVLATS----GSQRCKFTFDQSTFEAK 157          
BLAST of jgi.p|Trimin1|352987 vs. uniprot
Match: A0A835ZIT3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIT3_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 2.270e-15
Identity = 50/127 (39.37%), Postives = 76/127 (59.84%), Query Frame = 1
Query:  109 KHKAVINLTGLLASVLTLFFSTWAITLWFTGLGSISC-MAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRWPVWRTAAIMSIVANWIILVVVHALITTKEAPNPNLGGEARCKWTFEEYTFKLK 486
            +H  +I+ TG LASVLT+F+  + +  ++  + S     A+  V  +  ++SNALAF+HLFL+ADA N +NP WP WR   I  +VA  I+L+ V A  + +   NP  G   RC+ ++E  +F LK
Sbjct:   26 RHPLMIHWTGFLASVLTIFYCVYELCYYYVNMASRDAHCAVFKVWIVMRTASNALAFLHLFLRADAVNAINPNWPPWRRFGIALLVATLIMLIAVAATRSARLVRNPPFG--ERCEQSYEPVSFALK 150          
BLAST of jgi.p|Trimin1|352987 vs. uniprot
Match: A0A6H5L5W9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5W9_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 4.070e-15
Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 1
Query:  214 SCMAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRW-PVWRTAAIMSIVANWIILVVVHALITTKEAPNPNLGGEARCKWTFEEYTFKLK 486
            SC  +  VNG C+S+SNA  F+HLF+KADASN+ NP+W   +R   + +   NW+ L VVHAL+   +     L G  RCK+TFE  +F+LK
Sbjct:    3 SCTTLAAVNGTCMSASNAFTFLHLFVKADASNQRNPKWRKFYRWVGVATTAFNWVTLAVVHALLEGTQVDG--LDGP-RCKFTFEMNSFRLK 91          
BLAST of jgi.p|Trimin1|352987 vs. uniprot
Match: A0A836CG65_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG65_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.200e-12
Identity = 46/121 (38.02%), Postives = 65/121 (53.72%), Query Frame = 1
Query:  124 INLTGLLASVLTLFFSTWAITLWFTGL-GSISCMAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRWPVWRTAAIMSIVANWIILVVVHALITTKEAPNPNLGGEARCKWTFEEYTFKL 483
            I  T LLA+++ + ++TW +  ++ GL             G+  S SNALAF+HLFL+AD +N +NP W +WR   I   V NW +L+V  AL      P   LG  ARC   +E  +F L
Sbjct:   61 ITATALLAALICVVYTTWELAYFYAGLMAQPDTCKTATAWGVLRSISNALAFLHLFLRADVANSINPHWHMWRRVGIALTVINWALLIVAPALRRITLIPT-KLG--ARCSAQYESVSFTL 178          
BLAST of jgi.p|Trimin1|352987 vs. uniprot
Match: A0A835Z9W2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9W2_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.250e-9
Identity = 55/165 (33.33%), Postives = 78/165 (47.27%), Query Frame = 1
Query:    1 MSHATNFPAYVEIWSLSVAQMVGLQTTAAFGYRYFTKHKAVINLTGLLASVLTLFFSTWAITLWFTGLGSISCMAIQVVNGLCL-SSSNALAFVHLFLKADASNKLNPRWPVWRTAAIMSIVANWIILVVVHALITTKEA---PNPNLGGE------ARCKWTFE 465
            MSHAT F        LSV+  + ++T   FG R     +  +  TG LAS+ T  +    +  +F  +   +    Q      L  +SN+LAF+HLFL+A+A N LNP+WP WR A I   V    +L +V A    K     P+P+   E      A  KWT +
Sbjct:    1 MSHAT-FDDLFTTSCLSVSCTIAVETGWFFGMRLVYGVRNAMAWTGFLASLFTAIYCVHELCYYFVDVADQTASCAQFKAFFILRGASNSLAFLHLFLRANAVNSLNPKWPPWRRAGIALTVVTLGVLALVAATRGAKPTASPPHPSRCQEFIAPIPATLKWTLQ 164          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352987 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836CNF4_9STRA1.260e-145100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C1U8_9CHLO8.260e-3642.33Uncharacterized protein n=2 Tax=Edaphochlamys deba... [more]
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BLAST of jgi.p|Trimin1|352987 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A835ZKC7_9STRA2.480e-258100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z900_9STRA8.690e-3646.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FXM9_ECTSI9.370e-2843.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z0T7_9STRA2.990e-2137.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZCN3_9STRA1.530e-1937.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z9N7_9STRA1.290e-1835.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZIT3_9STRA2.270e-1539.37Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5L5W9_9PHAE4.070e-1546.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CG65_9STRA1.200e-1238.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z9W2_9STRA1.250e-933.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_139contigContig_139:89602..92017 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|352987|estExt_Genemark1.C_Ctg_1390010
Hectar predicted targeting categoryother localisation
TranscriptId353309
TrackFilteredModels1
ProteinId352987
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352987gene_16721Tribonema minus UTEX_B_3156 geneContig_139 89602..92017 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352987Trimin1|352987|estExt_Genemark1.C_Ctg_1390010Tribonema minus UTEX_B_3156 polypeptideContig_139 90076..92017 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_16721_4exon_16721_4Tribonema minus UTEX_B_3156 exonContig_139 89602..90500 -
exon_16721_3exon_16721_3Tribonema minus UTEX_B_3156 exonContig_139 91037..91215 -
exon_16721_2exon_16721_2Tribonema minus UTEX_B_3156 exonContig_139 91411..91576 -
exon_16721_1exon_16721_1Tribonema minus UTEX_B_3156 exonContig_139 91990..92017 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_16721UTR3_16721Tribonema minus UTEX_B_3156 three_prime_UTRContig_139 89602..90075 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_16721CDS_16721Tribonema minus UTEX_B_3156 CDSContig_139 91990..92017 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_16721 ID=mRNA_16721|Name=jgi.p|Trimin1|352987|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1272bp|location=Sequence derived from alignment at Contig_139:89602..92017- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTCAACGGAGACATCGCCCTGGCCAGTCGCAGTGGCCGCCCTGGAGTG
CCGCTGGGAACGTATAGAAGGCCCGGGACCCATCTCTGCCAACGGCACGC
GGTTCACCTCTGCGAGCGGCGAATCTGGCTGGTCCGTCTACAGCGCCGTG
CTGCCCACCAGTGGGAAGCACTACTTCGCGATCCACTTTCCGCGATCCCG
CTGCTGCTGCACGGCGTTCGGCTTCGTACCCGCCACGTGCGCACGCGTCC
GTCACAGCCACCTCATCAGCTCCCTAGAGTACCCGTACCTGGTGTCGCTC
ATGGGGGCGGGCAAGGGCCCCACGCGAGCGCTGTTCTCCATGACCAGCGG
CACGCCTGGGCCCTTCACCGCAGGCATCTACCTGGACGCGGACGCGCGCA
TGGCGGTGATGATCAACCACGACGATTCCACCAACCCGCGCGGCGCGGTG
CGCTTCGACGACCTGCCGCAGCCGCTGACGTTCGTCCTCACGAGCCCCAA
GCACACCATGGACGCGACACTGCTGCGCTGCGCCGTGCCCGCGGCGGGGG
TGTTTGTGGGCGAGCGCGCGCGCTTCGTCAAGGCGGACTGGCTGAATCGC
GCGGAGGGCGCGGCGGCAGCGGCGGACTCGGAGGAGGAGTCGGACTTTGA
GATGGAGGAGGATGAGGAAGAGGATGGTGATGAGGAGGAAGAGGAGGAAG
GGGAGGAGGAAGGGGAAGAAGAGGAAGGGGAAGAGGGAGGTGGTGCCGGT
GGTGGTGACATCGTGGTGGCGGGCGGCAATGCGGCTGGGCAGACGTAATG
GGGGAGACGGCATTGTGGTGGCGGGTGACGATGCAGCGGGGCAGACGTAG
CGGGGGCGAGGGAGGGAGTTACATTGGTGGTGGCATTGTGTAGGGGGTGG
CGATGCGGCGGAGCAGACGTATTGGAGGGGGCACGCGATGCTCGATTTCG
CGGAATGGCACTCGCGGGGTACTGCTGTGGTGAGAATGCGTGTGCTTGAT
GTGGGGACACGTACTTGATACTGTCTGAGAGACGAGCACACAAACAATTG
GAGGCGGCGTGGTCCGGTCAGTCAAACGGGTTTATTGTTTTGTTTCAGTT
AGTGTACCTGCAAGTGAGGGCAGCGGTGAAAAGGTTTGGCGGGGGGGTTA
TCACTGGAATGCATGTCAGCACCACAGGGCCGCATGTATGGGTGCATGCC
TGTTAGCGAGGAGGTTGGCGTGTCAACATTGGCGTGCACTAACAGCAAGT
GGTTGACCCCCGCGTTCTCTGC
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protein sequence of jgi.p|Trimin1|352987

>Trimin1|352987|estExt_Genemark1.C_Ctg_1390010 ID=Trimin1|352987|estExt_Genemark1.C_Ctg_1390010|Name=jgi.p|Trimin1|352987|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=266bp
MSTETSPWPVAVAALECRWERIEGPGPISANGTRFTSASGESGWSVYSAV
LPTSGKHYFAIHFPRSRCCCTAFGFVPATCARVRHSHLISSLEYPYLVSL
MGAGKGPTRALFSMTSGTPGPFTAGIYLDADARMAVMINHDDSTNPRGAV
RFDDLPQPLTFVLTSPKHTMDATLLRCAVPAAGVFVGERARFVKADWLNR
AEGAAAAADSEEESDFEMEEDEEEDGDEEEEEEGEEEGEEEEGEEGGGAG
GGDIVVAGGNAAGQT*
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mRNA from alignment at Contig_139:89602..92017-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_16721 ID=mRNA_16721|Name=jgi.p|Trimin1|352987|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2416bp|location=Sequence derived from alignment at Contig_139:89602..92017- (Tribonema minus UTEX_B_3156 )
ATGTCAACGGAGACATCGCCCTGGCCAGGTGAGCGATAATCGCAGGAATT TTGCGCGGTGCCAGATGTTGCAAGCACTGCCGCTGCCAGCTGCATGCCAA CGTGGTCAAGGTGTCACTCATATCTGCTTTTGAACGCCAGTGCTGACTTC ACGAACCCATGACTTGAATATCTGCATGAACGGGTTGATGAATGCCAGCT CCCTGGATCCGTACTGCCAGGTAGCTACAGTAAAGATCCAGGGAGCTACT CAAGCAAAGCAATCCATTTTGTGAACGACTTGCTGACATTCTTTTGCTCA TGGATTTCGTGTCTGTGCCAGGCATGCCCACCAACATTGAGCTGCATGTC CAGGTGGAGTCGGGCCCTCCCTCCCAACGCACAGTTGTCCGTGGCCCTCA GCCATCAGCTCGCGCACAGCAGCCTCGTGGCCCGGCTGCAGTCGCAGTGG CCGCCCTGGAGTGCCGCTGGGAACGTATAGAAGGCCCGGGACCCATCTCT GCCAACGGCACGCGGTTCACCTCTGCGAGCGGCGAATCTGGCTGGTCCGT CTACAGCGCCGTGCTGCCCACCAGTGGGAAGCACTACTTCGCGATCCACT TTCCGCGGTGAGTTTGCGGGCACGAGCGCGGCCTCGCCTTCAACACTTGC AGAAGGCGCGCAGATGTCCCTTCGTCAGCATTCTTGACGGCACCACCACC TCTGGGCTGTGCCTCACCGGACATCACCGCAACACACGCGCGTACGCTCG CTGAAACTCTGAAACTCCGCTGCGGCATCGCTGCGCTGCTCTCTACGCCC AGATCCCGCTGCTGCTGCACGGCGTTCGGCTTCGTACCCGCCACGTGCGC ACGCGTCCGTCACAGCCACCTCATCAGCTCCCTAGAGTACCCGTACCTGG TGTCGCTCATGGGGGCGGGCAAGGGCCCCACGCGAGCGCTGTTCTCCATG ACCAGCGGCACGCCTGGGCCCTTCACCGCAGGTCAGTGATGCTGGCGCAG CGCAGGCGCTGACTGTGCTCCTCTGCGGGGGCAACTTCAGTAGAAACTAA TGAGTCAAATGAGCGTATGCTCAGCAGAAGTGCTGGGGATCGCACACCAG GAAGCATGCGCGCGGGGCTTGTGTGCTGGGGTCTCGATGATCTCAACAAA GACGAACAGCAATGTTTTCTTCATGTACTGGTCAGGCAAGGGAGGTACAT TCAAACTGTTGCATCTCTTGCAGCGATGTCAACGTAGGCGCAGAGCTGAT CAGGGGTGCCGTGATGTGCCACCACCGCTGCATGGCACTTGTCTGTTGGT CATTGCACCAAAACAAGTGTAGAAGCCCAAAATGACGAAACAATACTTTT GAAAGGTACTTCAAAGTGTTTGTGTCAAGTGGATCACGCGCTTGTACTAT AGAAACAGGACCATCAACAACACAACCAAGCATACTCTTGTTCCGTGTAC ACCCATACATCACTTTGCCAAAGACGACCAGGCGTTCACCGCCATCGCGC CGCGCGCACTGCCGCAGGCATCTACCTGGACGCGGACGCGCGCATGGCGG TGATGATCAACCACGACGATTCCACCAACCCGCGCGGCGCGGTGCGCTTC GACGACCTGCCGCAGCCGCTGACGTTCGTCCTCACGAGCCCCAAGCACAC CATGGACGCGACACTGCTGCGCTGCGCCGTGCCCGCGGCGGGGGTGTTTG TGGGCGAGCGCGCGCGCTTCGTCAAGGCGGACTGGCTGAATCGCGCGGAG GGCGCGGCGGCAGCGGCGGACTCGGAGGAGGAGTCGGACTTTGAGATGGA GGAGGATGAGGAAGAGGATGGTGATGAGGAGGAAGAGGAGGAAGGGGAGG AGGAAGGGGAAGAAGAGGAAGGGGAAGAGGGAGGTGGTGCCGGTGGTGGT GACATCGTGGTGGCGGGCGGCAATGCGGCTGGGCAGACGTAATGGGGGAG ACGGCATTGTGGTGGCGGGTGACGATGCAGCGGGGCAGACGTAGCGGGGG CGAGGGAGGGAGTTACATTGGTGGTGGCATTGTGTAGGGGGTGGCGATGC GGCGGAGCAGACGTATTGGAGGGGGCACGCGATGCTCGATTTCGCGGAAT GGCACTCGCGGGGTACTGCTGTGGTGAGAATGCGTGTGCTTGATGTGGGG ACACGTACTTGATACTGTCTGAGAGACGAGCACACAAACAATTGGAGGCG GCGTGGTCCGGTCAGTCAAACGGGTTTATTGTTTTGTTTCAGTTAGTGTA CCTGCAAGTGAGGGCAGCGGTGAAAAGGTTTGGCGGGGGGGTTATCACTG GAATGCATGTCAGCACCACAGGGCCGCATGTATGGGTGCATGCCTGTTAG CGAGGAGGTTGGCGTGTCAACATTGGCGTGCACTAACAGCAAGTGGTTGA CCCCCGCGTTCTCTGC
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Coding sequence (CDS) from alignment at Contig_139:89602..92017-

>mRNA_16721 ID=mRNA_16721|Name=jgi.p|Trimin1|352987|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=798bp|location=Sequence derived from alignment at Contig_139:89602..92017- (Tribonema minus UTEX_B_3156 )
ATGTCAACGGAGACATCGCCCTGGCCAGTCGCAGTGGCCGCCCTGGAGTG
CCGCTGGGAACGTATAGAAGGCCCGGGACCCATCTCTGCCAACGGCACGC
GGTTCACCTCTGCGAGCGGCGAATCTGGCTGGTCCGTCTACAGCGCCGTG
CTGCCCACCAGTGGGAAGCACTACTTCGCGATCCACTTTCCGCGATCCCG
CTGCTGCTGCACGGCGTTCGGCTTCGTACCCGCCACGTGCGCACGCGTCC
GTCACAGCCACCTCATCAGCTCCCTAGAGTACCCGTACCTGGTGTCGCTC
ATGGGGGCGGGCAAGGGCCCCACGCGAGCGCTGTTCTCCATGACCAGCGG
CACGCCTGGGCCCTTCACCGCAGGCATCTACCTGGACGCGGACGCGCGCA
TGGCGGTGATGATCAACCACGACGATTCCACCAACCCGCGCGGCGCGGTG
CGCTTCGACGACCTGCCGCAGCCGCTGACGTTCGTCCTCACGAGCCCCAA
GCACACCATGGACGCGACACTGCTGCGCTGCGCCGTGCCCGCGGCGGGGG
TGTTTGTGGGCGAGCGCGCGCGCTTCGTCAAGGCGGACTGGCTGAATCGC
GCGGAGGGCGCGGCGGCAGCGGCGGACTCGGAGGAGGAGTCGGACTTTGA
GATGGAGGAGGATGAGGAAGAGGATGGTGATGAGGAGGAAGAGGAGGAAG
GGGAGGAGGAAGGGGAAGAAGAGGAAGGGGAAGAGGGAGGTGGTGCCGGT
GGTGGTGACATCGTGGTGGCGGGCGGCAATGCGGCTGGGCAGACGTAA
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