mRNA_16664 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|180529
Unique NamemRNA_16664
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|180529 vs. uniprot
Match: A0A835Z1X2_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1X2_9STRA)

HSP 1 Score: 417 bits (1072), Expect = 6.110e-143
Identity = 349/349 (100.00%), Postives = 349/349 (100.00%), Query Frame = 1 
Query:    1 MDSVRGRVYSMSGDQMGCRQLQYMLGDGGPEVATAILAEVQDHLADLMTDPFGNYLFQKLLEHVSDDERASVVFAVAHRLTMSGMSLHGTRSVQKVVELARSPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAASLEQRLSLVAQVAGRALEMMQDPFGNYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCLEKAQAPVQSAYVAELIAAPSMSALLHDQYANYVIQRALSVAPREDVALLSDVVRPHLALMRNSMSTGGRRIFIKMLKRFPEMAPTHAEIAAAEXXXXXXRHEAPLN 1047
            MDSVRGRVYSMSGDQMGCRQLQYMLGDGGPEVATAILAEVQDHLADLMTDPFGNYLFQKLLEHVSDDERASVVFAVAHRLTMSGMSLHGTRSVQKVVELARSPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAASLEQRLSLVAQVAGRALEMMQDPFGNYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCLEKAQAPVQSAYVAELIAAPSMSALLHDQYANYVIQRALSVAPREDVALLSDVVRPHLALMRNSMSTGGRRIFIKMLKRFPEMAPTHAEIAAAEXXXXXXRHEAPLN
Sbjct:    1 MDSVRGRVYSMSGDQMGCRQLQYMLGDGGPEVATAILAEVQDHLADLMTDPFGNYLFQKLLEHVSDDERASVVFAVAHRLTMSGMSLHGTRSVQKVVELARSPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAASLEQRLSLVAQVAGRALEMMQDPFGNYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCLEKAQAPVQSAYVAELIAAPSMSALLHDQYANYVIQRALSVAPREDVALLSDVVRPHLALMRNSMSTGGRRIFIKMLKRFPEMAPTHAEIAAAEXXXXXXRHEAPLN 349
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BLAST of jgi.p|Trimin1|180529 vs. uniprot
Match: A0A067BXZ3_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BXZ3_SAPPC)

HSP 1 Score: 174 bits (441), Expect = 1.030e-45
Identity = 151/325 (46.46%), Postives = 187/325 (57.54%), Query Frame = 1 
Query:    1 MDSVRGRVYSMSGDQMGCRQLQYMLGDGGPEVATAILAEVQDHLADLMTDPFGNYLFQKLLEHVSDDERASVVFAVAHRLTMSGMSLHGTRSVQKVVELARSPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAASLEQRLSLVAQVAGRALEMMQDPFGNYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCLEKAQAPVQSAYVAELIAAPSMSALLHDQYANYVIQRALSVAPREDVALLSDVVRPHLALMRNSMSTGGRRIFIKMLKRFPEM 975
            +D + GRVY+MS DQ GCR LQ  L DG  ++   I  E   HL D+M DPFGNYLFQKLLE V+D +R  +V  VA  L  + ++LHGTRSVQKVVE+  +                                                                     DAA+  Q+ +++AQV   A+++MQDP+GNYV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CLE A   ++  +V ELIA+P M  +L DQ+ANYV+QRALSVA  E    L   + PHL  M+N+  +GGRRI  ++LKRFP M
Sbjct:  272 VDDLLGRVYAMSKDQNGCRLLQEQL-DGRSDLCDVIYTEAVPHLVDMMVDPFGNYLFQKLLERVTDAQRLVIVQHVAAHLVAAALNLHGTRSVQKVVEVCATDRALASLIVSALEDDAVRLCIDSNGNHVIQRALQFLPAEFNQFVFDAVAADCTVVGTHRHGCCVLQRCVDAANERQKRAVIAQVERHAMKLMQDPYGNYVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCLELAPYELRQTFVKELIASPRMQRMLQDQFANYVVQRALSVASDEHCLCLVHAIAPHLPSMKNT--SGGRRIQARILKRFPHM 593
[Close]
BLAST of jgi.p|Trimin1|180529 vs. uniprot
Match: A0A1V9YPP5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPP5_9STRA)

HSP 1 Score: 173 bits (438), Expect = 2.130e-45
Identity = 112/326 (34.36%), Postives = 154/326 (47.24%), Query Frame = 1 
Query:    1 MDSVRGRVYSMSGDQMGCRQLQYMLGD-GGPEVATAILAEVQDHLADLMTDPFGNYLFQKLLEHVSDDERASVVFAVAHRLTMSGMSLHGTRSVQKVVELARSPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAASLEQRLSLVAQVAGRALEMMQDPFGNYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCLEKAQAPVQSAYVAELIAAPSMSALLHDQYANYVIQRALSVAPREDVALLSDVVRPHLALMRNSMSTGGRRIFIKMLKRFPEM 975
            ++ ++GRVY+MS DQ GCR LQ  L   G P++   I  E   HL D+M DPFGNYLFQKLLE V+DD+R  +V  V+  L  + ++LHGTRSVQKVVE+  +                                                                     DAA+  Q+ ++++QV   A+++MQDP+GNYV                                       CLE A   ++ A+V E+IA+P M  +L DQ+ANYV+QRALSVA  E    L   ++PHL  M+N+  +GGRRI  ++LKRFP M
Sbjct:  255 VEDLQGRVYAMSKDQNGCRLLQEQLDCVGRPDLCDVIYTEALPHLVDMMVDPFGNYLFQKLLERVADDQRLEIVKRVSPHLVAAALNLHGTRSVQKVVEVCATDRTLATIIVKALRGDAVRLCIDSNGNHVIQRALQFLPADFNQFVFDAVATDCTVVGTHRHGCCVLQRCVDAANEAQKRAVISQVELHAMKLMQDPYGNYVVQYVLDACPNDETVGLMAKCAGHVYELSVQKFSSNVVEKCLELAPYELRQAFVREIIASPRMHRMLQDQFANYVVQRALSVASDELCLDLVHAIQPHLPAMKNT--SGGRRIQARILKRFPHM 578
[Close]
BLAST of jgi.p|Trimin1|180529 vs. uniprot
Match: A0A6G0WN87_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WN87_9STRA)

HSP 1 Score: 173 bits (438), Expect = 4.580e-45
Identity = 115/328 (35.06%), Postives = 153/328 (46.65%), Query Frame = 1 
Query:    1 MDSVRGRVYSMSGDQMGCRQLQYMLG-DGGPEVATAILAEVQDHLADLMTDPFGNYLFQKLLEHVSDDERASVVFAVAHRLTMSGMSLHGTRSVQKVVELARSPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--DAASLEQRLSLVAQVAGRALEMMQDPFGNYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCLEKAQAPVQSAYVAELIAAPSMSALLHDQYANYVIQRALSVAPREDVALLSDVVRPHLALMRNSMSTGGRRIFIKMLKRFPEM 975
            +D ++GRV++MS DQ GCR LQ  L  D   ++   I AE   HL D+M DPFGNYLFQKLLE VSD +R  +V  V+  L  + ++LHGTRSVQKVVE+  S +                                                                     DAA+  Q+  ++AQV   A+++MQDP+GNYV                                       CLE A   ++  +V E+IA+P M  +L DQYANYV+QRALSVA  E+   L   +RPHLA M+N+   GGRRI  ++LKRFP +
Sbjct:  305 IDDIQGRVFAMSKDQNGCRLLQEQLEFDDRADLCDVIYAESLPHLVDMMVDPFGNYLFQKLLERVSDTQRLVIVQHVSFHLVAAALNLHGTRSVQKVVEICASSSHPLLIELIVDALKEDAVRLCIDSNGNHVIQRALQFMPSEYNQFVFDAVCAECTVVGTHRHGCCVLQRCVDAANASQKKEVIAQVEKHAMKLMQDPYGNYVVQYVLDACLPADALGVMEKCVGHVFELSIQKFSSNVIEKCLELAPDYLRQTFVKEIIASPRMYRMLQDQYANYVVQRALSVASEENCLQLVAAIRPHLASMKNTQ--GGRRIQARILKRFPHL 630
[Close]
BLAST of jgi.p|Trimin1|180529 vs. uniprot
Match: A0A485KML4_9STRA (Aste57867_9189 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KML4_9STRA)

HSP 1 Score: 171 bits (433), Expect = 3.240e-44
Identity = 115/328 (35.06%), Postives = 151/328 (46.04%), Query Frame = 1 
Query:    1 MDSVRGRVYSMSGDQMGCRQLQYMLGD-GGPEVATAILAEVQDHLADLMTDPFGNYLFQKLLEHVSDDERASVVFAVAHRLTMSGMSLHGTRSVQKVVELARSPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--DAASLEQRLSLVAQVAGRALEMMQDPFGNYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCLEKAQAPVQSAYVAELIAAPSMSALLHDQYANYVIQRALSVAPREDVALLSDVVRPHLALMRNSMSTGGRRIFIKMLKRFPEM 975
            +D ++GRVY+MS DQ GCR LQ  L      ++   I  E   HL D+M DPFGNYLFQKLLE V+D +R  VV  VA  L  + ++LHGTRSVQKVVE+  S +                                                                     DAA++ Q+  ++AQV   A+++MQDP+GNYV                                       CLE A   ++  +V E+IA P M  +L DQYANYV+QRALSVA  E+   L   +RPHLA M+N+   GGRRI  ++LKRFP +
Sbjct:  337 IDDIQGRVYAMSKDQNGCRLLQEQLDFVDRSDLCDLIYTESLPHLVDMMVDPFGNYLFQKLLERVTDAQRLVVVQHVAFHLVAAALNLHGTRSVQKVVEICASSSQPALVQLIVDALKEDAVRLCIDSNGNHVIQRALQYMPSEYNQFVFDAVCAECTVVGTHRHGCCVLQRCVDAANVVQKAEVIAQVEAHAMKLMQDPYGNYVVQYVLDACSAADALGVMQKCVTHVFELSIQKFSSNVIEKCLELAPDGLRQTFVREIIACPRMYRMLQDQYANYVVQRALSVASEENCLALVAAIRPHLASMKNTQ--GGRRIQARILKRFPHL 662
[Close]
BLAST of jgi.p|Trimin1|180529 vs. uniprot
Match: A0A833SFT8_PHYIN (Pumilio-family RNA binding repeat domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SFT8_PHYIN)

HSP 1 Score: 160 bits (406), Expect = 2.830e-41
Identity = 112/358 (31.28%), Postives = 154/358 (43.02%), Query Frame = 1 
Query:    1 MDSVRGRVYSMSGDQMGCRQLQYMLG--DGGPEVATAILAEVQDHLADLMTDPFGNYLFQKLLEHVSDDERASVVFAVAHRLTMSGMSLHGTRSVQKVVELA-------------------------------RSPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAASLEQRLSLVAQVAGRALEMMQDPFGNYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCLEKAQAPVQSAYVAELIAAPSMSALLHDQYANYVIQRALSVAPREDVALLSDVVRPHLALMRNSMSTGGRRIFIKMLKRFPEM 975
            +D ++ RV++MS DQ GCR LQ  L   D G ++   I  E  +HLA++M DPFGNYLFQKLLE V + +R  ++  V+  L  + ++LHGTRSVQKVVE+                                R  T                                                                   DAA+  Q+  ++AQV  +A+++MQDP+GNYV                                       CLEKA   V+  Y+AE+ + P M+ +L DQ+ANYV+QRAL V   E   LL   +RPHLA M+N+  +GGRRI  ++LKRFP M
Sbjct:   80 VDDIQNRVFAMSKDQNGCRLLQEQLDYEDRG-DLCDVIYQESLEHLAEMMVDPFGNYLFQKLLERVKEKQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSSSVIEEDFDEEEEGEEYGYEERPEGGKGRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIAQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQDQFANYVVQRALCVCAEEQCLLLVKAIRPHLAAMKNT--SGGRRITARILKRFPNM 434
[Close]
BLAST of jgi.p|Trimin1|180529 vs. uniprot
Match: K3W6G7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6G7_GLOUD)

HSP 1 Score: 164 bits (414), Expect = 4.140e-41
Identity = 111/353 (31.44%), Postives = 155/353 (43.91%), Query Frame = 1 
Query:    1 MDSVRGRVYSMSGDQMGCRQLQYMLG-DGGPEVATAILAEVQDHLADLMTDPFGNYLFQKLLEHVSDDERASVVFAVAHRLTMSGMSLHGTRSVQKVVELA---------------------------RSPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAASLEQRLSLVAQVAGRALEMMQDPFGNYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCLEKAQAPVQSAYVAELIAAPSMSALLHDQYANYVIQRALSVAPREDVALLSDVVRPHLALMRNSMSTGGRRIFIKMLKRFPEM 975
            ++ ++GRV++MS DQ GCR LQ  L  +   ++   I  E  DHLA++M DPFGNYLFQKLLE VS+ +R +++  V+  L  + ++LHGTRSVQKVVE+                            R                                                                      DAA+ +Q+  ++AQV  +A+++MQDP+GNYV                                       CLEKA   V+  Y+ ELI  P M+ +L DQ+ANYV+QRAL V   E    L   +RPHLA+M+N+  +GGRRI  ++LKRFP M
Sbjct:  617 VEDIQGRVFAMSKDQNGCRLLQEQLDYEDRKDLCEVIYQESLDHLAEMMVDPFGNYLFQKLLERVSEKKRLAIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSAEVIEDGMYDDLDDDAGERRPNGVRRTVNLPDIIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKQQKAEVIAQVEKQAMKLMQDPYGNYVVQYVLDSCTAEEAYGVIVKPLGNIFELSIQKFSSNVIEKCLEKAPERVRQNYIKELINCPKMNKMLQDQFANYVVQRALCVCSEEQCLQLVKSIRPHLAMMKNT--SGGRRITARILKRFPNM 967
[Close]
BLAST of jgi.p|Trimin1|180529 vs. uniprot
Match: A0A5D6XMN7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMN7_9STRA)

HSP 1 Score: 162 bits (410), Expect = 1.390e-40
Identity = 114/368 (30.98%), Postives = 158/368 (42.93%), Query Frame = 1 
Query:    1 MDSVRGRVYSMSGDQMGCRQLQYMLG-DGGPEVATAILAEVQDHLADLMTDPFGNYLFQKLLEHVSDDERASVVFAVAHRLTMSGMSLHGTRSVQKVVELA------------------------------RSPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAASLEQRLSLVAQVAGRALEMMQDPFGNYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCLEKAQAPVQSAYVAELIAAPSMSALLHDQYANYVIQRALSVAPREDVALLSDVVRPHLALMRNSMSTGGRRIFIKMLKRFPEM--------APTH 987
            ++ ++GRV+ MS DQ GCR LQ  L  +   +++  I  E  DHLA++M DPFGNYLFQKLLE V++ +R +++  V+  L  + ++LHGTRSVQKVVE+                               R                                                                      DAA+ +Q+  ++AQV  +A+++MQDP+GNYV                                       CLEKA   V+  Y+ ELI  P MS +L DQ+ANYV+QRAL V   E    L   +RPHLA M+N+  +GGRRI  ++LKRFP M        +PTH
Sbjct:  589 VEDIQGRVFVMSKDQNGCRLLQEQLDYEDRADLSDVIYHEALDHLAEMMVDPFGNYLFQKLLERVTEKKRLAIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSAEVVDXXXXXXXNAYGNEDGERPVSGVRRTVNLPDIIVEALKDDAVRLCIDSNGNHVIQRALQYMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKQQKAEVIAQVEKQAMKLMQDPYGNYVVQYVLDSCTAEEAYGVIVKPLGSIFELSVQKFSSNVIEKCLEKAPERVRQNYIKELINCPKMSKMLQDQFANYVVQRALCVCSEEQCLQLVKAIRPHLACMKNT--SGGRRITARILKRFPTMDISVDMGLSPTH 954
[Close]
BLAST of jgi.p|Trimin1|180529 vs. uniprot
Match: D0NR03_PHYIT (PUM-HD domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NR03_PHYIT)

HSP 1 Score: 160 bits (406), Expect = 4.170e-40
Identity = 112/358 (31.28%), Postives = 154/358 (43.02%), Query Frame = 1 
Query:    1 MDSVRGRVYSMSGDQMGCRQLQYMLG--DGGPEVATAILAEVQDHLADLMTDPFGNYLFQKLLEHVSDDERASVVFAVAHRLTMSGMSLHGTRSVQKVVELA-------------------------------RSPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAASLEQRLSLVAQVAGRALEMMQDPFGNYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCLEKAQAPVQSAYVAELIAAPSMSALLHDQYANYVIQRALSVAPREDVALLSDVVRPHLALMRNSMSTGGRRIFIKMLKRFPEM 975
            +D ++ RV++MS DQ GCR LQ  L   D G ++   I  E  +HLA++M DPFGNYLFQKLLE V + +R  ++  V+  L  + ++LHGTRSVQKVVE+                                R  T                                                                   DAA+  Q+  ++AQV  +A+++MQDP+GNYV                                       CLEKA   V+  Y+AE+ + P M+ +L DQ+ANYV+QRAL V   E   LL   +RPHLA M+N+  +GGRRI  ++LKRFP M
Sbjct:  460 VDDIQNRVFAMSKDQNGCRLLQEQLDYEDRG-DLCDVIYQESLEHLAEMMVDPFGNYLFQKLLERVKEKQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSSSVIEEDFDEEEEGEEYGYEERPEGGKGRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIAQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQDQFANYVVQRALCVCAEEQCLLLVKAIRPHLAAMKNT--SGGRRITARILKRFPNM 814
[Close]
BLAST of jgi.p|Trimin1|180529 vs. uniprot
Match: M4BTR1_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BTR1_HYAAE)

HSP 1 Score: 158 bits (400), Expect = 2.990e-39
Identity = 109/358 (30.45%), Postives = 152/358 (42.46%), Query Frame = 1 
Query:    1 MDSVRGRVYSMSGDQMGCRQLQYMLG-DGGPEVATAILAEVQDHLADLMTDPFGNYLFQKLLEHVSDDERASVVFAVAHRLTMSGMSLHGTRSVQKVVELA--------------------------------RSPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAASLEQRLSLVAQVAGRALEMMQDPFGNYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCLEKAQAPVQSAYVAELIAAPSMSALLHDQYANYVIQRALSVAPREDVALLSDVVRPHLALMRNSMSTGGRRIFIKMLKRFPEM 975
            ++ ++ RV++MS DQ GCR LQ  L  +   ++   I  E  +HLA++M DPFGNYLFQKLLE V++ +R  ++  V   L  + ++LHGTRSVQKVVE+                                 R  T                                                                   DAA+  Q+  ++ QV  +A+++MQDP+GNYV                                       CLEKA   V+  Y+AE+ + P M+ +L DQ+ANYV+QRAL V   E   LL   +RPHLA MRN+  +GGRRI  ++LKRFP M
Sbjct:  647 VEDIQNRVFAMSKDQNGCRLLQEQLDYEDRSDLCEVIYQESLEHLAEMMVDPFGNYLFQKLLERVNEKQRLVIIRRVGSNLVAAALNLHGTRSVQKVVEVCAISSDVIEEEYDDGDDDVNSNYGEDRREVSEQRRATSLSDVIVEALKDDAVRLCIDSNGNHVIQRALQYLKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKAQKAEVIEQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVITKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQDQFANYVVQRALCVCAEEQCLLLVKAIRPHLAAMRNT--SGGRRITARILKRFPNM 1002
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|180529 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z1X2_9STRA6.110e-143100.00Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
A0A067BXZ3_SAPPC1.030e-4546.46Uncharacterized protein n=3 Tax=Saprolegnia TaxID=... [more]
A0A1V9YPP5_9STRA2.130e-4534.36Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A6G0WN87_9STRA4.580e-4535.06Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485KML4_9STRA3.240e-4435.06Aste57867_9189 protein n=1 Tax=Aphanomyces stellat... [more]
A0A833SFT8_PHYIN2.830e-4131.28Pumilio-family RNA binding repeat domain-containin... [more]
K3W6G7_GLOUD4.140e-4131.44Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6XMN7_9STRA1.390e-4030.98Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
D0NR03_PHYIT4.170e-4031.28PUM-HD domain-containing protein n=1 Tax=Phytophth... [more]
M4BTR1_HYAAE2.990e-3930.45Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_219contigContig_219:86980..89893 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|180529|e_gw1.219.2.1
Descriptionregulation of translation
COG categoryJ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5099@1|root,KOG2049@2759|Eukaryota
Evalue8.71e-46
Seed ortholog112098.XP_008609863.1
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPumilio RNA-binding protein
Ec32 orthologEc-06_002700.1
TranscriptId180851
TrackFilteredModels1
ProteinId180529
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|180529gene_16664Tribonema minus UTEX_B_3156 geneContig_219 86980..89893 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_16664_1exon_16664_1Tribonema minus UTEX_B_3156 exonContig_219 86980..87273 +
exon_16664_2exon_16664_2Tribonema minus UTEX_B_3156 exonContig_219 88259..88549 +
exon_16664_3exon_16664_3Tribonema minus UTEX_B_3156 exonContig_219 89429..89893 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_16664CDS_16664Tribonema minus UTEX_B_3156 CDSContig_219 86980..87273 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|180529Trimin1|180529|e_gw1.219.2.1Tribonema minus UTEX_B_3156 polypeptideContig_219 86980..89893 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_16664 ID=mRNA_16664|Name=jgi.p|Trimin1|180529|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1050bp|location=Sequence derived from alignment at Contig_219:86980..89893+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGACAGCGTGCGCGGACGCGTGTACAGCATGAGCGGCGACCAGATGGG
CTGTCGGCAGCTGCAGTACATGCTGGGGGATGGGGGGCCGGAGGTGGCAA
CGGCCATACTGGCGGAGGTGCAGGACCACCTGGCCGATCTCATGACGGAC
CCTTTTGGCAACTACCTGTTCCAGAAGCTGCTGGAGCACGTGAGCGATGA
CGAGAGGGCCAGCGTGGTGTTTGCCGTCGCGCACAGGCTCACCATGTCGG
GCATGAGCCTGCACGGCACTCGCTCCGTGCAGAAGGTGGTGGAGCTGGCG
CGCTCGCCAACGGAGCGCGCAGCCGTAGTGCAGGCGCTCGAGAACTCCGT
TGTTGACCTGGCCACCAACCCCAACGGCAATCACGTCATACAGCGCGTGC
TGCAACACTTTAGCGCAGAGGGCGACAGCATGTTTGTCTATGCTGCGCTC
GAGCGGTCGTGCTTTGAGGTGGCCACGCACAGGCACGGGTGTTGCGTGGT
GCAGCGCGCGCTGGATGCGGCGTCGCTGGAGCAACGGCTGTCGCTGGTCG
CGCAAGTTGCGGGCAGGGCCCTGGAGATGATGCAGGACCCCTTTGGCAAC
TACGTGGTCCAGTACGTGCTGGACAAGTGCGCAGTGGAGGAGGTGGATGT
CATCACGCGCGCGCCCATGGGCCAGGTCGTGCACCTCTCCACGCAGAAAT
TCAGCTCCAACGTCGTGGAGAAGTGCCTGGAGAAGGCTCAGGCGCCCGTG
CAGTCTGCCTACGTGGCAGAGCTCATCGCGGCACCGAGCATGTCGGCGCT
GCTGCACGACCAGTACGCCAACTACGTCATACAGCGCGCGCTGTCGGTGG
CGCCGCGCGAGGACGTGGCGCTGCTGAGCGATGTGGTGCGGCCGCACCTG
GCGCTCATGCGCAACTCCATGTCCACGGGCGGCCGCCGCATCTTCATCAA
GATGCTCAAGCGCTTCCCCGAGATGGCGCCCACGCACGCGGAGATCGCCG
CCGCAGAGCAGCAGCAGCAGCAGCAGCGCCACGAGGCACCGCTCAATTGA
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protein sequence of jgi.p|Trimin1|180529

>Trimin1|180529|e_gw1.219.2.1 ID=Trimin1|180529|e_gw1.219.2.1|Name=jgi.p|Trimin1|180529|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=350bp
MDSVRGRVYSMSGDQMGCRQLQYMLGDGGPEVATAILAEVQDHLADLMTD
PFGNYLFQKLLEHVSDDERASVVFAVAHRLTMSGMSLHGTRSVQKVVELA
RSPTERAAVVQALENSVVDLATNPNGNHVIQRVLQHFSAEGDSMFVYAAL
ERSCFEVATHRHGCCVVQRALDAASLEQRLSLVAQVAGRALEMMQDPFGN
YVVQYVLDKCAVEEVDVITRAPMGQVVHLSTQKFSSNVVEKCLEKAQAPV
QSAYVAELIAAPSMSALLHDQYANYVIQRALSVAPREDVALLSDVVRPHL
ALMRNSMSTGGRRIFIKMLKRFPEMAPTHAEIAAAEQQQQQQRHEAPLN*
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mRNA from alignment at Contig_219:86980..89893+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_16664 ID=mRNA_16664|Name=jgi.p|Trimin1|180529|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2914bp|location=Sequence derived from alignment at Contig_219:86980..89893+ (Tribonema minus UTEX_B_3156 )
ATGGACAGCGTGCGCGGACGCGTGTACAGCATGAGCGGCGACCAGATGGG
CTGTCGGCAGCTGCAGTACATGCTGGGGGATGGGGGGCCGGAGGTGGCAA
CGGCCATACTGGCGGAGGTGCAGGACCACCTGGCCGATCTCATGACGGAC
CCTTTTGGCAACTACCTGTTCCAGAAGCTGCTGGAGCACGTGAGCGATGA
CGAGAGGGCCAGCGTGGTGTTTGCCGTCGCGCACAGGCTCACCATGTCGG
GCATGAGCCTGCACGGCACTCGCTCCGTGCAGAAGGTGGTGGAGGTGAGC
ATTGACCACTCATTACACATTGCGCATGACTTAGGGTTAGGGCTAGGGTT
ACGTGCAGGGTTAGGGTTAGGGTTAGGGTTAGAGTTACAAACAGATGAGA
TGTAGTAGAACATGGTGCGTGTACATGGCTTGTAGTTACACAAGGATCTG
CTCTCTTCCGTTATATGTCAACCACTTTTGGAGCAGCACCGAGCTTAGGG
TTAGCATGAGGGTACTAGAGCCTGTCGTCATTGCACACAAGATCGTCTAC
TCTCAGTGCTGCACGATGATGCTCAACGCGGCCTCACCGCCATACTGCCG
CATATGGAATGTGATGTATGAAGGCACATCCTTGTAGTCTGCTTGATCTT
GATCTGCAACCATTCTGAATCGAAAACTATGTAGCCTTGTGCAGAAGCGT
CGCGTAATGCACATCCCAGTCTCTCAAGCAGACCTCACACGTCACAGACA
GTGCACGCTCAGCATGTCAATGTCATGTCAATGACAATGGACAATGACAA
TGGTCATTGCCATGATTTGCACGCAGCAGCTCACGGTTATGGTTTACTGA
ATGTCACCGTTGTATCATAATGACCACGCATCATTGGTATAAGACTGTAG
CAGCATTGCTCCCCCCGTCTGGAGCTGAAATGCTGTACAAGTACATGCAT
CTGACATATATGCCTCGCATCGCATGCAAGGAGCAGCAATGGCTGAGCAC
GTACACGTTACATTGGCTCTCACTGTGTTGCGCCTCTATGTAGCATACTA
CCGTTTCACTGCTTGTTGCAATCATACGGTCCAGCTGCTGCATGCTTACT
ATGAAAGCACTGCAAAGTCTTCATGTATTTGTGTCAAAGCGACGCCGGCA
GCTTGCTGTACCTGGTTTTGCTCACCGTGTAGTTACGCTGCGCTGGTGTG
GTGTACATTGTGCATACATCATCACTCCATCATGACCTCACGCTCTGCAC
ATGCCTCAACTTCTTGCCTCAATGCTCAGCTGGCGCGCTCGCCAACGGAG
CGCGCAGCCGTAGTGCAGGCGCTCGAGAACTCCGTTGTTGACCTGGCCAC
CAACCCCAACGGCAATCACGTCATACAGCGCGTGCTGCAACACTTTAGCG
CAGAGGGCGACAGCATGTTTGTCTATGCTGCGCTCGAGCGGTCGTGCTTT
GAGGTGGCCACGCACAGGCACGGGTGTTGCGTGGTGCAGCGCGCGCTGGA
TGCGGCGTCGCTGGAGCAACGGCTGTCGCTGGTCGCGCAAGTTGCGGGCA
GGGCCCTGGAGATGATGCAGGTGGGTAGTGCTGTACTGTACTGTGTCACT
GGAGTACCTTGCGGTGGCACTTTATGGGTCAAGCATGACGCACAGCTCAA
GTATGATGCACAGCTTGTGAAACTTGACCATACATACTGGTGGTTTATAG
GGTATGCCAGATGTGCAAGCATCTAGTATGATTTGCATACAGTATGTATG
GAACATCCCACGACGCATACAGTATGTATGGAACATCCCACCTCGACGTG
ATTGGTCATATTTGATGCCATACTCCCGAATGTGACAGCAAACCTTCAAA
TGAAATTTCAACATTGACTGACATCAGAGCCGCAGGTGTATGTTGATCAG
CAGATGATCATTGCGCATATTCGCCATCACACCAATGCATTTGCCTGATA
CGTTCCCATTCAGGTTAGTCAGTATGCAATGAAGGCCTTGGTTGAGCTTC
TCTTGTATGCGCCCCACAACGTCTGTACACATGCTGCCATTTGTACACAG
TGGTCAGCGATGCTTACCATCATCAGCACCGCTCAGCGCTGTGTGTCACT
ACTCTACCCTTTCCTGTCCTCCCGAAGGCTGCAGTAACTCTGTCAACTCT
CATCCTGCCCGGGCACTCTGTCATGTAATCGGCTGTATGCTCAGCCACCT
CCACGTGTAGCGCTGCCTGATGTCTGCATGCCACAACCATCTGTGTTGTG
TCAGAATGTCAGCAAGGTAGCGCTGACTCGTCTGGAGAGTGTACCCGTTC
ATTGCGCTTGAGCTCTGCTGCAACTTGAGCATCACGACACACCCGCATCT
GCTCACGTGTCCCAATGGTGAAGTATTGGTTGATGTAGAATCGCTTCAAG
CCTATTATGCAAGGCTTTAACCGCAATGCCCTCACACCTCCATCTCCAGG
ACCCCTTTGGCAACTACGTGGTCCAGTACGTGCTGGACAAGTGCGCAGTG
GAGGAGGTGGATGTCATCACGCGCGCGCCCATGGGCCAGGTCGTGCACCT
CTCCACGCAGAAATTCAGCTCCAACGTCGTGGAGAAGTGCCTGGAGAAGG
CTCAGGCGCCCGTGCAGTCTGCCTACGTGGCAGAGCTCATCGCGGCACCG
AGCATGTCGGCGCTGCTGCACGACCAGTACGCCAACTACGTCATACAGCG
CGCGCTGTCGGTGGCGCCGCGCGAGGACGTGGCGCTGCTGAGCGATGTGG
TGCGGCCGCACCTGGCGCTCATGCGCAACTCCATGTCCACGGGCGGCCGC
CGCATCTTCATCAAGATGCTCAAGCGCTTCCCCGAGATGGCGCCCACGCA
CGCGGAGATCGCCGCCGCAGAGCAGCAGCAGCAGCAGCAGCGCCACGAGG
CACCGCTCAATTGA
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Coding sequence (CDS) from alignment at Contig_219:86980..89893+

>mRNA_16664 ID=mRNA_16664|Name=jgi.p|Trimin1|180529|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1050bp|location=Sequence derived from alignment at Contig_219:86980..89893+ (Tribonema minus UTEX_B_3156 )
ATGGACAGCGTGCGCGGACGCGTGTACAGCATGAGCGGCGACCAGATGGG
CTGTCGGCAGCTGCAGTACATGCTGGGGGATGGGGGGCCGGAGGTGGCAA
CGGCCATACTGGCGGAGGTGCAGGACCACCTGGCCGATCTCATGACGGAC
CCTTTTGGCAACTACCTGTTCCAGAAGCTGCTGGAGCACGTGAGCGATGA
CGAGAGGGCCAGCGTGGTGTTTGCCGTCGCGCACAGGCTCACCATGTCGG
GCATGAGCCTGCACGGCACTCGCTCCGTGCAGAAGGTGGTGGAGCTGGCG
CGCTCGCCAACGGAGCGCGCAGCCGTAGTGCAGGCGCTCGAGAACTCCGT
TGTTGACCTGGCCACCAACCCCAACGGCAATCACGTCATACAGCGCGTGC
TGCAACACTTTAGCGCAGAGGGCGACAGCATGTTTGTCTATGCTGCGCTC
GAGCGGTCGTGCTTTGAGGTGGCCACGCACAGGCACGGGTGTTGCGTGGT
GCAGCGCGCGCTGGATGCGGCGTCGCTGGAGCAACGGCTGTCGCTGGTCG
CGCAAGTTGCGGGCAGGGCCCTGGAGATGATGCAGGACCCCTTTGGCAAC
TACGTGGTCCAGTACGTGCTGGACAAGTGCGCAGTGGAGGAGGTGGATGT
CATCACGCGCGCGCCCATGGGCCAGGTCGTGCACCTCTCCACGCAGAAAT
TCAGCTCCAACGTCGTGGAGAAGTGCCTGGAGAAGGCTCAGGCGCCCGTG
CAGTCTGCCTACGTGGCAGAGCTCATCGCGGCACCGAGCATGTCGGCGCT
GCTGCACGACCAGTACGCCAACTACGTCATACAGCGCGCGCTGTCGGTGG
CGCCGCGCGAGGACGTGGCGCTGCTGAGCGATGTGGTGCGGCCGCACCTG
GCGCTCATGCGCAACTCCATGTCCACGGGCGGCCGCCGCATCTTCATCAA
GATGCTCAAGCGCTTCCCCGAGATGGCGCCCACGCACGCGGAGATCGCCG
CCGCAGAGCAGCAGCAGCAGCAGCAGCGCCACGAGGCACCGCTCAATTGA
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