mRNA_16631 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|177293
Unique NamemRNA_16631
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|177293 vs. uniprot
Match: A0A835Z8K8_9STRA (Cobalamin adenosyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8K8_9STRA)

HSP 1 Score: 492 bits (1267), Expect = 6.970e-176
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1 
Query:    1 MWRRTVATAVSRAPSVAHPAQRGAASYWVRALSNTPGVPPESPFTFKDIVSRRRETRLKKSLLYTRTGDKGSSSLFSGERRSKADPTFHAIGVTDELNSVTGVARQYCLMAGNGLELLLEDIQSRLLDVGAAIATPRNQSNDIKLAKTVFPAACTMELECAIDELDSKLPKLKTFILPSGGLAATHLHIARVVCRRAERTVVPLLEAGHVDPEVGRYINRLSDFYFAAARYAALAEGTEERMWIHRTDS 747
            MWRRTVATAVSRAPSVAHPAQRGAASYWVRALSNTPGVPPESPFTFKDIVSRRRETRLKKSLLYTRTGDKGSSSLFSGERRSKADPTFHAIGVTDELNSVTGVARQYCLMAGNGLELLLEDIQSRLLDVGAAIATPRNQSNDIKLAKTVFPAACTMELECAIDELDSKLPKLKTFILPSGGLAATHLHIARVVCRRAERTVVPLLEAGHVDPEVGRYINRLSDFYFAAARYAALAEGTEERMWIHRTDS
Sbjct:    1 MWRRTVATAVSRAPSVAHPAQRGAASYWVRALSNTPGVPPESPFTFKDIVSRRRETRLKKSLLYTRTGDKGSSSLFSGERRSKADPTFHAIGVTDELNSVTGVARQYCLMAGNGLELLLEDIQSRLLDVGAAIATPRNQSNDIKLAKTVFPAACTMELECAIDELDSKLPKLKTFILPSGGLAATHLHIARVVCRRAERTVVPLLEAGHVDPEVGRYINRLSDFYFAAARYAALAEGTEERMWIHRTDS 249
[Close]
BLAST of jgi.p|Trimin1|177293 vs. uniprot
Match: A0A835Z3S8_9STRA (Cob(I)alamin adenosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3S8_9STRA)

HSP 1 Score: 295 bits (754), Expect = 6.860e-98
Identity = 143/200 (71.50%), Postives = 169/200 (84.50%), Query Frame = 1 
Query:  133 TFKDIVSRRRETRLKKSLLYTRTGDKGSSSLFSGERRSKADPTFHAIGVTDELNSVTGVARQYCLMAGNGLELLLEDIQSRLLDVGAAIATPRNQSNDIKLAKTVFPAACTMELECAIDELDSKLPKLKTFILPSGGLAATHLHIARVVCRRAERTVVPLLEAGHVDPEVGRYINRLSDFYFAAARYAALAEGTEERMWI 732
            TF DI +RR   + KKS+LYT+TGDKG+SSL+SGERRSK D TF A+G +DELNSV GVAR+YC++AGNGL+ LL +IQSRL DVGA IATPR+++++ KLAKT FP  CTME+E AIDELDSKLP LKTFILPSGGLAA HLH+ARVVCRRAER+ +PL+EAG VDPEVGRY+NRLSDF FAAARYA+  EG  E  W+
Sbjct:   38 TFDDIAARRAVAKPKKSILYTKTGDKGASSLYSGERRSKTDATFQALGASDELNSVIGVAREYCVLAGNGLDELLAEIQSRLFDVGACIATPRDKASEAKLAKTAFPPKCTMEVEFAIDELDSKLPPLKTFILPSGGLAAVHLHLARVVCRRAERSAIPLVEAGEVDPEVGRYLNRLSDFLFAAARYASHVEGAPETSWV 237
[Close]
BLAST of jgi.p|Trimin1|177293 vs. uniprot
Match: A0A7S3GR11_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GR11_9STRA)

HSP 1 Score: 225 bits (574), Expect = 4.730e-70
Identity = 111/190 (58.42%), Postives = 144/190 (75.79%), Query Frame = 1 
Query:  163 ETRLKKSLLYTRTGDKGSSSLFSGERRSKADPTFHAIGVTDELNSVTGVARQYCLMAGNGLELLLEDIQSRLLDVGAAIATPRNQSNDIKLAKTVFPAACTMELECAIDELDSKLPKLKTFILPSGGLAATHLHIARVVCRRAERTVVPLLEAGHVDPEVGRYINRLSDFYFAAARYAALAEGTEERMWI 732
            + + KKS LYT+TGDKG SSL++GERRSK D  FH +G  DELN+  GVA +YC+++ NGL+ +L +IQSRL D+GAA+ATP N S++ K+A T F    T  LE  ID+LD+KLP L  F++PSGGL+ATHL++AR +CRRAER+VVPL+E   VD EVGRY+NRLSD  FAA R A++ E  EE +WI
Sbjct:   84 DVKRKKSALYTKTGDKGMSSLYNGERRSKNDMIFHTLGHQDELNAAIGVASEYCMLSNNGLQPMLSEIQSRLFDLGAAVATPVNSSSEAKVAYTKFSPKFTARLEEWIDDLDAKLPPLTNFVIPSGGLSATHLNLARTICRRAERSVVPLVEDDLVDGEVGRYLNRLSDLLFAAQRTASMRENKEEFLWI 273
[Close]
BLAST of jgi.p|Trimin1|177293 vs. uniprot
Match: A0A4D9CVG6_9STRA (Cob_adeno_trans domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVG6_9STRA)

HSP 1 Score: 214 bits (545), Expect = 5.420e-66
Identity = 107/186 (57.53%), Postives = 142/186 (76.34%), Query Frame = 1 
Query:  175 KKSLLYTRTGDKGSSSLFSGERRSKADPTFHAIGVTDELNSVTGVARQYCLMAGNGLELLLEDIQSRLLDVGAAIATPRNQSNDIKLAKTVFPAACTMELECAIDELDSKLPKLKTFILPSGGLAATHLHIARVVCRRAERTVVPLLEAGHVDPEVGRYINRLSDFYFAAARYAALAEGTEERMWI 732
            KKS +YTRTGDKG+SSL++GERR K D TF A+G TDELN+  GVA+++   A +GLE  L  IQSRLLD+GAA+ATP   S++ K  +T F     +++E  ID++DS+LP LK FILPSGG+ + HLH+AR +CRRAER+++PL+ +  VDPEVG Y+NRLSDF F AAR+AA +EG EE +W+
Sbjct:   70 KKSGIYTRTGDKGTSSLYNGERRPKNDLTFEALGATDELNAAIGVAKEHA-SAKSGLERPLSQIQSRLLDLGAAVATPAQTSDEHKRERTRFDHLHVVKVEEWIDDMDSRLPALKNFILPSGGVCSAHLHLARTICRRAERSIIPLVNSEQVDPEVGIYLNRLSDFLFVAARWAAKSEGHEETVWV 254
[Close]
BLAST of jgi.p|Trimin1|177293 vs. uniprot
Match: A0A1D1ZD89_9ARAE (Cob(I)yrinic acid a,c-diamide adenosyltransferase, mitochondrial (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1ZD89_9ARAE)

HSP 1 Score: 212 bits (540), Expect = 1.060e-65
Identity = 113/199 (56.78%), Postives = 139/199 (69.85%), Query Frame = 1 
Query:  148 VSRRRETRLKKSLLYTRTGDKGSSSLFSGERRSKADPTFHAIGVTDELNSVTGVARQYCLMAGNGLELLLEDIQSRLLDVGAAIATPRNQSNDIKLAKTVFPAACTMELECAIDELDSKLPKLKTFILPSGGLAATHLHIARVVCRRAERTVVPLLEAGHVDPEVGRYINRLSDFYFAAARYAALAEGTEERMWIHRTD 744
             + +R  + KKS +YTRTGDKG+SSL++GERRSK D  F+A+G  DELNS  GVA  YC  +GNGLE  L +IQ +L++VG+ IATPRN SN  KL+ T F       LE  ID LDS+LP LK FILPSGG ++  LH  R VCRRAERT VPL+EA  V+  VG+Y+NRLSDF+F AARYAA+ E   E  +  R D
Sbjct:   10 TTSQRSPKPKKSNVYTRTGDKGTSSLYNGERRSKDDDIFNALGTVDELNSSIGVANHYCKKSGNGLEDKLVEIQCKLIEVGSNIATPRNSSNSSKLSFTSFSEENVNNLEAWIDTLDSQLPPLKHFILPSGGESSVFLHQCRSVCRRAERTTVPLVEAEIVERSVGKYLNRLSDFFFVAARYAAMFEKQIENYYEQRRD 208
[Close]
BLAST of jgi.p|Trimin1|177293 vs. uniprot
Match: A0A397G608_9GLOM (Cob_adeno_trans domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397G608_9GLOM)

HSP 1 Score: 209 bits (532), Expect = 1.370e-64
Identity = 104/188 (55.32%), Postives = 134/188 (71.28%), Query Frame = 1 
Query:  175 KKSLLYTRTGDKGSSSLFSGERRSKADPTFHAIGVTDELNSVTGVARQYCLMAGNGLELLLEDIQSRLLDVGAAIATPRNQSNDIKLAKTVFPAACTMELECAIDELDSKLPKLKTFILPSGGLAATHLHIARVVCRRAERTVVPLLEAGHVDPEVGRYINRLSDFYFAAARYAALAEGTEERMWIHR 738
            KKS +YTRTGDKG SSL+SGE+R K D  FHA+G  DELNS  G+A  YC    NGL+  L +IQ RL+++G++IATPR+ SN+ KL+ T F      +LE  ID+LDSKLP L  FILPSGG +A  LH  R +CRRAER  VPL+E G  +  +G+Y+NRLSD++F AARYAA+ EG  E +++ R
Sbjct:   10 KKSSVYTRTGDKGYSSLYSGEKRPKYDDIFHALGTVDELNSSIGIALHYCKKVRNGLDKNLVEIQCRLIEIGSSIATPRSTSNENKLSYTSFDEENVSKLEFLIDDLDSKLPSLNNFILPSGGESAVFLHQCRSICRRAERITVPLMEEGITENTIGKYLNRLSDYFFVAARYAAMFEGQTENIYLQR 197
[Close]
BLAST of jgi.p|Trimin1|177293 vs. uniprot
Match: A0A8H4A6A3_GIGMA (CobIalamin adenosyltransferase n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H4A6A3_GIGMA)

HSP 1 Score: 210 bits (535), Expect = 3.240e-64
Identity = 109/203 (53.69%), Postives = 139/203 (68.47%), Query Frame = 1 
Query:  145 IVSRRR-----ETRLKKSLLYTRTGDKGSSSLFSGERRSKADPTFHAIGVTDELNSVTGVARQYCLMAGNGLELLLEDIQSRLLDVGAAIATPRNQSNDIKLAKTVFPAACTMELECAIDELDSKLPKLKTFILPSGGLAATHLHIARVVCRRAERTVVPLLEAGHVDPEVGRYINRLSDFYFAAARYAALAEGTEERMWIHR 738
            + S+RR       +LKKS +YTRTGDKG+SSL++GERR K D  FH++G  DELNS  GVA  YC   GNGL+  L +IQ +L+++G+ IATPR+ SN+ KL+ T F       LE  ID  DS+LP LK FILPSGG +A  LH  R +CRRAER  +PL+EAG  D  VG+Y+NRLSDF+F AARYAA+ E   E ++  R
Sbjct:   58 LASQRRMVGCQSPKLKKSAIYTRTGDKGTSSLYNGERRPKYDDIFHSLGTVDELNSSIGVANYYCKKTGNGLDEKLVEIQCKLIEIGSNIATPRSSSNESKLSYTSFDDEIVTTLESWIDHYDSQLPPLKNFILPSGGESAVFLHQCRSICRRAERITIPLVEAGIADNAVGKYLNRLSDFFFVAARYAAMFEKHTENIYQQR 260
[Close]
BLAST of jgi.p|Trimin1|177293 vs. uniprot
Match: A0A383W2B9_TETOB (Cob_adeno_trans domain-containing protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383W2B9_TETOB)

HSP 1 Score: 207 bits (528), Expect = 5.900e-64
Identity = 104/181 (57.46%), Postives = 136/181 (75.14%), Query Frame = 1 
Query:  187 LYTRTGDKGSSSLFSGERRSKADPTFHAIGVTDELNSVTGVARQYCLMAGNGLELLLEDIQSRLLDVGAAIATPRNQSNDIKLAKTVFPAACTMELECAIDELDSKLPKLKTFILPSGGLAATHLHIARVVCRRAERTVVPLLEAGHVDPEVGRYINRLSDFYFAAARYAALAEGTEERMW 729
            +YT+TGDKG++SL++G+R  K D  FHA+G  DELNS  GVAR+YC      L+  LE+IQSRLLDVG+A+ATP + S+  KLA+  FP++ T E+E  +D LD +LP L+ FILPSGG AA HLH+AR VCRRAER+VVPL+ A  VD EVG+Y+NRLSD+ F AARY A+ +G  E ++
Sbjct:   10 IYTKTGDKGTASLYNGQRLPKDDDMFHALGDVDELNSAVGVAREYCTEEAE-LQQQLEEIQSRLLDVGSAVATPADSSSQSKLARVAFPSSATAEVEGWLDGLDDQLPPLRNFILPSGGKAAAHLHMARSVCRRAERSVVPLVRAELVDLEVGKYLNRLSDYLFTAARYVAMKQGHAEVVY 189
[Close]
BLAST of jgi.p|Trimin1|177293 vs. uniprot
Match: B3SAN8_TRIAD (Cob_adeno_trans domain-containing protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3SAN8_TRIAD)

HSP 1 Score: 206 bits (525), Expect = 6.610e-64
Identity = 101/181 (55.80%), Postives = 133/181 (73.48%), Query Frame = 1 
Query:  187 LYTRTGDKGSSSLFSGERRSKADPTFHAIGVTDELNSVTGVARQYCLMAGNGLELLLEDIQSRLLDVGAAIATPRNQSNDIKLAKTVFPAACTMELECAIDELDSKLPKLKTFILPSGGLAATHLHIARVVCRRAERTVVPLLEAGHVDPEVGRYINRLSDFYFAAARYAALAEGTEERMW 729
            +YT+TGDKG SSLF+GERR K D  F A+G  DEL+S  G+AR++CL AG      LE IQ RL D+G+ IATPR Q+++ KL +T F ++   +LE  IDE+D +LP LK FILPSGGL+++ LH+AR +CRRAER VVPL+    VDP+V +Y+NRLSDF F AARY+A+ EG  E ++
Sbjct:    3 IYTKTGDKGKSSLFTGERRLKDDTIFEALGTNDELSSAIGLAREFCLQAGQNFVDKLEQIQCRLQDIGSNIATPRIQADEDKLVRTEFSSSNVQQLELWIDEMDEQLPPLKNFILPSGGLSSSSLHVARSICRRAERRVVPLVRENAVDPDVAKYLNRLSDFLFTAARYSAMKEGRSEVIY 183
[Close]
BLAST of jgi.p|Trimin1|177293 vs. uniprot
Match: U9UQD1_RHIID (Cobalamin adenosyltransferase-domain-containing protein n=7 Tax=Rhizophagus TaxID=1129544 RepID=U9UQD1_RHIID)

HSP 1 Score: 206 bits (525), Expect = 1.480e-63
Identity = 111/190 (58.42%), Postives = 132/190 (69.47%), Query Frame = 1 
Query:  175 KKSLLYTRTGDKGSSSLFSGERRSKADPTFHAIGVTDELNSVTGVARQYCLMAGNGLELLLEDIQSRLLDVGAAIATPRNQSNDIKLAKTVFPAACTMELECAIDELDSKLPKLKTFILPSGGLAATHLHIARVVCRRAERTVVPLLEAGHVDPEVGRYINRLSDFYFAAARYAALAEGTEERMWIHRTD 744
            KKS +YTRTGDKG SSLF+GERRSK D  F+A+G  DEL+S  GVA  YC  AGNGLE  L +IQ +L++VG+ IATPRN SN  KL+ T F       LE  ID LD++LP LK FILPSGG +A  LH  R VCRRAER  VPL+EA   +  VG+Y+NRLSDF+F AARYAA+ E   E  +  R D
Sbjct:   10 KKSNVYTRTGDKGKSSLFNGERRSKDDDVFNALGTVDELSSSIGVANHYCKKAGNGLEDKLVEIQCKLIEVGSNIATPRNSSNTSKLSFTSFDEENVNILESWIDNLDNQLPPLKNFILPSGGESAVFLHQCRSVCRRAERVTVPLVEAEVTEQSVGKYLNRLSDFFFVAARYAAMFEKHIENYYEQRRD 199
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|177293 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z8K8_9STRA6.970e-176100.00Cobalamin adenosyltransferase-domain-containing pr... [more]
A0A835Z3S8_9STRA6.860e-9871.50Cob(I)alamin adenosyltransferase n=1 Tax=Tribonema... [more]
A0A7S3GR11_9STRA4.730e-7058.42Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A4D9CVG6_9STRA5.420e-6657.53Cob_adeno_trans domain-containing protein n=1 Tax=... [more]
A0A1D1ZD89_9ARAE1.060e-6556.78Cob(I)yrinic acid a,c-diamide adenosyltransferase,... [more]
A0A397G608_9GLOM1.370e-6455.32Cob_adeno_trans domain-containing protein n=1 Tax=... [more]
A0A8H4A6A3_GIGMA3.240e-6453.69CobIalamin adenosyltransferase n=1 Tax=Gigaspora m... [more]
A0A383W2B9_TETOB5.900e-6457.46Cob_adeno_trans domain-containing protein n=2 Tax=... [more]
B3SAN8_TRIAD6.610e-6455.80Cob_adeno_trans domain-containing protein n=2 Tax=... [more]
U9UQD1_RHIID1.480e-6358.42Cobalamin adenosyltransferase-domain-containing pr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_149contigContig_149:161691..165990 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|177293|e_gw1.149.29.1
BRITEko00000,ko00001,ko00002,ko01000
KEGG rclassRC00533
KEGG ReactionR01492,R05220,R07268
KEGG ModuleM00122
KEGG Pathwayko00860,ko01100,map00860,map01100
KEGG koko:K00798
EC2.5.1.17
Descriptioncob(I)yrinic acid a,c-diamide adenosyltransferase activity
COG categoryS
Max annot lvl33208|Metazoa
EggNOG OGsCOG2096@1|root,2QS64@2759|Eukaryota,399ET@33154|Opisthokonta,3BDEZ@33208|Metazoa
Evalue1.08e-64
Seed ortholog10228.TriadP32318
Hectar predicted targeting categorymitochondrion
TranscriptId177615
TrackFilteredModels1
ProteinId177293
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|177293gene_16631Tribonema minus UTEX_B_3156 geneContig_149 161691..165990 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_16631_1exon_16631_1Tribonema minus UTEX_B_3156 exonContig_149 161691..161994 +
exon_16631_2exon_16631_2Tribonema minus UTEX_B_3156 exonContig_149 162853..163052 +
exon_16631_3exon_16631_3Tribonema minus UTEX_B_3156 exonContig_149 164166..164300 +
exon_16631_4exon_16631_4Tribonema minus UTEX_B_3156 exonContig_149 165880..165990 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_16631CDS_16631Tribonema minus UTEX_B_3156 CDSContig_149 161691..161994 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|177293Trimin1|177293|e_gw1.149.29.1Tribonema minus UTEX_B_3156 polypeptideContig_149 161691..165990 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_16631 ID=mRNA_16631|Name=jgi.p|Trimin1|177293|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=750bp|location=Sequence derived from alignment at Contig_149:161691..165990+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTGGCGGAGGACCGTTGCGACGGCCGTGAGCAGGGCGCCCTCAGTGGC
GCACCCTGCGCAGCGGGGCGCAGCGTCATACTGGGTCCGCGCTCTTAGCA
ACACACCAGGCGTGCCGCCGGAGTCCCCGTTCACCTTCAAGGATATCGTG
AGCAGGAGGCGAGAGACGAGATTGAAGAAGTCTCTGCTGTACACGAGGAC
TGGTGATAAGGGATCGAGCTCTCTGTTTAGTGGGGAGAGGAGGAGCAAAG
CGGATCCGACGTTCCATGCCATCGGAGTGACGGACGAGCTGAATAGTGTG
ACAGGCGTTGCGCGTCAGTACTGCCTGATGGCCGGCAACGGCCTGGAGCT
GCTGCTGGAGGACATTCAGAGCCGCCTGCTAGACGTGGGCGCCGCCATCG
CCACGCCGCGCAACCAAAGCAATGACATCAAGCTTGCAAAAACGGTGTTC
CCCGCGGCGTGCACCATGGAGCTTGAGTGCGCCATCGATGAACTCGACTC
AAAGCTGCCGAAGCTCAAGACGTTCATCCTGCCGAGCGGCGGGCTCGCCG
CCACGCACCTGCACATAGCGCGCGTCGTCTGCCGCCGCGCGGAGCGCACC
GTGGTGCCGCTGCTAGAGGCCGGCCACGTTGACCCCGAGGTCGGCCGCTA
CATCAACAGGCTCAGCGACTTCTACTTTGCCGCCGCGCGCTACGCGGCGC
TGGCAGAGGGCACCGAGGAGCGCATGTGGATCCACCGCACCGACTCCTAG
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protein sequence of jgi.p|Trimin1|177293

>Trimin1|177293|e_gw1.149.29.1 ID=Trimin1|177293|e_gw1.149.29.1|Name=jgi.p|Trimin1|177293|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=250bp
MWRRTVATAVSRAPSVAHPAQRGAASYWVRALSNTPGVPPESPFTFKDIV
SRRRETRLKKSLLYTRTGDKGSSSLFSGERRSKADPTFHAIGVTDELNSV
TGVARQYCLMAGNGLELLLEDIQSRLLDVGAAIATPRNQSNDIKLAKTVF
PAACTMELECAIDELDSKLPKLKTFILPSGGLAATHLHIARVVCRRAERT
VVPLLEAGHVDPEVGRYINRLSDFYFAAARYAALAEGTEERMWIHRTDS*
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mRNA from alignment at Contig_149:161691..165990+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_16631 ID=mRNA_16631|Name=jgi.p|Trimin1|177293|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4300bp|location=Sequence derived from alignment at Contig_149:161691..165990+ (Tribonema minus UTEX_B_3156 )
ATGTGGCGGAGGACCGTTGCGACGGCCGTGAGCAGGGCGCCCTCAGTGGC
GCACCCTGCGCAGCGGGGCGCAGCGTCATACTGGGTCCGCGCTCTTAGCA
ACACACCAGGCGTGCCGCCGGAGTCCCCGTTCACCTTCAAGGATATCGTG
AGCAGGAGGCGAGAGACGAGATTGAAGAAGTCTCTGCTGTACACGAGGAC
TGGTGATAAGGGATCGAGCTCTCTGTTTAGTGGGGAGAGGAGGAGCAAAG
CGGATCCGACGTTCCATGCCATCGGAGTGACGGACGAGCTGAATAGTGTG
ACAGGTGCGCGGCTGCTGCTGCCTGCCTGCAGTTTGTGTTGAGTCAAAAG
TTGTCAATACACCGTGTAGCACTGGGTTGACACTTGTGTCATGCAATCGA
ATGCTGTGCAATCAAGTGTCCAATCGGTAAGCCCCAACTTTGCACACCAA
TATCAGATTATGCACCAGCCTTTCTGTGACGGTGGACGGAATCAGAGCAA
AGGCGCAGTCAGGAAAAGTGCAGCTGTACCACGTTCATACCGCACCACTG
CTCTTGTTGGGATGCCTGCCGCCCAATATGCTGCTGCAGTGCGCAGTCAC
ACCCATATTCAGAGCTTGTTCTTAGGGGCACAAGCGGGCATCACACTCAA
GCATTCGGTTCTCGGCCCGCCGTGCACCAGATCGCAAAGCTGCGCCTGCG
CAGGCATGGCGCGGCCATACTGCCTGATAAGGCGATAACAGCCCTGAATT
TTTTGGCACCATCGTGCGCACAACTTCGATAAGTGGAATCAGGCATTGGA
TTCCGCAGTGCGCATGCTGGGAATGACTCGCCGCAAGGCGCAGCAGTGCT
CATCACGGTCACCCGTCACCTGGATGGCGCGCCCATGAGCCGTGCCTCCG
TTTGTGTCAATGCATGGATTACCTCGCGAGCGTGCAGGCGCGGCGCAGCA
GTACTGCCTGAATGGCCGGCAACGGCCTGGAGCTGCCCCTCCTGGAGGAC
ATTCAGAGCGCACACCAACATGAACTGAGTCCCGTAGCGTGCATGATGCT
GACGATGACTCGAGTTTTTTTTACGCCCGAGCAGCACGCCACATTTATGA
ATGGAACGGAGTCACGCATTCATGCGCTGAGAGTCAGATTCACGCCACGC
GCGCGCACGCAGGCGTTGCGCGTCAGTACTGCCTGATGGCCGGCAACGGC
CTGGAGCTGCTGCTGGAGGACATTCAGAGCCGCCTGCTAGACGTGGGCGC
CGCCATCGCCACGCCGCGCAACCAAAGCAATGACATCAAGCTTGCAAAAA
CGGTGTTCCCCGCGGCGTGCACCATGGAGCTTGAGTGCGCCATCGATGAA
CTCGACTCAAAGGTGAATTCAGCTGCAGCGATGTTCACATAAACTTCTAT
ATACTTCAATATGTGCTTCACAGTCGTGTCGCCACGCCGCGCGACCAGAG
CAGCGATGTCAAGCTCGCCAAGACGGCGTTCCCCGCGGCGTGCACCATGG
AGCTCGAGTACGCCATCGATGAACTGGATTCAAAGGTGCAATGATTAATG
TTATAGACCATTTACTTGTGAACAATGGTGTTCACGTATACCTTTGCAAT
CGTGTGCAGCGGCGGTTAATCTGCCACGCCGCGCGATCAGAGCAGCAACG
TCAAGCTCGCAAAAACGGTGTTCCCGGCGGCGTGCACCATGGAGCTCGAG
TGCGCCAGCGATTAACTCGATTCAAAGGTGCATTTATGTTCATTGAAAGG
TACTTCTATGTACTATTGTGTTATGTATGTACATCTATTTTGCACTCGTA
TGCAGCGACCAGCGCAGTGACGCAAAGCTTGCAGAACGGCGTGCCATACG
GTCCTTGCCGTTACGCTGGCACGCGCCGTTCATGAGATTGGTTCAACAGT
GACGCGCCGCTTTGTTCATGTTGTAGGTGTACCTAGCGTAGTGTGTGCAA
CAGCGGCGTCATTGCCGCTGTGTGAAAAGCGTAGCGACGTCACAATCGCA
AGACGGCGTTCGCCCATGGTGTCTGGAGCTCGAGTGCGCGACCAACGAGC
TCAATTCACAGGCGGCGCGCCGCTGCATTGTCGCTGCCCTGTCTTTGCAA
CAGTGTTTATGACTTTCACGCGCGCGTGTGGATACATAGGGAAGCACTGT
GTGCAATAGCGGCTTCAACGCTTGCCACGCACTTACAACAGCGGCAGTGC
CCCGGGACTTGAGGGTGCTGCAAAGTAGCCTCATATGCCAACTCTGCTGC
GGCATCGTTCATGCTTGGCCGTTCGTTCTGCGAAGCGGTGCCATCACAAC
AATGCGGTACCTTGAGCTTGCTATACAAAATATGAAGCCCCCATAAGAAC
GGTACCACTTGAAATGGTGCTTGCAGAACAATATGACCGCACTGCAAGCG
CGAAGGCAGTCTGCTAGCCCGCCTCAACGACTGCTGCGCTGTCCCCTTTG
CCTGCCCCTTGCGCCGCCGCCGCAGCTGCCGAAGCTCAAGACGTTCATCC
TGCCGAGCGGCGGGCTCGCCGCCACGCACCTGCACATAGCGCGCGTCGTC
TGCCGCCGCGCGGAGCGCACCGTGGTGCCGCTGCTAGAGGCCGGCCACGT
TGACCCCGAGGTGCGCTTATAAATACTTGGAAGTACTTGAAAGTATATAC
TTATTTGCAGCAGGCTGCATCTGTAACCTCAACTTGGAGTATCTGCTCGC
TGCCACGCACCTGCACGTTGCGCGCGTCGTCTGCCGCCGCGCCGAGCGCA
CCGTGGTGCCGCTGCTGGAGGCCGGCCACGTCGACCCGGAGGTACACTTC
TTCCCTGCTGTAACTTCCACTTCAACTCCAACTATCATTGCCACCGCGCC
TGCACGTCGCGCGCGTCGTCTGCTGCCGCGTGGAACGCACCGTGGTGCCG
CTGCTGGAGGCCGGCCACGTTGACCCTGAGGTACGCTTCTTCTCTGCTGT
AACTGTATCTTCAACTTGAAGTATCCGCTCATTGCCTGCACGTTGCGCGC
GTCGTCTGCCGCCGCGTGGAGCGCACCGCGGTGCCCCTGCTGGAGGTCGG
CCACGTCGACCCCGATGTACACTTCTTCCCTGCTGTAACTTCAAGTTTGA
CTTGAAGTACCATTGCGGTGTGCCAGAACCACACTCGTCGCCCACCCGCG
GTAGCTCACGGCCCTACCCCAGCCCCTGCATTGACAACATTGTCTTATGG
TACGTGCTCGCAGCCATGCGCCTGCACATTGCGCGTGTCTTGCAACTGCC
GGCACGCGCGAGCGCATTCAGGTATCTGCAGTGGAAACCGCCTGCGTTGT
TCCCAATGTTGCATCTCAGTACCGTAGCCCCCTGGCCCTGCATCAGCACG
GCAACTTCAACTCCACGATGCTTTCCATTCACGTGCACGATGCGCCATTC
GCTGCTGCTGCTGCTGGCGGCCCGCGGTGTTGTCCCTGAGGTGCATAGAA
CGCCGTGCCTCTGGATCACATGATCAGTATCGAAAACTGCACAGCAATCA
ACCTCAACATCAGGGCTTGCAGCCGCATGGCTGCGGGGACCCCCTGAGAC
AGGCATGTATTCGCTGCCTCAGAGACGCTCTCCCCCATGCTGAACTTCTA
TCAATACCCTCCATAAGCACCGGTGGTGAGCGCAAAGATCATCTACTGAA
TGCGCTTGATAGCACAGTGGCTACTGTAGCAGGTGACCGCTGCCATTCTA
GCACTGACCGTTGCATCACCGCTGCCGCCGTCGCCGCCACCACGGCCTTG
TTTGAACAGACAGCAGTGCTCATGAACCCGCTGTGCGCTGAACACGATGC
ATCGCGTTGCACACCCCACAGGCAAAGCCGAAAGCGCTTTAGTCGAGGCG
AAGCGCGCCTCTGGGCATGTATCTGCGTAGCTGCATGTTTGCACAACGCC
GTCGTCTCGCACATGTTTGCTGTTGCCTCTGTACTGTTGTGACCTGTGAG
CACTGCCCCCGCCGCTGCTGCCGTCGCCGCTGCCGCCGCCGCCGCTGCTG
CCGCCACCGCCGCCGCCGCCACCGCCGCTGCCGCTGCCGCCAGGCGGTAA
AATACAATGATCACATAACGCTTGAGCACCACTGTAGTGGGTGGCCGCAA
CCAGCCTGACATGGGATCACTGACCCGTGGGTTGCCGCCGCCGCTGTTGC
CGCCGCCGCCACCGCTGCTGCCGCCGCTGCTGCCGCCAGGTCGGCCGCTA
CATCAACAGGCTCAGCGACTTCTACTTTGCCGCCGCGCGCTACGCGGCGC
TGGCAGAGGGCACCGAGGAGCGCATGTGGATCCACCGCACCGACTCCTAG
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Coding sequence (CDS) from alignment at Contig_149:161691..165990+

>mRNA_16631 ID=mRNA_16631|Name=jgi.p|Trimin1|177293|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=750bp|location=Sequence derived from alignment at Contig_149:161691..165990+ (Tribonema minus UTEX_B_3156 )
ATGTGGCGGAGGACCGTTGCGACGGCCGTGAGCAGGGCGCCCTCAGTGGC
GCACCCTGCGCAGCGGGGCGCAGCGTCATACTGGGTCCGCGCTCTTAGCA
ACACACCAGGCGTGCCGCCGGAGTCCCCGTTCACCTTCAAGGATATCGTG
AGCAGGAGGCGAGAGACGAGATTGAAGAAGTCTCTGCTGTACACGAGGAC
TGGTGATAAGGGATCGAGCTCTCTGTTTAGTGGGGAGAGGAGGAGCAAAG
CGGATCCGACGTTCCATGCCATCGGAGTGACGGACGAGCTGAATAGTGTG
ACAGGCGTTGCGCGTCAGTACTGCCTGATGGCCGGCAACGGCCTGGAGCT
GCTGCTGGAGGACATTCAGAGCCGCCTGCTAGACGTGGGCGCCGCCATCG
CCACGCCGCGCAACCAAAGCAATGACATCAAGCTTGCAAAAACGGTGTTC
CCCGCGGCGTGCACCATGGAGCTTGAGTGCGCCATCGATGAACTCGACTC
AAAGCTGCCGAAGCTCAAGACGTTCATCCTGCCGAGCGGCGGGCTCGCCG
CCACGCACCTGCACATAGCGCGCGTCGTCTGCCGCCGCGCGGAGCGCACC
GTGGTGCCGCTGCTAGAGGCCGGCCACGTTGACCCCGAGGTCGGCCGCTA
CATCAACAGGCTCAGCGACTTCTACTTTGCCGCCGCGCGCTACGCGGCGC
TGGCAGAGGGCACCGAGGAGCGCATGTGGATCCACCGCACCGACTCCTAG
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