mRNA_16590 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|353640 vs. uniprot
Match: A0A836CIV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIV6_9STRA) HSP 1 Score: 1163 bits (3008), Expect = 0.000e+0 Identity = 742/742 (100.00%), Postives = 742/742 (100.00%), Query Frame = 1
Query: 1 MSLVCSTIESSLFNSGSPLRKLDADGVMNVRRLDPELTMGTSTHTAATDTANAENPPVRKHKQVVISGEGRSGSTLVGTLFKAPEWAYYYEPLRFVWPPYAEQARAERAAAAAADPPARCSHSYPVRCTAANAAALLEAVACRRSARPLELLEREVAXXXXXXXXXXHWTVPVRLTATRGAAAFARATGLFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASLVSPVDLPTAEQVEETLSQCRGKVGVAAKIIRMTGRLGELFEVADELGEKFDLVLHLVRDPRAVLASRWTLXXXXXXXXXXXXXXXSAGLRSVGWLTPREHTYRATFAWSKSIVXXXXXXXXXXXXXXXXXXXMCDGMMDDAAAGAGRPEYLLQRYEDLAHGAEARAAAVYARIGAPAPEAVLREARVYDGCEGLRWGELAQCKSDKAAMRADQGGWGCAGGAGAVQERQGRPMRADPRGFMPAYNTAPRNFTAQLDKWKRTLTHEEVRAVEDACGTVFKFMFPHVALVTRGACGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVAALSGSARNRQTSQYIQGQPLLTHRVVQAAPPRLILPLPLAAARRCDGSCAAXXXXRQQRCGGLLPPALPTAGSVHAACEANALRCPGVQVAFTCRPACSIAAAALPPPVPAHVRLPSRAAPHAHAGAPKRIAVRLLMNTVSDGATTDSGIGRSGIAGLYPSALRISGSLAAAF 2226
MSLVCSTIESSLFNSGSPLRKLDADGVMNVRRLDPELTMGTSTHTAATDTANAENPPVRKHKQVVISGEGRSGSTLVGTLFKAPEWAYYYEPLRFVWPPYAEQARAERAAAAAADPPARCSHSYPVRCTAANAAALLEAVACRRSARPLELLEREVAXXXXXXXXXXHWTVPVRLTATRGAAAFARATGLFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASLVSPVDLPTAEQVEETLSQCRGKVGVAAKIIRMTGRLGELFEVADELGEKFDLVLHLVRDPRAVLASRWTLXXXXXXXXXXXXXXXSAGLRSVGWLTPREHTYRATFAWSKSIVXXXXXXXXXXXXXXXXXXXMCDGMMDDAAAGAGRPEYLLQRYEDLAHGAEARAAAVYARIGAPAPEAVLREARVYDGCEGLRWGELAQCKSDKAAMRADQGGWGCAGGAGAVQERQGRPMRADPRGFMPAYNTAPRNFTAQLDKWKRTLTHEEVRAVEDACGTVFKFMFPHVALVTRGACGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVAALSGSARNRQTSQYIQGQPLLTHRVVQAAPPRLILPLPLAAARRCDGSCAAXXXXRQQRCGGLLPPALPTAGSVHAACEANALRCPGVQVAFTCRPACSIAAAALPPPVPAHVRLPSRAAPHAHAGAPKRIAVRLLMNTVSDGATTDSGIGRSGIAGLYPSALRISGSLAAAF
Sbjct: 1 MSLVCSTIESSLFNSGSPLRKLDADGVMNVRRLDPELTMGTSTHTAATDTANAENPPVRKHKQVVISGEGRSGSTLVGTLFKAPEWAYYYEPLRFVWPPYAEQARAERAAAAAADPPARCSHSYPVRCTAANAAALLEAVACRRSARPLELLEREVAXXXXXXXXXXHWTVPVRLTATRGAAAFARATGLFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASLVSPVDLPTAEQVEETLSQCRGKVGVAAKIIRMTGRLGELFEVADELGEKFDLVLHLVRDPRAVLASRWTLXXXXXXXXXXXXXXXSAGLRSVGWLTPREHTYRATFAWSKSIVXXXXXXXXXXXXXXXXXXXMCDGMMDDAAAGAGRPEYLLQRYEDLAHGAEARAAAVYARIGAPAPEAVLREARVYDGCEGLRWGELAQCKSDKAAMRADQGGWGCAGGAGAVQERQGRPMRADPRGFMPAYNTAPRNFTAQLDKWKRTLTHEEVRAVEDACGTVFKFMFPHVALVTRGACGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVAALSGSARNRQTSQYIQGQPLLTHRVVQAAPPRLILPLPLAAARRCDGSCAAXXXXRQQRCGGLLPPALPTAGSVHAACEANALRCPGVQVAFTCRPACSIAAAALPPPVPAHVRLPSRAAPHAHAGAPKRIAVRLLMNTVSDGATTDSGIGRSGIAGLYPSALRISGSLAAAF 742
BLAST of jgi.p|Trimin1|353640 vs. uniprot
Match: A0A835Z1F9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1F9_9STRA) HSP 1 Score: 324 bits (830), Expect = 6.970e-99 Identity = 208/463 (44.92%), Postives = 238/463 (51.40%), Query Frame = 1
Query: 181 HKQVVISGEGRSGSTLVGTLFKAPEWAYYYEPLRFVWPPYAEQARAERAAAAAADPPARCSHSYPVRCTAANAAALLEAVACRRSARPLELLEREVAXXXXXXXXXXHWTVPVRL-TATRGAAAFARATGLFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASLVSPVDLPTAEQVEETLSQCRGKVGVAAKIIRMTGRLGELFEVADELGEKFDLVLHLVRDPRAVLASRWTLXXXXXXXXXXXXXXXSAGLRSVGWLTPREHTYRATFAWSKSIVXXXXXXXXXXXXXXXXXXXMCDGMMDDAAAGAGRPEYLLQRYEDLAHGAEARAAAVYARIGAPAPEAVLREARVYDGCEGLRWGELAQCKSDKAAMRADQGGWGCAGGAGAVQERQGRPMRADPRGFMPAYNTAPRNFTAQLDKWKRTLTHEEVRAVEDACGTVFKFMFPHVALVTR 1566
HKQV+I+GEGRSGSTLVGTLF+APEW+Y+YEPLR+ WP R E P +CS YP CTAANAAALLEAVAC S RPLELL RE A W AT A F RATGL+ SL P D E V+ L C GK GVAAK+IR+TG+L ELF VADELG DLV+HLVRDPRAVLASR+ SV WL P TY T+ W+KS CDGMM DA+AGAGR EYLL RYEDLA +E RA VY RIGAP PEAVLREARVYDGC E AQC D + +Q + F YNT PRNFT Q+ KW+ L+ +EVRAVED C VF++M+PH L ++
Sbjct: 75 HKQVIITGEGRSGSTLVGTLFRAPEWSYHYEPLRYAWPRLEGLKRLEHERYGR-PMPMQCSAHYPHHCTAANAAALLEAVACTHSRRPLELLLREAAFAAEHPPRGAPWLGARNFEAATSNAVDFIRATGLYGPDADSVP-------------------------------SLADPADAEPPEDVQAHLRACVGKAGVAAKVIRITGKLEELFAVADELGVALDLVVHLVRDPRAVLASRY----------------------SVHWLYPVGRTYGPTYRWAKST---------------------CDGMMLDASAGAGRAEYLLLRYEDLAGDSEERAHMVYQRIGAPVPEAVLREARVYDGCVNGSAQERAQCAEDMDNLAKEQ------------------------KHFSQRYNTGPRNFTTQVHKWRDALSDDEVRAVEDGCEEVFRYMYPHATLYSK 438
BLAST of jgi.p|Trimin1|353640 vs. uniprot
Match: A0A835Z755_9STRA (Sulfotransfer_1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z755_9STRA) HSP 1 Score: 271 bits (694), Expect = 3.380e-78 Identity = 240/579 (41.45%), Postives = 279/579 (48.19%), Query Frame = 1
Query: 97 LDPELTMGTSTHTAATDTANAENP-------PVRKHKQVVISGEGRSGSTLVGTLFKAPEWAYYYE-----------------PLRFVWPPYAEQARAERAAAAAADPP-ARCSHSYPVRCTAANAAALLEA------------------------VACRRSA-------RPLELLEREVAXXXXXXXXXXHWTVPVR--LTATRGAAAFARATGLFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASLVSPVDLPTAEQ---------VEETLSQCRGKVGVAAKIIRMTGRLGELFEVADELGEKFDLVLHLVRDPRAVLASRWTLXXXXXXXXXXXXXXXSAGLRSVGWLTPREHTYRATFAWSKSIVXXXXXXXXXXXXXXXXXXXMCDGMMDDAAAGAGRPEYLLQRYEDLAHG-------------------------AEARAAAVYARIGAPAPEAVLREARVYDGCEGLRWGELAQCKSDKAAMRADQGGWGCAGGAGAVQERQGRPMRADPRGFMPAYNTAPRNFTAQLDKWKRTLTHEEVRAVEDACGTVFKFMFPHVAL 1557
+ P +G S H +TA + P P HK+V+IS EGRSGSTLVG+LF + +W YYY+ PLRFVWPP E ARA+ A D A CS PVRCTAA+ AAL EA V C+R+ RP ELL RE+A + R AT AA F RA+GLFD XXXXXXXX + L +P D+PT EQ VEETLSQC GKVGVAAKIIRMTGRLGELF AD +G + DL++HLVRDPRAVLASR+ XXXXXXXXXXXXXXX +GW+ P TY AT AW+ SI C +M DA + A R EYLL RYEDLA AE RA VYARIGAP P VLR ARVYDGC E QC+ DKAAM A RP + Y+TAPRNFT ++ KW+ L+ +EVRA ED C VF M+ L
Sbjct: 1 MPPPRLIGAS-HPETAETAASPPPGFDYNSLPRVTHKRVIISSEGRSGSTLVGSLFDSTDWTYYYDTXXXXXXXXXXXXXXXXPLRFVWPPM-EAARAKEMEAWDGDGTIAHCSAHNPVRCTAASLAALFEARRAXXXXXXXXXXXXXXXXXXXXVVGCQRTVXXXXXXXRPWELLAREIADAARDPIKERRQWIGTRDHTWATGSAAEFLRASGLFDDGNGXXXXXXXXREGDA-------------------APPLFAPGDMPTPEQESPLQCRGEVEETLSQCHGKVGVAAKIIRMTGRLGELFAAADAVGVQLDLLVHLVRDPRAVLASRYGXXXXXXXXXXXXXXXXXXXXXXIGWMHPTSRTYNATRAWASSI---------------------CGDIMHDARSSAQRDEYLLLRYEDLAGDXXXXXXXXXXXXXXXXXXAEGRAGDAEDRARMVYARIGAPVPRDVLRAARVYDGCVAGPDDERRQCRRDKAAMSA-------------------RPNHGN------GYDTAPRNFTERIGKWRDVLSDDEVRATEDGCAEVFATMYADATL 512
BLAST of jgi.p|Trimin1|353640 vs. uniprot
Match: A0A835ZE24_9STRA (Sulfotransfer_1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE24_9STRA) HSP 1 Score: 253 bits (647), Expect = 1.590e-70 Identity = 172/460 (37.39%), Postives = 225/460 (48.91%), Query Frame = 1
Query: 205 EGRSGSTLVGTLFKAPEWAYYYEPLRFVWPPYAEQARAERAAAAAADPPA-RCSHSYPVRCTAANAAALLEAVACRRSARPLELLEREVAXXXXXXXXXX-HWTVPVRLT-ATRGAAAFARATGLFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASLVSPVD-LPTAEQVEETLSQCRGKVGVAAKIIRMTGRLGELFEVADELGEKFDLVLHLVRDPRAVLASRWTLXXXXXXXXXXXXXXXSAGLRSVGWLTPREHTYRATFAWSKSIVXXXXXXXXXXXXXXXXXXXMCDGMMDDAAAGAGRPEYLLQRYEDLAHGAEARAAAVYARIGAPAPEAVLREARVYDGCEGLRWGELAQCKSDKAAMRADQGGWGCAGGAGAVQERQGRPMRADPRGFMPAYNTAPRNFTAQLDKWKRTLTHEEVRAVEDACGTVFKFMFPHVALVTRGA 1572
+GRSGS++VGTLF +P+WAYY+EPL WP Q E A + PP CS P RCTAA A +LE +AC+ S RP+ELL RE+A WT T +T AA F +GLF+ +A +SP + LP+ Q E+ LSQC+ K GVAAKIIRMTGRLGEL+ D LG + DLV+ LVRDPRAVLASR+ S+GW P +Y AT AW+ S C +M D RPEY+L RYEDLA AE A +YA++G PE VLR R+YDGC ++ CK ++A + ++ + Y+TAPRNFTAQL+KW RTL +E+RAVE+ C +F+ ++ L++ GA
Sbjct: 245 QGRSGSSMVGTLFSSPDWAYYFEPLADAWPKLEAQFEMEAEAMKSGAPPVVYCSAHSPNRCTAATIALVLEILACQLSTRPVELLLREIAAAAAAPKPPLGKWTGKRDHTYSTANAADFLLTSGLFEAGPRPLPSLFM-------------------------AAEPLSPFEQLPSRTQAEKRLSQCQSKRGVAAKIIRMTGRLGELYAATDALGAQLDLVIQLVRDPRAVLASRY----------------------SIGWSHPVARSYNATRAWAASA---------------------CGDIMYDHVNSTQRPEYMLLRYEDLAGNAEKHARDIYAKMGISTPEYVLRLTRIYDGCVSGTHTQVLNCKKERARLMGNRS--------------------------VDGYDTAPRNFTAQLEKWTRTLRADEIRAVEEGCADLFRVLYADAQLLSSGA 610
BLAST of jgi.p|Trimin1|353640 vs. uniprot
Match: A0A836CHU1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHU1_9STRA) HSP 1 Score: 173 bits (438), Expect = 9.690e-41 Identity = 167/537 (31.10%), Postives = 213/537 (39.66%), Query Frame = 1
Query: 178 KHKQVVISGEGRSGSTLVGTLFKAPEWAYYYEPL--RFVWPPYAE------QARAERAAAAAADPPARCSHSYPVRCTAANAAALLEAVACRRSARPLELLEREV----------------AXXXXXXXXXXHWTVPVRLTATRGAAAFARATGLFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASLVSPVDLPTAEQVEETLS--------------------------------------------------QCRGKVGVAAKIIRMTGRLGELFEVADELGEKFDLVLHLVRDPRAVLASRWTLXXXXXXXXXXXXXXXSAGLRSVGWLTPREHTYRATFAWSKSIVXXXXXXXXXXXXXXXXXXXMCDGMMDDAAAGAGRPEYLLQRYEDLAHGAEARAAAVYARIGAPAPEAVLREARVYDGCEGLRWGELAQCKSDKAAMRADQGGWGCAGGAGAVQERQGRPMRADPRGFMPAYNTAPRNFTAQLDKWKRTLTHEEVRAVEDACGTVFKFMFPHVALVTR 1566
K K+V+I+GEGRSGS+LVG+LFK EW+Y +EPL RF PP A A R +A RC+ CTAA AA+LE +AC R+ARP LL EV XXXXXXXXXX AT G A + + S V A + L+ C K G+A K+IRM GRLGE+ E+A +G+ DLV+HL+RDPRAVLASR+ SVGW P YR+T W+ ++ C G M DA AGA PEY++ RYED+A GAE +A +Y R+G P V R DGCE E A C ++ R + + Y+TAPR+FTAQ KW+ L EV+AVE C VF+ +P L+TR
Sbjct: 525 KRKRVIITGEGRSGSSLVGSLFKTEEWSYVFEPLKSRFYDPPVVNGTVPGGSAGAPRVSADELAARPRCARPLNYLCTAAKTAAVLEELACVRTARPAALLALEVDAATEDAARAXXXXXXXXXXXXXXXXXXXXXXXXXXATLGMTPDAYRRSMEQTAVTLRKGPGAAALAAIERRRQAQEAQARVARERGPALSSGHRVGHDYASEGAAALALXXXXXXXXXXXXXXXXXXLGVSAEAXXXXXXXXXXXXXXXXXXXGGGGRDCEAKKGIAVKLIRMVGRLGEMLEMARAVGQMPDLVIHLIRDPRAVLASRY----------------------SVGWGYPGNRGYRSTLDWATNL---------------------CGGTMADATAGAAHPEYMVLRYEDMAQGAEWQAEGLYDRLGMEMPAGVREMMRESDGCESGTEEERAHC----------------------LEARANKTVTTK-------YSTAPRDFTAQNAKWRDALARHEVKAVETGCREVFERFYPDAELLTR 989
BLAST of jgi.p|Trimin1|353640 vs. uniprot
Match: A0A835ZCJ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCJ1_9STRA) HSP 1 Score: 161 bits (408), Expect = 9.140e-38 Identity = 186/575 (32.35%), Postives = 226/575 (39.30%), Query Frame = 1
Query: 178 KHKQVVISGEGRSGSTLVGTLFKAPEWAYYYEPLRFVWPPYAEQA----------RAERAAAAAADPPARCSHSYPVRCTAANAAALLEAVACRRSARPLELLEREV---------------------------------------------------------------------------------AXXXXXXXXXXHWTVPVRLT-------ATRGAAAFARATGLFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASLVSPVDLPTAEQVEETLSQCRGKVGVAAKIIRMTGRLGELFEVADELGEKFDLVLHLVRDPRAVLASRWTLXXXXXXXXXXXXXXXSAGLRSVGWLTPREHTYRATFAWSKSIVXXXXXXXXXXXXXXXXXXXMCDGMMDDAAAGAGRPEYLLQRYEDLAHGAEARAAAVYARIGAPAPEAVLREARVYD--------------GCEGLRWGELAQCKSDKAAMRADQGGWGCAGGAGAVQERQGRPMRADPRGFMPAYNTAPRNFTAQLDKWKRTLTHEEVRAVEDACGTVFKFMFPHVALVTR 1566
+HK+V+I+GEGRSGSTLVGTLFK EW+Y YEPL+ +P + A R + + RCS CTAA AA +LE ++C R+ RP LL E+ W P AT GAAA ARA+GL+D XXXXXXXXX XXXXXXXXXX + Q+ C GK GVA KIIRM GRLGEL E+A LG+ DLV+HL+RDPRAVLASR+ SVGW P Y AT W+ MC G + DA G G EY+L RYED+A GAE A A+YAR G P+ EA D + + MR G C AG ER + M + Y+TAPR+F Q KWK TL +VRAVE C VF +P + L +R
Sbjct: 66 QHKRVLITGEGRSGSTLVGTLFKTEEWSYVYEPLKDRFPDPLRRMFNGTVPGGRPSAPRVSVSELLSDPRCSRLTTNLCTAAKAAVVLEELSCERTPRPEALLALEIDGATEAAAAAEAAXXXXXXXXXXXXXXXXXACPEAXXXXXXXXXXXXXXXXXXXVAARALLADQGXXXXXXXXAARSPPLSREARGQPPLAAQWRPPRASGKKVGYEHATAGAAALARASGLYDDATAXXXXXXXXXLSERAVAAGGVSSXXXXXXXXXXXFN---------RGQLRGGGGGCEGKQGVAVKIIRMPGRLGELLEMAAALGQTPDLVIHLIRDPRAVLASRY----------------------SVGWGVPENRGYDATLDWAN---------------------IMCSGTLLDAERGEGHDEYVLLRYEDMARGAELAAEAIYARFGRLKPQQTRIEACSLDVLLRYXXXXXXXXXXXXXXXXXXXXXXPAVREKMRESDG---CK--AGHEAERH-QCMERVSVANVTKYSTAPRDFQEQNQKWKYTLPRRQVRAVETGCRGVFDRFYPRMPLRSR 582
BLAST of jgi.p|Trimin1|353640 vs. uniprot
Match: A0A836CGD5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGD5_9STRA) HSP 1 Score: 117 bits (293), Expect = 2.570e-24 Identity = 114/395 (28.86%), Postives = 151/395 (38.23%), Query Frame = 1
Query: 169 PVRKHKQVVISGEGRSGSTLVGTLFKAPEWAYYYEPLRFV-WPPYAEQARAERAAAAAADPPARCSHSYPVRCTAANAAALLEAVACRRSARPLELLEREVAXXXXXXXXXX-HWTVPVRLTATRGAAAFARATGLFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASLVSPVDLPTAEQVEETLSQCRGKVGVAAKIIRMTGRLGELFEVADELGEKFDLVLHLVRDPRAVLASRWTLXXXXXXXXXXXXXXXSAGLRSVGWLTPREHTYRATFAWSKSIVXXXXXXXXXXXXXXXXXXXMCDGMMDDAAAGAGRPEYLLQRYEDLAHGAEARAAAVYARIGAPAPEAVLREARVYDGCEGLRWGELAQCKSDKAAMRADQGGWG 1347
P K V+I+G GRSGSTL G++F+AP W + YEPL+ WP + P + H +RC A+ LL+ CR + PL+ + EV + T P+R TR A R DL GVA K IR+ G + +LF ++++LG + DLV+HL+RDPRAVLASR+ SVGW P +Y AT AW++ MC M D+ AG GR Y+ RYEDLA A AR A+Y R+ P VL R D AQ + +A A GG G
Sbjct: 71 PDANRKTVIITGHGRSGSTLTGSIFRAPNWVFNYEPLKLHDWPAGLSKRFDPETNTQCRPDPLQVYHK--MRCPVADMMYLLDLAHCRTTDMPLQAVTLEVDDVPGDDVIRRLNATAPLR--GTRDPACARR--------------------------------------------------DL----------------AGVAVKTIRINGHMDQLFALSEKLGLRVDLVIHLMRDPRAVLASRY----------------------SVGWGMPENRSYDATLAWARD---------------------MCGRTMADSRAGGGRVNYMALRYEDLAAAAVARTQAIYERLERDVPPTVLERMRKND----------AQSQGGDSAKGAGGGGKG 342
BLAST of jgi.p|Trimin1|353640 vs. uniprot
Match: A0A835Z113_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z113_9STRA) HSP 1 Score: 106 bits (265), Expect = 2.390e-23 Identity = 77/107 (71.96%), Postives = 78/107 (72.90%), Query Frame = 1
Query: 274 PLRFVWPPYAEQARAERAAAAAADPPARCSHSYPVRCTAANAAALLEAVACRRSARPLELLEREVAXXXXXXXXXXHWTVPVRLT------ATRGAAAFARATGLFD 576
PLRFVWPPYAEQA AERAA AA DPP RCS AAALLEAVACRRSARPL+LLE E AXXXXXXXXX HWT VRLT ATRGA AFA A GLFD
Sbjct: 16 PLRFVWPPYAEQAHAERAAGAA-DPPTRCS----------TAAALLEAVACRRSARPLKLLEPEAAXXXXXXXXXAHWTALVRLTXXXXXXATRGATAFACAAGLFD 111
BLAST of jgi.p|Trimin1|353640 vs. uniprot
Match: A0A835YTG9_9STRA (Sulfotransfer_1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTG9_9STRA) HSP 1 Score: 103 bits (258), Expect = 2.900e-19 Identity = 76/176 (43.18%), Postives = 84/176 (47.73%), Query Frame = 1
Query: 790 MTGRLGELFEVADELGEKFDLVLHLVRDPRAVLASRWTLXXXXXXXXXXXXXXXSAGLRSVGWLTPREHT----------YRATFAWSKSIVXXXXXXXXXXXXXXXXXXXMCDGMMDDAAAGAGRPEYLLQRYEDLAH-----------------GAEARAAAVYARIGAPAPEA 1236
MTGRLGELF+VAD L K DLV+HLVRDPRAVLASR+ SVGWL P HT Y TF W++S+ C GMMDDA A A RPEY+L RYEDL GAEARA VY RIG+P EA
Sbjct: 1 MTGRLGELFDVADALRVKMDLVIHLVRDPRAVLASRY----------------------SVGWLHPVMHTXXXXXXXXXXYEDTFKWAQSL---------------------CTGMMDDALAVASRPEYMLLRYEDLXXXXXXXXXXXXXXXXXXGGAEARARIVYQRIGSPLLEA 133
BLAST of jgi.p|Trimin1|353640 vs. uniprot
Match: A0A835Z7T0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T0_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 5.620e-14 Identity = 61/158 (38.61%), Postives = 71/158 (44.94%), Query Frame = 1
Query: 766 GVAAKIIRMTGRLGELFEVADELGEKFDLVLHLVRDPRAVLASRWTLXXXXXXXXXXXXXXXSAGLRSVGWLTPREHTYRATFAWSKSIVXXXXXXXXXXXXXXXXXXXMCDGMMDDAAAGAGRPEYLLQRYEDLAHGAEARAAAVYARIGAPAPEAV 1239
GVA K IRM GRL E + A+ +G DL +HL+RDPRAVLASR V W P TY ATFAW+ MC M D AA GRP Y L +YE LA +EA A +VYA + A P V
Sbjct: 158 GVAVKTIRMNGRLAEFMDAAERVGSGVDLWIHLLRDPRAVLASRL----------------------GVTWGRPDNRTYEATFAWADD---------------------MCSATMTDLAATEGRPNYKLVQYEHLALHSEATAESVYALLDARLPPEV 272 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353640 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_16590 ID=mRNA_16590|Name=jgi.p|Trimin1|353640|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2497bp|location=Sequence derived from alignment at Contig_175:57204..62899- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTCGCTGGTCTGCAGCACCATTGAGAGTTCTTTGTTCAACTCCGGCTCback to top protein sequence of jgi.p|Trimin1|353640 >Trimin1|353640|estExt_Genemark1.C_Ctg_1750007 ID=Trimin1|353640|estExt_Genemark1.C_Ctg_1750007|Name=jgi.p|Trimin1|353640|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=743bp MSLVCSTIESSLFNSGSPLRKLDADGVMNVRRLDPELTMGTSTHTAATDTback to top mRNA from alignment at Contig_175:57204..62899- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_16590 ID=mRNA_16590|Name=jgi.p|Trimin1|353640|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5696bp|location=Sequence derived from alignment at Contig_175:57204..62899- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_175:57204..62899- >mRNA_16590 ID=mRNA_16590|Name=jgi.p|Trimin1|353640|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2229bp|location=Sequence derived from alignment at Contig_175:57204..62899- (Tribonema minus UTEX_B_3156 )back to top |