mRNA_1656 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|157744
Unique Name	mRNA_1656
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|157744 vs. uniprot
Match: A0A836CDP1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDP1_9STRA)

HSP 1 Score: 903 bits (2333), Expect = 0.000e+0
Identity = 598/598 (100.00%), Postives = 598/598 (100.00%), Query Frame = 1

Query:    1 MWQDRGCRTLLETYAFRTARLEGAAEEQELCDFLERFLRARSVKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPLIDAAAVERSRHAHLLQHALVRALLRAGPQRDLERALALFAAFRARQQRAAAAQVATDRAALPIADYEAAIVDAVGRNRVTIVAGETGCGKSTQVPQFLLQAGHRRVACTQPRRLSAVSLCRRVSQETQDRYGAGVGYKIRFDASATAATRIVFLTEGVLLRELSGDPDLSAYDIVICDEVHERHLTCDFMLGLLRAALARSADLKLVLMSATIDAQLFSDYFGGAPTVRVPGRTYQVDVEYFGGALARHVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPFDARPFARLLAHIDATVAAEERGDLLVFLSGMSDMLAVRDAARAGXXXXXXXXXXXXXXXXARWIVLLLHGSLEAEEQDRAFARAPPGARKCILATNVAESAVTIEGVRFVADSGRAKEMTWDARGGGVRRLREGWISRASAEQRRGRAGRTGPGICYRMYPEAVLDALAPHAAPEVTRVPLEGVLLQVRGRYRACRVXXXXXXXXXXXXXXXXXXXXXXXXXXGEGYKV 1794
            MWQDRGCRTLLETYAFRTARLEGAAEEQELCDFLERFLRARSVKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPLIDAAAVERSRHAHLLQHALVRALLRAGPQRDLERALALFAAFRARQQRAAAAQVATDRAALPIADYEAAIVDAVGRNRVTIVAGETGCGKSTQVPQFLLQAGHRRVACTQPRRLSAVSLCRRVSQETQDRYGAGVGYKIRFDASATAATRIVFLTEGVLLRELSGDPDLSAYDIVICDEVHERHLTCDFMLGLLRAALARSADLKLVLMSATIDAQLFSDYFGGAPTVRVPGRTYQVDVEYFGGALARHVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPFDARPFARLLAHIDATVAAEERGDLLVFLSGMSDMLAVRDAARAGXXXXXXXXXXXXXXXXARWIVLLLHGSLEAEEQDRAFARAPPGARKCILATNVAESAVTIEGVRFVADSGRAKEMTWDARGGGVRRLREGWISRASAEQRRGRAGRTGPGICYRMYPEAVLDALAPHAAPEVTRVPLEGVLLQVRGRYRACRVXXXXXXXXXXXXXXXXXXXXXXXXXXGEGYKV
Sbjct:    1 MWQDRGCRTLLETYAFRTARLEGAAEEQELCDFLERFLRARSVKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPLIDAAAVERSRHAHLLQHALVRALLRAGPQRDLERALALFAAFRARQQRAAAAQVATDRAALPIADYEAAIVDAVGRNRVTIVAGETGCGKSTQVPQFLLQAGHRRVACTQPRRLSAVSLCRRVSQETQDRYGAGVGYKIRFDASATAATRIVFLTEGVLLRELSGDPDLSAYDIVICDEVHERHLTCDFMLGLLRAALARSADLKLVLMSATIDAQLFSDYFGGAPTVRVPGRTYQVDVEYFGGALARHVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPFDARPFARLLAHIDATVAAEERGDLLVFLSGMSDMLAVRDAARAGXXXXXXXXXXXXXXXXARWIVLLLHGSLEAEEQDRAFARAPPGARKCILATNVAESAVTIEGVRFVADSGRAKEMTWDARGGGVRRLREGWISRASAEQRRGRAGRTGPGICYRMYPEAVLDALAPHAAPEVTRVPLEGVLLQVRGRYRACRVXXXXXXXXXXXXXXXXXXXXXXXXXXGEGYKV 598

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BLAST of jgi.p|Trimin1|157744 vs. uniprot
Match: D8LEZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEZ4_ECTSI)

HSP 1 Score: 436 bits (1120), Expect = 1.610e-133
Identity = 245/481 (50.94%), Postives = 313/481 (65.07%), Query Frame = 1

Query:  256 AAVERSRHAHLLQHALVRALLRAGPQRDLERA-LALFAAFRARQQRAAAAQVATDRAALPIADYEAAIVDAVGRNRVTIVAGETGCGKSTQVPQFLLQAGHRRVACTQPRRLSAVSLCRRVSQETQDRYGAGVGYKIRFDASATAATRIVFLTEGVLLRELSGDPDLSAYDIVICDEVHERHLTCDFMLGLLRAALARSADLKLVLMSATIDAQLFSDYFGGAPTVRVPGRTYQVDVEYFGGALARHVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPFDARPFARLLAHIDATVAAEERGDLLVFLSGMSDMLAVRDAARAGXXXXXXXXXXXXXXXXARWIVLLLHGSLEAEEQDRA-------FARAPPGARKCILATNVAESAVTIEGVRFVADSGRAKEMTWDARGGGVRRLREGWISRASAEQRRGRAGRTGPGICYRMYPEAVLDALAPHAAPEVTRVPLEGVLLQVR 1674
            AA+       +L+   V+A+L  GP  D   + L  F  FR R+  A   ++  DRA+LPIA ++ AIV AV  N   +VAG+TGCGKSTQVPQ+LLQAG+ RVACTQPRR+SA+ LCRRVS ET   +G+ V Y++RFD+S   ++RI+FLTEG+LLR+++ DP+LS+Y +VI DEVHERH  CDF+LGLLRA L R  DLK+VLMSATI+ +LFS +F GAP +RVPGR + V+V Y   A    +                                 R  FDARP+ +LL  ID T   +ERGDLLVFLSGMSDMLAV +  R                   RW+VL+LH SL  EEQD+A       F  +P G RK ILATN+AE++VTI+GVRFV DSG+AKEM+WD    GVR L+E W+SRASAEQR+GRAGRTGPG+C+R+Y  +  D L P A PE+ R PLEG++LQ++
Sbjct:  311 AALRELARRGVLEREEVKAMLMPGPMADFRGSVLQAFIDFRMRRSLAKVVKIRRDRASLPIAAFQNAIVRAVASNPCVLVAGDTGCGKSTQVPQYLLQAGYGRVACTQPRRISAMGLCRRVSYETLHEHGSEVAYQVRFDSSRRRSSRILFLTEGLLLRQIASDPNLSSYSVVIVDEVHERHAGCDFLLGLLRAVLRRRPDLKVVLMSATINPELFSRFFDGAPLIRVPGRMHPVEVRYVPTAADNDIQEVVSKHDGEGQRKLRSRGGGGGEGK-------RVMFDARPYVKLLESIDTTTPRDERGDLLVFLSGMSDMLAVTEGVRE----------YVEAKSPRRWVVLMLHSSLSVEEQDKARDFLGLVFDASPLGTRKMILATNIAETSVTIDGVRFVCDSGKAKEMSWDP-ASGVRSLQEFWVSRASAEQRKGRAGRTGPGVCFRLYARSTFDRLPPFAEPEIRRCPLEGLVLQMK 773

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BLAST of jgi.p|Trimin1|157744 vs. uniprot
Match: UPI00115610A9 (probable ATP-dependent RNA helicase DHX34 n=1 Tax=Terrapene carolina triunguis TaxID=2587831 RepID=UPI00115610A9)

HSP 1 Score: 384 bits (986), Expect = 2.750e-123
Identity = 220/457 (48.14%), Postives = 295/457 (64.55%), Query Frame = 1

Query:  319 RAGPQRDLER------ALALFAAFRARQQRAAAAQVATDRAALPIADYEAAIVDAVGRNRVTIVAGETGCGKSTQVPQFLLQAGHRRVACTQPRRLSAVSLCRRVSQETQDRYGAGVGYKIRFDASATAATRIVFLTEGVLLRELSGDPDLSAYDIVICDEVHERHLTCDFMLGLLRAALARSADLKLVLMSATIDAQLFSDYFGGAPTVRVPGRTYQVDVEYFGGALARHVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPFDARPFARLLAHIDATVAAEERGDLLVFLSGMSDMLAVRDAARAGXXXXXXXXXXXXXXXXARWIVLLLHGSLEAEEQDRAFARAPPGARKCILATNVAESAVTIEGVRFVADSGRAKEMTWDARGGGVRRLREGWISRASAEQRRGRAGRTGPGICYRMYPEAVLDALAPHAAPEVTRVPLEGVLLQV 1671
            R GP    ER      AL  +  F  +Q  A  A++  +RAALPIA Y   ++ AV +N+V +VAG+TGCGKSTQVPQ+LL AG+  VACTQPRR++ +SL +RV  E+  +YGA VGY+IRF+++ + AT+IVFLTEG+LLR++  +P L  Y ++I DEVHERHL  DF+LG+LR  L    DLKLVLMSATI+ +LF+ YFGGAP V+VPGR + + V Y    + +  A                                    D RP+ R+L  ID     EERGDLLVFLSG++++ AV +AA+A                  RW+VL LH +L   EQD+  A  PPG RKCI++TN+AE++VTI+GVRFV DSG+ KE+++D +   ++RL+E WISRASAEQR+GRAGRTGPG+CYR+Y E+  DA AP+  PE+ RV L+ ++LQV
Sbjct:  130 RRGPGVPAERLSQFRAALLHYLDFAQKQSFAKLAKLQRERAALPIAQYRDRLLRAVAQNQVVVVAGDTGCGKSTQVPQYLLAAGYSHVACTQPRRIACISLAKRVGFESLHQYGAEVGYQIRFESTRSPATKIVFLTEGLLLRQVQREPALPGYQVLIADEVHERHLHSDFLLGVLRRLLPARPDLKLVLMSATINIRLFAGYFGGAPVVQVPGRLFPITVVY--QPIPQEEAAASGKPER---------------------------LDPRPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVLEAAQA------------YATHTQRWVVLPLHSTLSIAEQDKVLACPPPGVRKCIVSTNIAETSVTIDGVRFVLDSGKVKELSYDPQAK-LQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIQRVALDALVLQV 544

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BLAST of jgi.p|Trimin1|157744 vs. uniprot
Match: A0A6P9DF68_PANGU (probable ATP-dependent RNA helicase DHX34 isoform X4 n=3 Tax=Colubridae TaxID=8578 RepID=A0A6P9DF68_PANGU)

HSP 1 Score: 387 bits (995), Expect = 2.200e-121
Identity = 215/442 (48.64%), Postives = 294/442 (66.52%), Query Frame = 1

Query:  349 ALALFAAFRARQQRAAAAQVATDRAALPIADYEAAIVDAVGRNRVTIVAGETGCGKSTQVPQFLLQAGHRRVACTQPRRLSAVSLCRRVSQETQDRYGAGVGYKIRFDASATAATRIVFLTEGVLLRELSGDPDLSAYDIVICDEVHERHLTCDFMLGLLRAALARSADLKLVLMSATIDAQLFSDYFGGAPTVRVPGRTYQVDVEYFGGALARHVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPFDARPFARLLAHIDATVAAEERGDLLVFLSGMSDMLAVRDAARAGXXXXXXXXXXXXXXXXARWIVLLLHGSLEAEEQDRAFARAPPGARKCILATNVAESAVTIEGVRFVADSGRAKEMTWDARGGGVRRLREGWISRASAEQRRGRAGRTGPGICYRMYPEAVLDALAPHAAPEVTRVPLEGVLLQVR 1674
            AL  F  F  R+  A  A++  +RAALPIA    +++ A+ R+ V +VAG+TGCGKSTQVPQFLL AG+  VACTQPRRL+ V+L +RV++E+  R+G  VGY+IRF+++ + ATRIVFLTEG+LLR+   +P L AY ++I DEVHERHL CDF+LG+LR  L+  ADLKLVLMSATI+ QLF+DYFG AP ++VPGR + + V Y        + P                               R     +PF R+L  ID    +EERGDLL+FLSG++++ AV +AA++                  RW+VL LH +L   EQD+ F  APPG RKCI++TN+AE++VTI+GVRFV D+G+ KE+++D++   + RL+E WISRASAEQR+GRAGRTGPG+CYR+Y E+  D  AP+  PE+ RV L+ ++LQ++
Sbjct:   86 ALLRFLDFAQRRSLARLARLQRERAALPIARSRESLLAALARSPVVLVAGDTGCGKSTQVPQFLLAAGYAHVACTQPRRLACVALAQRVARESLGRFGDQVGYQIRFESARSPATRIVFLTEGLLLRQAQREPTLPAYRVLIVDEVHERHLHCDFLLGVLRRLLSSRADLKLVLMSATINIQLFADYFGDAPVIQVPGRLFPITVIY------EPIRPEESSRGS------------------------RERLGVQPFLRVLQAIDHKYPSEERGDLLIFLSGVAEIGAVVEAAQS------------YAAFTKRWVVLPLHSTLSVAEQDKVFDLAPPGVRKCIISTNIAETSVTIDGVRFVVDAGKVKELSYDSKAK-LHRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDNFAPYPLPEIQRVALDALILQMK 484

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BLAST of jgi.p|Trimin1|157744 vs. uniprot
Match: A0A8J4K430_EUDMI (Putative ATP-dependent RNA helicase DHX34 (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A8J4K430_EUDMI)

HSP 1 Score: 383 bits (983), Expect = 3.720e-121
Identity = 215/446 (48.21%), Postives = 290/446 (65.02%), Query Frame = 1

Query:  337 DLERALALFAAFRARQQRAAAAQVATDRAALPIADYEAAIVDAVGRNRVTIVAGETGCGKSTQVPQFLLQAGHRRVACTQPRRLSAVSLCRRVSQETQDRYGAGVGYKIRFDASATAATRIVFLTEGVLLRELSGDPDLSAYDIVICDEVHERHLTCDFMLGLLRAALARSADLKLVLMSATIDAQLFSDYFGGAPTVRVPGRTYQVDVEYFGGALARHVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPFDARPFARLLAHIDATVAAEERGDLLVFLSGMSDMLAVRDAARAGXXXXXXXXXXXXXXXXARWIVLLLHGSLEAEEQDRAFARAPPGARKCILATNVAESAVTIEGVRFVADSGRAKEMTWDARGGGVRRLREGWISRASAEQRRGRAGRTGPGICYRMYPEAVLDALAPHAAPEVTRVPLEGVLLQVR 1674
            +   AL  +  F  +Q  A  A++  +RAALPI+ Y   ++ AV +N+V ++AG+TGCGKSTQVPQFLL AG+  VACTQPRR++ +SL +RV  E+  +YG  VGY+IRF+++ + AT+IVFLTEG+LLR++  +P L  Y I+I DEVHERHL  DF+LG+LR  L    DLKLVLMSATI+  LFS YFGGAP ++VPGR + + V Y    + +  A                                    D  P+ R+L  ID     EERGDLLVFLSG++++ AV +AA+A                  RWIVL LH +L   EQD+ F   PPG RKCIL+TN+AE++VTI+GVRFV DSG+ KEM++D +G  ++RL+E WISRASAEQR+GRAGRTGPG+CYR+Y E+  DA +P+  PE+ RV L+ ++LQ++
Sbjct:  130 EFRTALLHYLDFTQKQSFAKLAKLQRERAALPISQYRDRLLRAVAQNQVVVIAGDTGCGKSTQVPQFLLAAGYSHVACTQPRRIACISLAKRVGFESLHQYGNQVGYQIRFESTRSPATKIVFLTEGLLLRQVQREPTLPGYHILIADEVHERHLHSDFLLGVLRRLLPARPDLKLVLMSATINISLFSGYFGGAPVLQVPGRIFPISVIY--QPIPKEEASAVGKLGKSER------------------------LDPLPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVLEAAQA------------YAARTQRWIVLPLHSTLSVAEQDKVFDVPPPGVRKCILSTNIAETSVTIDGVRFVLDSGKVKEMSYDPQGK-LQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFSPYPVPEIQRVALDALVLQLK 536

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BLAST of jgi.p|Trimin1|157744 vs. uniprot
Match: A0A7K7BJT6_9AVES (DHX34 helicase (Fragment) n=1 Tax=Nothoprocta ornata TaxID=83376 RepID=A0A7K7BJT6_9AVES)

HSP 1 Score: 383 bits (984), Expect = 7.790e-121
Identity = 219/452 (48.45%), Postives = 296/452 (65.49%), Query Frame = 1

Query:  328 PQRDL---ERALALFAAFRARQQRAAAAQVATDRAALPIADYEAAIVDAVGRNRVTIVAGETGCGKSTQVPQFLLQAGHRRVACTQPRRLSAVSLCRRVSQETQDRYGAGVGYKIRFDASATAATRIVFLTEGVLLRELSGDPDLSAYDIVICDEVHERHLTCDFMLGLLRAALARSADLKLVLMSATIDAQLFSDYFGGAPTVRVPGRTYQVDVEYFGGALARHVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPFDARPFARLLAHIDATVAAEERGDLLVFLSGMSDMLAVRDAARAGXXXXXXXXXXXXXXXXARWIVLLLHGSLEAEEQDRAFARAPPGARKCILATNVAESAVTIEGVRFVADSGRAKEMTWDARGGGVRRLREGWISRASAEQRRGRAGRTGPGICYRMYPEAVLDALAPHAAPEVTRVPLEGVLLQVR 1674
            P+R L    RAL  +  F  ++  A  A++  +RAALPIA Y A ++ AV RN+V +VAG+TGCGKSTQVPQFLL AG+  VA TQPRR++ V+L +RV+ E+  ++G  VGY+IRF++S +AAT+I+FLTEG+LLR++  +P L  Y +++ DEVHERHL  DF+LG+LR  L    DLKL+LMSATI+  LFS YFGGAP ++VPGR++ + V Y         AP                                   D RPF R+L  ID     EERGDLLVFLSG++++ AV +AA+                   RW+VL LH +L   EQD+ F   PPG RKCIL+TN+AE++VTI+GVRFV DSG+ KEM++D +G  ++RL+E WISRASAEQR+GRAGRTGPG+CYR+Y E+  DA +P+  PE+ RV L+ ++LQ++
Sbjct:    2 PRRQLAEFRRALLHYLDFAQKRSFARLAKLQRERAALPIAQYRAPLLRAVARNQVVLVAGDTGCGKSTQVPQFLLAAGYGHVAVTQPRRIACVALAKRVAFESLQQHGEQVGYQIRFESSRSAATKILFLTEGLLLRQVQREPTLPGYRVLVADEVHERHLHGDFLLGVLRRLLPARPDLKLILMSATINIGLFSSYFGGAPVLQVPGRSFPITVIYQ-PIPKEEAAPGGKTER----------------------------LDPRPFLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVLEAAQP------------YAARTQRWVVLPLHSTLSVAEQDKVFDVPPPGVRKCILSTNIAETSVTIDGVRFVLDSGKVKEMSYDPQGK-LQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFSPYPVPEIQRVALDVLVLQLK 411

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BLAST of jgi.p|Trimin1|157744 vs. uniprot
Match: UPI0015D5EB47 (probable ATP-dependent RNA helicase DHX34 n=1 Tax=Cygnus atratus TaxID=8868 RepID=UPI0015D5EB47)

HSP 1 Score: 393 bits (1009), Expect = 8.510e-121
Identity = 221/442 (50.00%), Postives = 290/442 (65.61%), Query Frame = 1

Query:  349 ALALFAAFRARQQRAAAAQVATDRAALPIADYEAAIVDAVGRNRVTIVAGETGCGKSTQVPQFLLQAGHRRVACTQPRRLSAVSLCRRVSQETQDRYGAGVGYKIRFDASATAATRIVFLTEGVLLRELSGDPDLSAYDIVICDEVHERHLTCDFMLGLLRAALARSADLKLVLMSATIDAQLFSDYFGGAPTVRVPGRTYQVDVEYFGGALARHVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPFDARPFARLLAHIDATVAAEERGDLLVFLSGMSDMLAVRDAARAGXXXXXXXXXXXXXXXXARWIVLLLHGSLEAEEQDRAFARAPPGARKCILATNVAESAVTIEGVRFVADSGRAKEMTWDARGGGVRRLREGWISRASAEQRRGRAGRTGPGICYRMYPEAVLDALAPHAAPEVTRVPLEGVLLQVR 1674
            AL L+  F  ++  A  A++  +R ALPIA     ++ AV  N+V +VAG+TGCGKSTQVPQFLL AG+RRVACTQPRR++ VSL +RV+ E+  +YG  VGY+IRF++S + AT IVFLTEG+LLR+   +P L AY+++I DEVHERHL  DF+LG+LR  L    DLKLVLMSATI+ +LFSDYFGGAP ++VPGR + + V Y                                              D RP+ R+L  ID     EERGDLLVFLSG++++ AV++AA+                   RWIVL LH +L   EQD+ F   PPG RKCILATN+AE++VTI+GVRFV DSG+ KEM++D +G  ++RL+E WISRASAEQR+GRAGRTGPG+CYR+Y E+  DA +P+  PE+ RV L+ ++LQV+
Sbjct:  118 ALLLYLDFGQKRSFAKLAKLQREREALPIARARRRLLRAVAENQVVVVAGDTGCGKSTQVPQFLLAAGYRRVACTQPRRIACVSLAKRVAFESLQQYGDQVGYQIRFESSRSPATSIVFLTEGLLLRQAQREPALPAYEVIIADEVHERHLHGDFLLGVLRRLLPARPDLKLVLMSATINIRLFSDYFGGAPVLQVPGRIFPISVIY----------------------------EPIPKEEVAAAAGKPERLDPRPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVQEAAQV------------YAAHTQRWIVLPLHSTLSVSEQDKVFDVPPPGVRKCILATNIAETSVTIDGVRFVLDSGKVKEMSYDPQGK-LQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFSPYPVPEIQRVALDALVLQVK 518

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BLAST of jgi.p|Trimin1|157744 vs. uniprot
Match: UPI001C67EC2F (probable ATP-dependent RNA helicase DHX34 n=1 Tax=Tyto alba TaxID=56313 RepID=UPI001C67EC2F)

HSP 1 Score: 393 bits (1009), Expect = 1.170e-120
Identity = 217/449 (48.33%), Postives = 295/449 (65.70%), Query Frame = 1

Query:  328 PQRDLERALALFAAFRARQQRAAAAQVATDRAALPIADYEAAIVDAVGRNRVTIVAGETGCGKSTQVPQFLLQAGHRRVACTQPRRLSAVSLCRRVSQETQDRYGAGVGYKIRFDASATAATRIVFLTEGVLLRELSGDPDLSAYDIVICDEVHERHLTCDFMLGLLRAALARSADLKLVLMSATIDAQLFSDYFGGAPTVRVPGRTYQVDVEYFGGALARHVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPFDARPFARLLAHIDATVAAEERGDLLVFLSGMSDMLAVRDAARAGXXXXXXXXXXXXXXXXARWIVLLLHGSLEAEEQDRAFARAPPGARKCILATNVAESAVTIEGVRFVADSGRAKEMTWDARGGGVRRLREGWISRASAEQRRGRAGRTGPGICYRMYPEAVLDALAPHAAPEVTRVPLEGVLLQVR 1674
            P  +   AL  +  F  +Q  A  A++  +RAALPI+ Y   ++ AV +N+V ++AG+TGCGKSTQVPQFLL AG+  VACTQPRR++ VSL +RV  E+  +YG+ VGY+IRF+++ + AT+IVFLTEG+LLR++  +P L  Y ++I DEVHERHL CDF+LG+LR  L    DLKLVLMSATI+ +LFS YFGGAP ++VPGR + + V Y    + +  AP                                   D  P+ R+L  ID     EERGDLLVFLSG++++ AV +AA+A                  RW+VL LH +L   EQD+ F   PPG RKCIL+TN+AE++VTI+GVRFV DSG+ KEM++D +G  ++RL+E WISRASAEQR+GRAGRTGPG+CYR+Y E+  DA +P+  PE+ RV L+ ++LQ++
Sbjct:  120 PLAEFRAALLHYLDFTQKQSFAKLAKLQRERAALPISQYRDRLLRAVAQNQVVVIAGDTGCGKSTQVPQFLLAAGYSHVACTQPRRIACVSLAKRVGYESLHQYGSQVGYQIRFESTRSPATKIVFLTEGLLLRQVQREPTLPGYHVLIADEVHERHLHCDFLLGVLRRLLPARPDLKLVLMSATINIRLFSGYFGGAPVLQVPGRIFPISVIY--QPIPKEEAPVGGKWGKSER------------------------LDPLPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVLEAAQA------------YAARTQRWVVLPLHSTLSVAEQDKVFDVPPPGVRKCILSTNIAETSVTIDGVRFVLDSGKVKEMSYDPQGK-LQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFSPYPVPEIQRVALDSLVLQLK 529

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BLAST of jgi.p|Trimin1|157744 vs. uniprot
Match: A0A8D0L8D0_SPHPU (DExH-box helicase 34 n=5 Tax=Sphenodon punctatus TaxID=8508 RepID=A0A8D0L8D0_SPHPU)

HSP 1 Score: 387 bits (994), Expect = 1.990e-120
Identity = 216/447 (48.32%), Postives = 292/447 (65.32%), Query Frame = 1

Query:  334 RDLERALALFAAFRARQQRAAAAQVATDRAALPIADYEAAIVDAVGRNRVTIVAGETGCGKSTQVPQFLLQAGHRRVACTQPRRLSAVSLCRRVSQETQDRYGAGVGYKIRFDASATAATRIVFLTEGVLLRELSGDPDLSAYDIVICDEVHERHLTCDFMLGLLRAALARSADLKLVLMSATIDAQLFSDYFGGAPTVRVPGRTYQVDVEYFGGALARHVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPFDARPFARLLAHIDATVAAEERGDLLVFLSGMSDMLAVRDAARAGXXXXXXXXXXXXXXXXARWIVLLLHGSLEAEEQDRAFARAPPGARKCILATNVAESAVTIEGVRFVADSGRAKEMTWDARGGGVRRLREGWISRASAEQRRGRAGRTGPGICYRMYPEAVLDALAPHAAPEVTRVPLEGVLLQVR 1674
            R+   AL  F  F  +Q  A  A++  +RAALPIA Y   ++ A+ +++V +VAG+TGCGKSTQVPQ+LL AG+  VACTQPRR++ V+L +RVS E+  +YG  VGY+IRF+++ +AATR+VFLTEG+LLR+   DP L  Y ++I DEVHERHL  DF+LG+LR  L    DLKLVLMSATI+ +LFS YFGGAP V+VPGR + + V Y      + + P                                   D RP+ R+L  ID    AEERGDLL+FLSG +++ AV +AA+                   RW+ L LH +L   EQD+ F   PPG RKCI++TN+AE++VTI+GVRFV DSG+ KEM++D +   ++RL+E WISRASAEQR+GRAGRTGPG+CYR+Y E+  +A AP+A PE+ RV L+ ++LQ++
Sbjct:  105 REFRSALLHFLDFGQKQSFARLARLQQERAALPIARYREHLLRALTQSQVVVVAGDTGCGKSTQVPQYLLAAGYEHVACTQPRRIACVALAKRVSYESLQQYGEQVGYQIRFESTRSAATRVVFLTEGLLLRQAQRDPTLPGYRVLIADEVHERHLQGDFLLGVLRRLLPARPDLKLVLMSATINLRLFSTYFGGAPVVQVPGRLFPITVLY------QPIPPEEAAAAGGRGRAER--------------------LDPRPYLRVLQAIDHKYPAEERGDLLIFLSGAAEIGAVLEAAQV------------YAARTQRWVALPLHSTLSVAEQDKVFDVPPPGVRKCIVSTNIAETSVTIDGVRFVVDSGKVKEMSYDPKAK-LQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYEAFAPYAVPEIQRVALDALVLQMK 512

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BLAST of jgi.p|Trimin1|157744 vs. uniprot
Match: A0A8C3GJ77_CAIMO (DExH-box helicase 34 n=1 Tax=Cairina moschata domestica TaxID=1240228 RepID=A0A8C3GJ77_CAIMO)

HSP 1 Score: 392 bits (1006), Expect = 2.160e-120
Identity = 221/442 (50.00%), Postives = 288/442 (65.16%), Query Frame = 1

Query:  349 ALALFAAFRARQQRAAAAQVATDRAALPIADYEAAIVDAVGRNRVTIVAGETGCGKSTQVPQFLLQAGHRRVACTQPRRLSAVSLCRRVSQETQDRYGAGVGYKIRFDASATAATRIVFLTEGVLLRELSGDPDLSAYDIVICDEVHERHLTCDFMLGLLRAALARSADLKLVLMSATIDAQLFSDYFGGAPTVRVPGRTYQVDVEYFGGALARHVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPFDARPFARLLAHIDATVAAEERGDLLVFLSGMSDMLAVRDAARAGXXXXXXXXXXXXXXXXARWIVLLLHGSLEAEEQDRAFARAPPGARKCILATNVAESAVTIEGVRFVADSGRAKEMTWDARGGGVRRLREGWISRASAEQRRGRAGRTGPGICYRMYPEAVLDALAPHAAPEVTRVPLEGVLLQVR 1674
            AL L+  F  ++  A  A++  +R ALPIA     ++ AV  N+V +VAG+TGCGKSTQVPQFLL AG+RRVACTQPRR++ VSL +RV+ E+  +YG  VGY+IRF++S + AT IVFLTEG+LLR+   +P L AY ++I DEVHERHL  DF+LG+LR  L    DLKLVLMSATI+ +LFSDYFGGAP ++VPGR + + V Y                                              D RP+ R+L  ID     EERGDLLVFLSG++++ AV++AA+                   RWIVL LH +L   EQD+ F   PPG RKCILATN+AE++VTI+GVRFV DSG+ KEM++D +G  ++RL+E WISRASAEQR+GRAGRTGPG+CYR+Y E+  DA  P+  PE+ RV L+ ++LQV+
Sbjct:  114 ALLLYLDFEQKRSFAKLAKLQRERQALPIARARRQLLQAVAGNQVVVVAGDTGCGKSTQVPQFLLAAGYRRVACTQPRRIACVSLAKRVAFESLQQYGDQVGYQIRFESSRSPATSIVFLTEGLLLRQAQREPALPAYGVIIADEVHERHLHGDFLLGVLRRLLPARPDLKLVLMSATINIRLFSDYFGGAPVLQVPGRIFPISVIY----------------------------EPIPKEEVAAAAGKPERLDPRPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVQEAAQV------------YATQTQRWIVLPLHSTLSVSEQDKVFDVPPPGVRKCILATNIAETSVTIDGVRFVLDSGKVKEMSYDPQGK-LQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFPPYPVPEIQRVALDALVLQVK 514

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|157744 vs. uniprot

BLAST of jgi.p|Trimin1|157744 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CDP1_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D8LEZ4_ECTSI	1.610e-133	50.94	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
UPI00115610A9	2.750e-123	48.14	probable ATP-dependent RNA helicase DHX34 n=1 Tax=...	[more]
A0A6P9DF68_PANGU	2.200e-121	48.64	probable ATP-dependent RNA helicase DHX34 isoform ...	[more]
A0A8J4K430_EUDMI	3.720e-121	48.21	Putative ATP-dependent RNA helicase DHX34 (Fragmen...	[more]
A0A7K7BJT6_9AVES	7.790e-121	48.45	DHX34 helicase (Fragment) n=1 Tax=Nothoprocta orna...	[more]
UPI0015D5EB47	8.510e-121	50.00	probable ATP-dependent RNA helicase DHX34 n=1 Tax=...	[more]
UPI001C67EC2F	1.170e-120	48.33	probable ATP-dependent RNA helicase DHX34 n=1 Tax=...	[more]
A0A8D0L8D0_SPHPU	1.990e-120	48.32	DExH-box helicase 34 n=5 Tax=Sphenodon punctatus T...	[more]
A0A8C3GJ77_CAIMO	2.160e-120	50.00	DExH-box helicase 34 n=1 Tax=Cairina moschata dome...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_4	contig	Contig_4:1134226..1139579 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|157744\|e_gw1.4.191.1
BRITE	ko00000,ko01000,ko03019
KEGG ko	ko:K20101
EC	3.6.4.13
GOs	GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019439,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0034641,GO:0034655,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0045934,GO:0046483,GO:0046700,GO:0048518,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0061013,GO:0065007,GO:0070035,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902369,GO:1902373,GO:1903311,GO:1903312,GO:2000622,GO:2000623
Preferred name	DHX34
Description	helicase activity
COG category	L
Max annot lvl	2759\|Eukaryota
EggNOG OGs	COG1643@1\|root,KOG0922@2759\|Eukaryota
Evalue	2.64e-134
Seed ortholog	2880.D8LEZ4
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Helicase, C-terminal
Ec32 ortholog	Ec-21_006120.1
TranscriptId	158066
Track	FilteredModels1
ProteinId	157744

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|157744	gene_1656	Tribonema minus UTEX_B_3156	gene	Contig_4 1134226..1139579 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|157744	Trimin1\|157744\|e_gw1.4.191.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_4 1134226..1139579 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_1656_1	exon_1656_1	Tribonema minus UTEX_B_3156	exon	Contig_4 1134226..1134750 +
exon_1656_2	exon_1656_2	Tribonema minus UTEX_B_3156	exon	Contig_4 1135225..1135334 +
exon_1656_3	exon_1656_3	Tribonema minus UTEX_B_3156	exon	Contig_4 1136274..1136421 +
exon_1656_4	exon_1656_4	Tribonema minus UTEX_B_3156	exon	Contig_4 1137131..1137249 +
exon_1656_5	exon_1656_5	Tribonema minus UTEX_B_3156	exon	Contig_4 1137844..1138176 +
exon_1656_6	exon_1656_6	Tribonema minus UTEX_B_3156	exon	Contig_4 1138285..1138592 +
exon_1656_7	exon_1656_7	Tribonema minus UTEX_B_3156	exon	Contig_4 1139326..1139579 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_1656	CDS_1656	Tribonema minus UTEX_B_3156	CDS	Contig_4 1134226..1134750 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_4:1134226..1139579+
coding sequence from alignment at Contig_4:1134226..1139579+

spliced messenger RNA

>mRNA_1656 ID=mRNA_1656|Name=jgi.p|Trimin1|157744|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1797bp|location=Sequence derived from alignment at Contig_4:1134226..1139579+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTGGCAGGACAGGGGGTGCAGGACCCTGCTGGAGACGTACGCCTTCCG
CACAGCGCGCCTGGAGGGAGCAGCGGAGGAGCAGGAGCTGTGCGACTTTC
TGGAGCGCTTCCTCAGAGCCAGGAGCGTCAAACAGCAGCAGCAGCAGCAG
CGGCGGCAGCAGGGAGCCGCTGCGCTGCCGCCCCTGCCGCCGCCGCAGGC
CCCCGAGCAGCAGCAGCAGCGGCGGCAGCAGCAGCAGCGCCCGCTGATCG
ACGCCGCGGCCGTGGAGCGCTCGCGCCACGCGCACCTGCTGCAGCACGCG
CTCGTGCGCGCGCTGCTGCGGGCGGGCCCGCAGCGCGACCTTGAGCGCGC
GCTGGCGCTGTTTGCGGCGTTCCGCGCACGGCAGCAGCGCGCGGCGGCGG
CGCAGGTGGCGACGGACCGCGCGGCGCTGCCGATCGCCGACTACGAGGCG
GCGATCGTGGACGCCGTCGGGCGCAACCGGGTGACCATCGTCGCGGGGGA
GACGGGCTGCGGGAAGAGCACGCAGGTGCCACAGTTCCTGCTGCAGGCCG
GCCACCGGCGCGTGGCGTGCACGCAGCCGCGCCGCCTGTCCGCGGTCAGC
CTGTGCCGGCGCGTCTCGCAGGAGACGCAGGACAGGTACGGCGCCGGCGT
GGGCTACAAGATCCGCTTCGACGCGTCCGCGACGGCGGCGACGCGCATCG
TCTTCCTCACAGAGGGCGTGCTGCTGCGCGAGCTGTCCGGGGACCCCGAC
CTGTCAGCTTACGACATTGTCATCTGCGACGAGGTCCACGAGCGCCACCT
CACGTGCGACTTCATGCTGGGGCTGCTACGCGCGGCGCTGGCGCGGAGCG
CTGACCTCAAGCTGGTGCTCATGTCAGCCACCATCGACGCTCAGCTATTC
AGCGACTATTTCGGCGGCGCGCCAACGGTGCGCGTCCCGGGCCGCACGTA
CCAGGTCGACGTCGAGTACTTCGGCGGCGCGCTCGCGCGGCACGTGGCGC
CGCCGCCGCCGCCGCCGCTGCTGCCGCCGCCGCCGCCTGGCGCCGCCGCC
GCCGCGCTCGTGGCGCCACCGCAGCAGCAGCAGCGGCAGCGGCGGCGCGC
ACCATTCGACGCGCGGCCGTTCGCGCGCCTGCTGGCGCACATCGACGCGA
CCGTCGCCGCGGAGGAGCGCGGCGACCTCCTCGTCTTCCTCAGCGGCATG
AGCGACATGCTCGCGGTGCGCGACGCCGCGCGTGCCGGCGGCGGCGGCGG
CGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGCGCGCTGGATCG
TCCTGCTGCTGCACGGCAGCCTGGAGGCGGAGGAGCAGGACCGCGCGTTC
GCGCGCGCGCCGCCGGGCGCGCGCAAGTGCATCCTCGCCACCAATGTCGC
CGAGTCGGCGGTGACAATAGAGGGCGTGCGCTTCGTGGCGGACTCGGGGC
GCGCCAAGGAGATGACGTGGGACGCGCGCGGCGGCGGCGTGCGGCGCCTG
CGCGAGGGGTGGATCAGCCGCGCGAGCGCAGAGCAGCGGCGCGGGCGCGC
GGGGCGCACCGGCCCCGGCATCTGCTACCGCATGTACCCGGAGGCGGTGC
TGGACGCGCTCGCGCCGCATGCCGCGCCGGAGGTCACGCGCGTGCCGCTG
GAGGGCGTGCTGCTGCAGGTGAGGGGTAGGTATAGGGCCTGTAGGGTAAG
GGTACGCGCTGGCCGCGCTCGCGCCGCACGCCGCGCCGGAGGTCACGCGC
GTGCCGCTGGAGGGCGTGCTGCTGCAGGTGAGGGGTATAAAGTTTAA

protein sequence of jgi.p|Trimin1|157744

>Trimin1|157744|e_gw1.4.191.1 ID=Trimin1|157744|e_gw1.4.191.1|Name=jgi.p|Trimin1|157744|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=599bp
MWQDRGCRTLLETYAFRTARLEGAAEEQELCDFLERFLRARSVKQQQQQQ
RRQQGAAALPPLPPPQAPEQQQQRRQQQQRPLIDAAAVERSRHAHLLQHA
LVRALLRAGPQRDLERALALFAAFRARQQRAAAAQVATDRAALPIADYEA
AIVDAVGRNRVTIVAGETGCGKSTQVPQFLLQAGHRRVACTQPRRLSAVS
LCRRVSQETQDRYGAGVGYKIRFDASATAATRIVFLTEGVLLRELSGDPD
LSAYDIVICDEVHERHLTCDFMLGLLRAALARSADLKLVLMSATIDAQLF
SDYFGGAPTVRVPGRTYQVDVEYFGGALARHVAPPPPPPLLPPPPPGAAA
AALVAPPQQQQRQRRRAPFDARPFARLLAHIDATVAAEERGDLLVFLSGM
SDMLAVRDAARAGGGGGGGGGGGGGGGGGARWIVLLLHGSLEAEEQDRAF
ARAPPGARKCILATNVAESAVTIEGVRFVADSGRAKEMTWDARGGGVRRL
REGWISRASAEQRRGRAGRTGPGICYRMYPEAVLDALAPHAAPEVTRVPL
EGVLLQVRGRYRACRVRVRAGRARAARRAGGHARAAGGRAAAGEGYKV*

mRNA from alignment at Contig_4:1134226..1139579+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_1656 ID=mRNA_1656|Name=jgi.p|Trimin1|157744|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5354bp|location=Sequence derived from alignment at Contig_4:1134226..1139579+ (Tribonema minus UTEX_B_3156 )
ATGTGGCAGGACAGGGGGTGCAGGACCCTGCTGGAGACGTACGCCTTCCG
CACAGCGCGCCTGGAGGGAGCAGCGGAGGAGCAGGAGCTGTGCGACTTTC
TGGAGCGCTTCCTCAGAGCCAGGAGCGTCAAACAGCAGCAGCAGCAGCAG
CGGCGGCAGCAGGGAGCCGCTGCGCTGCCGCCCCTGCCGCCGCCGCAGGC
CCCCGAGCAGCAGCAGCAGCGGCGGCAGCAGCAGCAGCGCCCGCTGATCG
ACGCCGCGGCCGTGGAGCGCTCGCGCCACGCGCACCTGCTGCAGCACGCG
CTCGTGCGCGCGCTGCTGCGGGCGGGCCCGCAGCGCGACCTTGAGCGCGC
GCTGGCGCTGTTTGCGGCGTTCCGCGCACGGCAGCAGCGCGCGGCGGCGG
CGCAGGTGGCGACGGACCGCGCGGCGCTGCCGATCGCCGACTACGAGGCG
GCGATCGTGGACGCCGTCGGGCGCAACCGGGTGACCATCGTCGCGGGGGA
GACGGGCTGCGGGAAGAGCACGCAGGTGCGGCAGCGCTCGCCCGGCCTGG
TTTAGTACAATTAGTACTTCTATGTATGGAAACGAGTCAAACTATCGTAG
AGCTCTATGTATGTTCACATGTGTAATACATCATATATGACCTAGTTCGC
AGTACACGTAGAAAGTTATGTGTATACATTTATGAGTGGCTGCGCTAAGG
TGTGCTGCTGTCATTGCGCATTGCCCGGTTGGCAACTTGCAGGGTGGTCA
AGGCCGTTGTTGCACTGCGCAGTGCCATGTGGTGGGAGAAGCGGCTGTAC
CCCAGCAGCAGCAGCGCGCTGCCTGAAGGCGGGCCTGCCGCTCGCGGTTC
ATCATCATGTAGCGGCCTCGGGCGAATGTTCAGCATCCCTTGTTGGTGTG
CATGTGTAAGCTTTGAATCACTTGCCCATGTGAGCCATCCCCGCATCCGG
ACGCCAGCAGCAGTAACTTCAAGTGTGCACATCCGCGCCGCCGCCGCAGG
TGCCACAGTTCCTGCTGCAGGCCGGCCACCGGCGCGTGGCGTGCACGCAG
CCGCGCCGCCTGTCCGCGGTCAGCCTGTGCCGGCGCGTCTCGCAGGAGAC
GCAGGACAGGTACCACTTCAAGTTGAACTTGCAGTTTGTGACCTGCGAAC
CAGCGCGCTATCATGTGTGCCTGCGCAATTTGCTTGGCACGTAGTGCTGG
GGCACGGCAGTGACGCGTAGTGACAGTGCGCATCGCCAGACGTGCAGGAG
CTATTGGTGCTACGACGCTGTCGTGGGGTGTTGAGCGCTGCTGTCAGCGG
CGCGCAGCAGAGCTCAGGCAGTCCGTGTGCACCGTCTGCCGCAGCGCACG
CAGGCGACGCGCAGGCATGTGCCTGCATGCAGTTCCGTGTGCGCCTCTGT
AGCACGCCTCTGTGAACACGCCACCCCTGCATAGGTCCGGTGCGCGCGCG
CTGCGCACCGTTCATCTTCCCCTCGACACCAGTCCAGTCGGCGGTTTCGT
GCCGCCCGCCGCGGCCCTAGAGCTGAGCTGAGCCGCGCTGCCAATCAATT
GAAACTTTCCCATCACAGTCGATGAATTGAATGAGGCACGGGGTGACCCG
TGCATGTCCGTGAGGGAACATGCCAGCGCATGACACATGCGCACGGCAGG
CGTCAGCTGAGCGTTGCAGCGCACTTGCGCGCAGGCGCGGGCTCTACCGC
ACACACCATCACGTCACCGCTGGGACGCGGCGCGCGCGCGCGCGCGCGCG
ACCTCGCCGCGTCGATCCGACTTCAAGGCTGGCGAGCACAGCGCTCAGCC
AACTCTATCTAACCCAGCGTGGCGATGCGAGTCGTCGCACCGCATCCACA
TGCTTCATGCATGTACTATACTTCAACTTGAGCATGTTTAGACTACGCAC
ACGCATTGTGCTGTACGTGTACGCACATCTAGTGCAGGTGCGGTCGCACC
GCATCCACATGCCTCATGCACATGCTATACTTCACATTCTGCGTGTTTAG
ACTACGCACGCGCATTTTTACTGTACCTGCATGAACATTTCGGTGCAGGT
ACGGCGCCGGCGTGGGCTACAAGATCCGCTTCGACGCGTCCGCGACGGCG
GCGACGCGCATCGTCTTCCTCACAGAGGGCGTGCTGCTGCGCGAGCTGTC
CGGGGACCCCGACCTGTCAGCTTACGACATTGTCATCTGCGACGAGGTGC
GCTGGCCACATGTACTGTAGGTATGAAGACGAATCCAAAGACGGTAGAGC
TCTAGGTGGCAAGGGAGGGTGAGCCGCAAGTGCCTGCCAATGATGACCGT
GGTGTGCAGCGTGTGCCCTGGCGCGACGCGGTCATCTCACATGCCACGCA
TGCGGTCCACGGCGGCGGGGCGCGGTTGACGCGGCGTGTACCCGTATGAT
GTGATAATTCGCGACGAGGTGCGGTTGCCATATGGAGTGTAGGCCGATTG
CCGCAGCAGCGGCGACAACGGTTTCATTGGCGGAAGGCATTCAGTTTGAC
GGCTGACCACGCGTTGTCACGTAGAGCTCTGCGGTCTTTTGTTTCGTTTC
CTTGTAGTGTAGGTATGCAGCGTGTGCCCTGGCGCGACGCGGTCATCTCA
CATATCGAGCATGCGGGCCACGGCGGCGGGGGCGCAATGGCACGGTGTAC
CTGTATGTGTGGGGTATGTAGGTATGGGCATGTAGCGCCTGCCTGCGGTG
TACGTGCATCATGTATGCGTCATGGAATCGCGTGAGTACGGGTTACCGAT
GGTGTATGCATGCACAGGCGTGCAGCGGCTTGAACCTCAACTCTTCTCCC
AACTGCTCTTGCCGCCCGCCACACTGCTCCGCGTTGCATGCCAAACTCTA
ACCCTAGTTTGTGTCAGCGGCCACACCCTAACCCCACTTGCTGTCAACCG
CGCAGGTCCACGAGCGCCACCTCACGTGCGACTTCATGCTGGGGCTGCTA
CGCGCGGCGCTGGCGCGGAGCGCTGACCTCAAGCTGGTGCTCATGTCAGC
CACCATCGACGCTCAGCTATTCAGGTCGCCAGAGTCTCATTGATAGTGCT
AGTGCTGTACATATATACATATACTCAAGAATTCACAACTAGTGCTGGCC
GTAAGCTGATTCTCATGTCCGCCAAATTTGATGCGCGGCTTTTCAGGTCG
CCGCATTCGCCTTGATGCTACTTCTCCGTGTATGCTGTCAAAGCGTCACG
CGCAGTGCCGAGCTCAAGCTGGTGCCCGTGTTTGCCATCATTGATACTCA
GCCGTACAGGTCACCAAAACCTCATTGTTAGTGTGAAGGAGTCGCATGCT
CAGCTGTTCGGTCACTGCACCTGCCTTTTCTTTCAAACACTGTTGAGGAA
TGGATCCTCGAGATGGTGCTAGCCTTGTCTGCCACCATCGACGCTCAGCT
ACTCAGGTCACCACGCTTGCCTTGTTAGTGTGGAGGGATCGTGACGCGGC
CCTGCTGAGAGTCCGTCTCCCACAGTCCCAACGGCGGAACCGGCCGTGCA
CGCATGGCGCGGCTGCGTCGATAACGCTGCGGAGCGCTGAGTCACCCCCC
CCCCCCCCCCCCCTCGGCGGAAGCACGCCCCTCACCCCCCCCCCCCCCCC
CCCCCCCGGGGCCTGCAGCGACTATTTCGGCGGCGCGCCAACGGTGCGCG
TCCCGGGCCGCACGTACCAGGTCGACGTCGAGTACTTCGGCGGCGCGCTC
GCGCGGCACGTGGCGCCGCCGCCGCCGCCGCCGCTGCTGCCGCCGCCGCC
GCCTGGCGCCGCCGCCGCCGCGCTCGTGGCGCCACCGCAGCAGCAGCAGC
GGCAGCGGCGGCGCGCACCATTCGACGCGCGGCCGTTCGCGCGCCTGCTG
GCGCACATCGACGCGACCGTCGCCGCGGAGGAGCGCGGCGACCTCCTCGT
CTTCCTCAGCGGCATGAGCGACATGCTCGCGGTGCGCGACGCCGCGCGTG
CGTACGCGGAGCAGACGCAGCAGGACGGCGGCGGCGGCGGCGGCGGCACT
GGACCTCGCAGCAGCGGCGCCGCCGCCGCTACTGGCGGGGCGCGAGACGG
CGGCGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG
GCGGCGGCGGCGCGCGCTGGATCGTCCTGCTGCTGCACGGCAGCCTGGAG
GCGGAGGAGCAGGACCGCGCGTTCGCGCGCGCGCCGCCGGGCGCGCGCAA
GTGCATCCTCGCCACCAATGTCGCCGAGTCGGCGGTGACAATAGAGGGCG
TGCGCTTCGTGGCGGACTCGGGGCGCGCCAAGGAGATGACGTGGGACGCG
CGCGGCGGCGGCGTGCGGCGCCTGCGCGAGGGGTGGATCAGCCGCGCGAG
CGCAGAGCAGCGGCGCGGTGCGTCGCCGCCTGGTGCTTGAAGTATTCCAT
GTTGAAGTTGATGTGTAAGCTACCGAGTCACGTGCGTGAAGCGCGTGGCG
GCGGCGGCGTGCGGCGCCTGCGCGAGGGGTGGATCAGCCGCGCGAGCGCG
GAGCAGCGGCGCGGTGCGTCGCCGCCGCCAGTTGACAATTTCAAGGTGTT
GTAGGAGTCACCGGCTCCGCAAAGGAACTGTTGGGGCGTGCACACCTGTC
CGCGCGGTGTAGGTAGGTAGCTGCGGCTGTCTAAGATGTACGCGAGACAC
ACCACCTCGGGCAGCGGCGGAGGCGGCCTTGCGCGCCTCTCCTGCTGGCC
AATCATACGTCCTGAACCGGCACGCGACAGTGTACTTCACTGCGTGATGG
GCGGCTTGGTGCCGCCACGGTCAGTTAGCACGGCTGCTGTGTCATGACCA
AGTCCCCGGTGCCAAAGTGCCCGGGGAGGACCACGCTTTGCCGACGAGCA
ATGCGATTGCTGATTGCTCGACCCATTGTGCAGAGCGCCAGTGCGCCTGC
CTCTGCTGCTGGTGCCCCTGCTGCCGCCGCCGCTGGCGCTGGTGCCACTG
CTGCTGCCGCTGCGGTTTCGCCGCCTCTGGCACTTCTTGTTGGCCTAGCG
CTGCGTCGAGTTGAGTCAATTCGCGCCAGTCTGCCCAAGAAGTACTGACT
GTGGCTTACTCTTACATATGTGCGTGTGCTGTTGCCGAGCGCTGCCGCAG
GGCGCGCGGGGCGCACCGGCCCCGGCATCTGCTACCGCATGTACCCGGAG
GCGGTGCTGGACGCGCTCGCGCCGCATGCCGCGCCGGAGGTCACGCGCGT
GCCGCTGGAGGGCGTGCTGCTGCAGGTGAGGGGTAGGTATAGGGCCTGTA
GGGTAAGGGTACGCGCTGGCCGCGCTCGCGCCGCACGCCGCGCCGGAGGT
CACGCGCGTGCCGCTGGAGGGCGTGCTGCTGCAGGTGAGGGGTATAAAGT
TTAA

Coding sequence (CDS) from alignment at Contig_4:1134226..1139579+

>mRNA_1656 ID=mRNA_1656|Name=jgi.p|Trimin1|157744|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1797bp|location=Sequence derived from alignment at Contig_4:1134226..1139579+ (Tribonema minus UTEX_B_3156 )
ATGTGGCAGGACAGGGGGTGCAGGACCCTGCTGGAGACGTACGCCTTCCG
CACAGCGCGCCTGGAGGGAGCAGCGGAGGAGCAGGAGCTGTGCGACTTTC
TGGAGCGCTTCCTCAGAGCCAGGAGCGTCAAACAGCAGCAGCAGCAGCAG
CGGCGGCAGCAGGGAGCCGCTGCGCTGCCGCCCCTGCCGCCGCCGCAGGC
CCCCGAGCAGCAGCAGCAGCGGCGGCAGCAGCAGCAGCGCCCGCTGATCG
ACGCCGCGGCCGTGGAGCGCTCGCGCCACGCGCACCTGCTGCAGCACGCG
CTCGTGCGCGCGCTGCTGCGGGCGGGCCCGCAGCGCGACCTTGAGCGCGC
GCTGGCGCTGTTTGCGGCGTTCCGCGCACGGCAGCAGCGCGCGGCGGCGG
CGCAGGTGGCGACGGACCGCGCGGCGCTGCCGATCGCCGACTACGAGGCG
GCGATCGTGGACGCCGTCGGGCGCAACCGGGTGACCATCGTCGCGGGGGA
GACGGGCTGCGGGAAGAGCACGCAGGTGCCACAGTTCCTGCTGCAGGCCG
GCCACCGGCGCGTGGCGTGCACGCAGCCGCGCCGCCTGTCCGCGGTCAGC
CTGTGCCGGCGCGTCTCGCAGGAGACGCAGGACAGGTACGGCGCCGGCGT
GGGCTACAAGATCCGCTTCGACGCGTCCGCGACGGCGGCGACGCGCATCG
TCTTCCTCACAGAGGGCGTGCTGCTGCGCGAGCTGTCCGGGGACCCCGAC
CTGTCAGCTTACGACATTGTCATCTGCGACGAGGTCCACGAGCGCCACCT
CACGTGCGACTTCATGCTGGGGCTGCTACGCGCGGCGCTGGCGCGGAGCG
CTGACCTCAAGCTGGTGCTCATGTCAGCCACCATCGACGCTCAGCTATTC
AGCGACTATTTCGGCGGCGCGCCAACGGTGCGCGTCCCGGGCCGCACGTA
CCAGGTCGACGTCGAGTACTTCGGCGGCGCGCTCGCGCGGCACGTGGCGC
CGCCGCCGCCGCCGCCGCTGCTGCCGCCGCCGCCGCCTGGCGCCGCCGCC
GCCGCGCTCGTGGCGCCACCGCAGCAGCAGCAGCGGCAGCGGCGGCGCGC
ACCATTCGACGCGCGGCCGTTCGCGCGCCTGCTGGCGCACATCGACGCGA
CCGTCGCCGCGGAGGAGCGCGGCGACCTCCTCGTCTTCCTCAGCGGCATG
AGCGACATGCTCGCGGTGCGCGACGCCGCGCGTGCCGGCGGCGGCGGCGG
CGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGCGCGCTGGATCG
TCCTGCTGCTGCACGGCAGCCTGGAGGCGGAGGAGCAGGACCGCGCGTTC
GCGCGCGCGCCGCCGGGCGCGCGCAAGTGCATCCTCGCCACCAATGTCGC
CGAGTCGGCGGTGACAATAGAGGGCGTGCGCTTCGTGGCGGACTCGGGGC
GCGCCAAGGAGATGACGTGGGACGCGCGCGGCGGCGGCGTGCGGCGCCTG
CGCGAGGGGTGGATCAGCCGCGCGAGCGCAGAGCAGCGGCGCGGGCGCGC
GGGGCGCACCGGCCCCGGCATCTGCTACCGCATGTACCCGGAGGCGGTGC
TGGACGCGCTCGCGCCGCATGCCGCGCCGGAGGTCACGCGCGTGCCGCTG
GAGGGCGTGCTGCTGCAGGTGAGGGGTAGGTATAGGGCCTGTAGGGTAAG
GGTACGCGCTGGCCGCGCTCGCGCCGCACGCCGCGCCGGAGGTCACGCGC
GTGCCGCTGGAGGGCGTGCTGCTGCAGGTGAGGGGTATAAAGTTTAA