mRNA_16502 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|178057
Unique NamemRNA_16502
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|178057 vs. uniprot
Match: A0A835Z5Y7_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Y7_9STRA)

HSP 1 Score: 647 bits (1669), Expect = 5.610e-233
Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 1 
Query:    1 MWLSPRQLDGVELEPLSVAVVQSPRFTAQPAKFLWHHSSVSSDGGLTSSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSTSPIDSSSSADRVRPDHWMVGENIGSGSFGRVYKAMNADSGVEFAVKEVAISSSRTNESGLEELTREIMMMQALSHPNVVRYLGFEVHTADAKLLIFQEWVPGNSLSSRLATYGKFSDAMTRRYVRQLLTGLAYLHDHGVMHNDLKCENLLLDKGGVVKLADFGTAARISDTGAQQGGRLGTPYFMAPEIIINREYTPKADMWSVGGAVLQMTTLAAPWQGMGFRTPVQLRRHMAATRAPPPIAPCVAPPLRALMLRCFARAPAERPDARTLLADPFLS 1122
            MWLSPRQLDGVELEPLSVAVVQSPRFTAQPAKFLWHHSSVSSDGGLTSSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSTSPIDSSSSADRVRPDHWMVGENIGSGSFGRVYKAMNADSGVEFAVKEVAISSSRTNESGLEELTREIMMMQALSHPNVVRYLGFEVHTADAKLLIFQEWVPGNSLSSRLATYGKFSDAMTRRYVRQLLTGLAYLHDHGVMHNDLKCENLLLDKGGVVKLADFGTAARISDTGAQQGGRLGTPYFMAPEIIINREYTPKADMWSVGGAVLQMTTLAAPWQGMGFRTPVQLRRHMAATRAPPPIAPCVAPPLRALMLRCFARAPAERPDARTLLADPFLS
Sbjct:    1 MWLSPRQLDGVELEPLSVAVVQSPRFTAQPAKFLWHHSSVSSDGGLTSSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSTSPIDSSSSADRVRPDHWMVGENIGSGSFGRVYKAMNADSGVEFAVKEVAISSSRTNESGLEELTREIMMMQALSHPNVVRYLGFEVHTADAKLLIFQEWVPGNSLSSRLATYGKFSDAMTRRYVRQLLTGLAYLHDHGVMHNDLKCENLLLDKGGVVKLADFGTAARISDTGAQQGGRLGTPYFMAPEIIINREYTPKADMWSVGGAVLQMTTLAAPWQGMGFRTPVQLRRHMAATRAPPPIAPCVAPPLRALMLRCFARAPAERPDARTLLADPFLS 374
[Close]
BLAST of jgi.p|Trimin1|178057 vs. uniprot
Match: A0A835Z4I6_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4I6_9STRA)

HSP 1 Score: 383 bits (983), Expect = 3.370e-128
Identity = 202/293 (68.94%), Postives = 225/293 (76.79%), Query Frame = 1 
Query:  283 STSPIDSSSSA---DRVRPDHWMVGENIGSGSFGRVYKAMNADSGVEFAVKEVAISSSRTNESGLEELTREIMMMQALSHPNVVRYLGFEVHTADAKLLIFQEWVPGNSLSSRLATYGKFSDAMTRRYVRQLLTGLAYLHDHGVMHNDLKCENLLLDKGGVVKLADFGTAARISDTGAQQGG----------RLGTPYFMAPEIIINREYTPKADMWSVGGAVLQMTTLAAPWQGMGFRTPVQLRRHMAATRAPPPIAPCVAPPLRALMLRCFARAPAERPDARTLLADPFLS 1122
            S S   SSSS      +RP  W  GE IGSGSFG+VYKAMN+DSGVEFAVKEV++S   T E  L+ LTREI +M+ L + ++VRYLGFEV   DAKLLIFQEWVPGNSLSSRL+TYGKFS AMTRRY RQ+L GLAYLH HGVMH D+KCENLLLDKGGVVKLADFGTAA+IS+TGAQ             RLGTPYFMAPE++I R YTPKAD+WSVGGAVLQMTTL APWQGMGFRTPVQL+RHMAA R PP +   V  PLR  M RCFA AP +RP A  L  DPFL+
Sbjct:  115 SASSHTSSSSCPGHQPIRPGRWRRGELIGSGSFGKVYKAMNSDSGVEFAVKEVSVSLLGTQEDCLDGLTREIEVMRGLQNEHIVRYLGFEVSQVDAKLLIFQEWVPGNSLSSRLSTYGKFSTAMTRRYTRQILCGLAYLHGHGVMHMDIKCENLLLDKGGVVKLADFGTAAKISETGAQXXXXXXXXXXXXXRLGTPYFMAPEVLIARRYTPKADIWSVGGAVLQMTTLRAPWQGMGFRTPVQLQRHMAAFRLPPALPRGVPAPLRDFMRRCFAWAPEDRPAAAALALDPFLA 407
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BLAST of jgi.p|Trimin1|178057 vs. uniprot
Match: A0A835YLD7_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLD7_9STRA)

HSP 1 Score: 244 bits (622), Expect = 1.640e-74
Identity = 130/269 (48.33%), Postives = 166/269 (61.71%), Query Frame = 1 
Query:  319 RVRPDHWMVGENIGSGSFGRVYKAMNADSGVEFAVKEVAISSSRTNESGLEELTREIMMMQALSHPNVVRYLGFEVHTADAKLLIFQEWVPGNSLSSRLATYGKFSDAMTRRYVRQLLTGLAYLHDHGVMHNDLKCENLLLDKGGVVKLADFGTAARISDTGAQQGGRL-GTPYFMAPEIIINREYTPKADMWSVGGAVLQMTTLAAPWQGMGFRTPVQLRRHMAATRA-PPPIAPCVAPPLRALMLRCFARAPAERPDARTLLADPFL 1119
            RVRP  W +G  I  GSFG VY  +N  +G   AVK +++  S   E  + EL RE+ +M+  SHPN+V YLG E+   D +L IFQEWVPG S+SS L  +G FS+ MTRRY RQ L GL YLH H V+H D+K  N+L+D  G VKLADFG +  +SD     GG L GTPYFMAPE++  + + P  D+WS GGA+LQM T   PW   G  TP  L + M   +  PPP+   ++P L A++ RCF+  PA RP A  L  D FL
Sbjct:   85 RVRPGKWKLGNRIARGSFGVVYMGLNEVTGELMAVKVLSLHGS---ERDMRELHREMALMRQFSHPNIVSYLGAEIREEDGQLCIFQEWVPGGSVSSLLRRFGPFSEDMTRRYTRQALRGLTYLHQHQVVHRDIKGSNILVDDRGTVKLADFGASICVSDPADAGGGALKGTPYFMAPEVLQRKPHGPLVDIWSFGGAILQMVTGEPPWYSAGVSTPYALLQTMLERKGQPPPLPANLSPSLAAMLRRCFSWDPALRPSAAQLELDAFL 350
[Close]
BLAST of jgi.p|Trimin1|178057 vs. uniprot
Match: A0A835YLS7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS7_9STRA)

HSP 1 Score: 236 bits (601), Expect = 1.870e-72
Identity = 131/271 (48.34%), Postives = 167/271 (61.62%), Query Frame = 1 
Query:  319 RVRPDHWMVGENIGSGSFGRVYKAMNADSGVEFAVKEVAISSSRTNESGLEELTREIMMMQALSHPNVVRYLGFEVHTADAKLLIFQEWVPGNSLSSRLATYGKFSDAMTRRYVRQLLTGLAYLHDHGVMHNDLKCENLLLDKGGVVKLADFGTAARISDT-GAQQGGRL-GTPYFMAPEIIINREYTPKADMWSVGGAVLQMTTLAAPWQGMGFRTPVQLRRHMAATRAP-PPIAPCVAPPLRALMLRCFARAPAERPDARTLLADPFLS 1122
            RV+P  W +G  I  GSFG VY  +N  +G   AVK   + S R ++  L EL RE+ +M+A SHPN+V YLG E+     +L IFQEWVPG S+SS L  +G FS+ MTR Y RQ L GLAYLH H V+H D+   N+L+D  GVVKLADFG + ++SD  G++  G L GTPYFMAPE++    +    D+WS GGAVLQM +   PW   G  TP  L + +   R   PP+   ++  LRA + RCF   PAERP A  L  DPFLS
Sbjct:    1 RVQPGKWKLGNRIARGSFGVVYMGLNEATGALMAVK---VLSLRGSDRDLHELHREMALMRAFSHPNIVSYLGAEIREEHDQLCIFQEWVPGGSVSSLLQRFGPFSEDMTRGYTRQALQGLAYLHSHHVVHRDINGSNILVDDHGVVKLADFGASLQLSDAAGSRADGALKGTPYFMAPEVLQRSAHGMPVDVWSFGGAVLQMVSGEPPWFSYGVSTPYALLQALLERRGQTPPLPADLSAGLRAFLERCFRWDPAERPTAAELALDPFLS 268
[Close]
BLAST of jgi.p|Trimin1|178057 vs. uniprot
Match: F0XXV1_AURAN (Protein kinase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXV1_AURAN)

HSP 1 Score: 234 bits (597), Expect = 9.640e-71
Identity = 128/284 (45.07%), Postives = 171/284 (60.21%), Query Frame = 1 
Query:  337 WMVGENIGSGSFGRVYKAMNADSGVEFAVKEVAISSSRTN-----------------ESGLEELTREIMMMQALSHPNVVRYLGFEVHTADAKLLIFQEWVPGNSLSSRLATYGKFSDAMTRRYVRQLLTGLAYLHDHGVMHNDLKCENLLLDKGGVVKLADFGTAARISDTGAQQGGRL----GTPYFMAPEIIINREYTPKADMWSVGGAVLQMTTLAAPWQGMGFRTPVQLRRHMAATRAPPPIAP-CVAPPLRALMLRCFARAPAERPDARTLLADPFLS 1122
            W +G+ IG GSFG VY  M+  +GV  AVK +AI +S                    ES L  L  EI +M++  HPN+VRYLG  V   + +L IFQEWVPG SL+S  A YG  S+ + RRY   +L GL YLH   ++H D+KC N+L+D+GGV KLADFG + R+   G           GTPYFMAPE++   ++  ++D+WSVGG +LQM T   PW+ M F+TP+ L  H+A+T  PPPI    ++ PLR ++LRCF R P +R  A  LL DPFL+
Sbjct:    2 WKLGKCIGQGSFGSVYTCMDEATGVLMAVKMMAIPTSSAPGGAGAPPQPRDGRPSKPESELRALCSEIEIMRSFEHPNIVRYLGAAVDEPNLQLYIFQEWVPGGSLASLSAHYGALSEPVVRRYTIHMLRGLEYLHAANIIHRDIKCGNVLVDEGGVAKLADFGASHRLGADGTLTADMKLTMRGTPYFMAPEVLQQDKFGRRSDVWSVGGVILQMATTHPPWKVMNFKTPMALFYHVASTTDPPPIDTYALSLPLRGIILRCFERDPEKRAHAAELLGDPFLA 285
[Close]
BLAST of jgi.p|Trimin1|178057 vs. uniprot
Match: A0A7S3UV54_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV54_HETAK)

HSP 1 Score: 237 bits (604), Expect = 4.210e-70
Identity = 124/274 (45.26%), Postives = 174/274 (63.50%), Query Frame = 1 
Query:  319 RVRPDHWMVGENIGSGSFGRVYKAMNADSGVEFAVKEVAISSSRTNESGLEELTREIMMMQALSHPNVVRYLGFEVHTADAKLLIFQEWVPGNSLSSRLATYGKFSDAMTRRYVRQLLTGLAYLHDHGVMHNDLKCENLLLDKGGVVKLADFGTAAR--ISDTGAQQ----GGRLGTPYFMAPEIIINREYTPKADMWSVGGAVLQMTTLAAPWQGMGFRTPVQLRRHMAATRAPPPIAPCVAPPLRALMLRCFARAPAERPDARTLLADPFLS 1122
            RV+P  W +G+ IG G FG VY  +  D+G   A+K +++       S L  L RE+ +M++L HPN+V Y G EV   +  L IFQ+WVPG S++S L  +G F + + R+Y +QLL GL YLH++ ++H D+K  N+L+D  GVVKLADFGT+ R  ISD   Q+    G   GTPYFMAPE+I+ ++Y  KAD+WS+GGAV++M T   PW+ +  R P++L R +     PP I   ++ PLR  + RCF R P ERP A+ LL D F+S
Sbjct:   86 RVQPGQWKIGQRIGQGKFGEVYVGLCEDTGQLIAIKIISLPGQT---SELATLYREVDLMRSLRHPNIVSYFGAEVSEEECSLCIFQQWVPGGSVASLLKKFGPFREHVVRKYTKQLLKGLRYLHNNKIIHRDIKGANILVDVTGVVKLADFGTSKRLEISDELMQETMAHGTMKGTPYFMAPEVIMRQKYGRKADIWSLGGAVMEMATGDPPWKSLQMRNPIELFRFIHTHTHPPNIDFSLSLPLRLFLERCFIRNPKERPSAKALLKDRFVS 356
[Close]
BLAST of jgi.p|Trimin1|178057 vs. uniprot
Match: D7G097_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G097_ECTSI)

HSP 1 Score: 236 bits (603), Expect = 7.740e-70
Identity = 124/270 (45.93%), Postives = 170/270 (62.96%), Query Frame = 1 
Query:  322 VRPDHWMVGENIGSGSFGRVYKAMNADSGVEFAVKEVAISSSRTNESGLEELTREIMMMQALSHPNVVRYLGFEVHTADAKLLIFQEWVPGNSLSSRLATYGKFSDAMTRRYVRQLLTGLAYLHDHGVMHNDLKCENLLLDKGGVVKLADFGTAARI---SDTGAQQGGRLGTPYFMAPEIIINREYTPKADMWSVGGAVLQMTTLAAPWQGMGFRTPVQLRRHMAATRAPPPIAPCVAPPLRALMLRCFARAPAERPDARTLLADPFLS 1122
            VR  HW +G  IG GSFG V+  +N DSG   AVK +++     N    EEL  EI +M+ L+HPN+V YLG EV+  +  + IFQEWVPG S+++ L  +G FSD     Y +Q+L GL YLH   V+H D+K  N+L+D  GVVKL DFG +  +   S TG  +  R+G+P FMAPEI++  EY P+ D+WS+GGAVL+M T   PW  +  RTPV L   +  T  PPP+   ++ PL   +LRCF R P++R  A+ LL+DPF++
Sbjct:   54 VRTGHWKLGHEIGKGSFGSVHIGLNEDSGDLIAVKLLSLK----NADQAEELYTEIELMRQLTHPNIVCYLGAEVNDKEKTISIFQEWVPG-SVTTLLVNFGPFSDRRIADYTKQILQGLVYLHSERVIHRDIKGGNILIDDRGVVKLCDFGASKLLDADSFTGLGEHTRVGSPLFMAPEILLREEYGPQVDIWSLGGAVLEMATGQPPWHTLNLRTPVALINWVKRTEGPPPLPDSLSQPLTKFLLRCFERNPSKRATAKELLSDPFVA 318
[Close]
BLAST of jgi.p|Trimin1|178057 vs. uniprot
Match: F0YL51_AURAN (Protein kinase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL51_AURAN)

HSP 1 Score: 224 bits (571), Expect = 2.270e-66
Identity = 119/292 (40.75%), Postives = 176/292 (60.27%), Query Frame = 1 
Query:  280 PSTSPIDSSSSADRVRPDH---------WMVGENIGSGSFGRVYKAMNADSGVEFAVKEVAISSSRTNESGLEELTREIMMMQALSHPNVVRYLGFEVHTADAKLLIFQEWVPGNSLSSRLATYGKFSDAMTRRYVRQLLTGLAYLHDHGVMHNDLKCENLLLDKGGVVKLADFGTAARISDTGA---QQGGRLGTPYFMAPEIIINREYTPKADMWSVGGAVLQMTTLAAPWQGMGFRTPVQLRRHMAATRAPPPIAPCVAPPLRALMLRCFARAPAERPDARTLLADPFL 1119
            PS S + +SSS+  ++ +          W  G+ IG+G+ GRVY  +  D+G   AVKE+  ++++ +   L ++  EI ++++L HPN+V YLG +V   D  L IF EWVPG S+ + +  +GK S+A+ R+YV QLL GL YLH+  V+H D+K  N+L+D  G +KLADFG++ R+   G    +     GTPYFMAPE+I+   +  KAD+WSVG  +LQM T   PW+ +   TP  L  H+A  +APPP+   ++  LR L+L  F+R    RP A  LL  PF+
Sbjct:   31 PSHSEVITSSSSAILKTEREKQSTERISWRKGDLIGTGANGRVYLGLEEDTGAIIAVKEILFTNNQQDLEELAQMQEEIELLRSLHHPNIVTYLGTDVSDDDQTLYIFTEWVPGGSIQALVTKFGKLSEAIVRKYVAQLLVGLDYLHEQQVIHRDIKAANILVDDRGTIKLADFGSSKRMDSMGTMGNENHSLRGTPYFMAPEVIMQTGHGRKADIWSVGCTILQMVTGQPPWKSLQLGTPAALMFHIANAQAPPPMPSALSDHLRNLLLATFSRDMNNRPTANQLLEYPFV 322
[Close]
BLAST of jgi.p|Trimin1|178057 vs. uniprot
Match: A0A8J2WWQ2_9STRA (Hypothetical protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWQ2_9STRA)

HSP 1 Score: 221 bits (562), Expect = 1.030e-63
Identity = 118/267 (44.19%), Postives = 165/267 (61.80%), Query Frame = 1 
Query:  337 WMVGENIGSGSFGRVYKAMNADSGVEFAVKEVAISSSRTNESGLEELTR---EIMMMQALSHPNVVRYLGFEVHTADAKLLIFQEWVPGNSLSSRLATYGKFSDAMTRRYVRQLLTGLAYLHDHGVMHNDLKCENLLLDKGGVVKLADFGTAARISDTGAQQGGRL---GTPYFMAPEIIINREYTPKADMWSVGGAVLQMTTLAAPWQGMGFRTPVQLRRHMAATRAPPPIAPCVAPPLRALMLRCFARAPAERPDARTLLADPFL 1119
            W  G+ IG+G+ GRVY  +  DSG   AVKE+A S    NE  LEEL +   EI ++++L HPN+V YLG ++   +  L IF EWVPG S+ + +  +G+ S+A+ R+YV QLL GL YLH+  V+H D+K  N+L+D  G +KLADFG++ R+   G    G L   GTPYFMAPE+I+   +  KAD+WSVG  +LQM T   PW+ +   TP  L  H+A  ++PPP+   ++  L  L+L  F+R    RP A  LL  PF+
Sbjct:   54 WRRGDLIGTGANGRVYLGLEEDSGAIIAVKEMAFS----NEQELEELAQMQEEIELLRSLQHPNIVTYLGTDICDENKLLYIFTEWVPGGSIQALITKFGRLSEAIVRKYVAQLLVGLKYLHEQQVIHRDIKAANILVDDRGTIKLADFGSSKRLDSMGMINNGNLSLRGTPYFMAPEVIMQIGHGRKADIWSVGCTILQMVTGQPPWKNLRLGTPAALMFHIANAQSPPPMPSMLSIELNNLLLATFSRDTNRRPAANDLLRYPFV 316
[Close]
BLAST of jgi.p|Trimin1|178057 vs. uniprot
Match: A0A7S4J1D0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J1D0_9STRA)

HSP 1 Score: 226 bits (576), Expect = 3.910e-63
Identity = 134/303 (44.22%), Postives = 172/303 (56.77%), Query Frame = 1 
Query:  307 SSADRVRPDHWMVGENIGSGSFGRVYKAMNADSGVEFAVKEV---AISSSRTNESGLEELTREIMMMQALSHPNVVRYLGFEVHTADAKLLIFQEWVPGNSLSSRLATYGKFSDAMTRRYVRQLLTGLAYLHDHGVMHNDLKCENLLLDKGGVVKLADFGTAARIS----DTGAQQGG---------------RLGTPYFMAPEIIINREYTPKADMWSVGGAVLQMTTLAAPWQGMGFRTPVQLRRHMAATRAPPPI---------APCVAPPLRALMLRCFARAPAERPDARTLLADPFLS 1122
            +SA RVR   W +G  IG+GSFG V+  MN  +G   AVK +      S  ++ +   +L REI +M  L HPN+V YLG E+    + L IFQEWVPG S+SS L  +G FS A+ R Y+RQ+L GL YLH  GV+H D+K  N+L+   GVVKLADFG + R+     D G  +G                  GTPYFMAPE+   R Y PKAD+WSVGG   QM T  APW+GMGF  P+ L  ++     PPP+         A      +RAL+  CF R P++RP AR LL DPF +
Sbjct:  396 TSAQRVRRGKWTLGNQIGAGSFGVVHVGMNTLTGKLMAVKSIHHHPAPSPGSSPALTTDLQREIDLMSELRHPNIVLYLGSEIDATRSVLHIFQEWVPGGSVSSMLRKFGPFSVAVVRSYLRQILGGLDYLHSRGVLHRDIKGGNILVSDEGVVKLADFGASRRMRSFERDEGVLEGEGNKRDHEEDMMESLTMRGTPYFMAPEVFEER-YGPKADVWSVGGVAYQMVTGEAPWRGMGFSNPMSLFLYLRGHDDPPPLNLPSAGTSKAAQQLEKMRALIWTCFRREPSKRPSARLLLQDPFFN 697
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|178057 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z5Y7_9STRA5.610e-233100.00Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835Z4I6_9STRA3.370e-12868.94Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835YLD7_9STRA1.640e-7448.33Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835YLS7_9STRA1.870e-7248.34Kinase-like domain-containing protein (Fragment) n... [more]
F0XXV1_AURAN9.640e-7145.07Protein kinase domain-containing protein (Fragment... [more]
A0A7S3UV54_HETAK4.210e-7045.26Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D7G097_ECTSI7.740e-7045.93Protein kinase domain-containing protein n=1 Tax=E... [more]
F0YL51_AURAN2.270e-6640.75Protein kinase domain-containing protein n=1 Tax=A... [more]
A0A8J2WWQ2_9STRA1.030e-6344.19Hypothetical protein n=4 Tax=Pelagomonas calceolat... [more]
A0A7S4J1D0_9STRA3.910e-6344.22Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_164contigContig_164:236587..238290 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|178057|e_gw1.164.6.1
GOsGO:0001101,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005794,GO:0005802,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006950,GO:0006952,GO:0007034,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009719,GO:0009725,GO:0009737,GO:0009738,GO:0009755,GO:0009787,GO:0009788,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010646,GO:0010648,GO:0012505,GO:0016192,GO:0016197,GO:0016301,GO:0016310,GO:0016567,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0019787,GO:0023051,GO:0023052,GO:0023057,GO:0031410,GO:0031982,GO:0031984,GO:0032446,GO:0032502,GO:0032870,GO:0032940,GO:0033993,GO:0036211,GO:0040007,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043621,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0045324,GO:0046903,GO:0046907,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048589,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0065007,GO:0070647,GO:0070887,GO:0071215,GO:0071229,GO:0071310,GO:0071396,GO:0071495,GO:0071704,GO:0097305,GO:0097306,GO:0097708,GO:0098791,GO:0140096,GO:1901419,GO:1901420,GO:1901564,GO:1901700,GO:1901701,GO:1905957,GO:1905958
DescriptionMAP kinase kinase kinase activity
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0198@1|root,KOG0198@2759|Eukaryota
Evalue1.27e-70
Seed ortholog2880.D7G097
Hectar predicted targeting categoryother localisation
TranscriptId178379
TrackFilteredModels1
ProteinId178057
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|178057gene_16502Tribonema minus UTEX_B_3156 geneContig_164 236587..238290 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|178057Trimin1|178057|e_gw1.164.6.1Tribonema minus UTEX_B_3156 polypeptideContig_164 236587..238290 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_16502_3exon_16502_3Tribonema minus UTEX_B_3156 exonContig_164 236587..236970 -
exon_16502_2exon_16502_2Tribonema minus UTEX_B_3156 exonContig_164 237205..237399 -
exon_16502_1exon_16502_1Tribonema minus UTEX_B_3156 exonContig_164 237748..238290 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_16502CDS_16502Tribonema minus UTEX_B_3156 CDSContig_164 237748..238290 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_16502 ID=mRNA_16502|Name=jgi.p|Trimin1|178057|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1122bp|location=Sequence derived from alignment at Contig_164:236587..238290- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTGGCTGAGTCCTCGACAGTTGGATGGCGTAGAGCTGGAGCCGCTCTC
GGTTGCAGTGGTGCAGTCGCCTCGCTTCACAGCCCAACCTGCCAAGTTCT
TGTGGCACCACAGCAGCGTCAGCAGCGATGGCGGCCTCACGAGCAGCACA
GCTACAAGCAGTGCGACGCTCAGCCCCTGTGCGTCGCCACCGAGCAGCTG
CGACAGCAGAAGCAGGGACGACCAGCAGCAACACAGACGAGTGAGAAAGC
GGCAGCAGGAGCGAGGGGCGTCGTCATCACCATCCACATCGCCGATTGAC
AGCAGCAGCAGTGCCGACAGAGTGCGGCCCGACCATTGGATGGTTGGCGA
GAACATAGGGTCGGGATCGTTTGGCCGGGTCTACAAGGCGATGAATGCAG
ACAGTGGCGTCGAGTTTGCCGTGAAGGAGGTGGCCATCAGCTCTTCACGC
ACCAATGAGTCCGGCTTGGAGGAGCTCACGAGGGAGATCATGATGATGCA
GGCGCTCTCCCACCCGAATGTGGTGCGATACCTGGGCTTTGAGGTCCACA
CCGCGGACGCCAAGCTCCTCATCTTCCAGGAGTGGGTGCCGGGCAACTCG
CTGAGCAGCCGCCTCGCGACGTATGGCAAGTTCAGCGACGCCATGACGCG
CCGCTACGTGCGACAGCTGCTCACGGGCCTCGCCTACCTCCACGACCACG
GCGTCATGCACAACGACCTCAAGTGTGAAAATCTACTGCTCGACAAGGGC
GGCGTCGTAAAGCTCGCTGACTTCGGCACGGCCGCCAGGATCAGCGACAC
GGGCGCGCAGCAGGGGGGGCGCTTAGGAACACCGTACTTCATGGCGCCGG
AAATAATCATCAATCGCGAGTACACGCCGAAAGCCGATATGTGGTCCGTC
GGCGGCGCCGTGCTGCAGATGACGACGCTCGCCGCGCCGTGGCAGGGCAT
GGGCTTCCGCACGCCCGTGCAGCTGCGGCGGCACATGGCGGCGACGCGCG
CGCCGCCGCCCATCGCGCCGTGCGTCGCGCCGCCGCTGCGCGCGCTCATG
CTGCGCTGCTTCGCGCGCGCGCCGGCGGAGCGCCCGGATGCGCGCACGCT
GCTCGCCGACCCCTTCCTGAGC
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protein sequence of jgi.p|Trimin1|178057

>Trimin1|178057|e_gw1.164.6.1 ID=Trimin1|178057|e_gw1.164.6.1|Name=jgi.p|Trimin1|178057|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=374bp
MWLSPRQLDGVELEPLSVAVVQSPRFTAQPAKFLWHHSSVSSDGGLTSST
ATSSATLSPCASPPSSCDSRSRDDQQQHRRVRKRQQERGASSSPSTSPID
SSSSADRVRPDHWMVGENIGSGSFGRVYKAMNADSGVEFAVKEVAISSSR
TNESGLEELTREIMMMQALSHPNVVRYLGFEVHTADAKLLIFQEWVPGNS
LSSRLATYGKFSDAMTRRYVRQLLTGLAYLHDHGVMHNDLKCENLLLDKG
GVVKLADFGTAARISDTGAQQGGRLGTPYFMAPEIIINREYTPKADMWSV
GGAVLQMTTLAAPWQGMGFRTPVQLRRHMAATRAPPPIAPCVAPPLRALM
LRCFARAPAERPDARTLLADPFLS
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mRNA from alignment at Contig_164:236587..238290-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_16502 ID=mRNA_16502|Name=jgi.p|Trimin1|178057|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1704bp|location=Sequence derived from alignment at Contig_164:236587..238290- (Tribonema minus UTEX_B_3156 )
ATGTGGCTGAGTCCTCGACAGTTGGATGGCGTAGAGCTGGAGCCGCTCTC
GGTTGCAGTGGTGCAGTCGCCTCGCTTCACAGCCCAACCTGCCAAGTTCT
TGTGGCACCACAGCAGCGTCAGCAGCGATGGCGGCCTCACGAGCAGCACA
GCTACAAGCAGTGCGACGCTCAGCCCCTGTGCGTCGCCACCGAGCAGCTG
CGACAGCAGAAGCAGGGACGACCAGCAGCAACACAGACGAGTGAGAAAGC
GGCAGCAGGAGCGAGGGGCGTCGTCATCACCATCCACATCGCCGATTGAC
AGCAGCAGCAGTGCCGACAGAGTGCGGCCCGACCATTGGATGGTTGGCGA
GAACATAGGGTCGGGATCGTTTGGCCGGGTCTACAAGGCGATGAATGCAG
ACAGTGGCGTCGAGTTTGCCGTGAAGGAGGTGGCCATCAGCTCTTCACGC
ACCAATGAGTCCGGCTTGGAGGAGCTCACGAGGGAGATCATGATGATGCA
GGCGCTCTCCCACCCGAATGTGGTGCGATACCTGGGCTTTGAGGTACGCA
GACTGCAGAGAGACGACGCTGCTGCATGTCCAGTATGTACTGCCATGCTG
CCGCTGCTACCATGCCAGCTGTATACAGTACAGACACCAGCAGGAGGCAA
CATGCAGCGGATGACACCTGTGAGGGCTGAAGCTGAACTGCAGCGGCGCC
TGCCTGCACTGCTCTCATGCTCATGACTCATACTCATGACTCTGTGACTC
ACTCCCCCTGCGCCCAGGTCCACACCGCAGACGCCAAGCTCCCCATCTTC
CAGGAGTGGGTGCCGGCCAACTCACTGAGCAGCCGCCTCACTCATGACTC
ATACTCATGACTCGTACTCATGACTCTGTGACTCCTTCCAGGTCCACACC
GCGGACGCCAAGCTCCTCATCTTCCAGGAGTGGGTGCCGGGCAACTCGCT
GAGCAGCCGCCTCGCGACGTATGGCAAGTTCAGCGACGCCATGACGCGCC
GCTACGTGCGACAGCTGCTCACGGGCCTCGCCTACCTCCACGACCACGGC
GTCATGCACAACGACCTCAAGTGTGAAAATCTACTGGTGAGTGCGCTGGA
GTGGCGGCGGCGTGCAATGCGAGCAGGTTGCCAAGGTTCGTTCGCGCGTT
GCGTTCGTCCTCGCCTGGTGTCGCCCCGCGCGACAGGCGCGCATTCGCCG
CGCCCAAGCTGCAGCGCAGCGCAACTGCAACAACACACACACTAGCACAC
ACGTACTTCAAGTATGGGAACGGCACCTTCACGCATCCTCCTCCGTATTC
CCCCCCCCCTGCCCCTGCAGCTCGACAAGGGCGGCGTCGTAAAGCTCGCT
GACTTCGGCACGGCCGCCAGGATCAGCGACACGGGCGCGCAGCAGGGGGG
GCGCTTAGGAACACCGTACTTCATGGCGCCGGAAATAATCATCAATCGCG
AGTACACGCCGAAAGCCGATATGTGGTCCGTCGGCGGCGCCGTGCTGCAG
ATGACGACGCTCGCCGCGCCGTGGCAGGGCATGGGCTTCCGCACGCCCGT
GCAGCTGCGGCGGCACATGGCGGCGACGCGCGCGCCGCCGCCCATCGCGC
CGTGCGTCGCGCCGCCGCTGCGCGCGCTCATGCTGCGCTGCTTCGCGCGC
GCGCCGGCGGAGCGCCCGGATGCGCGCACGCTGCTCGCCGACCCCTTCCT
GAGC
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Coding sequence (CDS) from alignment at Contig_164:236587..238290-

>mRNA_16502 ID=mRNA_16502|Name=jgi.p|Trimin1|178057|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1122bp|location=Sequence derived from alignment at Contig_164:236587..238290- (Tribonema minus UTEX_B_3156 )
ATGTGGCTGAGTCCTCGACAGTTGGATGGCGTAGAGCTGGAGCCGCTCTC
GGTTGCAGTGGTGCAGTCGCCTCGCTTCACAGCCCAACCTGCCAAGTTCT
TGTGGCACCACAGCAGCGTCAGCAGCGATGGCGGCCTCACGAGCAGCACA
GCTACAAGCAGTGCGACGCTCAGCCCCTGTGCGTCGCCACCGAGCAGCTG
CGACAGCAGAAGCAGGGACGACCAGCAGCAACACAGACGAGTGAGAAAGC
GGCAGCAGGAGCGAGGGGCGTCGTCATCACCATCCACATCGCCGATTGAC
AGCAGCAGCAGTGCCGACAGAGTGCGGCCCGACCATTGGATGGTTGGCGA
GAACATAGGGTCGGGATCGTTTGGCCGGGTCTACAAGGCGATGAATGCAG
ACAGTGGCGTCGAGTTTGCCGTGAAGGAGGTGGCCATCAGCTCTTCACGC
ACCAATGAGTCCGGCTTGGAGGAGCTCACGAGGGAGATCATGATGATGCA
GGCGCTCTCCCACCCGAATGTGGTGCGATACCTGGGCTTTGAGGTCCACA
CCGCGGACGCCAAGCTCCTCATCTTCCAGGAGTGGGTGCCGGGCAACTCG
CTGAGCAGCCGCCTCGCGACGTATGGCAAGTTCAGCGACGCCATGACGCG
CCGCTACGTGCGACAGCTGCTCACGGGCCTCGCCTACCTCCACGACCACG
GCGTCATGCACAACGACCTCAAGTGTGAAAATCTACTGCTCGACAAGGGC
GGCGTCGTAAAGCTCGCTGACTTCGGCACGGCCGCCAGGATCAGCGACAC
GGGCGCGCAGCAGGGGGGGCGCTTAGGAACACCGTACTTCATGGCGCCGG
AAATAATCATCAATCGCGAGTACACGCCGAAAGCCGATATGTGGTCCGTC
GGCGGCGCCGTGCTGCAGATGACGACGCTCGCCGCGCCGTGGCAGGGCAT
GGGCTTCCGCACGCCCGTGCAGCTGCGGCGGCACATGGCGGCGACGCGCG
CGCCGCCGCCCATCGCGCCGTGCGTCGCGCCGCCGCTGCGCGCGCTCATG
CTGCGCTGCTTCGCGCGCGCGCCGGCGGAGCGCCCGGATGCGCGCACGCT
GCTCGCCGACCCCTTCCTGAGC
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