mRNA_16462 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|177974
Unique NamemRNA_16462
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|177974 vs. uniprot
Match: A0A835ZG45_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG45_9STRA)

HSP 1 Score: 513 bits (1320), Expect = 3.920e-184
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 1
Query:    1 MRLLLQLLVLAALQQTATAVCPNFCSGHGTCGPENTCACNDGWTAAVDCSLRNCPLGAAWADKAYATDKAHADVECSGAGICDGETGECQCFTPYVGSACQRLRCPNDCSSHGVCMTMADVVRYYGALGSTYDNWDKDSTTMCVCDAGYFGSDCTKRMCPKGDDPLTIGQASRQIEIEISSTATLVGGTFDFMFNGQLVTIATNAGDDACEAVSASAAYCHCACMMLVSSFFLYYSHALNGTNL 732
            MRLLLQLLVLAALQQTATAVCPNFCSGHGTCGPENTCACNDGWTAAVDCSLRNCPLGAAWADKAYATDKAHADVECSGAGICDGETGECQCFTPYVGSACQRLRCPNDCSSHGVCMTMADVVRYYGALGSTYDNWDKDSTTMCVCDAGYFGSDCTKRMCPKGDDPLTIGQASRQIEIEISSTATLVGGTFDFMFNGQLVTIATNAGDDACEAVSASAAYCHCACMMLVSSFFLYYSHALNGTNL
Sbjct:    1 MRLLLQLLVLAALQQTATAVCPNFCSGHGTCGPENTCACNDGWTAAVDCSLRNCPLGAAWADKAYATDKAHADVECSGAGICDGETGECQCFTPYVGSACQRLRCPNDCSSHGVCMTMADVVRYYGALGSTYDNWDKDSTTMCVCDAGYFGSDCTKRMCPKGDDPLTIGQASRQIEIEISSTATLVGGTFDFMFNGQLVTIATNAGDDACEAVSASAAYCHCACMMLVSSFFLYYSHALNGTNL 244          
BLAST of jgi.p|Trimin1|177974 vs. uniprot
Match: D8LFY3_ECTSI (EGF-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFY3_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 1.950e-76
Identity = 114/213 (53.52%), Postives = 138/213 (64.79%), Query Frame = 1
Query:   49 ATAVCPNFCSGHGTCGPENTCACNDGWTAAVDCSLRNCPLGAAWADKAYATDKAHADVECSGAGICDGETGECQCFTPYVGSACQRLRCPNDCSSHGVCMTMADVVRYYG-----------ALGSTYDNWDKDSTTMCVCDAGYFGSDCTKRMCPKGDDPLTIGQASRQIEIEISST-ATLVGGTFDFMFNGQLVTIATN-----AGDDACEA 636
            A A CPN CSGHGTCGP   C CN GW  A DCSLR C  G AWADKAYATD AH++VECS AGICD +TG C CF+P+ G+ACQR RCP DCS HG CMT+AD+ R+YG            +G +Y NWD  STT C CD G+FG+DC+ RMCPK DDP+T+ Q  R I I + +  +  + G+  F FNG    ++T+       D  CEA
Sbjct:   24 ANAACPNHCSGHGTCGPGAKCTCNSGWDFAPDCSLRTCSKGVAWADKAYATDIAHSEVECSNAGICDRDTGICSCFSPFTGAACQRARCPGDCSGHGTCMTIADMSRFYGPDYTQPGTGGDGIGPSYGNWDAQSTTACYCDQGHFGADCSNRMCPKADDPVTVNQDDRSIFISVGTDHSDSMNGSLAFTFNGHSTRLSTSIFTSTVADSLCEA 236          
BLAST of jgi.p|Trimin1|177974 vs. uniprot
Match: A0A7S2WIH4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WIH4_9STRA)

HSP 1 Score: 222 bits (566), Expect = 1.230e-67
Identity = 100/190 (52.63%), Postives = 117/190 (61.58%), Query Frame = 1
Query:   55 AVCPNFCSGHGTCGPENTCACNDGWTAAVDCSLRNCPLGAAWADKAYATDKAHADVECSGAGICDGETGECQCFTPYVGSACQRLRCPNDCSSHGVCMTMADVVRYYG------------ALGSTYDNWDKDSTTMCVCDAGYFGSDCTKRMCPKGDDPLTIGQASRQIEIEISSTATLVGGTFDFMFNG 588
            A CPN CSGHG CG EN C C+DGW    DCS R CP   AWAD+AY+ D AH   ECSGAG+CD   G C CF  Y G+ACQR RCPNDCS HG+C+T+  + R  G             +G  Y NWD D  TMC CD G+FG DC+ RMCPKGDDPLT+ Q  R I + ++   T +GG F   F G
Sbjct:   47 ASCPNQCSGHGACGNENVCTCDDGWVVMPDCSERQCPYDRAWADRAYSDDAAHTLAECSGAGLCDRAQGTCTCFDGYTGAACQRARCPNDCSGHGLCITLGALGRLEGNDYSARPGVGGDGIGPEYTNWDADHVTMCNCDWGFFGPDCSLRMCPKGDDPLTVDQGYRAISVRLTGDGTGLGGRFRISFLG 236          
BLAST of jgi.p|Trimin1|177974 vs. uniprot
Match: A0A8K1CGE0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGE0_PYTOL)

HSP 1 Score: 234 bits (597), Expect = 5.830e-67
Identity = 112/223 (50.22%), Postives = 137/223 (61.43%), Query Frame = 1
Query:   19 LLVLAALQQTATAVCPNFCSGHGTCGPENTCACNDGWTAAVDCSLRNCPLGAAWADKAYATDKAHADVECSGAGICDGETGECQCFTPYVGSACQRLRCPNDCSSHGVCMTMADVVRYYG----------ALGSTYDNWDKDSTTMCVCDAGYFGSDCTKRMCPKGDDPLTIGQASRQIEIEISSTATLVGGTFDFMFNGQLVTIATNAGDDACEAVSASAAY 657
            LL+L    +  +A CPNFCSGHGTCG  N C C+  W+AA DCSLR CP G AW+DKA  T+KAHA  ECS  G+CD   GEC CF  Y G+ACQRLRCPNDCS HG+C ++A + R YG           +G  Y NW+KDS + C CD GY G DC++RMCPK DDPLT  Q  R I+I    T   + G+    FNG+   +  NA   A    S +AA+
Sbjct:    3 LLLLTMATRRVSATCPNFCSGHGTCGASNQCTCDTAWSAAPDCSLRKCPSGVAWSDKASTTNKAHATAECSNRGMCDYTKGECMCFNGYTGAACQRLRCPNDCSGHGLCYSLATLAREYGPDSLPGVGGDGVGPNYQNWEKDSMSTCFCDTGYNGPDCSQRMCPKNDDPLTTLQGYRTIKITTGGTTDPLVGSIRVKFNGEAAVL--NADGSANTDASCTAAF 223          
BLAST of jgi.p|Trimin1|177974 vs. uniprot
Match: A0A0A7CM32_9STRA (Secreted protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A0A7CM32_9STRA)

HSP 1 Score: 209 bits (533), Expect = 2.690e-64
Identity = 99/201 (49.25%), Postives = 124/201 (61.69%), Query Frame = 1
Query:   25 VLAALQQTATAVCPNFCSGHGTCGPENTCACNDGWTAAVDCSLRNCPLGAAWADKAYATDKAHADVECSGAGICDGETGECQCFTPYVGSACQRLRCPNDCSSHGVCMTMADVVRYYG-----ALGSTYDNWDKDSTTMCVCDAGYFGSDCTKRMCPKGDDPLTIGQASRQIEIEISSTATLVGGTFDFMFNGQLVTIATN 612
            +LA++     A C NFCSGHGTCG  N C C  GWT A DCS + CP G AWADKA  T+ AH+ +ECS  G+CD  TG C C T + G+ACQR  C N+CS HG C TMA +   YG       G  Y NW++ S   C CD GY G DC+ RMCPK DDPLT GQ  R + + ++++ T + G+  F F+GQ VT+  N
Sbjct:    9 LLASIWTGVDATCANFCSGHGTCGGANKCTCFPGWTGAPDCSRKVCPTGTAWADKASGTNVAHSAMECSNRGVCDYSTGVCMCTTGFTGNACQRRVCLNNCSGHGTCQTMAMMGLMYGPDVGTGKGPAYTNWEQSSMMSCFCDYGYQGPDCSLRMCPKNDDPLTTGQGYRTVSLTLAAS-TALAGSVTFTFSGQSVTMPAN 208          
BLAST of jgi.p|Trimin1|177974 vs. uniprot
Match: A0A0P1AWZ5_PLAHL (Teneurin-1 and related extracellular matrix proteins, contain EGF-like repeats (Fragment) n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWZ5_PLAHL)

HSP 1 Score: 208 bits (529), Expect = 7.340e-63
Identity = 92/180 (51.11%), Postives = 114/180 (63.33%), Query Frame = 1
Query:   43 QTATAVCPNFCSGHGTCGPENTCACNDGWTAAVDCSLRNCPLGAAWADKAYATDKAHADVECSGAGICDGETGECQCFTPYVGSACQRLRCPNDCSSHGVCMTMADVVRYYG----------ALGSTYDNWDKDSTTMCVCDAGYFGSDCTKRMCPKGDDPLTIGQASRQIEIEISSTAT 552
            Q A A C N CSGHG CG  N C C+  W  A DCS+R CP+G AW DKA  T+ AHA  ECS  G+CD   GEC CF  Y G+ACQRLRCP++CS HG+C + A +   YG           +G  Y NW+KDS + C+CD GY G DC++ MC K DDPLT GQ  RQI+I++ + A+
Sbjct:   21 QIANAACANSCSGHGRCGSSNQCICDADWALAPDCSMRRCPVGVAWTDKARTTNLAHAHAECSNRGVCDYSRGECTCFDGYSGAACQRLRCPSNCSGHGMCYSSAILALRYGPDSLPNVAGDGVGPVYSNWEKDSVSSCMCDMGYTGPDCSQLMCAKNDDPLTTGQVHRQIQIQVGADAS 200          
BLAST of jgi.p|Trimin1|177974 vs. uniprot
Match: D7G350_ECTSI (EGF-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G350_ECTSI)

HSP 1 Score: 209 bits (532), Expect = 4.020e-62
Identity = 94/203 (46.31%), Postives = 119/203 (58.62%), Query Frame = 1
Query:   25 VLAALQQTATAVCPNFCSGHGTCGPENTCACNDGWTAAVDCSLRNCPLGAAWADKAYATDKAHADVECSGAGICDGETGECQCFTPYVGSACQRLRCPNDCSSHGVCMTMADVVRYYGA-----LGS-TYDNWDKDSTTMCVCDAGYFGSDCTKRMCPKGDDPLTIGQASRQIEIEISSTATLVGGTFDFMFNGQLVTIATNA 615
            VL+ +     AVCPN C+GHG CG EN C C  GW    DCSL+ CP G +W  KAY  + AH  +ECS  G+CD  TG C C + Y GSACQRL CPNDCS  G C T+     +YG      +GS  Y NW+ D    C+CD GY G DC+ RMCPKGDDP+T  Q S ++ + +++T  ++ G F   F G+      NA
Sbjct:   25 VLSYMDGEVLAVCPNMCNGHGECGLENVCECETGWDLVADCSLKECPTGVSWGSKAYEENTAHVVMECSNVGVCDRVTGSCSCPSGYTGSACQRLACPNDCSGRGTCATLGQAAEFYGVTRYGGVGSFVYTNWEADMVMTCICDWGYTGGDCSLRMCPKGDDPVTTLQESPRVAMTVNATDGVMEGNFVLTFQGESFAFPANA 227          
BLAST of jgi.p|Trimin1|177974 vs. uniprot
Match: A0A6G0KY74_9STRA (EGF-like domain-containing protein (Fragment) n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0KY74_9STRA)

HSP 1 Score: 218 bits (555), Expect = 7.120e-62
Identity = 106/221 (47.96%), Postives = 130/221 (58.82%), Query Frame = 1
Query:   19 LLVLAALQQTATAVCPNFCSGHGTCGPENTCACNDGWTAAVDCSLRNCPLGAAWADKAYATDKAHADVECSGAGICDGETGECQCFTPYVGSACQRLRCPNDCSSHGVCMTMADVVRYYG-----ALGSTYDNWDKDSTTMCVCDAGYFGSDCTKRMCPKGDDPLTIGQASRQIEIEISST---ATLVGGTFDFMFNGQLVTIATNAGDDACEAVSASAAY 657
            LL+   + Q A A C N CSGHG CG  N C C+  W  A DCSLR CP G AW DKA   + AHA  ECS  G+CD   GEC CF  Y G+ACQRLRCP+DCS HG+C + A +   YG       G TY NW+KDS T C+CD GY G DC++ MC K DDPLT GQA R I+I + +    AT + G+    F G +   +  AG DA    + + A+
Sbjct:   12 LLLPVVVVQVADAACANSCSGHGRCGASNQCTCDADWALAPDCSLRKCPTGVAWTDKAKTANAAHAVAECSNRGVCDYSKGECTCFNGYTGAACQRLRCPSDCSGHGLCYSSATLASQYGPSSLAGSGPTYTNWEKDSMTSCMCDMGYNGPDCSQFMCAKNDDPLTTGQAYRTIQIAVGADPTPATALAGSVRVHFLGDVAVFSAVAGADAAHETACAQAF 232          
BLAST of jgi.p|Trimin1|177974 vs. uniprot
Match: A0A836CFV3_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV3_9STRA)

HSP 1 Score: 206 bits (524), Expect = 2.120e-61
Identity = 102/224 (45.54%), Postives = 133/224 (59.38%), Query Frame = 1
Query:    7 LLLQLLVLAALQQTATAVCPNFCSGHGTCGPENTCACNDGWTAAVDCSLRNCPLGAAWADKAY-ATDK--AHADVECSGAGICDGETGECQCFTPYVGSACQRLRCPNDCSSHGVCMTMADVVRYYGALGST---------------YDNWDKDSTTMCVCDAGYFGSDCTKRMCPKGDDPLTIGQASRQIEIEISS-TATLVGGTFD--FMFNGQLVTIATNA 615
            ++++LL+L A    + A CPNFCSGHG CG  N C C+  W  A DCSLR+CP G +WA   Y A++K  AH   ECS  G C+ +TG C C  P+ GSACQRL+CPNDCS HG C T+     +Y   G +               YDNWD DS+T C+CD G+ G+DC+ +MCPKGDDP+T  Q      ++I S T+T   G  D  F F G+ VT+ + A
Sbjct:    1 MIVRLLLLLATCGISWAACPNFCSGHGDCGKHNVCKCDADWNVAPDCSLRSCPSGTSWASNTYMASNKVVAHTAFECSNVGTCNRKTGTCTCPAPFTGSACQRLQCPNDCSEHGFCATLRQASEFYTYAGGSDPDFAGTGPGSALYIYDNWDADSSTTCICDWGFTGADCSMKMCPKGDDPVTTAQDPPTFTVDIQSRTSTTSSGIMDLVFYFGGESVTLDSRA 224          
BLAST of jgi.p|Trimin1|177974 vs. uniprot
Match: A0A6A3LPM3_9STRA (Uncharacterized protein n=10 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3LPM3_9STRA)

HSP 1 Score: 218 bits (555), Expect = 2.450e-61
Identity = 106/221 (47.96%), Postives = 130/221 (58.82%), Query Frame = 1
Query:   19 LLVLAALQQTATAVCPNFCSGHGTCGPENTCACNDGWTAAVDCSLRNCPLGAAWADKAYATDKAHADVECSGAGICDGETGECQCFTPYVGSACQRLRCPNDCSSHGVCMTMADVVRYYG-----ALGSTYDNWDKDSTTMCVCDAGYFGSDCTKRMCPKGDDPLTIGQASRQIEIEISST---ATLVGGTFDFMFNGQLVTIATNAGDDACEAVSASAAY 657
            LL+   + Q A A C N CSGHG CG  N C C+  W  A DCSLR CP G AW DKA   + AHA  ECS  G+CD   GEC CF  Y G+ACQRLRCP+DCS HG+C + A +   YG       G TY NW+KDS T C+CD GY G DC++ MC K DDPLT GQA R I+I + +    AT + G+    F G +   +  AG DA    + + A+
Sbjct:   12 LLLPVVVVQVADAACANSCSGHGRCGASNQCTCDADWALAPDCSLRKCPTGVAWTDKAKTANAAHAVAECSNRGVCDYSKGECTCFNGYTGAACQRLRCPSDCSGHGLCYSSATLASQYGPSSLAGSGPTYTNWEKDSMTSCMCDMGYNGPDCSQFMCAKNDDPLTTGQAYRTIQIAVGADPTPATALAGSVRVHFLGDVAVFSAVAGADAAHETACAQAF 232          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|177974 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZG45_9STRA3.920e-184100.00EGF-like domain-containing protein n=1 Tax=Tribone... [more]
D8LFY3_ECTSI1.950e-7653.52EGF-like domain-containing protein n=1 Tax=Ectocar... [more]
A0A7S2WIH4_9STRA1.230e-6752.63Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A8K1CGE0_PYTOL5.830e-6750.22Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0A7CM32_9STRA2.690e-6449.25Secreted protein n=1 Tax=Thraustotheca clavata Tax... [more]
A0A0P1AWZ5_PLAHL7.340e-6351.11Teneurin-1 and related extracellular matrix protei... [more]
D7G350_ECTSI4.020e-6246.31EGF-like domain-containing protein n=1 Tax=Ectocar... [more]
A0A6G0KY74_9STRA7.120e-6247.96EGF-like domain-containing protein (Fragment) n=1 ... [more]
A0A836CFV3_9STRA2.120e-6145.54EGF-like domain-containing protein n=1 Tax=Tribone... [more]
A0A6A3LPM3_9STRA2.450e-6147.96Uncharacterized protein n=10 Tax=Phytophthora frag... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_162contigContig_162:140631..144454 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|177974|e_gw1.162.10.1
Descriptionregulation of canonical Wnt signaling pathway involved in osteoblast differentiation
COG categoryL
Max annot lvl2759|Eukaryota
EggNOG OGsKOG1225@1|root,KOG1225@2759|Eukaryota
Evalue3.2e-77
Seed ortholog2880.D8LFY3
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionSecreted EGF-like domain protein
Ec32 orthologEc-05_005030.1
TranscriptId178296
TrackFilteredModels1
ProteinId177974
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|177974gene_16462Tribonema minus UTEX_B_3156 geneContig_162 140631..144454 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|177974Trimin1|177974|e_gw1.162.10.1Tribonema minus UTEX_B_3156 polypeptideContig_162 140631..144454 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_16462_3exon_16462_3Tribonema minus UTEX_B_3156 exonContig_162 140631..140882 -
exon_16462_2exon_16462_2Tribonema minus UTEX_B_3156 exonContig_162 141831..141897 -
exon_16462_1exon_16462_1Tribonema minus UTEX_B_3156 exonContig_162 144039..144454 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_16462CDS_16462Tribonema minus UTEX_B_3156 CDSContig_162 144039..144454 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_16462 ID=mRNA_16462|Name=jgi.p|Trimin1|177974|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=735bp|location=Sequence derived from alignment at Contig_162:140631..144454- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCGGTTGCTGCTGCAGCTGCTGGTACTGGCAGCATTGCAACAGACAGC
CACAGCAGTGTGCCCCAATTTCTGCAGCGGGCACGGCACCTGTGGGCCAG
AGAACACCTGCGCTTGCAATGACGGCTGGACAGCAGCAGTGGATTGCAGC
CTCAGGAACTGCCCGCTGGGAGCAGCGTGGGCGGACAAAGCGTATGCAAC
GGACAAGGCGCACGCGGACGTGGAGTGCTCGGGGGCGGGGATCTGCGATG
GGGAGACTGGAGAGTGCCAGTGCTTCACCCCGTACGTGGGCTCAGCTTGC
CAGAGGCTTCGGTGTCCCAACGACTGTTCCTCTCATGGGGTATGCATGAC
GATGGCAGATGTGGTGCGATACTATGGCGCGCTGGGGAGCACGTACGACA
ATTGGGACAAAGACAGCACCACTATGTGCGTGTGCGATGCGGGCTACTTT
GGGTCGGATTGCACTAAGCGCATGTGTCCAAAGGGGGATGATCCGCTCAC
CATCGGCCAGGCGTCCCGTCAAATTGAAATTGAGATCAGCTCAACTGCGA
CATTGGTGGGGGGGACCTTTGATTTCATGTTCAACGGGCAGCTGGTCACT
ATTGCCACAAATGCAGGCGATGACGCATGCGAGGCGGTGAGTGCAAGTGC
TGCCTATTGTCATTGTGCTTGCATGATGCTCGTATCGTCATTTTTTTTAT
ATTACAGTCATGCTTTAAACGGGACCAACTTGTAG
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protein sequence of jgi.p|Trimin1|177974

>Trimin1|177974|e_gw1.162.10.1 ID=Trimin1|177974|e_gw1.162.10.1|Name=jgi.p|Trimin1|177974|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=245bp
MRLLLQLLVLAALQQTATAVCPNFCSGHGTCGPENTCACNDGWTAAVDCS
LRNCPLGAAWADKAYATDKAHADVECSGAGICDGETGECQCFTPYVGSAC
QRLRCPNDCSSHGVCMTMADVVRYYGALGSTYDNWDKDSTTMCVCDAGYF
GSDCTKRMCPKGDDPLTIGQASRQIEIEISSTATLVGGTFDFMFNGQLVT
IATNAGDDACEAVSASAAYCHCACMMLVSSFFLYYSHALNGTNL*
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mRNA from alignment at Contig_162:140631..144454-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_16462 ID=mRNA_16462|Name=jgi.p|Trimin1|177974|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3824bp|location=Sequence derived from alignment at Contig_162:140631..144454- (Tribonema minus UTEX_B_3156 )
ATGCGGTTGCTGCTGCAGCTGCTGGTACTGGCAGCATTGCAACAGACAGC CACAGCAGTGTGCCCCAATTTCTGCAGCGGGCACGGCACCTGTGGGCCAG AGAACACCTGCGCTTGCAATGACGGCTGGACAGCAGCAGTGGATTGCAGC CTCAGGAACTGCCCGCTGGGAGCAGCGTGGGCGGACAAAGCGTATGCAAC GGACAAGGCGCACGCGGACGTGGAGTGCTCGGGGGCGGGGATCTGCGATG GGGAGACTGGAGAGTGCCAGTGCTTCACCCCGTACGTGGGCTCAGCTTGC CAGAGGCTTCGGTGTCCCAACGACTGTTCCTCTCATGGGGTATGCATGAC GATGGCAGATGTGGTGCGATACTATGGCGCGCTGGGGAGCACGTACGACA ATTGGGACAAAGACAGGTGGGTCTCTATGCAGATTGTGCAACTCAACCTA ATGAAGGACTTTTTCAGCAGGCAGCAAGCAAGAGAACTCATGCACTAATT GTTACCAGATTCATTAGATCCAGCACTGCAATAACTTCTTTGTGCCTGTT GACAATTCATCACAAAAAGCTTCTGATGAAACTCAGTTGCATGTCTGCAA TGCATTGTGCAGCAGGCGAAGTGCACGATGAAGCGATTTACTTGAAGTGT GTGGTGAAGTCCCCAGTTCATACAGTGCTTGAAGAAGTCTGCGCCAGCTC CATGCACGCACTCAGGTGCTCAAGCATGCATGTGCAGCACTTATGTTGGC AGTCGTCCCGGCGATCTGCAGCACCAATGCAAGCCCATCGCAGCGTTATG CCATCTAACAATGCATGCCCTGTAGCCGTTTATGCCACCTCAAATAACTT ATGTGATGGGAACACTATTGGACAAAATTCAGGCTATGGGTTTGCGTTAC AGAAACAAACGCTCTGTGAATGGAGCTCTGTGCGGCAGACACTTCCTGAG ACATGGCAGTTGCTGAGCGACTGTCGCCGCAGTGTGCTCGCTGCAACCTC ATTCAACCAGCGATTGCATAGAGTCCTGGCATCCATAGCTGTTGAATGTC GTGCGGGGGCTGGGTGCCCATCTTCAGCACCAGTGACATTTCGAAGCGGA CGGACCAGCATTCGTCAACATGCGGTGATGCTCGCTCTTCAGACTTACAT TGACAAGGGCTGTTGAACAACGCAAAGCGCCTGTTGAATGACACAAAGCA GCAACGGCACAAGTGTAGATGGGCACTGTGGTAGTGCTTGCTGTCTCAGT CCTGTTTCAAGGTCCACAGCAATGATGTACTAATTGCGCAGTAGCGAAAG ACTCTGCTGCCAGTGCATGCTCATTGAGCGCATGCTCCAGGTGCGCAACG CTGTGAACATATGAAAAACGAATCAAAAGATCGTTGGACATATGTGAGTG CATGTTGATGCCGCTGATCTTACCAACGTTCGGGCTGTGATGATTCCCGG CATGCATCACCAGCAATGCGACTGAAAGTTTCAGAATTTTGTTTGTTTGA GCATGCTATCGTTGGAACAACATTGCTTGAGGCTTTACAGGTTGCAGGCT GCATGAGTCAGGTGTAGGATTTGATGAACATGGAGAAAAACGGTATCAGC ATTGCTGGTGAGCTTGGCATCAATCAGGTCAACCCTACCGTAAGCAAGGT TGGAGGTACCTCCAGGATCTCACTGATCTACTGCAAGTGACCCTGAATCA ATGAAATCGAGCCTACTTGGGGCCGCCGTGGTTTGCCTTGCCAGTTTCAT TCATTTGGTTTTCACGTAGCTGCTCCTGTGCAATCATCTGAACCGTTCTT GGAAGCAATTGACCCCGAACCGAGACGATGATTCATGAACCATCGCTGTG TGGCTTTGGCCGTGTGTCATGCTTACATCATATTGCAACACAAGTTGGCA ATACATACTATAGACATTATGTGAACATCATGGTTGACATCGCCGGATTT TATTGTTGCACACACTTGAGGTAGAATCGTACACCGATGGCGAAGCCCAC CACTGCTGAGCCGATTGCGGAGCCAAGCACCACTGAACCAACAGCTCAGC CTAACGCCAAGCTCACCACTGCTGAGCCCAAAATGAATTAGTTAGCACAG TGTTTATTCCTGTACTGTAGCTGGATGAATGAGGAAAGCTTGCAGGTTTG AGAAGCATGAACGGATGCAACAGCACACTTGTCATCTTGCGCACCTCTTT GAAGTGACTCATGGCGTTGCCAGAATTAAATAGTGATCCAACAATTGCAG CAGTGTACCTCCATAAGCCATACCTCAAAACACAGGATGAAAGCAGCACA TAAATGACCATCACCAGGCTGTGAGCAGGATGCTTTTCATTGTAGTTGAA GCACATCAAATGTCATAAAGAGCATCGTCTGCAGCACCTCACCATGTACA TATGTCTGCACGGAGAGGGCTTGATGATAAAGTGAAGCTAAGCAGGCAAC AGCGCGAGCATCTGAAATGAGCCAGTATAGCGGCTACTTTGTAGAAGTAT CTGGCTGCTCTCACCTGATTCAGTTCTGCATTCTTCTGCTGTCTGTGCCC TGTGCAGCACCACTATGTGCGTGTGCGATGCGGGCTACTTTGGGTCGGAT TGCACTAAGCGCATGTGTCCAAAGGTGAGCGTTGAAGAGCGGCACATGCT TATGTGCTCGTAAACTTTACCTTTCTTGTGATGGACAGTTTTGCACATGC AGGCAGATTCAATGCAGCGAATGAAGGAAGCTGGAGTAAGGTCATACTCT CGAGATCATTAAGCTATCAGGTTACTGAAGAGAGTCCAGCTGTTTGTGCA TGGAACAGCACTTGAACGATTTATGAGTATTATTTAAAAAGTCAATTTGA GACAGGTGCAGTTCATTAAAAACAGCTGGGGAGCTGGAAGCAGAGGACGT AAGGCATTGGTGATCCATATCGTGCTGACGGCGTTCTGCCGTGCGGTGCA GCATGTTGCAGCAAGCCGCAGAGCTGCAGAAAAGTCAACGTGGCATCAAC AGGGCAGATTAATGGGATGGAAACGCCATGGCATTGTGCATGCAGATCTT GCGGTGCTCATTTGGAAAACAACTTAGTTGCTGTAGGTAAGTGTTCCGGT TGTCACCCGTGATCACATGGCGGCGAACTACTTGGGCAAGTCCTAGTGTG ATCCTAGCTTCAGCCCCAGCGATCGAACTCTAACTGTAGCCCCTGGATCG AGGGCTCAATCCGCTTCCTGACTGAATGAACCCTAAGCGCCAAACCTACG CCGACTCAAAATGGTTTTCTTTGAGTCATGCGCGTAGTAGGGGTAAATAG GCACCATGCTATTGTGGTTGACCACTGGGCAACAGGTGCATCTGCTGCAG TGCTGCTCATTTGACTTTGAAGGGTCATATGTTCAGCCACAATATCCTTG TTGTTGTCACTTCACTCAGCTGCCCTGAACAAGCACTTGACTTCACTCAG CTGCCCTGAACAAGCACTTGACACCGGATGCTGTCACGCGCAACTGGTGA TGACAATCATGAGTCAGTGAGTCGTCTAGCTGGCCCCTCAGACCGCTGCG TGTGGCTTGCGCTTGCATGCAGGGGGATGATCCGCTCACCATCGGCCAGG CGTCCCGTCAAATTGAAATTGAGATCAGCTCAACTGCGACATTGGTGGGG GGGACCTTTGATTTCATGTTCAACGGGCAGCTGGTCACTATTGCCACAAA TGCAGGCGATGACGCATGCGAGGCGGTGAGTGCAAGTGCTGCCTATTGTC ATTGTGCTTGCATGATGCTCGTATCGTCATTTTTTTTATATTACAGTCAT GCTTTAAACGGGACCAACTTGTAG
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Coding sequence (CDS) from alignment at Contig_162:140631..144454-

>mRNA_16462 ID=mRNA_16462|Name=jgi.p|Trimin1|177974|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=735bp|location=Sequence derived from alignment at Contig_162:140631..144454- (Tribonema minus UTEX_B_3156 )
ATGCGGTTGCTGCTGCAGCTGCTGGTACTGGCAGCATTGCAACAGACAGC
CACAGCAGTGTGCCCCAATTTCTGCAGCGGGCACGGCACCTGTGGGCCAG
AGAACACCTGCGCTTGCAATGACGGCTGGACAGCAGCAGTGGATTGCAGC
CTCAGGAACTGCCCGCTGGGAGCAGCGTGGGCGGACAAAGCGTATGCAAC
GGACAAGGCGCACGCGGACGTGGAGTGCTCGGGGGCGGGGATCTGCGATG
GGGAGACTGGAGAGTGCCAGTGCTTCACCCCGTACGTGGGCTCAGCTTGC
CAGAGGCTTCGGTGTCCCAACGACTGTTCCTCTCATGGGGTATGCATGAC
GATGGCAGATGTGGTGCGATACTATGGCGCGCTGGGGAGCACGTACGACA
ATTGGGACAAAGACAGCACCACTATGTGCGTGTGCGATGCGGGCTACTTT
GGGTCGGATTGCACTAAGCGCATGTGTCCAAAGGGGGATGATCCGCTCAC
CATCGGCCAGGCGTCCCGTCAAATTGAAATTGAGATCAGCTCAACTGCGA
CATTGGTGGGGGGGACCTTTGATTTCATGTTCAACGGGCAGCTGGTCACT
ATTGCCACAAATGCAGGCGATGACGCATGCGAGGCGGTGAGTGCAAGTGC
TGCCTATTGTCATTGTGCTTGCATGATGCTCGTATCGTCATTTTTTTTAT
ATTACAGTCATGCTTTAAACGGGACCAACTTGTAG
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