mRNA_1646 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|157972 vs. uniprot
Match: A0A835YV80_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV80_9STRA) HSP 1 Score: 718 bits (1854), Expect = 6.200e-259 Identity = 440/440 (100.00%), Postives = 440/440 (100.00%), Query Frame = 1 Query: 1 MGSSGGGSGALATPRAQHGGGSGSAAASAPRFALSAIKEVPSPPPSTDSPASSFATSVTGGSSRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAFRALLSADRVVEVNGKPYVCLACIGRGGSSKVYRVLSADRRVLALKRVAVGADDAAGLAGYANEIALLRRLRGDPAIIALEDAEVDAARGTIALVLELGEVDLSQVLARQRTAEPRSSGGGNGGYGEGLSPHFIRLTWLQMLRAVSALHAARVVHGDLKPANFVLCAGALKLIDFGIAKAIGNDTANISRESQVGTLNYMCPEAILDTGKGAIDPATGRKAALMKLGRPSDVWYVLGCILYQLVYGHTPFSHLRLVQKLQAITDPRHEIVYGAIDDASLLDTMQSCLRWDPQLRAPIDGRDGLLEHRYLHPATGVCI 1320 MGSSGGGSGALATPRAQHGGGSGSAAASAPRFALSAIKEVPSPPPSTDSPASSFATSVTGGSSRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAFRALLSADRVVEVNGKPYVCLACIGRGGSSKVYRVLSADRRVLALKRVAVGADDAAGLAGYANEIALLRRLRGDPAIIALEDAEVDAARGTIALVLELGEVDLSQVLARQRTAEPRSSGGGNGGYGEGLSPHFIRLTWLQMLRAVSALHAARVVHGDLKPANFVLCAGALKLIDFGIAKAIGNDTANISRESQVGTLNYMCPEAILDTGKGAIDPATGRKAALMKLGRPSDVWYVLGCILYQLVYGHTPFSHLRLVQKLQAITDPRHEIVYGAIDDASLLDTMQSCLRWDPQLRAPIDGRDGLLEHRYLHPATGVCI Sbjct: 1 MGSSGGGSGALATPRAQHGGGSGSAAASAPRFALSAIKEVPSPPPSTDSPASSFATSVTGGSSRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAFRALLSADRVVEVNGKPYVCLACIGRGGSSKVYRVLSADRRVLALKRVAVGADDAAGLAGYANEIALLRRLRGDPAIIALEDAEVDAARGTIALVLELGEVDLSQVLARQRTAEPRSSGGGNGGYGEGLSPHFIRLTWLQMLRAVSALHAARVVHGDLKPANFVLCAGALKLIDFGIAKAIGNDTANISRESQVGTLNYMCPEAILDTGKGAIDPATGRKAALMKLGRPSDVWYVLGCILYQLVYGHTPFSHLRLVQKLQAITDPRHEIVYGAIDDASLLDTMQSCLRWDPQLRAPIDGRDGLLEHRYLHPATGVCI 440
BLAST of jgi.p|Trimin1|157972 vs. uniprot
Match: D7G1H4_ECTSI (Possibly a dual-specificity PK n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1H4_ECTSI) HSP 1 Score: 323 bits (827), Expect = 2.070e-98 Identity = 172/308 (55.84%), Postives = 220/308 (71.43%), Query Frame = 1 Query: 400 VEVNGKPYVCLACIGRGGSSKVYRVLSADRRVLALKRVAVG--ADDAAGLA-GYANEIALLRRLRGDPAIIALEDAEVDAARGTIALVLELGEVDLSQVLARQRT--AEPRSSGGGNGGYGEGLSPHFIRLTWLQMLRAVSALHAARVVHGDLKPANFVLCAGALKLIDFGIAKAIGNDTANISRESQVGTLNYMCPEAILDTGKGAIDPATGRKAALMKLGRPSDVWYVLGCILYQLVYGHTPFSHLRLVQKLQAITDPRHEIVYGAIDDASLLDTMQSCLRWDPQLRAPIDGRDGLLEHRYLHPAT 1308 V VNG Y+ A IGRGGSSKV+RV++ D +LALK V V A++A L Y+NEI LL+ L+G+ II LE++EVD RG I +VLELGE DL Q++ + + A R+ G + GL +F+R+ W QML+AV A+H RVVHGDLKPANFV G+LKLIDFGIAKAI NDT NISR+S+VGT+NYMCPEA DTG G +DPATG + ++K GRPSD+W LGCILYQ+ +G TPFSHL ++ K++AITDP H I + ++D L++T+++CLR DP RA I G DGLL H YLHP Sbjct: 425 VMVNGVLYLKTAQIGRGGSSKVFRVVAPDCEMLALKVVKVDNHAENAKALLDSYSNEIELLKSLQGNRFIINLENSEVDRRRGLIYIVLELGETDLDQLMRQYKANIASSRADPKALGLFPGGLDANFVRVIWQQMLKAVQAMHEQRVVHGDLKPANFVFVKGSLKLIDFGIAKAISNDTTNISRDSRVGTMNYMCPEAFEDTGNGELDPATGSQKPVIKQGRPSDIWS-LGCILYQMAHGKTPFSHLGMLNKIRAITDPNHAIAFSDLEDGFLVETLRACLRRDPAERASIGGADGLLSHPYLHPTA 731
BLAST of jgi.p|Trimin1|157972 vs. uniprot
Match: A0A6H5LCV9_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCV9_9PHAE) HSP 1 Score: 325 bits (833), Expect = 4.890e-97 Identity = 173/308 (56.17%), Postives = 221/308 (71.75%), Query Frame = 1 Query: 400 VEVNGKPYVCLACIGRGGSSKVYRVLSADRRVLALKRVAVG--ADDAAGLA-GYANEIALLRRLRGDPAIIALEDAEVDAARGTIALVLELGEVDLSQVLARQRT--AEPRSSGGGNGGYGEGLSPHFIRLTWLQMLRAVSALHAARVVHGDLKPANFVLCAGALKLIDFGIAKAIGNDTANISRESQVGTLNYMCPEAILDTGKGAIDPATGRKAALMKLGRPSDVWYVLGCILYQLVYGHTPFSHLRLVQKLQAITDPRHEIVYGAIDDASLLDTMQSCLRWDPQLRAPIDGRDGLLEHRYLHPAT 1308 V VNG Y+ A IGRGGSSKV+RV++ D +LALK V V A++A GL Y+NEI LL+ L+G+ II LE++EVD RG I +VLELGE DL Q++ + + A R+ G + GL +F+R+ W QML+AV A+H RVVHGDLKPANFV G+LKLIDFGIAKAI NDT NISR+S+VGT+NYMCPEA DTG G +DPATG + ++K GRPSD+W LGCILYQ+ +G TPFSHL ++ K++AITDP H I + ++D L++T+++CLR DP RA I G DGLL H YLHP Sbjct: 766 VMVNGVLYLKTAQIGRGGSSKVFRVVAPDCEMLALKVVKVDNHAENAKGLLDSYSNEIELLKSLQGNRFIINLENSEVDRRRGLIYIVLELGETDLDQLMRQYKANIASSRADPKALGLFPGGLDANFVRVIWQQMLKAVQAMHEQRVVHGDLKPANFVFVKGSLKLIDFGIAKAISNDTTNISRDSRVGTMNYMCPEAFEDTGNGELDPATGSQKPVIKQGRPSDIWS-LGCILYQMAHGKTPFSHLGMLNKIRAITDPTHAIAFSDLEDGFLVETLRACLRRDPSERASIGGTDGLLSHPYLHPTA 1072
BLAST of jgi.p|Trimin1|157972 vs. uniprot
Match: W7TN76_9STRA (Ttk family protein kinase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN76_9STRA) HSP 1 Score: 315 bits (807), Expect = 8.060e-94 Identity = 179/322 (55.59%), Postives = 216/322 (67.08%), Query Frame = 1 Query: 367 AFRALLSADRVVEVNGKPYVCLACIGRGGSSKVYRVLSADRRVLALKRVAVGADDAAGLAGYANEIALLRRLRGDPAIIALEDAEVDAARGTIALVLELGEVDLSQVLARQRTAEPRSSGGGNGGYGEG-LSPHFIRLTWLQMLRAVSALHAARVVHGDLKPANFVLCAGALKLIDFGIAKAIGNDTANISRESQVGTLNYMCPEAILDTGKGAIDP-ATGRKAALMKLGRPSDVWYVLGCILYQLVYGHTPFSHLRLVQKLQAITDPRHEIVYGAID----DASLLDTMQSCLRWDPQLRAPI-DGRDGLLEHRYLHPATG 1311 +F LLS+ + +N Y+ L +GRGGSSKV+RVLS R+ ALKRV V D L +ANEI LL RLRG P II L D+ VD A G + +++ELGE+DLS++LA Q AE +G + G G LS +F+R W QMLRAV +H R+VHGDLKPANFV G LKLIDFGIAKAIGNDT NI RESQVGT+NYM PEAILDTG G P A GR+A MK+GR SDVW LGCILYQLVYG TPF+ L L+QKL I D R++I + + D + DT+Q CLR DP R PI G LL+H +L +TG Sbjct: 741 SFDMLLSSRNFMTLNNTQYLRLDVLGRGGSSKVFRVLSESGRIYALKRVRVPPKDRKALESFANEITLLARLRGHPCIIQLIDSTVDKATGLVLMLMELGEIDLSKLLAEQAAAEALDAGNDSRGKGRRPLSLNFVRFVWEQMLRAVHCVHEERIVHGDLKPANFVFVRGRLKLIDFGIAKAIGNDTTNIMRESQVGTVNYMSPEAILDTGNGREQPGAGGRRAPCMKIGRASDVWS-LGCILYQLVYGKTPFADLNLIQKLHCIVDERYQIAFPDDELHFLDPDVRDTIQQCLRRDPTARPPIAGGTSSLLQHPFLQ-STG 1060
BLAST of jgi.p|Trimin1|157972 vs. uniprot
Match: A0A7S4JT97_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JT97_9STRA) HSP 1 Score: 310 bits (793), Expect = 2.990e-93 Identity = 167/312 (53.53%), Postives = 215/312 (68.91%), Query Frame = 1 Query: 370 FRALLSADRVVEVNGKPYVCLACIGRGGSSKVYRVLSADRRVLALKRVAVGADDAAGLAGYANEIALLRRLRGDPAIIALEDAEVDAARGTIALVLELGEVDLSQVLARQRTAEPRSSGGGNGGYGEGLSPHFIRLTWLQMLRAVSALHAARVVHGDLKPANFVLCAGALKLIDFGIAKAI-GNDTANISRESQVGTLNYMCPEAILDTGKGAIDPATGRKAALMKLGRPSDVWYVLGCILYQLVYGHTPFSHLRLVQKLQAITDPRHEIVYGAIDDASLLDTMQSCLRWDPQLRAPIDGRDGLL-EHRYLH 1299 F L++ D ++ VN PY L IG+GGS KVYR LS + VLA+K+V + D G++GYANEI LL+RLRG+PAII + D+EVD R I LV+E+GEVDL+ VL +Q + +GG + + +FIRLTW QML AV +H R++HGDLKPANF+ G LKLIDFGIAKAI +DT NI R+SQ+GTLNYM PEAILD+G +G A M+ G+PSDVW LGCILYQ+ YG TPF+ L ++QKLQAI +P H+I Y D + +D +Q CLR P+ RAPI G++GLL EH +LH Sbjct: 593 FLPLVNEDNILRVNSVPYAKLGVIGKGGSCKVYRALSKECSVLAIKKVKLAGMDKKGISGYANEIKLLKRLRGNPAIIQMFDSEVDLKRKAIFLVMEVGEVDLNHVLQQQALMDGEQTGGTSR-----RNINFIRLTWQQMLSAVQCIHEERIIHGDLKPANFLFVRGTLKLIDFGIAKAIQSDDTTNIYRDSQIGTLNYMSPEAILDSG-------SGEDGARMRCGKPSDVW-ALGCILYQMCYGRTPFAELHIIQKLQAIVNPNHKIKYPDTIDEAAIDAIQLCLRRTPESRAPIIGKNGLLNEHVFLH 891
BLAST of jgi.p|Trimin1|157972 vs. uniprot
Match: A0A1E7FGH7_9STRA (Kinase-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FGH7_9STRA) HSP 1 Score: 286 bits (731), Expect = 1.900e-90 Identity = 160/313 (51.12%), Postives = 208/313 (66.45%), Query Frame = 1 Query: 370 FRALLSADRVVEVNGKPYVCLACIGRGGSSKVYRVLSADRRVLALKRVAVGADDAAGLAGYANEIALLRRLRGDPAIIALEDAEVDAARGTIALVLELGEVDLSQVLARQRTAEPRSSGGGNGGYGEGLSPHFIRLTWLQMLRAVSALHAARVVHGDLKPANFVLCAGALKLIDFGIAKAIGND-TANISRESQVGTLNYMCPEAILDTGKGAIDPATGRKAALMKLGRPSDVWYVLGCILYQLVYGHTPFSHLRLVQKLQAITDPRHEIVYGAIDDA-SLLDTMQSCLRWDPQLRAPIDGRDGLL-EHRYLH 1299 F L+ D ++ V Y L IG+GGS KVYR LS V+A+K+V + DA + GYANEI+LL+RLRG+PAII + D+EVD R +I +V+ELGEVDL+ VL ++ + S L+ +FIRLTW QML AV +H R++H DLKPANF+ GALKLIDFGIAKAI ND T NI RE+ +GTLNYM PE+ILDTG +G A M++GRPSDVW LGCILY++VYG TPF+ L +QKLQAI + H I + ++A + +D M+ CL +P+ R PI G+ GLL EH +LH Sbjct: 15 FLPLVHEDNILRVRDSTYAKLGVIGKGGSCKVYRALSKKCSVVAIKKVKLAGMDAKAIEGYANEISLLKRLRGNPAIIQMYDSEVDLHRKSIFVVMELGEVDLNHVLQQRALNDTSRS----------LNMNFIRLTWQQMLSAVHCIHEERIIHSDLKPANFLFVRGALKLIDFGIAKAIANDDTTNIYRENHIGTLNYMSPESILDTG-------SGEDGARMRIGRPSDVWS-LGCILYEMVYGKTPFAKLHFIQKLQAIVNTSHAIHFPEDEEAEAAIDAMKQCLCRNPEERPPIIGKHGLLNEHWFLH 309
BLAST of jgi.p|Trimin1|157972 vs. uniprot
Match: A0A7S2WSW6_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WSW6_9STRA) HSP 1 Score: 298 bits (762), Expect = 5.720e-90 Identity = 161/315 (51.11%), Postives = 216/315 (68.57%), Query Frame = 1 Query: 376 ALLSADRVVEVNGKPYVCLACIGRGGSSKVYRVLS---ADRRVLALKRVAVGADDAAGLAGYANEIALLRRLRGDPAIIALEDAEVDAARGTIALVLELGEVDLSQVLARQRTAEPRSSGGGNGGYGEGLSPHFIRLTWLQMLRAVSALHAARVVHGDLKPANFVLCAGALKLIDFGIAKAIGNDTANISRESQVGTLNYMCPEAILDTGKGAID-PATGRKAALMKLGRPSDVWYVLGCILYQLVYGHTPFSHLRLVQKLQAITDPRHEIVYGAIDDAS--LLDTMQSCLRWDPQLRAPIDGRDGLLEHRYLHP 1302 +L S + VNGKPY+ LA IGRGGSSKV++VL+ ++ ++ A+KR+ + D + +A + NEI+LL RLRG+ II L D+EVD + I +V+E GEVDL+ +L R R ++ LS +FIRLTW+ ML AV A+H R+VHGDLKPANF+ G LKLIDFGIAKAI DT NI R++QVGTLNYM PEAI+DT A P G +K GR SD+W +GCILYQ++YGHTPF L+L+QK+ I+DP ++I + ++ A+ LLD ++SCL++DPQLR PI G GLLEH +L+P Sbjct: 306 SLFSPKNLFIVNGKPYIRLALIGRGGSSKVFKVLALQESEPQIYAMKRIKLTRTDKSSIASFVNEISLLERLRGNSNIIRLHDSEVDLEKKVIYMVMEHGEVDLNTMLQRGRASKT-------------LSVNFIRLTWMNMLEAVHAIHEERIVHGDLKPANFLFVKGKLKLIDFGIAKAISCDTTNIMRDTQVGTLNYMSPEAIIDTNSAAGSRPKIGAPGMKLKQGRASDIWS-MGCILYQMIYGHTPFHELKLIQKIHCISDPNYKIAFPPLEVANPDLLDVVKSCLQFDPQLRPPIVG--GLLEHAFLNP 604
BLAST of jgi.p|Trimin1|157972 vs. uniprot
Match: A0A1Z5J741_FISSO (Serine/threonine-protein kinase TTK/MPS1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J741_FISSO) HSP 1 Score: 293 bits (750), Expect = 3.250e-87 Identity = 162/307 (52.77%), Postives = 207/307 (67.43%), Query Frame = 1 Query: 370 FRALLSADRVVEVNGKPYVCLACIGRGGSSKVYRVLSADRRVLALKRVAVGADDAAGLAGYANEIALLRRLRGDPAIIALEDAEVDAARGTIALVLELGEVDLSQVLARQRTAEPRSSGGGNGGYGEGLSPHFIRLTWLQMLRAVSALHAARVVHGDLKPANFVLCAGALKLIDFGIAKAI-GNDTANISRESQVGTLNYMCPEAILDTGKGAIDPATGRKAALMKLGRPSDVWYVLGCILYQLVYGHTPFSHLRLVQKLQAITDPRHEIVYGAIDDASLLDTMQSCLRWDPQLRAPIDGRDGLLEH 1287 F L+ ++ VNG PY L IGRGGS KVYR LS + V+A+K+V + D + GY+NEIALL+RLRG+PAII + D++VD R +I L +ELGEVDL+ VL +Q A L+ +F+RLTW QML AV ++H R++HGDLKPANF+ GALKLIDFGIAKAI +DT NI RESQ+GTLNYM PEAILDTG ++GR MKLGR SD+W LGCILYQ+VYG TPF+ L ++QKLQAI +P H+I + D +D ++ CL+ + Q R PI G +GLL H Sbjct: 572 FLPLVKESNMIRVNGVPYAKLGVIGRGGSCKVYRALSTNCNVIAIKKVKLDGMDKKAIDGYSNEIALLKRLRGNPAIIQMFDSQVDLERKSILLTMELGEVDLNHVLQQQEIAMAAKRDHRQ------LNLNFVRLTWQQMLTAVHSIHEERIIHGDLKPANFLFVRGALKLIDFGIAKAIQSDDTTNIYRESQIGTLNYMSPEAILDTGS-----SSGRLQ--MKLGRASDIWS-LGCILYQMVYGKTPFADLHMIQKLQAIINPNHKIAFPGDMDECAIDAIKKCLQRNAQDRPPIIGENGLLNH 864
BLAST of jgi.p|Trimin1|157972 vs. uniprot
Match: A0A812Z6F4_9DINO (Mps1 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Z6F4_9DINO) HSP 1 Score: 290 bits (741), Expect = 3.720e-86 Identity = 167/345 (48.41%), Postives = 212/345 (61.45%), Query Frame = 1 Query: 400 VEVNGKPYVCLACIGRGGSSKVYRVLSADRRVLALKRVAVGADDAAGLAGYANEIALLRRLRGDPAIIALEDAEVDAARGTIALVLELGEVDLSQVLARQRTAEPRSSGGGNG------------------------GYGEG---LSPHFIRLTWLQMLRAVSALHAARVVHGDLKPANFVLCAGALKLIDFGIAKAIGNDTANISRESQVGTLNYMCPEAILDT---GKGAIDPAT----------GRKAALMKLGRPSDVWYVLGCILYQLVYGHTPFSHLRLVQKLQAITDPRHEIVYGAIDDASLLDTMQSCLRWDPQLRAPIDGRDGLLEHRYLHPATGV 1314 + VNG+ Y+ L C+G+GGSS+VYRVL + ++ ALKRV +G D LA + NEIAL+RRL+G II+L +AEVD A + LV+ELGEVDL+ ++ R R A+ +GG G G G L +F+RLTW QML +V+ +H +R+VHGDLKPANFV G LKLIDFGIAK I +T NI RESQVGTLNYM PEAI+DT G G + M+LGR SD+W LGCILYQ+ YG TPF+ L L+QK++AITDP +EI + + D LL T++ CLR DP R I+G GLL H YLHP V Sbjct: 316 ITVNGRKYLRLECVGKGGSSRVYRVLGPELKMWALKRVKLGRVDRRSLAPFTNEIALMRRLKGQDTIISLREAEVDLAGKQVLLVMELGEVDLNALMRRHR-ADGDETGGVQGAAXXXXXXXXXXXXXXXXXXXASPGRAVGATVLESNFLRLTWQQMLGSVATIHRSRIVHGDLKPANFVFVRGQLKLIDFGIAKVISANTTNIYRESQVGTLNYMSPEAIVDTAGNGPGGMGXXXXXXXXXXXXXASSRGKMRLGRASDIWS-LGCILYQMAYGKTPFADLGLIQKIRAITDPTYEIPFPPLSDPQLLSTIKLCLRRDPAKRPAIEGPGGLLAHAYLHPEYAV 658
BLAST of jgi.p|Trimin1|157972 vs. uniprot
Match: A0A5A8DM07_CAFRO (Protein kinase domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DM07_CAFRO) HSP 1 Score: 291 bits (746), Expect = 3.900e-86 Identity = 168/345 (48.70%), Postives = 213/345 (61.74%), Query Frame = 1 Query: 400 VEVNGKPYVCLACIGRGGSSKVYRVLSADRRVLALKRVAVGADDAAGLAGYANEIALLRRLRGDPAIIALEDAEVDAARGTIALVLELGEVDLSQVLARQRTAEPRSSGG----------------GNGGYGEGLSP-----------HFIRLTWLQMLRAVSALHAARVVHGDLKPANFVLCAGALKLIDFGIAKAIGNDTANISRESQVGTLNYMCPEAILDT---GKGAIDPAT----------GRKAALMKLGRPSDVWYVLGCILYQLVYGHTPFSHLRLVQKLQAITDPRHEIVYGAIDDASLLDTMQSCLRWDPQLRAPIDGRDGLLEHRYLHPATGV 1314 + VNG+ Y+ L C+G+GGSS+VYRVL + ++ ALKRV +G D LA + NEIAL+RRL+G II+L +AEVD A + LV+ELGEVDL+ ++ R R A+ +GG G G G SP +F+RLTW QML +V+ +H +R+VHGDLKPANFV G LKLIDFGIAK I +T NI RESQVGTLNYM PEAI+DT G G + M+LGR SD+W LGCILYQ+ YG TPF+ L L+QK++AITDP +EI + + D LL T++ CLR DP R I+G GLL H YLHP V Sbjct: 423 ITVNGRKYLRLECVGKGGSSRVYRVLGPELKMWALKRVKLGRVDRRSLAPFTNEIALMRRLKGQDTIISLREAEVDLAGKQVLLVMELGEVDLNALMRRHR-ADGDETGGVPGAAXXXXXXXXGHDGAGVAGGAASPGRAVGATVLESNFLRLTWQQMLGSVATIHRSRIVHGDLKPANFVFVRGQLKLIDFGIAKVISANTTNIYRESQVGTLNYMSPEAIVDTAGNGPGGMGXXXXXXXXXXXXXASSRGKMRLGRASDIWS-LGCILYQMAYGKTPFADLGLIQKIRAITDPTYEIPFPPLSDPQLLSTIKLCLRRDPAKRPAIEGPGGLLAHAYLHPEYAV 765 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157972 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_1646 ID=mRNA_1646|Name=jgi.p|Trimin1|157972|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1323bp|location=Sequence derived from alignment at Contig_4:1060370..1066064+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGGCAGCTCTGGCGGCGGCAGCGGCGCGCTGGCGACGCCGCGCGCACAback to top protein sequence of jgi.p|Trimin1|157972 >Trimin1|157972|e_gw1.4.342.1 ID=Trimin1|157972|e_gw1.4.342.1|Name=jgi.p|Trimin1|157972|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=441bp MGSSGGGSGALATPRAQHGGGSGSAAASAPRFALSAIKEVPSPPPSTDSPback to top mRNA from alignment at Contig_4:1060370..1066064+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_1646 ID=mRNA_1646|Name=jgi.p|Trimin1|157972|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5695bp|location=Sequence derived from alignment at Contig_4:1060370..1066064+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_4:1060370..1066064+ >mRNA_1646 ID=mRNA_1646|Name=jgi.p|Trimin1|157972|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1323bp|location=Sequence derived from alignment at Contig_4:1060370..1066064+ (Tribonema minus UTEX_B_3156 )back to top |