mRNA_16377 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|177684
Unique Name	mRNA_16377
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|177684 vs. uniprot
Match: A0A835Z836_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z836_9STRA)

HSP 1 Score: 742 bits (1915), Expect = 2.810e-270
Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 1

Query:    1 MNSPNPGLHNCRFSLCSVLPPPQLVAGFLEVTGLQLAPTFENFIHKLAILPNLSFAWGCVYNATFYEKLLAMTLGPLVAVALLGCSWLWAVAREHRLRRVAGADAARAARLKALRKHWTAFLALTFLVYGTVSSIIFQTFACDYMQELDTYYLRADYSIQCYNNSEYWRYFAYAMTMFVVYPLGVPALYALLLCFKRRQHQARQGAVAAAPSVQGLEPHWDLVHASSFLWAQYKPKAEWWEMVECARRVVLTGVLVFILPGSAGQAAVSVLFAFLLTLIFMAVRPHREHAMQRQYLLGAVIVYFASMNALLIKSQVSGAQSQLVVGIVMIIISTALIVAAVAQTLYGVADLVRGSERQPSPGPLGPSNFTAGQPRPQCA 1137
            MNSPNPGLHNCRFSLCSVLPPPQLVAGFLEVTGLQLAPTFENFIHKLAILPNLSFAWGCVYNATFYEKLLAMTLGPLVAVALLGCSWLWAVAREHRLRRVAGADAARAARLKALRKHWTAFLALTFLVYGTVSSIIFQTFACDYMQELDTYYLRADYSIQCYNNSEYWRYFAYAMTMFVVYPLGVPALYALLLCFKRRQHQARQGAVAAAPSVQGLEPHWDLVHASSFLWAQYKPKAEWWEMVECARRVVLTGVLVFILPGSAGQAAVSVLFAFLLTLIFMAVRPHREHAMQRQYLLGAVIVYFASMNALLIKSQVSGAQSQLVVGIVMIIISTALIVAAVAQTLYGVADLVRGSERQPSPGPLGPSNFTAGQPRPQCA
Sbjct:    1 MNSPNPGLHNCRFSLCSVLPPPQLVAGFLEVTGLQLAPTFENFIHKLAILPNLSFAWGCVYNATFYEKLLAMTLGPLVAVALLGCSWLWAVAREHRLRRVAGADAARAARLKALRKHWTAFLALTFLVYGTVSSIIFQTFACDYMQELDTYYLRADYSIQCYNNSEYWRYFAYAMTMFVVYPLGVPALYALLLCFKRRQHQARQGAVAAAPSVQGLEPHWDLVHASSFLWAQYKPKAEWWEMVECARRVVLTGVLVFILPGSAGQAAVSVLFAFLLTLIFMAVRPHREHAMQRQYLLGAVIVYFASMNALLIKSQVSGAQSQLVVGIVMIIISTALIVAAVAQTLYGVADLVRGSERQPSPGPLGPSNFTAGQPRPQCA 379

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BLAST of jgi.p|Trimin1|177684 vs. uniprot
Match: A0A835ZA22_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA22_9STRA)

HSP 1 Score: 530 bits (1364), Expect = 5.810e-187
Identity = 272/309 (88.03%), Postives = 286/309 (92.56%), Query Frame = 1

Query:   40 SLCSVLPPPQLVAGFLEVTGLQLAPTFENFIHKLAILPNLSFAWGCVYNATFYEKLLAMTLGPLVAVALLGCSWLWAVAREHRLRRVAGADAARAARLKALRKHWTAFLALTFLVYGTVSSIIFQTFACDYMQELDTYYLRADYSIQCYNNSEYWRYFAYAMTMFVVYPLGVPALYALLLCFKRRQ-HQARQGAVAAAPSVQGLEPHWDLVHASSFLWAQYKPKAEWWEMVECARRVVLTGVLVFILPGSAGQAAVSVLFAFLLTLIFMAVRPHREHAMQRQYLLGAVIVYFASMNALLIKSQVSGAQS 963
            SLC+VL PPQLVAGFLEVTGLQLAP FENFIHKLA L NLSFAWGCVYNATFYE+LL MTLGPLVAVALLGCSWLWA+ REHR++RVAGADAARA RLKALRKHWTAFLALTFLVYGTVSS IFQTFACDY+QELDTYYLRADYSIQCYNN EYWRYFAYAMTMFVVYPLGVPALYALLLC +RRQ HQA+QG VAAAP+      HWDLVHASSFLWAQYKP+AEWWE+VECARRVVLTGVLVFILPGSAGQAAVSVLFAF L L+FMAVRP+REH MQRQYLLGAVIVYFASMNALLIKSQVS  Q+
Sbjct:    1 SLCAVLLPPQLVAGFLEVTGLQLAPAFENFIHKLATLLNLSFAWGCVYNATFYEQLLVMTLGPLVAVALLGCSWLWALVREHRVQRVAGADAARAVRLKALRKHWTAFLALTFLVYGTVSSTIFQTFACDYVQELDTYYLRADYSIQCYNNLEYWRYFAYAMTMFVVYPLGVPALYALLLCSRRRQQHQAQQGLVAAAPN-----SHWDLVHASSFLWAQYKPEAEWWEIVECARRVVLTGVLVFILPGSAGQAAVSVLFAFFLALMFMAVRPYREHTMQRQYLLGAVIVYFASMNALLIKSQVSDDQA 304

[Close]

BLAST of jgi.p|Trimin1|177684 vs. uniprot
Match: A0A835ZGE0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGE0_9STRA)

HSP 1 Score: 347 bits (889), Expect = 6.400e-107
Identity = 200/374 (53.48%), Postives = 248/374 (66.31%), Query Frame = 1

Query:   67 QLVAGFLEVTGLQLAPTFENFIHKLAILPNLSFAWGCVYNATFYEKLLAMTLGPLVAVALLGCSWLWAVAREHRLRRVAGADAARA--ARLKALRKHWTAFLALTFLVYGTVSSIIFQTFACDYMQELDTYYLRADYSIQCYNNSEYWRYFAYAMTMFVVYPLGVPALYALLLCFKRRQHQ---------------ARQGAVAAAPS-------------VQGLE------------PHWDLVHASSFLWAQYKPKAEWWEMVECARRVVLTGVLVFILPGSAGQAAVSVLFAFLLTLIFMAVRPHREHAMQRQYLLGAVIVYFASMNALLIKSQVS-GAQSQLVVGIVMIIISTALIVAAVAQTLYGVADLVR 1059
            QLVAGF+ +TGLQLA  FE FI +LA++P+ +F +GC+++A FY+KLL +TL PL+ VALLGCSWLW+++R                 A  +ALRKHWTA LA TFLVYGT SS IFQTFAC  ++ELD  YLRADYSI+CY+   YW YFAYAM M +VYP+GVPAL A+LL  KRR ++               AR+   A  PS             V  LE             +  LV ASSF+WA Y   AEWWE+VECARRV+LTG+LVFI PG+ GQAAVS+L AF+  L FMAVRPHR+HAM +QYLLGA+IVYFAS NALL+   +S  AQSQ VVGI+++++S  LIVAA  QT+ G  D  +
Sbjct:  656 QLVAGFMSITGLQLAAPFEAFIRRLAVIPDFTFIFGCIFHANFYQKLLVVTLAPLLPVALLGCSWLWSLSRXXXXXXXXXXXXXXXXXAHARALRKHWTALLAFTFLVYGTTSSYIFQTFACASVEELDESYLRADYSIRCYDR-RYWPYFAYAMAMILVYPVGVPALNAVLLYRKRRLNKEAELQAAFARANAAAARRAPAAKMPSQTSQVALPSSHATVSQLELERSNGGSEREQEYSGLVGASSFIWAPYTNAAEWWELVECARRVLLTGILVFIAPGTPGQAAVSMLMAFVALLAFMAVRPHRDHAMHQQYLLGALIVYFASTNALLLDLNISQSAQSQTVVGILLVVLSVVLIVAAAVQTVSGAVDFTK 1028

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BLAST of jgi.p|Trimin1|177684 vs. uniprot
Match: A0A836CDT7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDT7_9STRA)

HSP 1 Score: 344 bits (883), Expect = 5.770e-105
Identity = 190/357 (53.22%), Postives = 234/357 (65.55%), Query Frame = 1

Query:   67 QLVAGFLEVTGLQLAPTFENFIHKLAILPNLSFAWGCVYNATFYEKLLAMTLGPLVAVALLGCSWLWAVAREHRLRRVAGADAARAARLKALRKHWTAFLALTFLVYGTVSSIIFQTFACDYMQELDTYYLRADYSIQCYNNSEYWRYFAYAMTMFVVYPLGVPALYALLLCFKRRQHQ----------ARQGAVAAAPS------------------------------------------------------VQGLEPHWDLVHASSFLWAQYKPKAEWWEMVECARRVVLTGVLVFILPGSAGQAAVSVLFAFLLTLIFMAVRPHREHAMQRQYLLGAVIVYFASMNALLIKSQ 945
            QL+ GF+ +TGL+LAP+FE FI  L++LP LSF WGCV++A+FY++LL MTL PLV VALLG SWL  +AR  ++R      AA+A R  AL KHWTAFLALTFLVYGTVSSIIFQTFACD++QEL T YLR DYSI+CYNN+EYW YF YAM M +VYP+G+PALYA+L+ +++R H+          A   A + AP+                                                       Q  E   DLV AS+FLWAQY P+AEWWE++EC RR++LTG LVFILPGSAGQAAVS+  AF L L+FMA +PH+E+A + QYLLGAVIVY AS  ALLIK+Q
Sbjct:  865 QLIGGFISITGLELAPSFETFIRTLSVLPILSFGWGCVWDASFYQRLLVMTLFPLVLVALLGISWLRVLARVRKMRCSVDDAAAQAVRQHALHKHWTAFLALTFLVYGTVSSIIFQTFACDHVQELHTAYLRVDYSIECYNNTEYWWYFGYAMAMMLVYPIGIPALYAVLV-YRKRCHKMTMAAAIGGDAHMRAFSTAPACVPDPLRRGCDKSAEAGLGISLSMENSPASSTLRRAPMSNLAVEQLGDTTEAKLAQDQEVLTDLVSASAFLWAQYTPEAEWWELLECLRRILLTGALVFILPGSAGQAAVSMFMAFALLLVFMAKKPHKEYAARGQYLLGAVIVYMASSTALLIKAQ 1220

[Close]

BLAST of jgi.p|Trimin1|177684 vs. uniprot
Match: A0A835ZAX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAX5_9STRA)

HSP 1 Score: 321 bits (822), Expect = 5.690e-103
Identity = 173/323 (53.56%), Postives = 230/323 (71.21%), Query Frame = 1

Query:   67 QLVAGFLEVTGLQLAPTFENFIHKLAILPNLSFAWGCVYNATFYEKLLAMTLGPLVAVALLGCSWLWAVAREHRLRRVAGADAARAARLKALRKHWTAFLALTFLVYGTVSSIIFQTFACDYMQELDT----YYLRADYSIQCYNNSEYWRYFAYAMTMFVVYPLGVPALYALLLCFKR--RQHQARQGAVAAAPSVQGLEPHWDLVHASSFLWAQYKPKAEWWEMVECARRVVLTGVLVFILPGSAGQAAVSVLFAFLLTLIFMAVRPHREHAMQRQYLLGAVIVYFASMNALLIKSQVSG--AQSQLVVGIVMIIISTALI 1011
            QL+AG + +TGLQLAP+FE+FIH LAILP++SFA+GC+++A+FYE+LL MTL PLV V  LGCSWLW++ R HRL+  A    A AA  ++LR+HWT FLA TF +Y TVSS +FQTFACD ++E  +    +YLRADYSI CY+   YW  FAY   M +VYP+G+PALYA +L  KR   Q + +   ++A  +  G       + ASSFLW QY  +A WWE VECARRV+ TG LVFI+PG+AGQAAVSVL  F+  + F+AV+P+R+ A   QY LGA+IV+ +S NALL+K   S    QSQ+++G ++I++S  LI
Sbjct:  103 QLIAGLVSITGLQLAPSFESFIHLLAILPDVSFAFGCIFDASFYERLLFMTLMPLVPVIFLGCSWLWSMRRVHRLQETADRAPALAAHAESLRRHWTLFLAWTFFIYSTVSSTVFQTFACDKIEEWSSRPYNWYLRADYSITCYDQL-YWCNFAYTAVMVLVYPIGIPALYAYVLHRKRCADQLERQYSDMSARGANTGSNGESSFIVASSFLWDQYTDEAYWWEPVECARRVLFTGFLVFIMPGTAGQAAVSVLLTFVAVVSFLAVQPYRQRARHYQYFLGALIVFLSSFNALLLKVDASSDNGQSQVIIGALLIVLSVVLI 424

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BLAST of jgi.p|Trimin1|177684 vs. uniprot
Match: A0A835YT01_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT01_9STRA)

HSP 1 Score: 296 bits (759), Expect = 1.950e-95
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1

Query:   67 QLVAGFLEVTGLQLAPTFENFIHKLAILPNLSFAWGCVYNATFYEKLLAMTLGPLVAVALLGCSWLWAVAREHRLRRVAGADAARAARLKALRKHWTAFLALTFLVYGTVSSIIFQTFACDYMQELDTYYLRADYSIQCYNNSEYWR 507
            QLVAGFLEVTGLQLAPTFENFIHKLAILPNLSFAWGCVYNATFYEKLLAMTLGPLVAVALLGCSWLWAVAREHRLRRVAGADAARAARLKALRKHWTAFLALTFLVYGTVSSIIFQTFACDYMQELDTYYLRADYSIQCYNNSEYWR
Sbjct:   95 QLVAGFLEVTGLQLAPTFENFIHKLAILPNLSFAWGCVYNATFYEKLLAMTLGPLVAVALLGCSWLWAVAREHRLRRVAGADAARAARLKALRKHWTAFLALTFLVYGTVSSIIFQTFACDYMQELDTYYLRADYSIQCYNNSEYWR 241

[Close]

BLAST of jgi.p|Trimin1|177684 vs. uniprot
Match: A0A836CEM9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEM9_9STRA)

HSP 1 Score: 307 bits (787), Expect = 3.100e-95
Identity = 180/387 (46.51%), Postives = 242/387 (62.53%), Query Frame = 1

Query:   67 QLVAGFLEVTGLQLAPTFENFIHKLAILPNLSFAWGCVYNATFYEKLLAMTLGPLVAVALLGCSWLWAVAREHRLRRVAGADAARAARLKALRKHWTAFLALTFLVYGTVSSIIFQTFACDYMQELDTYYLRADYSIQCYNNSEYWRYFAYAMTMFVVYPLGVPALYALLLCFKRRQHQ-------------------ARQGAVAAAPSVQGLEPHW--------------------------------------DLVHASSFLWAQYKPKAEWWEMVECARRVVLTGVLVFILPGSAGQAAVSVLFAFLLTLIFMAVRPHREHAMQRQYLLGAVIVYFASMNALLIKSQVSGAQ-SQLVVGIVMIIISTALIVAAVAQTLYGVADL 1053
            QLV+GF+ ++GL+LA  F++F+ +L+ILP+ S  +GC+Y+A+FY +LL MTL PLV +A LGCSWL+A AR  +LRR     AA+ AR  ALR+HWTAFLA TFL++GTVSS IFQ FACD + EL  + LRADY++QCY +  YW YF YAM M VVYP+G+ ALYA LL  KR+  +                   + Q A AA     G +P+                                        +V ASSF+W QY  KA+ WE+VECARR++LTG LVFI P SAGQAA S +FAF   L++   +PH +  +  QY+LGA+IVYFAS++ALL+K   S  + SQLV+GIV+++++ ALI AA+ Q L+ V D+
Sbjct:  161 QLVSGFMSISGLELAEPFQSFMMRLSILPSFSVVFGCIYDASFYTRLLFMTLAPLVPIAFLGCSWLFACARVGQLRRANAHAAAQCARSDALRRHWTAFLAWTFLIFGTVSSTIFQAFACDELPELGQWRLRADYAVQCYVDG-YWGYFGYAMAMLVVYPIGITALYAYLLYLKRQSDRKLDVLAPVEAATGLRSTSNSAQPAGAAIAMYAGAQPNSATDLSVRSIQGSAAAQLSLRSATALGERQSAAVSQSPPGIVGASSFVWDQYHSKAQAWELVECARRLMLTGFLVFIHPQSAGQAAASTVFAFGFLLLYALYKPHHDRTLGHQYILGALIVYFASLSALLLKVDASADEGSQLVMGIVLVMLTVALIGAALLQILFEVVDI 546

[Close]

BLAST of jgi.p|Trimin1|177684 vs. uniprot
Match: A0A835ZPJ6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPJ6_9STRA)

HSP 1 Score: 291 bits (746), Expect = 2.810e-93
Identity = 163/332 (49.10%), Postives = 223/332 (67.17%), Query Frame = 1

Query:   67 QLVAGFLEVTGLQLAPTFENFIHKLAILPNLSFAWGCVYNATFYEKLLAMTLGPLVAVALLGCSWLWAVAREHRLRRVAGADAARAARLKALRKHWTAFLALTFLVYGTVSSIIFQTFACDYMQELDTYYLRADYSIQCYNNSEYWRYFAYAMTMFVVYPLGVPALYALLLCFKRRQHQARQGA-VAAAPSVQGLEPHWD-LVHASSFLWAQYKPKAEWWEMVECARRVVLTGVLVFILPGSAGQAAVSVLFAFLLTLIFMAVRPHREHAMQRQYLLGAVIVYFASMNALLIKSQVSGAQ---SQLVVGIVMIIISTALIVAAVAQTLYGVA 1047
            QL+ GF+ +TGL L   +E F+ KLA + + +   GC+ +  FY+KLLA TL PL+ +AL+GCSWL A     R R  AG  AA+ A L ALR+HWT FL + FL +G+VSS++F+TFAC++ +EL  +YLRADYSIQC+ N  YW Y AYA    +VYP+G+PAL+A+L+  KR+  + +    V A     G     D L  AS FLW QYK +AE+W++ ECARR++LTG + F+LPG AGQAA+S+L +F L L FM  RPHRE  +  QYLLGAVI+Y ++  ALLI  ++  +    S+ VVG +++ ++ ALI AAV QTL  VA
Sbjct:    4 QLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSWLAAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGEWYLRADYSIQCFANG-YWWYAAYAFCAMLVYPIGIPALFAVLVWQKRKLRRCKANLLVPATQDSTGSPSRSDRLFEASGFLWEQYKTQAEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLDYSNEPSSRRVVGWLLVALNVALITAAVFQTLVSVA 334

[Close]

BLAST of jgi.p|Trimin1|177684 vs. uniprot
Match: A0A835Z0D7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0D7_9STRA)

HSP 1 Score: 275 bits (704), Expect = 1.240e-87
Identity = 151/289 (52.25%), Postives = 199/289 (68.86%), Query Frame = 1

Query:  184 NATFYEKLLAMTLGPLVAVALLGCSWLWAVAREHRLRRVAGADAARAARLKALRKHWTAFLALTFLVYGTVSSIIFQTFACDYMQELDTY----YLRADYSIQCYNNSEYWRYFAYAMTMFVVYPLGVPALYALLLCFKRRQHQARQGAVAAAPSVQGLEPHWDLVHASSFLWAQYKPKAEWWEMVECARRVVLTGVLVFILPGSAGQAAVSVLFAFLLTLIFMAVRPHREHAMQRQYLLGAVIVYFASMNALLIKSQVSG--AQSQLVVGIVMIIISTALIVAAVAQT 1032
            +A+FY++LL MTL PLV V  LGCSWLW+  R  RL   AG   A  A ++ALR+HWT FLA T  +YGTVSS +FQ FACD ++E  ++    YLRADYSI CY+   YW YFAYA  M +VYP+G+PALYA +L  +RR  Q +   +  A +  G     D + ASSFLW QY   A WWE+VECARRV+ TG +VF++PG+AGQAAVS+L AF+  + F+AV+PHR+  M  QY LG VIV+ +S+NALL+K +VS    QSQ+V+G ++  +S  L+ AAVA +
Sbjct:    1 DASFYQRLLFMTLMPLVPVIFLGCSWLWSTRRSKRLLETAGRAPALIAHVEALRRHWTLFLAWTLFIYGTVSSTVFQAFACDEIEEWSSHPYNWYLRADYSITCYDR-RYWLYFAYAAVMVLVYPIGIPALYAHVLRCRRRADQRQHCDIPDAAADTGNTSESDFLMASSFLWDQYTDDAHWWELVECARRVLFTGFVVFVMPGTAGQAAVSMLLAFVAAVSFLAVQPHRQRIMHYQYFLGVVIVFLSSVNALLLKVEVSSDDGQSQVVIGALLKALSVVLVCAAVASS 288

[Close]

BLAST of jgi.p|Trimin1|177684 vs. uniprot
Match: A0A835YJS2_9STRA (TRP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJS2_9STRA)

HSP 1 Score: 277 bits (708), Expect = 1.490e-86
Identity = 161/337 (47.77%), Postives = 213/337 (63.20%), Query Frame = 1

Query:   67 QLVAGFLEVTGLQLAPTFENFIHKLAILPNLSFAWGCVYNATFYEKLLAMTLGPLVAVALLGCSWLWAVAREHRLRRVAGADAARAARLKALRKHWTAFLALTFLVYGTVSSIIFQTFACDYMQELDTYYLRADYSIQCYNNSEYWRYFAYAMTMFVVYPLGVPALYALLLCFKRRQHQARQGAVAAAPSVQGLEPHWDLVHASSFLWAQYKPKAEWWEMVECARRVVLTGVLVFILPGSAGQAAVSVLFAFLLTLIFMAVRPHREHAMQRQYLLGAVIVYFASMNALLIKSQVSGA-QSQLVVGIVMIIISTALIVAAVAQTLYGVADLV--RGSE 1068
            QL+ GF+EVTGL     +   I  ++   +L+   GCV    FY+KLLAMTL PL  V LLG SWL A  R  +L+R  G +AA     +ALR+HWTAFLA TFLV+G VSS++F TF C+   ELD  YLRADYS+QCY  SEYW Y  YA  M  VYP+G+ ALY++LL  K +     +G  +    V  L P   LV AS FLW QY  +  WWE+ EC RR+++TG + FILPG+  QA V +L AF   + ++ VRPHR+     QY+ GA+I+Y ++M+ALL K  ++   QSQ +VGIV+I++S A+I AAV QT  G    V  +G+E
Sbjct:   51 QLLWGFMEVTGLAYPQVYATMIAYISFASDLTLVLGCVAELNFYQKLLAMTLAPLAVVVLLGASWLLACWRAQQLQRSDGFEAAYLMHQEALRRHWTAFLAFTFLVFGVVSSVVFLTFVCE---ELD--YLRADYSVQCYT-SEYWAYAVYAAVMLFVYPIGITALYSVLLWRKSKLKMNNKGN-SKIVRVASLAPRSRLVEASGFLWEQYTEETPWWEIAECVRRLLITGFVAFILPGTVSQAVVGMLMAFASLMAYLMVRPHRDRRTYWQYITGALILYLSTMSALLQKLDIAKEPQSQAIVGIVLIVLSVAMIAAAVFQTFAGFTAAVVPKGTE 380

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|177684 vs. uniprot

BLAST of jgi.p|Trimin1|177684 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835Z836_9STRA	2.810e-270	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZA22_9STRA	5.810e-187	88.03	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZGE0_9STRA	6.400e-107	53.48	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CDT7_9STRA	5.770e-105	53.22	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZAX5_9STRA	5.690e-103	53.56	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YT01_9STRA	1.950e-95	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A836CEM9_9STRA	3.100e-95	46.51	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A835ZPJ6_9STRA	2.810e-93	49.10	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A835Z0D7_9STRA	1.240e-87	52.25	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A835YJS2_9STRA	1.490e-86	47.77	TRP domain-containing protein n=1 Tax=Tribonema mi...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_157	contig	Contig_157:335944..337353 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|177684\|e_gw1.157.60.1
Max annot lvl	2759\|Eukaryota
EggNOG OGs	2BFIX@1\|root,2S176@2759\|Eukaryota
Evalue	1.49e-40
Seed ortholog	2880.D8LRF9
Hectar predicted targeting category	other localisation
TranscriptId	178006
Track	FilteredModels1
ProteinId	177684

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|177684	gene_16377	Tribonema minus UTEX_B_3156	gene	Contig_157 335944..337353 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|177684	Trimin1\|177684\|e_gw1.157.60.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_157 335944..337353 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_16377_2	exon_16377_2	Tribonema minus UTEX_B_3156	exon	Contig_157 335944..336444 -
exon_16377_1	exon_16377_1	Tribonema minus UTEX_B_3156	exon	Contig_157 336715..337353 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_16377	CDS_16377	Tribonema minus UTEX_B_3156	CDS	Contig_157 336715..337353 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_157:335944..337353-
coding sequence from alignment at Contig_157:335944..337353-

spliced messenger RNA

>mRNA_16377 ID=mRNA_16377|Name=jgi.p|Trimin1|177684|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1140bp|location=Sequence derived from alignment at Contig_157:335944..337353- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAATTCACCTAATCCTGGTCTGCATAATTGCCGGTTTTCATTGTGTTC
CGTGCTCCCGCCACCCCAGCTCGTCGCTGGTTTTCTTGAGGTGACTGGCC
TACAGCTGGCACCAACATTCGAGAACTTCATCCACAAGCTCGCCATACTG
CCCAACCTGAGCTTTGCATGGGGGTGCGTGTACAACGCCACCTTCTACGA
AAAGCTGCTTGCTATGACGCTGGGACCGCTGGTGGCCGTGGCACTGCTCG
GCTGCTCGTGGCTGTGGGCAGTGGCACGCGAGCACAGGCTGCGGCGGGTG
GCAGGTGCGGACGCCGCGCGGGCGGCACGGCTGAAGGCCCTGCGCAAGCA
CTGGACAGCGTTCCTGGCGCTGACCTTTCTGGTCTACGGCACCGTCAGCA
GCATCATCTTCCAGACATTTGCTTGCGACTATATGCAGGAGCTGGACACT
TACTACCTGCGTGCCGATTACTCCATTCAGTGCTACAACAATTCAGAGTA
CTGGCGGTACTTTGCGTATGCCATGACCATGTTCGTGGTGTACCCCCTCG
GTGTCCCTGCGCTGTACGCGCTGTTGCTGTGCTTCAAGCGGCGGCAGCAC
CAGGCGCGGCAAGGCGCAGTCGCCGCTGCTCCCAGTGTGCAGGGGCTGGA
GCCCCACTGGGACCTTGTGCACGCGTCTTCTTTCCTGTGGGCGCAGTACA
AGCCCAAGGCGGAGTGGTGGGAGATGGTGGAGTGCGCACGCCGCGTAGTC
CTGACGGGCGTCCTTGTGTTCATACTGCCCGGGTCCGCGGGGCAGGCCGC
GGTCTCCGTGCTCTTTGCCTTTCTCCTGACTTTAATTTTCATGGCTGTGC
GGCCCCACCGAGAGCACGCCATGCAGCGGCAATACCTACTGGGTGCAGTG
ATTGTGTATTTCGCGAGCATGAACGCATTGCTAATCAAGTCGCAGGTGTC
CGGCGCTCAATCGCAGCTTGTCGTGGGCATTGTCATGATAATCATCAGCA
CTGCACTCATTGTGGCAGCGGTGGCGCAGACGCTGTATGGCGTTGCCGAC
CTTGTGCGAGGCAGTGAGAGGCAGCCCTCACCCGGTCCGTTGGGCCCGAG
CAATTTCACAGCCGGGCAACCCCGACCTCAGTGCGCATAA

protein sequence of jgi.p|Trimin1|177684

>Trimin1|177684|e_gw1.157.60.1 ID=Trimin1|177684|e_gw1.157.60.1|Name=jgi.p|Trimin1|177684|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=380bp
MNSPNPGLHNCRFSLCSVLPPPQLVAGFLEVTGLQLAPTFENFIHKLAIL
PNLSFAWGCVYNATFYEKLLAMTLGPLVAVALLGCSWLWAVAREHRLRRV
AGADAARAARLKALRKHWTAFLALTFLVYGTVSSIIFQTFACDYMQELDT
YYLRADYSIQCYNNSEYWRYFAYAMTMFVVYPLGVPALYALLLCFKRRQH
QARQGAVAAAPSVQGLEPHWDLVHASSFLWAQYKPKAEWWEMVECARRVV
LTGVLVFILPGSAGQAAVSVLFAFLLTLIFMAVRPHREHAMQRQYLLGAV
IVYFASMNALLIKSQVSGAQSQLVVGIVMIIISTALIVAAVAQTLYGVAD
LVRGSERQPSPGPLGPSNFTAGQPRPQCA*

mRNA from alignment at Contig_157:335944..337353-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_16377 ID=mRNA_16377|Name=jgi.p|Trimin1|177684|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1410bp|location=Sequence derived from alignment at Contig_157:335944..337353- (Tribonema minus UTEX_B_3156 )
ATGAATTCACCTAATCCTGGTCTGCATAATTGCCGGTTTTCATTGTGTTC
CGTGCTCCCGCCACCCCAGCTCGTCGCTGGTTTTCTTGAGGTGACTGGCC
TACAGCTGGCACCAACATTCGAGAACTTCATCCACAAGCTCGCCATACTG
CCCAACCTGAGCTTTGCATGGGGGTGCGTGTACAACGCCACCTTCTACGA
AAAGCTGCTTGCTATGACGCTGGGACCGCTGGTGGCCGTGGCACTGCTCG
GCTGCTCGTGGCTGTGGGCAGTGGCACGCGAGCACAGGCTGCGGCGGGTG
GCAGGTGCGGACGCCGCGCGGGCGGCACGGCTGAAGGCCCTGCGCAAGCA
CTGGACAGCGTTCCTGGCGCTGACCTTTCTGGTCTACGGCACCGTCAGCA
GCATCATCTTCCAGACATTTGCTTGCGACTATATGCAGGAGCTGGACACT
TACTACCTGCGTGCCGATTACTCCATTCAGTGCTACAACAATTCAGAGTA
CTGGCGGTACTTTGCGTATGCCATGACCATGTTCGTGGTGTACCCCCTCG
GTGTCCCTGCGCTGTACGCGCTGTTGCTGTGCTTCAAGCGGCGGCAGCAC
CAGGCGCGGCAAGGCGCAGTCGCCGCTGCTCCCAGTGTGGTGGCAGCCCT
CTCGCAGGGTGACAGTGTGCATGGTGACATGCGTGTCCGCATGCACTACC
CGGCACCACCACGCTGTGATCCCAACCCCACTTGGCGCGTGCTCACCAAG
CAGGTAGGCGCAACTGCAGGAGGGGGTCGGGGACTTCAGCAGGTGTCACA
ATGGGCCGACGACTCTACTCTGCATTGTGCGCCACTTAGCTCGGCTAGTG
CTGACCAGCCTAAGCTCTTGGGTGCAGCAGCAGCTGAGCTCGCCAATGAG
GGGCATCAGCAGGGGCTGGAGCCCCACTGGGACCTTGTGCACGCGTCTTC
TTTCCTGTGGGCGCAGTACAAGCCCAAGGCGGAGTGGTGGGAGATGGTGG
AGTGCGCACGCCGCGTAGTCCTGACGGGCGTCCTTGTGTTCATACTGCCC
GGGTCCGCGGGGCAGGCCGCGGTCTCCGTGCTCTTTGCCTTTCTCCTGAC
TTTAATTTTCATGGCTGTGCGGCCCCACCGAGAGCACGCCATGCAGCGGC
AATACCTACTGGGTGCAGTGATTGTGTATTTCGCGAGCATGAACGCATTG
CTAATCAAGTCGCAGGTGTCCGGCGCTCAATCGCAGCTTGTCGTGGGCAT
TGTCATGATAATCATCAGCACTGCACTCATTGTGGCAGCGGTGGCGCAGA
CGCTGTATGGCGTTGCCGACCTTGTGCGAGGCAGTGAGAGGCAGCCCTCA
CCCGGTCCGTTGGGCCCGAGCAATTTCACAGCCGGGCAACCCCGACCTCA
GTGCGCATAA

Coding sequence (CDS) from alignment at Contig_157:335944..337353-

>mRNA_16377 ID=mRNA_16377|Name=jgi.p|Trimin1|177684|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1140bp|location=Sequence derived from alignment at Contig_157:335944..337353- (Tribonema minus UTEX_B_3156 )
ATGAATTCACCTAATCCTGGTCTGCATAATTGCCGGTTTTCATTGTGTTC
CGTGCTCCCGCCACCCCAGCTCGTCGCTGGTTTTCTTGAGGTGACTGGCC
TACAGCTGGCACCAACATTCGAGAACTTCATCCACAAGCTCGCCATACTG
CCCAACCTGAGCTTTGCATGGGGGTGCGTGTACAACGCCACCTTCTACGA
AAAGCTGCTTGCTATGACGCTGGGACCGCTGGTGGCCGTGGCACTGCTCG
GCTGCTCGTGGCTGTGGGCAGTGGCACGCGAGCACAGGCTGCGGCGGGTG
GCAGGTGCGGACGCCGCGCGGGCGGCACGGCTGAAGGCCCTGCGCAAGCA
CTGGACAGCGTTCCTGGCGCTGACCTTTCTGGTCTACGGCACCGTCAGCA
GCATCATCTTCCAGACATTTGCTTGCGACTATATGCAGGAGCTGGACACT
TACTACCTGCGTGCCGATTACTCCATTCAGTGCTACAACAATTCAGAGTA
CTGGCGGTACTTTGCGTATGCCATGACCATGTTCGTGGTGTACCCCCTCG
GTGTCCCTGCGCTGTACGCGCTGTTGCTGTGCTTCAAGCGGCGGCAGCAC
CAGGCGCGGCAAGGCGCAGTCGCCGCTGCTCCCAGTGTGCAGGGGCTGGA
GCCCCACTGGGACCTTGTGCACGCGTCTTCTTTCCTGTGGGCGCAGTACA
AGCCCAAGGCGGAGTGGTGGGAGATGGTGGAGTGCGCACGCCGCGTAGTC
CTGACGGGCGTCCTTGTGTTCATACTGCCCGGGTCCGCGGGGCAGGCCGC
GGTCTCCGTGCTCTTTGCCTTTCTCCTGACTTTAATTTTCATGGCTGTGC
GGCCCCACCGAGAGCACGCCATGCAGCGGCAATACCTACTGGGTGCAGTG
ATTGTGTATTTCGCGAGCATGAACGCATTGCTAATCAAGTCGCAGGTGTC
CGGCGCTCAATCGCAGCTTGTCGTGGGCATTGTCATGATAATCATCAGCA
CTGCACTCATTGTGGCAGCGGTGGCGCAGACGCTGTATGGCGTTGCCGAC
CTTGTGCGAGGCAGTGAGAGGCAGCCCTCACCCGGTCCGTTGGGCCCGAG
CAATTTCACAGCCGGGCAACCCCGACCTCAGTGCGCATAA