mRNA_16134 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|353142
Unique NamemRNA_16134
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|353142 vs. uniprot
Match: A0A835Z8S8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8S8_9STRA)

HSP 1 Score: 590 bits (1522), Expect = 2.560e-196
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 1
Query:    1 MAQSEEDTAVPHAHKSGGSRKRRRERANSTGEPHNGDSTTVVSPFEEVSLALCISLLPHALSDIFGSIRKNVYKLLMHYNRDVGGVIVALGDIRMADGEHHGRIMEEMPHLHFNIEANAQVFRPRSGALLNGRVMKPPLHAAFSCVYAQVSGTHVSMLVCGIFNASIYAGELEGVGYAYSDARARWERXXXXXXXXXXXXXXXGPDAVEMGTSLDFTVRRLHQAQGLISIEGGLIANGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPRCLPPVRISSCVQDAVYDKLCDPQAFIQARSTEGRGGALSSTGAPSAXXXXXXXXXXKLTTVDESGSCEIAAAGGHLEVLQWLRHINCGWSEAT 1125
            MAQSEEDTAVPHAHKSGGSRKRRRERANSTGEPHNGDSTTVVSPFEEVSLALCISLLPHALSDIFGSIRKNVYKLLMHYNRDVGGVIVALGDIRMADGEHHGRIMEEMPHLHFNIEANAQVFRPRSGALLNGRVMKPPLHAAFSCVYAQVSGTHVSMLVCGIFNASIYAGELEGVGYAYSDARARWERXXXXXXXXXXXXXXXGPDAVEMGTSLDFTVRRLHQAQGLISIEGGLIANGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPRCLPPVRISSCVQDAVYDKLCDPQAFIQARSTEGRGGALSSTGAPSAXXXXXXXXXXKLTTVDESGSCEIAAAGGHLEVLQWLRHINCGWSEAT
Sbjct:    1 MAQSEEDTAVPHAHKSGGSRKRRRERANSTGEPHNGDSTTVVSPFEEVSLALCISLLPHALSDIFGSIRKNVYKLLMHYNRDVGGVIVALGDIRMADGEHHGRIMEEMPHLHFNIEANAQVFRPRSGALLNGRVMKPPLHAAFSCVYAQVSGTHVSMLVCGIFNASIYAGELEGVGYAYSDARARWERXXXXXXXXXXXXXXXGPDAVEMGTSLDFTVRRLHQAQGLISIEGGLIANGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPRCLPPVRISSCVQDAVYDKLCDPQAFIQARSTEGRGGALSSTGAPSAXXXXXXXXXXKLTTVDESGSCEIAAAGGHLEVLQWLRHINCGWSEAT 375          
BLAST of jgi.p|Trimin1|353142 vs. uniprot
Match: A0A6H5JDH5_9PHAE (RPA43_OB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDH5_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 2.270e-41
Identity = 85/192 (44.27%), Postives = 114/192 (59.38%), Query Frame = 1
Query:  127 SPFEEVSLALCISLLPHALSDIFGSIRKNVYKLLMHYNRDVGGVIVALGDIRMADGEHHGRIMEEMPHLHFNIEANAQVFRPRSGALLNGRVMKPPLHAAFSCVYAQVSGTHVSMLVCGIFNASIYAGELEGVGYAYSDARARWERXXXXXXXXXXXXXXXGPDAVEMGTSLDFTVRRLHQAQGLISIEGGL 702
            SPFEEV L +C+SLLP  + DI+  IR+N+Y+ LM YN  +GGV++A+ ++   DG   GRI +EMPH+HF+++A AQVFRPR G +L GRV K             V+ THV MLVCGIFNAS+ A E  G G+ +      W+R                 + + +G    F V R+H+A GLISIEG L
Sbjct:    4 SPFEEVELKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNEALGGVLLAVSNLSFGDGAREGRIEDEMPHIHFDVKAKAQVFRPRPGHVLQGRVNK-------------VTSTHVGMLVCGIFNASV-ASESMGEGFRFDMTAREWQRSRGGKDGAR--------EVIAVGADTQFVVTRMHEAAGLISIEGSL 173          
BLAST of jgi.p|Trimin1|353142 vs. uniprot
Match: A0A4D9D057_9STRA (RPA43_OB domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D057_9STRA)

HSP 1 Score: 105 bits (261), Expect = 3.280e-21
Identity = 63/201 (31.34%), Postives = 102/201 (50.75%), Query Frame = 1
Query:  112 STTVVSPFEEVSLALCISLLPHALSDIFGSIRKNVYKLLMHYNRDVGGVIVALGDIRMADGEHHGRIMEEMPHLHFNIEANAQVFRPRSGALLNGRVMKPPLHAAFSCVYAQVSGTHVSMLVCGIFNASIYAGELEGVGYAYSDARARWERXXXXXXXXXXXXXXXGPDAVEMGTSLDFTVRRLHQAQGLISIEGGLIANG 714
            S  +  PF+E  +   ++LLP A+ ++  SI + ++ +LM YN+DVGG+++ L  +R         +M ++PHLH  +EA + VF P  G  L G V+K             V+ THV++LV  +FNA+I A E     YA+ + R  W                 G + + +G  + F V  +H+A GLI+++G L   G
Sbjct:   25 SPVIQVPFQEQRVLFKLALLPDAMGNLEESIHEKLHDMLMKYNQDVGGILLTLSQVRFPPSRRFASVMGDLPHLHVRVEATSLVFTPEPGMSLTGVVIK-------------VTSTHVALLVYDLFNAAI-AREDMPEAYAFDNDREAW-------------VGTGGKEVLGLGEEVAFRVALVHEAAGLIALDGSLREEG 198          
BLAST of jgi.p|Trimin1|353142 vs. uniprot
Match: A0A7S1XUY3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUY3_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 8.720e-19
Identity = 45/94 (47.87%), Postives = 63/94 (67.02%), Query Frame = 1
Query:  127 SPFEEVSLALCISLLPHALSDIFGSIRKNVYKLLMHYNRDVGGVIVALGDIRMADGEHHGRIMEEMPHLHFNIEANAQVFRPRSGALLNGRVMK 408
            SPFE V+L +C SLLP +L D+ G +R+ +++LLM Y  + GGV+V   +I  A G  HGRI +E PH+HF+I A A VF P++G  L G V +
Sbjct:   34 SPFEVVTLRVCCSLLPSSLGDVPGGVRRQLFRLLMRYLPEAGGVVVGFQNIGFAPGARHGRIHDEEPHIHFDIVARALVFAPQAGLELVGEVQR 127          
BLAST of jgi.p|Trimin1|353142 vs. uniprot
Match: A0A7S3L6X0_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6X0_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 8.540e-18
Identity = 69/208 (33.17%), Postives = 100/208 (48.08%), Query Frame = 1
Query:   79 ANSTGEPHNGDSTTVVSPFEEVS-LALCISLLPHALSDIFGSIRKNVYKLLMHYNRDVGGVIVALGDIR-MADGEHHGRIMEEMPHLHFNIEANAQVFRPRSGALLNGRVMKPPLHAAFSCVYAQVSGTHVSMLVCGIFNASIYAGELEGVGYAYSDARARWERXXXXXXXXXXXXXXXGPDAVEMGTSLDFTVRRLHQAQGLISIEG 696
            A+ST   +  +ST   S    V  L L  S+LP  LSD+  SI + +   L+ Y+  V G I+   ++  +ADG   GRI+EE+PH+H++I  +A VF P   A L GRV              +   +HVSM+V   FNASI A  L   G+ Y   +  W                   D +E  + L F   ++H+A G+ISI+G
Sbjct:   37 ASSTEHVNLNESTETRSNLLSVKKLRLSASILPSGLSDVKTSIDRCIRDFLLKYSDAVDGTIMGYKNVEILADGR--GRIVEELPHIHYDIRCDALVFSPVPNARLRGRV-------------TESFHSHVSMVVFNYFNASISASRLREAGFEYDADKESWYNIE-------------SEDTIEKSSYLVFAAEKIHEAVGMISIDG 216          
BLAST of jgi.p|Trimin1|353142 vs. uniprot
Match: A0A7S4JX32_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JX32_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.740e-17
Identity = 54/192 (28.12%), Postives = 96/192 (50.00%), Query Frame = 1
Query:  127 SPFEEVSLALCISLLPHALSDIFGSIRKNVYKLLMHYNRDVGGVIVALGDIRMADGEHHGRIMEEMPHLHFNIEANAQVFRPRSGALLNGRVMKPPLHAAFSCVYAQVSGTHVSMLVCGIFNASIYAGELEGVGYAYSDARARWERXXXXXXXXXXXXXXXGPDAVEMGTS--LDFTVRRLHQAQGLISIEG 696
            SPF  V +   +SL P +L D+ G++R+   + +  Y   +GGV++A+ D+R+      GR++ E+P++HF++E +A +F P  G  L G V     + +F         +HV +LV G  NAS+ A ++   GY +      W                       +G S  + FT++++H+  G++S+EG
Sbjct:  140 SPFRRVKVRAVVSLSPSSLLDVQGNVRRLSCEDVTRYAGGLGGVLLAVEDVRLLRDGGKGRVVNELPYVHFDVEVSAVIFNPSIGTRLTGEV-----NESFP--------SHVGVLVNGFINASVSADQMREAGYVFDGESNEWRNGNAAYSEDAAVKKEPAAPEEMVGASDRITFTLQKVHECDGIVSMEG 318          
BLAST of jgi.p|Trimin1|353142 vs. uniprot
Match: A0A6V2ITE1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2ITE1_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 3.080e-16
Identity = 56/194 (28.87%), Postives = 94/194 (48.45%), Query Frame = 1
Query:  127 SPFEEVSLALCISLLPHALSDIFGSIRKNVYK-LLMHYNRDVGGVIVALGDIRMADGEHH---GRIMEEMPHLHFNIEANAQVFRPRSGALLNGRVMKPPLHAAFSCVYAQVSGTHVSMLVCGIFNASIYAGELEGVGYAYSDARARWERXXXXXXXXXXXXXXXGPDAVEMGTSLDFTVRRLHQAQGLISIEG 696
            S F    + L +SLLP ALSD+  S+ K +   +L+ +N  + G+++A   +++   +     G IM EMPH+H+N+E NA +F P+ G  L+G             V  ++  +HVS+L+   FNA++ A  L   GY +      W                   + + +   + FTV  LH+  G++S+EG
Sbjct:   98 SAFFNKKIQLVVSLLPSALSDVVQSVTKLISNSMLLRFNDSMDGILLAFDSVKICKTKKKTVGGYIMNEMPHIHYNVEMNALIFSPKIGMRLSG-------------VVNELFPSHVSVLIHSFFNATVSADHLRKAGYTFDADTFEW-----ITERSRGSINGNSSNELSLEDEVSFTVDTLHECAGIMSMEG 273          
BLAST of jgi.p|Trimin1|353142 vs. uniprot
Match: T0RQ13_SAPDV (RPA43_OB domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RQ13_SAPDV)

HSP 1 Score: 85.1 bits (209), Expect = 1.310e-14
Identity = 61/195 (31.28%), Postives = 91/195 (46.67%), Query Frame = 1
Query:  124 VSPFEEVSLALCISLLPHALSDIFGSIRKNVYKLLMHYNRDVGGVIVALGDIRMADGEHHGRIMEEMPHLHFNIEANAQVFRPRSGALLNGRVMKPPLHAAFSCVYAQVSGTHVSMLVCGIFNASIYAGELEGVGYAYSDARARWERXXXXXXXXXXXXXXXGPDAV--EMGTSLDFTVRRLHQAQGLISIEGGL 702
            +SPF    L +  SL P  + D    + + +  +LM Y   V GVI+A   I + +   +G I+ E P++H  + A+A VFRP  G  L             S V  +V   H+ +L+ G+FN SI A E+   GY ++     W                 G D V  E+G  + F V R+HQA G+ISI+G +
Sbjct:   13 MSPFVNAKLVMSCSLAPCHIHDAKKGLEEQLNLMLMKYCDPVEGVILAFNAITLLNP--YGHIINETPYIHVRVAADALVFRPTPGMEL-------------SAVVNKVGSNHIGLLLAGVFNVSIDAAEMPD-GYTHNFHEEAW----------------VGDDGVTIELGAEVAFNVLRVHQAYGVISIDGSM 175          
BLAST of jgi.p|Trimin1|353142 vs. uniprot
Match: A0A7S2UC88_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UC88_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 3.620e-14
Identity = 58/214 (27.10%), Postives = 101/214 (47.20%), Query Frame = 1
Query:   82 NSTGEPHNG----DSTTVVSPFEEVSLALCISLLPHALSDIFGSIRKNVYKLLMHYNRDVGGVIVALGDIRMADGEHHG-----RIMEEMPHLHFNIEANAQVFRPRSGALLNGRVMKPPLHAAFSCVYAQVSGTHVSMLVCGIFNASIYAGELEGVGYAYSDARARWERXXXXXXXXXXXXXXXGPDAVEMGTSLDFTVRRLHQAQGLISIEG 696
            NS G+ H      D T + SPF +  L+L +SL P +L  +   I +++  LL+ ++  V G+++A  ++++   E  G     RI+ EMP +H+ +  +A VF P  G  L G+V     + +F         +H+ MLV   FNA + +  L   GY +      W                    A+ +   ++F++ +LH+  G+IS+EG
Sbjct:   66 NSPGKVHTKEAIRDETGLPSPFTKRQLSLLVSLYPASLGSVSDHICRSIRSLLLKFSDGVDGILLAFDNVKILGREQEGDLGRGRILNEMPQIHYRVLLDALVFCPVVGMKLTGKV-----NESFP--------SHIGMLVHAFFNAMVSSDHLRAAGYIFDRDAQHWTSSVDNT-------------AIGIDDQVEFSLDKLHECAGVISLEG 253          
BLAST of jgi.p|Trimin1|353142 vs. uniprot
Match: A0A1Y1HMN1_KLENI (DNA-dependent RNA polymerase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HMN1_KLENI)

HSP 1 Score: 78.6 bits (192), Expect = 3.370e-12
Identity = 55/193 (28.50%), Postives = 89/193 (46.11%), Query Frame = 1
Query:  139 EVSLALCISLLPHALSDIFGSIRKNVYKLLMHYNRDVGGVIVALGDIRMADGEHHGRIMEEM-PHLHFNIEANAQVFRPRSGALLNGRVMKPPLHAAFSCVYAQVSGTHVSMLVCGIFNASIYAGELEGVGYAYSDARARWERXXXXXXXXXXXXXXXGPDAVEMGTSLDFTVRRLHQAQGLISIEGGLIANG 714
            +V   L I + P    D+  ++R+++  LLM YN + GGV++A  D+ +   +  GRI+  + P++H ++ A   VF P +  +L G V K             V   H+ +L  G FNASI A E+ G  + Y    + W                 G   + +GT +DF V R+H     +S+ G L+  G
Sbjct:   11 QVQAKLRIEMHPSQAEDVKVAVREHLNTLLMRYNEEFGGVVLAYSDVVLLGRK--GRILTTLSPYIHLDLTARLLVFAPAAQNVLAGSVNK-------------VGPAHIGLLALGAFNASIRADEI-GDAFQYDPDASAW---------------VDGSSRIAVGTEVDFAVDRVHDEGNFLSLSGSLLLPG 172          
BLAST of jgi.p|Trimin1|353142 vs. uniprot
Match: A0A835ZAA4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAA4_9STRA)

HSP 1 Score: 541 bits (1394), Expect = 5.850e-186
Identity = 429/429 (100.00%), Postives = 429/429 (100.00%), Query Frame = 1
Query:    1 MAKHKHRKRXXXXXXXXXXXXXXXXEXXXXESDASDRGKARGGEDSLRAENREKIAKRSRMWTTVGSDSEASADGPAAAGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSARASGRPRDAAAIGAPWADSGRGSAAARAQSTPGSRGLPCLKEKDSKKHKKDXXXXXXXXXXXXXXSGGGDXXXXXXXXVPSFSAVNQDQFGKYGILRESDFFKKQQEFEIWMQEQKKVAEAGLLQKWEVKEFFREYMEDYNTATLPHEKYINYAKWEMEEWESEWSSLAXXXXXXXXXXXXXXXXXXXPGLAAQKKRKEAKRLKAGAPVTAGDEAAVALERKREKQLREQQEFDNMIMATMRSNKVQEMRSQELLRAEMQQAYRQGDLDKVRKIEARLAPDEDTTTWK 1287
            MAKHKHRKRXXXXXXXXXXXXXXXXEXXXXESDASDRGKARGGEDSLRAENREKIAKRSRMWTTVGSDSEASADGPAAAGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSARASGRPRDAAAIGAPWADSGRGSAAARAQSTPGSRGLPCLKEKDSKKHKKDXXXXXXXXXXXXXXSGGGDXXXXXXXXVPSFSAVNQDQFGKYGILRESDFFKKQQEFEIWMQEQKKVAEAGLLQKWEVKEFFREYMEDYNTATLPHEKYINYAKWEMEEWESEWSSLAXXXXXXXXXXXXXXXXXXXPGLAAQKKRKEAKRLKAGAPVTAGDEAAVALERKREKQLREQQEFDNMIMATMRSNKVQEMRSQELLRAEMQQAYRQGDLDKVRKIEARLAPDEDTTTWK
Sbjct:    1 MAKHKHRKRXXXXXXXXXXXXXXXXEXXXXESDASDRGKARGGEDSLRAENREKIAKRSRMWTTVGSDSEASADGPAAAGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSARASGRPRDAAAIGAPWADSGRGSAAARAQSTPGSRGLPCLKEKDSKKHKKDXXXXXXXXXXXXXXSGGGDXXXXXXXXVPSFSAVNQDQFGKYGILRESDFFKKQQEFEIWMQEQKKVAEAGLLQKWEVKEFFREYMEDYNTATLPHEKYINYAKWEMEEWESEWSSLAXXXXXXXXXXXXXXXXXXXPGLAAQKKRKEAKRLKAGAPVTAGDEAAVALERKREKQLREQQEFDNMIMATMRSNKVQEMRSQELLRAEMQQAYRQGDLDKVRKIEARLAPDEDTTTWK 429          
BLAST of jgi.p|Trimin1|353142 vs. uniprot
Match: D8LIQ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIQ9_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 3.150e-39
Identity = 86/200 (43.00%), Postives = 127/200 (63.50%), Query Frame = 1
Query:  673 AVNQDQFGKYGILRESDFFKKQQEFEIWMQEQKKVAEAGLLQKWEVKEFFREYMEDYNTATLPHEKYINYAKWEMEEWESEWSSLAXXXXXXXXXXXXXXXXXXXPGLAAQKKRKEAKRLKAGAPVTAG-DEAAVALERKREKQLREQQEFDNMIMATMRSNKVQEMRSQELLRAEMQQAYRQGDLDKVRKIEARLAPDE 1269
            AV+QD +GK G+LRE+D+F KQ+EFE+WM EQKK+ + G + KWE K++FREYMED+NT TLPH+KYI+  KWEM E+                                +KK  EAKR  +G  ++   DE  + L+++R ++    + FDN++ A++  +K + M+SQ+LLRA+MQ AY+ GD++ V++IE RL PDE
Sbjct:    4 AVDQDAYGKNGVLREADYFNKQREFEVWMMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFH-------------------------------RKKASEAKRRASGDALSMREDEMEMNLKKRRAREAANAK-FDNLVKASITGSKRENMQSQDLLRAKMQNAYKHGDMETVKRIEKRLEPDE 171          
BLAST of jgi.p|Trimin1|353142 vs. uniprot
Match: A0A8K1FMQ5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMQ5_PYTOL)

HSP 1 Score: 129 bits (324), Expect = 4.780e-30
Identity = 83/203 (40.89%), Postives = 119/203 (58.62%), Query Frame = 1
Query:  673 AVNQDQFGKYGILRESDFFKKQQEFEIWMQEQKKVAEAGLLQKWEVKEFFREYMEDYNTATLPHEKYINYAKWEMEEWESEWSSLAXXXXXXXXXXXXXXXXXXXPGLAAQKKRKEAKRLKAGAPVTAG----DEAAVALERKREKQLREQQEFDNMIMATMRSNKVQEMRSQELLRAEMQQAYRQGDLDKVRKIEARLAPDE 1269
            AVNQ+++GK+GILRESDF  K Q F+ W+++ KKV E     KWE  E+F+EYMEDYNTAT+PHEKY +  K+EM ++E +                              +K+K  K L+A      G    DE AV  ER+ ++  +EQ+EF  +IM TM  +K++ MR QE LRAEMQ  Y+ G++++ R++E  L  +E
Sbjct:   89 AVNQNEYGKHGILRESDFHTKAQSFQAWLRDIKKVTEFNG-PKWEAMEYFKEYMEDYNTATMPHEKYYDIEKYEMGKYEKD------------------------------QKKKARKHLEAAGSSRGGSEVPDEDAVRRERQAQRAAKEQEEF-RLIMQTMDKDKIEAMRRQEQLRAEMQMHYKAGNVEEARRLEQLLRAEE 259          
BLAST of jgi.p|Trimin1|353142 vs. uniprot
Match: A0A3F2RTC5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RTC5_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.650e-26
Identity = 79/203 (38.92%), Postives = 115/203 (56.65%), Query Frame = 1
Query:  673 AVNQDQFGKYGILRESDFFKKQQEFEIWMQEQKKVAEAGLLQKWEVKEFFREYMEDYNTATLPHEKYINYAKWEMEEWESEWSSLAXXXXXXXXXXXXXXXXXXXPGLAAQKKRKEAKRLKAG--APVTAGDEAAVALERKREKQLREQQEFDNMIMATMRSNKVQEMRSQELLRAEMQQAYRQGDLDKVRKIEARLAP-DED 1272
            AVNQD++GKYGILRESDF  K   F+ W+++ KK+ E     KWE  E F+EYMEDYNT TLPHEKY +  K+EM +++                               Q+++  AK++ A   A     DE  V  ER+  ++ +EQ+EF  +++  M  +K++ MR QE LRA+MQ  Y+ G++D+ R++E  L   DED
Sbjct:   61 AVNQDEYGKYGILRESDFHTKSVSFQAWLRDVKKMGEFNG-PKWEAMELFKEYMEDYNTCTLPHEKYYDVEKYEMRQYQK------------------------------QQRKAIAKQMGASDKALSALADEERVRRERQTAREKKEQEEF-RLVLQLMDKDKIEAMREQEHLRAQMQMHYKSGNVDEARRLEQLLNKVDED 231          
BLAST of jgi.p|Trimin1|353142 vs. uniprot
Match: K3WZ22_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZ22_GLOUD)

HSP 1 Score: 122 bits (307), Expect = 1.700e-26
Identity = 79/201 (39.30%), Postives = 116/201 (57.71%), Query Frame = 1
Query:  673 AVNQDQFGKYGILRESDFFKKQQEFEIWMQEQKKVAEAGLLQKWEVKEFFREYMEDYNTATLPHEKYINYAKWEMEEWESEWSSLAXXXXXXXXXXXXXXXXXXXPGLAAQKKRKEAKRLKAGAPVTA-GDEAAVALERKREKQLREQQEFDNMIMATMRSNKVQEMRSQELLRAEMQQAYRQGDLDKVRKIEARLAPDED 1272
            AVNQ+++GKYGI+RESDF  K   F+ W+++ KKV++     KWE  E F++YMEDYNTATLPHEKY +  K+EM +++                               Q+ +     LKAGA + A  DE  + LER+  +Q +EQ+EF  ++M  M   K++ MR QE LRA+MQ  Y+ G++D+ R++E  L   +D
Sbjct:  234 AVNQNEYGKYGIIRESDFHTKSVSFQAWLRDVKKVSDFSG-PKWEAMELFKDYMEDYNTATLPHEKYYDIEKYEMMQYKK------------------------------QQLKASRNLLKAGAKLDAVADEERLRLERQEARQKKEQEEF-RLVMQLMDKEKIENMRHQEQLRAQMQMHYKAGNVDEARRLEQILNKVDD 402          
BLAST of jgi.p|Trimin1|353142 vs. uniprot
Match: A0A6G0WMF7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WMF7_9STRA)

HSP 1 Score: 117 bits (293), Expect = 2.720e-26
Identity = 76/200 (38.00%), Postives = 114/200 (57.00%), Query Frame = 1
Query:  673 AVNQDQFGKYGILRESDFFKKQQEFEIWMQEQKKVAEAGLLQKWEVKEFFREYMEDYNTATLPHEKYINYAKWEMEEWESEWSSLAXXXXXXXXXXXXXXXXXXXPGLAAQKKRKEAKRLKAGAPVTAGDEAAVALERKREKQLREQQEFDNMIMATMRSNKVQEMRSQELLRAEMQQAYRQGDLDKVRKIEARLAPDED 1272
            AV+Q+++GKYGI+RESDF  K   F +W++E KK+++     KW+  E FREYMEDYNTAT+PHEKY +   +EM+++                                   +K +K+ K+GA     DE +V  E +R+K   E++EFD ++M TM   K+QEMR Q+ LR +MQ  Y+ G++ + R++E  L   ED
Sbjct:   49 AVDQNEYGKYGIIRESDFHTKSVSFNVWVREVKKMSDFNG-PKWQAMELFREYMEDYNTATMPHEKYYDVEAYEMKKYN----------------------------------KKHSKKRKSGA---VNDEESVRREWQRQKLEEEKKEFD-LVMQTMNKEKIQEMRHQQQLRTQMQLYYKSGNVTEARRLEQLLNKVED 209          
BLAST of jgi.p|Trimin1|353142 vs. uniprot
Match: A0A7S1U4G1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4G1_9STRA)

HSP 1 Score: 117 bits (292), Expect = 2.800e-26
Identity = 76/200 (38.00%), Postives = 112/200 (56.00%), Query Frame = 1
Query:  670 SAVNQDQFGKYGILRESDFFKKQQEFEIWMQEQKKVAEAGLLQKWEVKEFFREYMEDYNTATLPHEKYINYAKWEMEEWESEWSSLAXXXXXXXXXXXXXXXXXXXPGLAAQKKRKEAKRLKAGAPVTAGDEAAVALERKREKQLREQQEFDNMIMATMRSNKVQEMRSQELLRAEMQQAYRQGDLDKVRKIEARLAPDE 1269
            +AVNQD++G  GILRE+D+F+KQ+EFE W+ E KK       ++ E  E F E+ ED+NT TLPHEKY +   WEM E+                                +K+   A   ++GA     +E   A+  +RE + R+Q+ +++M+   +  +KV EMR Q+LLRAE Q A++ GDL K RK+EAR+ PD+
Sbjct:   41 AAVNQDEYGARGILREADYFRKQREFEAWVAEVKKAPGYSGSRR-ETMELFAEFAEDFNTVTLPHEKYYDLEAWEMAEY--------------------------------RKREAAAAEARSGATSLQLEEEE-AMRSRREAEERKQRSYNDMVRQMLNKDKVDEMRHQQLLRAEAQIAFKSGDLAKARKLEARMKPDK 206          
BLAST of jgi.p|Trimin1|353142 vs. uniprot
Match: A0A024TMH4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TMH4_9STRA)

HSP 1 Score: 117 bits (294), Expect = 4.620e-26
Identity = 79/200 (39.50%), Postives = 110/200 (55.00%), Query Frame = 1
Query:  673 AVNQDQFGKYGILRESDFFKKQQEFEIWMQEQKKVAEAGLLQKWEVKEFFREYMEDYNTATLPHEKYINYAKWEMEEWESEWSSLAXXXXXXXXXXXXXXXXXXXPGLAAQKKRKEAKRLKAGAPVTAGDEAAVALERKREKQLREQQEFDNMIMATMRSNKVQEMRSQELLRAEMQQAYRQGDLDKVRKIEARLAPDED 1272
            A++Q  +GKYGILRESDF  K   F +W++E KK+++     KWE  E F+EYMEDYNTATLPHEKY +  K+EM                                   Q ++KE KR K GA     DE A+  ER R++   E ++F ++IM TM   K++ MR QE LR +MQ  Y+ G++ + R++EA L   +D
Sbjct:   84 AIDQSDYGKYGILRESDFHAKAVSFNVWLREVKKISDFNG-PKWEAMELFKEYMEDYNTATLPHEKYYDVEKYEMR----------------------------------QHRKKEGKR-KGGATNAHDDEEAMRRERLRQRVEEENKDF-SLIMQTMSKEKIENMRYQEKLRTQMQLHYKSGNVTEARRLEALLNKVDD 246          
BLAST of jgi.p|Trimin1|353142 vs. uniprot
Match: D0NJ58_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NJ58_PHYIT)

HSP 1 Score: 116 bits (291), Expect = 1.810e-25
Identity = 77/207 (37.20%), Postives = 114/207 (55.07%), Query Frame = 1
Query:  673 AVNQDQFGKYGILRESDFFKKQQEFEIWMQEQKKVAEAGLLQKWEVKEFFREYMEDYNTATLPHEKYINYAKWEMEEWESEWSSLAXXXXXXXXXXXXXXXXXXXPGLAAQKKRKEAKRLKAG--APVTAGDEAAVALERKREKQLREQQEFDNMIMATMRSNKVQEMRSQELLRAEMQQAYRQGDLDKVRKIEARLAPDEDTTTWK 1287
            AVNQD++GKYGILRESDF  K   F+ W+++ KK+ E     KWE  E F+EYMEDYNT TLPHEKY +  K+EM+ ++                               Q+++  AK+  A   A  T  DE  V  ER   +  +EQ+EF  +++  M  +K++ MR QE LR++MQ  Y+ G++++ R++E  L   E+   +K
Sbjct:   97 AVNQDEYGKYGILRESDFHNKSVSFQAWVRDVKKMGEFNG-PKWEAMELFKEYMEDYNTCTLPHEKYYDIEKYEMKRYQK------------------------------QQRKAHAKQKSASDEALDTLADEERVRRERLAARDKKEQEEF-RLVLQLMDKDKIEAMREQERLRSQMQMFYKSGNVEEARRLEQILNKVEEDPRFK 271          
BLAST of jgi.p|Trimin1|353142 vs. uniprot
Match: G4Z1P5_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z1P5_PHYSP)

HSP 1 Score: 118 bits (295), Expect = 2.450e-25
Identity = 80/201 (39.80%), Postives = 113/201 (56.22%), Query Frame = 1
Query:  673 AVNQDQFGKYGILRESDFFKKQQEFEIWMQEQKKVAEAGLLQKWEVKEFFREYMEDYNTATLPHEKYINYAKWEMEEWESEWSSLAXXXXXXXXXXXXXXXXXXXPGLAAQKKRKEAKRLKAGAPVTAGDEAAVALERKREKQLREQQEFDNMIMATMRSNKVQEMRSQELLRAEMQQAYRQGDLDKVRKIEARLAP-DED 1272
            AVNQD++GKYGILRESDF  K   F+ W+++ KK+ E     KWE  E F+EYMEDYNT TLPHEKY +  K+EM+ ++ +                            A  K+K A     GA     DE  V  ER+  ++ +EQ+EF  +++  M  +K++ MR QE LRA+MQ  Y+ G++D+ R++E  L   DED
Sbjct:  173 AVNQDEYGKYGILRESDFHSKSVSFQAWLRDVKKMGEFNG-PKWEAMELFKEYMEDYNTCTLPHEKYYDIEKYEMKRYQKQQRK-------------------------AYAKQKGASDKALGALA---DEERVRRERQAAREKKEQEEF-RLVLQLMDKDKIEAMREQERLRAQMQLHYKSGNVDEARRLEQILNKVDED 343          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353142 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A835Z8S8_9STRA2.560e-196100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JDH5_9PHAE2.270e-4144.27RPA43_OB domain-containing protein n=2 Tax=Ectocar... [more]
A0A4D9D057_9STRA3.280e-2131.34RPA43_OB domain-containing protein n=2 Tax=Monodop... [more]
A0A7S1XUY3_9STRA8.720e-1947.87Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S3L6X0_9STRA8.540e-1833.17Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S4JX32_9STRA1.740e-1728.13Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A6V2ITE1_9STRA3.080e-1628.87Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
T0RQ13_SAPDV1.310e-1431.28RPA43_OB domain-containing protein n=2 Tax=Saprole... [more]
A0A7S2UC88_9STRA3.620e-1427.10Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A1Y1HMN1_KLENI3.370e-1228.50DNA-dependent RNA polymerase n=1 Tax=Klebsormidium... [more]

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BLAST of jgi.p|Trimin1|353142 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZAA4_9STRA5.850e-186100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LIQ9_ECTSI3.150e-3943.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8K1FMQ5_PYTOL4.780e-3040.89Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3F2RTC5_9STRA1.650e-2638.92Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
K3WZ22_GLOUD1.700e-2639.30Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A6G0WMF7_9STRA2.720e-2638.00Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A7S1U4G1_9STRA2.800e-2638.00Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A024TMH4_9STRA4.620e-2639.50Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
D0NJ58_PHYIT1.810e-2537.20Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
G4Z1P5_PHYSP2.450e-2539.80Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_146contigContig_146:77053..82237 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|353142|estExt_Genemark1.C_Ctg_1460009
BRITEbr01611,ko00000,ko00001,ko00002,ko03012,ko03021,ko04147
KEGG rclassRC02795
KEGG ReactionR00435,R00441,R00442,R00443
KEGG ModuleM00182
KEGG Pathwayko00230,ko00240,ko01100,ko03020,ko04152,ko04921,map00230,map00240,map01100,map03020,map04152,map04921
KEGG koko:K03004,ko:K03234
GOsGO:0000428,GO:0001054,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005736,GO:0006139,GO:0006351,GO:0006352,GO:0006353,GO:0006360,GO:0006361,GO:0006363,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009303,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0016070,GO:0016072,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019222,GO:0019438,GO:0030880,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0034062,GO:0034097,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0040029,GO:0042221,GO:0042790,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0045815,GO:0046483,GO:0048518,GO:0050789,GO:0050896,GO:0051716,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0070887,GO:0071310,GO:0071345,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234,GO:1990823,GO:1990830
Preferred nameTWISTNB
Descriptiontranscription by RNA polymerase I
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsKOG4134@1|root,KOG4134@2759|Eukaryota
Evalue2.88e-43
Seed ortholog2880.D7FQC3
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRNA polymerase Rpb7, N-terminal
Ec32 orthologEc-01_006640.1
TranscriptId353464
TrackFilteredModels1
ProteinId353142
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353142gene_16134Tribonema minus UTEX_B_3156 geneContig_146 77053..82237 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353142Trimin1|353142|estExt_Genemark1.C_Ctg_1460009Tribonema minus UTEX_B_3156 polypeptideContig_146 77053..82237 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_16134_1exon_16134_1Tribonema minus UTEX_B_3156 exonContig_146 77053..77460 +
exon_16134_2exon_16134_2Tribonema minus UTEX_B_3156 exonContig_146 78529..78960 +
exon_16134_3exon_16134_3Tribonema minus UTEX_B_3156 exonContig_146 79532..79636 +
exon_16134_4exon_16134_4Tribonema minus UTEX_B_3156 exonContig_146 79775..79836 +
exon_16134_5exon_16134_5Tribonema minus UTEX_B_3156 exonContig_146 80135..80165 +
exon_16134_6exon_16134_6Tribonema minus UTEX_B_3156 exonContig_146 80738..82237 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_16134CDS_16134Tribonema minus UTEX_B_3156 CDSContig_146 77053..77460 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_16134 ID=mRNA_16134|Name=jgi.p|Trimin1|353142|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2538bp|location=Sequence derived from alignment at Contig_146:77053..82237+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGCAGAGCGAAGAAGACACGGCAGTGCCACATGCGCACAAGAGTGG
CGGTAGCAGAAAACGGCGACGAGAGAGAGCCAATTCTACAGGCGAGCCAC
ACAATGGCGACTCCACGACAGTGGTATCACCCTTTGAGGAAGTGTCGCTG
GCGCTGTGCATCAGCCTGCTGCCACACGCCCTCAGCGACATCTTCGGCTC
CATAAGAAAGAACGTCTACAAGCTGCTGATGCACTACAATCGCGACGTTG
GCGGGGTTATAGTGGCGCTGGGCGATATAAGGATGGCAGATGGGGAGCAC
CATGGGCGTATCATGGAGGAAATGCCTCACTTGCATTTCAACATAGAGGC
TAATGCTCAAGTTTTCAGGCCACGGTCGGGGGCGTTGCTCAACGGTCGCG
TCATGAAGCCGCCGCTGCACGCCGCGTTCTCGTGTGTCTACGCTCAGGTC
TCCGGCACGCACGTGAGCATGCTCGTGTGCGGCATCTTCAACGCGTCCAT
CTACGCGGGCGAGCTTGAGGGCGTGGGCTATGCGTACAGCGACGCGCGCG
CGCGCTGGGAGCGCAGATCACGCGACGGCGACGGCGGCAGCGGCGGCGGC
GGCAGCGGCGGTCCGGACGCGGTGGAAATGGGCACGTCACTGGACTTCAC
CGTGCGGCGCCTGCACCAGGCGCAGGGCCTCATCTCCATAGAGGGGGGGC
TGATTGCCAATGGCGGCGGCGGCGGTGGCGGCGGCGGCGCGAAAGCTGCC
GCAGCGGACGCGCTCGCAGAAGAGGACGGCGCGGCGGCGGAGAACGGCGA
CGGCGGCGAGCCGCACCGCAAAAAGAAGAAGAAACGGCGCCCGCGCTGCC
TGCCACCTGTGCGCATCAGCAGCTGTGTGCAGGACGCTGTGTACGACAAG
CTGTGCGATCCGCAGGCCTTCATACAGGCGCGGAGCACTGAAGGCCGCGG
CGGCGCTCTCAGCAGCACCGGCGCGCCTTCGGCGGCAGCGGCGCTGCTGT
GCGGCGGTGGCGGCAAACTTACAACCGTGGACGAGTCGGGATCATGCGAG
ATTGCAGCGGCGGGCGGGCACCTCGAGGTGCTGCAGTGGCTGCGCCACAT
TAACTGCGGCTGGAGCGAGGCCACGTGCATCGCCGCCGCCAGGGCTGGAC
ACCTCGACGTCCTGCAGTGGGCACACGCCAACGGCTGCCCCTGGGGCACG
GACACGTGCACGGCTGCGGCGAAGTGCGGAGACCTCGAGGTGCTGCAGTT
CGCGCGCGCCGCCGGCTGCCCCTGGGACCGCTGGGTGTGCACCAGTGCGG
CGGACCTGGGGCACCTGGAGGTGCTGCGGTGGGCGCGCGCAAACGGCTGC
CCCTGGGATGCTCAAAGCGCGTGCTCCAACGCCGCGGTTCTCGGGCGCCT
CGACGTGCTGCAGTTCGCGCACGCGGACGGGCAGCCGTGGGACGAGAGGA
CGTGCAGGTATGCGGCGCTGCACAATCACCTCGAGCTGCTGCAGTGGGCG
CACGCCAACGGCTGCCCCTGGGACGCGCGCACGTGCGGCATAGCTGCGGA
GAAGGGGCACTTTGAAGTGCTGCAGTGGGCGCACGCCAACGGCTGCCCCT
GGGATGACCGCACCAGCCAACCCCTTACGGAGGGGGGGCCCCTTGACATG
CTGCAATGGGCGCAGCGCCATGGCTGCCCCATGCCCGCCGACACCTGCAT
CCTCGCAGTGACGCGGGGAGATCTGCGCATGCTGCAGTGGGCGCGCTCCG
TCGGCTGTCCCTGGGACGCAAAGGTCTGCGCAGTCGCTGCGCAAAGCTGC
CTCTTTCCGATTCTGCAGTGGGCGCACGCTAACGGCTGCCCCAGGGACGA
ACGGACGTGCAGCGGCGCTGCCAAATACGGCGACCTGCGTATGCTGCAGT
GGGCGCAGCGCCGTGGCTGTCCCACGCCCGCTGACGCCTGCAGCATTGCG
GTATCGCGCAATGACCTGCGCATGCTGCAGTGGGCGCGCTCCATCGGCTG
TCCTTGGGACGCAGAGGTTTGCGCTTCCGCCGCGAAACTCGGGATCTTGA
GGATTCTGCGGTGGGCGCACGCTAACGGGTGCCCCTGGGACGAACGGACG
TGCAGCCGTGCTGCCGAAAACGGCGACCTGCGCATGCTGCAGTGGGCGTG
GGAGCACTGGAGCCCCTGGGACGAGCGGACGTGCAGCCACGCCGCCGAAA
ACGGCGATCTTCGCATGTTGCAGTGGGCGTGGGAGCACAGGTGCCCCTGG
GACGAATGGACGTGCAGCCACGCCGCCAAAAACGGCGATCTACGCATGCT
GCGGTGGGCGCGGGAGCGCGGGTGCCCCTGGGAAGAGCGCACGTGCATCA
ACGCTGCGAGCGGCGGGCACCTACGCGTGCTGCAGTGGGCGCGCGCGAAT
GGGTGCCCGTGGAATTGCTACGTCATTGCGTGCGCGGACTATGAGCACCA
CCAGCACGTGGTCGAGTGGGCGCGCGCCAACGGCTGCCCCGAGCGCCCTG
AGGCGGTTTCGTCGGGGAGCGAAGGCGGCTACTACTAG
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protein sequence of jgi.p|Trimin1|353142

>Trimin1|353142|estExt_Genemark1.C_Ctg_1460009 ID=Trimin1|353142|estExt_Genemark1.C_Ctg_1460009|Name=jgi.p|Trimin1|353142|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=846bp
MAQSEEDTAVPHAHKSGGSRKRRRERANSTGEPHNGDSTTVVSPFEEVSL
ALCISLLPHALSDIFGSIRKNVYKLLMHYNRDVGGVIVALGDIRMADGEH
HGRIMEEMPHLHFNIEANAQVFRPRSGALLNGRVMKPPLHAAFSCVYAQV
SGTHVSMLVCGIFNASIYAGELEGVGYAYSDARARWERRSRDGDGGSGGG
GSGGPDAVEMGTSLDFTVRRLHQAQGLISIEGGLIANGGGGGGGGGAKAA
AADALAEEDGAAAENGDGGEPHRKKKKKRRPRCLPPVRISSCVQDAVYDK
LCDPQAFIQARSTEGRGGALSSTGAPSAAAALLCGGGGKLTTVDESGSCE
IAAAGGHLEVLQWLRHINCGWSEATCIAAARAGHLDVLQWAHANGCPWGT
DTCTAAAKCGDLEVLQFARAAGCPWDRWVCTSAADLGHLEVLRWARANGC
PWDAQSACSNAAVLGRLDVLQFAHADGQPWDERTCRYAALHNHLELLQWA
HANGCPWDARTCGIAAEKGHFEVLQWAHANGCPWDDRTSQPLTEGGPLDM
LQWAQRHGCPMPADTCILAVTRGDLRMLQWARSVGCPWDAKVCAVAAQSC
LFPILQWAHANGCPRDERTCSGAAKYGDLRMLQWAQRRGCPTPADACSIA
VSRNDLRMLQWARSIGCPWDAEVCASAAKLGILRILRWAHANGCPWDERT
CSRAAENGDLRMLQWAWEHWSPWDERTCSHAAENGDLRMLQWAWEHRCPW
DEWTCSHAAKNGDLRMLRWARERGCPWEERTCINAASGGHLRVLQWARAN
GCPWNCYVIACADYEHHQHVVEWARANGCPERPEAVSSGSEGGYY*
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mRNA from alignment at Contig_146:77053..82237+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_16134 ID=mRNA_16134|Name=jgi.p|Trimin1|353142|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5185bp|location=Sequence derived from alignment at Contig_146:77053..82237+ (Tribonema minus UTEX_B_3156 )
ATGGCGCAGAGCGAAGAAGACACGGCAGTGCCACATGCGCACAAGAGTGG CGGTAGCAGAAAACGGCGACGAGAGAGAGCCAATTCTACAGGCGAGCCAC ACAATGGCGACTCCACGACAGTGGTATCACCCTTTGAGGAAGTGTCGCTG GCGCTGTGCATCAGCCTGCTGCCACACGCCCTCAGCGACATCTTCGGCTC CATAAGAAAGAACGTCTACAAGCTGCTGATGCACTACAATCGCGACGTTG GCGGGGTTATAGTGGCGCTGGGCGATATAAGGATGGCAGATGGGGAGCAC CATGGGCGTATCATGGAGGAAATGCCTCACTTGCATTTCAACATAGAGGC TAATGCTCAAGTTTTCAGGCCACGGTCGGGGGCGTTGCTCAACGGTCGCG TCATGAAGGTGAGGCTCACCAGCAGCATCATGGTGTTTGCATGTGCTTCA AACCAGGCACAGCAATCTTCAGAGCTGGCAGCGGCGTTCAGATATGTATT AATGGCGCTTGATCTATTTGATACTCGGTATTTTCTTCCAACTTCAACTG CAACACAGATTGAAGAAACTCACGCAACAAGGTGCTGCTGAGTTATTTGA GCTTGCGCCGACACTGTCTCACCACTTGGGCACTACTGTCTCACCACGAT AGTGCCCAATCAATGACAGTGGCACCTTGTCACGACGGCAGCAGTCCTGT CAGGCCAGGTTGCGTTCGCATGCACGCGGTGCTATGGTAGTTCATGCAAC TAGAGCATGCATTTCATGCGATGGTGTGACACTACTGTGCTGGAGGTCTT CACCATTGATGCTGAAGTAACCCTTTACACATCAAAGCACTGAACGCATT GGCAATTTCATCAAGCTTTGACAGAATGTGCGCACACTCCGTGACCGCAA TTAGCAGCGCCGGTCACCCTGGTCTGTGCACAGGCTCGCTGAGAGTTGCA TGGACTCAATGATGCGGCAGAGAAACATGCACTGATTCGTGTACTAGTGA ATTACACTAACCAGTGCACCCTGGCTTCCATACTTGTTGCTGCACCATCC GCGTTGAGCTGCGTGTATCCTTGTGTCAATGTTTTTTTTTTTTTTTTTTT ACATCTGATAGACCCTGCCGTCGCTTGCGCCACGCGTGCGGCTGACGTCT CCGGCGTGATGATGTGCACATGTGTACCACGTGCTCTCAAATCGACAACT ATGAAAGCCATTCGTCAGCACTGCCCCTTTGCCTTTGTCCACGCAGCAAG TCCCCTGAACCGCGTGACTTGGAGCGCCATGCTTGTGATGTGCAGTCCAC GCTGACGATGCCAAATCATTCTACCGACGCGCGCGCTCCTGCGCCACGGC ACCCCCAGAAGCCCTCAAATTCACCTTGAAATCAATTGACCACAAAAACG AGCCGCGTCGGAGCTTTCTCTTTTGTTGCGCCGGCGCATTCATTGGCACA CGCGCCGCCGCCGCCGCCGCGCTGAGCCGCCGCTGCACGCCGCGTTCTCG TGTGTCTACGCTCAGGTCTCCGGCACGCACGTGAGCATGCTCGTGTGCGG CATCTTCAACGCGTCCATCTACGCGGGCGAGCTTGAGGGCGTGGGCTATG CGTACAGCGACGCGCGCGCGCGCTGGGAGCGCAGATCACGCGACGGCGAC GGCGGCAGCGGCGGCGGCGGCAGCGGCGGTCCGGACGCGGTGGAAATGGG CACGTCACTGGACTTCACCGTGCGGCGCCTGCACCAGGCGCAGGGCCTCA TCTCCATAGAGGGGGGGCTGATTGCCAATGGCGGCGGCGGCGGTGGCGGC GGCGGCGCGAAAGCTGCCGCAGCGGACGCGCTCGCAGAAGAGGACGGCGC GGCGGCGGAGAACGGCGACGGCGGCGAGCCGCACCGCAAAAAGAAGAAGA AACGGCGCGTCACCATGGCGTGACGTGACTTCGTTATTGTCTGTAGCCGT TCGTCGCTGTGGCGTGACGCGACCCCGTTCTTGTTGCCGCTGGTTCCGTA ATCATCACATCACTTGTCATCAGCAGGTTTGCGAGTGTGTGAGCAGCGAC TGCTGATGTGTTTGCAAAAGCGCCGTTCGCAGTGCGACTGGGCGAGTTTT TGGGCTTGGTGTCTGTATGCCACCTGCGCAGCAGCGTTTGTGTGCGACTT GCGGAGCTGTGGTCGCGTTCGTCTGCGCAAGACTCCCGTTGACATGATGG TCACTGGTACCTACAGCGTGGACTGACAACAACTGATCTGGCAGTTCACG TGCATGCATGCGTCACTGCTTGTACATGAACTGCATGCAACCCATTTGAC GCTATGCGAATGACTGAATTCAAACAGCTCATCTATCATCCGGAAGCGTT TTTGAAAATAATATGAACAAGATGCTCTGCAGCAGCGCCCCACTCGAGTT GGCACGTGCTCTATCAATGGTATCGTGAAGCTTGTCCCGAGCTTTGTGTG CGGGCTGCGCACCGCGCTGCCTCGCGCAGCCGCGCTGCCTGCCACCTGTG CGCATCAGCAGCTGTGTGCAGGACGCTGTGTACGACAAGCTGTGCGATCC GCAGGCCTTCATACAGGCGCGGAGCACTGAAGGCGTACGGTGGCTGGCAC GCTATCTGCTGCTTGTGGTGCCTTGGGAGAAGTGTGAGCAATGCCGTTGC TGCTCTCGCTGGGCCTGCCACCGTCACATTGTGCCGCTGCGCGACCACTG CGACACGTGCGCCGCATGTGAGCGCGGCGGCGCTCTCAGCAGCACCGGCG CGCCTTCGGCGGCAGCGGCGCTGCTGTGCGGCGGGTATGGGCTAGTGGGG TATTGTAGCTTATGCAGCATTCAAGAAAGTGACAAATGGCCATGCACGAG GTCCTGGCAGCCAACAGCAGAGTGGAGTGAAATTGACAGCAGCTGGAAAA CGGCGCCCTGCCCCAGGGAAAAACGGCTGAGCACTGATCGTAGCCTCTGA GCACTGTGACCGGCAGCAGTCCTTTTCGTTCGCAGATAGCGTCGCATTCG TCCGAAACCCTGTTTAATTGCGCTGGGAAGCCAGGGCAACGACCTGCTGT GGTACAGCACTGCTGCTCGGTGGCCGCTGCAGTGGCGGCAAACTTACAAC CGTGGACGAGTCGGTGAACGAGTCTCTCCAAAAAAACTGTTGACCAAAAA GGTGCAGCAGCGCTAGGCGGGTGGCGGGAGTTCTTATCCGTGCGTTCCAT TGAGTCGCCAGGTGAATCCGATGTCTGACTCTTGCGGCAAGAAGGAGCAG AGGCGAGCGATGGCAGAGGCCAGAGAGTCTGGAAGAGACGCATCCAGGAT CAGGCTCGCAGCTGCTGAGCACGAGCACGCGATCTTGAGCGTTGCGCCGT TCGTTCTCGCCTTCCTTCCTCCGTCTCTGATGACCAGGAGCACGTGCAGC GCTTTCAATGCTGAGGTCGAGAGGCTCAAAGCCCCACGAAAGTACCAGAC AGTGGCGGCAGATGCAGTGGGAAGCGCCAGCCTTGTCCGTTGGGCCGTGA AAAACGGCATGCACCCGTTTATGGCACACTTCTCATGCATCCGCTGCGGC GACCTCGACGGACTGGTGTGCCTTCGTAGCGTGCACCCCATGTCGCTTTC AGCAGAGCACGCGAATCTTGCTGTCAGGTGCGGGCACTTGCAGCTACTGC AGTGGCTTGCACAGAATGGTTGTGCACCGGGCGAGGGATCATGCGAGATT GCAGCGGCGGGCGGGCACCTCGAGGTGCTGCAGTGGCTGCGCCACATTAA CTGCGGCTGGAGCGAGGCCACGTGCATCGCCGCCGCCAGGGCTGGACACC TCGACGTCCTGCAGTGGGCACACGCCAACGGCTGCCCCTGGGGCACGGAC ACGTGCACGGCTGCGGCGAAGTGCGGAGACCTCGAGGTGCTGCAGTTCGC GCGCGCCGCCGGCTGCCCCTGGGACCGCTGGGTGTGCACCAGTGCGGCGG ACCTGGGGCACCTGGAGGTGCTGCGGTGGGCGCGCGCAAACGGCTGCCCC TGGGATGCTCAAAGCGCGTGCTCCAACGCCGCGGTTCTCGGGCGCCTCGA CGTGCTGCAGTTCGCGCACGCGGACGGGCAGCCGTGGGACGAGAGGACGT GCAGGTATGCGGCGCTGCACAATCACCTCGAGCTGCTGCAGTGGGCGCAC GCCAACGGCTGCCCCTGGGACGCGCGCACGTGCGGCATAGCTGCGGAGAA GGGGCACTTTGAAGTGCTGCAGTGGGCGCACGCCAACGGCTGCCCCTGGG ATGACCGCACCAGCCAACCCCTTACGGAGGGGGGGCCCCTTGACATGCTG CAATGGGCGCAGCGCCATGGCTGCCCCATGCCCGCCGACACCTGCATCCT CGCAGTGACGCGGGGAGATCTGCGCATGCTGCAGTGGGCGCGCTCCGTCG GCTGTCCCTGGGACGCAAAGGTCTGCGCAGTCGCTGCGCAAAGCTGCCTC TTTCCGATTCTGCAGTGGGCGCACGCTAACGGCTGCCCCAGGGACGAACG GACGTGCAGCGGCGCTGCCAAATACGGCGACCTGCGTATGCTGCAGTGGG CGCAGCGCCGTGGCTGTCCCACGCCCGCTGACGCCTGCAGCATTGCGGTA TCGCGCAATGACCTGCGCATGCTGCAGTGGGCGCGCTCCATCGGCTGTCC TTGGGACGCAGAGGTTTGCGCTTCCGCCGCGAAACTCGGGATCTTGAGGA TTCTGCGGTGGGCGCACGCTAACGGGTGCCCCTGGGACGAACGGACGTGC AGCCGTGCTGCCGAAAACGGCGACCTGCGCATGCTGCAGTGGGCGTGGGA GCACTGGAGCCCCTGGGACGAGCGGACGTGCAGCCACGCCGCCGAAAACG GCGATCTTCGCATGTTGCAGTGGGCGTGGGAGCACAGGTGCCCCTGGGAC GAATGGACGTGCAGCCACGCCGCCAAAAACGGCGATCTACGCATGCTGCG GTGGGCGCGGGAGCGCGGGTGCCCCTGGGAAGAGCGCACGTGCATCAACG CTGCGAGCGGCGGGCACCTACGCGTGCTGCAGTGGGCGCGCGCGAATGGG TGCCCGTGGAATTGCTACGTCATTGCGTGCGCGGACTATGAGCACCACCA GCACGTGGTCGAGTGGGCGCGCGCCAACGGCTGCCCCGAGCGCCCTGAGG CGGTTTCGTCGGGGAGCGAAGGCGGCTACTACTAG
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Coding sequence (CDS) from alignment at Contig_146:77053..82237+

>mRNA_16134 ID=mRNA_16134|Name=jgi.p|Trimin1|353142|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2538bp|location=Sequence derived from alignment at Contig_146:77053..82237+ (Tribonema minus UTEX_B_3156 )
ATGGCGCAGAGCGAAGAAGACACGGCAGTGCCACATGCGCACAAGAGTGG
CGGTAGCAGAAAACGGCGACGAGAGAGAGCCAATTCTACAGGCGAGCCAC
ACAATGGCGACTCCACGACAGTGGTATCACCCTTTGAGGAAGTGTCGCTG
GCGCTGTGCATCAGCCTGCTGCCACACGCCCTCAGCGACATCTTCGGCTC
CATAAGAAAGAACGTCTACAAGCTGCTGATGCACTACAATCGCGACGTTG
GCGGGGTTATAGTGGCGCTGGGCGATATAAGGATGGCAGATGGGGAGCAC
CATGGGCGTATCATGGAGGAAATGCCTCACTTGCATTTCAACATAGAGGC
TAATGCTCAAGTTTTCAGGCCACGGTCGGGGGCGTTGCTCAACGGTCGCG
TCATGAAGCCGCCGCTGCACGCCGCGTTCTCGTGTGTCTACGCTCAGGTC
TCCGGCACGCACGTGAGCATGCTCGTGTGCGGCATCTTCAACGCGTCCAT
CTACGCGGGCGAGCTTGAGGGCGTGGGCTATGCGTACAGCGACGCGCGCG
CGCGCTGGGAGCGCAGATCACGCGACGGCGACGGCGGCAGCGGCGGCGGC
GGCAGCGGCGGTCCGGACGCGGTGGAAATGGGCACGTCACTGGACTTCAC
CGTGCGGCGCCTGCACCAGGCGCAGGGCCTCATCTCCATAGAGGGGGGGC
TGATTGCCAATGGCGGCGGCGGCGGTGGCGGCGGCGGCGCGAAAGCTGCC
GCAGCGGACGCGCTCGCAGAAGAGGACGGCGCGGCGGCGGAGAACGGCGA
CGGCGGCGAGCCGCACCGCAAAAAGAAGAAGAAACGGCGCCCGCGCTGCC
TGCCACCTGTGCGCATCAGCAGCTGTGTGCAGGACGCTGTGTACGACAAG
CTGTGCGATCCGCAGGCCTTCATACAGGCGCGGAGCACTGAAGGCCGCGG
CGGCGCTCTCAGCAGCACCGGCGCGCCTTCGGCGGCAGCGGCGCTGCTGT
GCGGCGGTGGCGGCAAACTTACAACCGTGGACGAGTCGGGATCATGCGAG
ATTGCAGCGGCGGGCGGGCACCTCGAGGTGCTGCAGTGGCTGCGCCACAT
TAACTGCGGCTGGAGCGAGGCCACGTGCATCGCCGCCGCCAGGGCTGGAC
ACCTCGACGTCCTGCAGTGGGCACACGCCAACGGCTGCCCCTGGGGCACG
GACACGTGCACGGCTGCGGCGAAGTGCGGAGACCTCGAGGTGCTGCAGTT
CGCGCGCGCCGCCGGCTGCCCCTGGGACCGCTGGGTGTGCACCAGTGCGG
CGGACCTGGGGCACCTGGAGGTGCTGCGGTGGGCGCGCGCAAACGGCTGC
CCCTGGGATGCTCAAAGCGCGTGCTCCAACGCCGCGGTTCTCGGGCGCCT
CGACGTGCTGCAGTTCGCGCACGCGGACGGGCAGCCGTGGGACGAGAGGA
CGTGCAGGTATGCGGCGCTGCACAATCACCTCGAGCTGCTGCAGTGGGCG
CACGCCAACGGCTGCCCCTGGGACGCGCGCACGTGCGGCATAGCTGCGGA
GAAGGGGCACTTTGAAGTGCTGCAGTGGGCGCACGCCAACGGCTGCCCCT
GGGATGACCGCACCAGCCAACCCCTTACGGAGGGGGGGCCCCTTGACATG
CTGCAATGGGCGCAGCGCCATGGCTGCCCCATGCCCGCCGACACCTGCAT
CCTCGCAGTGACGCGGGGAGATCTGCGCATGCTGCAGTGGGCGCGCTCCG
TCGGCTGTCCCTGGGACGCAAAGGTCTGCGCAGTCGCTGCGCAAAGCTGC
CTCTTTCCGATTCTGCAGTGGGCGCACGCTAACGGCTGCCCCAGGGACGA
ACGGACGTGCAGCGGCGCTGCCAAATACGGCGACCTGCGTATGCTGCAGT
GGGCGCAGCGCCGTGGCTGTCCCACGCCCGCTGACGCCTGCAGCATTGCG
GTATCGCGCAATGACCTGCGCATGCTGCAGTGGGCGCGCTCCATCGGCTG
TCCTTGGGACGCAGAGGTTTGCGCTTCCGCCGCGAAACTCGGGATCTTGA
GGATTCTGCGGTGGGCGCACGCTAACGGGTGCCCCTGGGACGAACGGACG
TGCAGCCGTGCTGCCGAAAACGGCGACCTGCGCATGCTGCAGTGGGCGTG
GGAGCACTGGAGCCCCTGGGACGAGCGGACGTGCAGCCACGCCGCCGAAA
ACGGCGATCTTCGCATGTTGCAGTGGGCGTGGGAGCACAGGTGCCCCTGG
GACGAATGGACGTGCAGCCACGCCGCCAAAAACGGCGATCTACGCATGCT
GCGGTGGGCGCGGGAGCGCGGGTGCCCCTGGGAAGAGCGCACGTGCATCA
ACGCTGCGAGCGGCGGGCACCTACGCGTGCTGCAGTGGGCGCGCGCGAAT
GGGTGCCCGTGGAATTGCTACGTCATTGCGTGCGCGGACTATGAGCACCA
CCAGCACGTGGTCGAGTGGGCGCGCGCCAACGGCTGCCCCGAGCGCCCTG
AGGCGGTTTCGTCGGGGAGCGAAGGCGGCTACTACTAG
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