mRNA_16031 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|132588 vs. uniprot
Match: A0A836CIK2_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIK2_9STRA) HSP 1 Score: 342 bits (877), Expect = 5.360e-119 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 1 Query: 1 MQHLKIDEKLGEGSFGVVYKGQYMLAPVAIKKIKKMSSRARETYIADLTALLSLRHRNIVSIVAHGYGILVMPLVSTSLTGYLETASKTRPVGRALEYGELKAITCNCCSALLYMHHHVKSCVTHNDIKPDNTLLELSPSGEVVKAMLGDVGLSRMCSANTGFTFIGTPGFM 516 MQHLKIDEKLGEGSFGVVYKGQYMLAPVAIKKIKKMSSRARETYIADLTALLSLRHRNIVSIVAHGYGILVMPLVSTSLTGYLETASKTRPVGRALEYGELKAITCNCCSALLYMHHHVKSCVTHNDIKPDNTLLELSPSGEVVKAMLGDVGLSRMCSANTGFTFIGTPGFM Sbjct: 1 MQHLKIDEKLGEGSFGVVYKGQYMLAPVAIKKIKKMSSRARETYIADLTALLSLRHRNIVSIVAHGYGILVMPLVSTSLTGYLETASKTRPVGRALEYGELKAITCNCCSALLYMHHHVKSCVTHNDIKPDNTLLELSPSGEVVKAMLGDVGLSRMCSANTGFTFIGTPGFM 172
BLAST of jgi.p|Trimin1|132588 vs. uniprot
Match: A0A446UDJ5_TRITD (Protein kinase domain-containing protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446UDJ5_TRITD) HSP 1 Score: 95.9 bits (237), Expect = 6.770e-20 Identity = 69/177 (38.98%), Postives = 96/177 (54.24%), Query Frame = 1 Query: 19 DEKLGEGSFGVVYKG--QYMLAPVAIKKIKKMSSRARETYIADLTALLSLRHRNIVSIVAHGYG----ILVMPLVST-SLTGYLETASKTRPVGRALEYGELKAITCNCCSALLYMHHHVKSCVTHNDIKPDNTLLELSPSGEVVKAMLGDVGLSRMCS----ANTGFTFIGTPGFM 516 DEKLGEG FG VY+G Q VAIK++ K SS+ R YIA++T + LRHRN+V +V + +LV L++ SL +L +++ L + I SAL Y+H + CV H DIKP N +L+ S A LGD GL+R+ + A+T T GT G+M Sbjct: 236 DEKLGEGGFGAVYRGFLQDQGLHVAIKRVSKTSSQGRREYIAEVTIIGRLRHRNLVQLVGWCHKADELLLVYKLMTNGSLDAHLYNSTEV------LTWATRYQIILGMGSALTYLHQEWEQCVVHRDIKPSNVMLDSS-----FNAKLGDFGLARLVNHSSGAHTTTTLAGTKGYM 401
BLAST of jgi.p|Trimin1|132588 vs. uniprot
Match: A0A453L427_AEGTS (Protein kinase domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453L427_AEGTS) HSP 1 Score: 92.8 bits (229), Expect = 5.550e-19 Identity = 67/177 (37.85%), Postives = 96/177 (54.24%), Query Frame = 1 Query: 19 DEKLGEGSFGVVYKG--QYMLAPVAIKKIKKMSSRARETYIADLTALLSLRHRNIVSIVAHGYG----ILVMPLVST-SLTGYLETASKTRPVGRALEYGELKAITCNCCSALLYMHHHVKSCVTHNDIKPDNTLLELSPSGEVVKAMLGDVGLSRMCS----ANTGFTFIGTPGFM 516 +EKLGEG FG VY+G Q VAIK++ K S++ R YIA++T + LRHRN+V +V + +LV L++ SL +L +++ L + I SAL Y+H + CV H DIKP N +L+ S A LGD GL+R+ + A+T T GT G+M Sbjct: 83 EEKLGEGGFGAVYRGFLQDQGLHVAIKRVSKTSNQGRREYIAEVTIIGRLRHRNLVQLVGWCHKADELLLVYELMTNGSLDAHLYNSTEV------LTWATRYQIILGMGSALTYLHQEWEQCVVHRDIKPSNVMLDSS-----FNAKLGDFGLARIVNHSSGAHTTTTLAGTKGYM 248
BLAST of jgi.p|Trimin1|132588 vs. uniprot
Match: A0A3B6MTD0_WHEAT (Protein kinase domain-containing protein n=7 Tax=Triticinae TaxID=1648030 RepID=A0A3B6MTD0_WHEAT) HSP 1 Score: 92.8 bits (229), Expect = 9.040e-19 Identity = 67/177 (37.85%), Postives = 96/177 (54.24%), Query Frame = 1 Query: 19 DEKLGEGSFGVVYKG--QYMLAPVAIKKIKKMSSRARETYIADLTALLSLRHRNIVSIVAHGYG----ILVMPLVST-SLTGYLETASKTRPVGRALEYGELKAITCNCCSALLYMHHHVKSCVTHNDIKPDNTLLELSPSGEVVKAMLGDVGLSRMCS----ANTGFTFIGTPGFM 516 +EKLGEG FG VY+G Q VAIK++ K S++ R YIA++T + LRHRN+V +V + +LV L++ SL +L +++ L + I SAL Y+H + CV H DIKP N +L+ S A LGD GL+R+ + A+T T GT G+M Sbjct: 374 EEKLGEGGFGAVYRGFLQDQGLHVAIKRVSKTSNQGRREYIAEVTIIGRLRHRNLVQLVGWCHKADELLLVYELMTNGSLDAHLYNSTEV------LTWATRYQIILGMGSALTYLHQEWEQCVVHRDIKPSNVMLDSS-----FNAKLGDFGLARIVNHSSGAHTTTTLAGTKGYM 539
BLAST of jgi.p|Trimin1|132588 vs. uniprot
Match: UPI001D0350DB (L-type lectin-domain containing receptor kinase IX.1-like n=1 Tax=Triticum aestivum TaxID=4565 RepID=UPI001D0350DB) HSP 1 Score: 91.7 bits (226), Expect = 2.230e-18 Identity = 69/176 (39.20%), Postives = 94/176 (53.41%), Query Frame = 1 Query: 19 DEKLGEGSFGVVYKGQY--MLAPVAIKKIKKMSSRARETYIADLTALLSLRHRNIVSIVAHGYG----ILVMPLVST-SLTGYLETASKTRPVGRALEYGELKAITCNCCSALLYMHHHVKSCVTHNDIKPDNTLLELSPSGEVVKAMLGDVGLSRM---CSANTGFTFIGTPGFM 516 +EKLGEG FG VY+G VAIK++ K SS+ R Y+A++T + LRHRN+V +V + +LV L++ SL +L ASK+ L + I SALLY+H + CV H DIKP N +L+ S A LGD GL+R+ C T GT G+M Sbjct: 257 EEKLGEGGFGAVYRGHLHEQGLHVAIKRVSKTSSQGRREYVAEVTIIGRLRHRNLVQLVGWCHEADELLLVYELMTNGSLDDHLY-ASKS-----VLAWPARYRIILGMGSALLYLHQEWEQCVVHRDIKPSNVMLDAS-----FNARLGDFGLARLVDHCRGAHTTTLAGTRGYM 421
BLAST of jgi.p|Trimin1|132588 vs. uniprot
Match: UPI001F5CC7E8 (L-type lectin-domain containing receptor kinase IX.1-like n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5CC7E8) HSP 1 Score: 91.3 bits (225), Expect = 3.220e-18 Identity = 67/176 (38.07%), Postives = 94/176 (53.41%), Query Frame = 1 Query: 19 DEKLGEGSFGVVYKG--QYMLAPVAIKKIKKMSSRARETYIADLTALLSLRHRNIVSIVAHGYG----ILVMPLVST-SLTGYLETASKTRPVGRALEYGELKAITCNCCSALLYMHHHVKSCVTHNDIKPDNTLLELSPSGEVVKAMLGDVGLSRMCSANTG-FTFI--GTPGFM 516 +EKLGEG FG VY+G VAIK++ K SS+ R YIA++T + LRHRN+V +V + +LV L+ SL +L + K L + I SA+LY+H + CV H DIKP N +L+ S A LGD GL+R+ + G +T + GT G+M Sbjct: 359 EEKLGEGGFGAVYRGFLHEQGLHVAIKRVSKTSSQGRREYIAEVTIIGRLRHRNLVQLVGWCHNADELLLVYELMEKGSLDAHLYNSKKM------LTWSARYKIILGMGSAVLYLHQECEQCVVHRDIKPSNVMLDSS-----FNAKLGDFGLARLVDHSCGGYTTMLAGTKGYM 523
BLAST of jgi.p|Trimin1|132588 vs. uniprot
Match: UPI001F5DCFE3 (L-type lectin-domain containing receptor kinase IX.1-like n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5DCFE3) HSP 1 Score: 90.5 bits (223), Expect = 5.680e-18 Identity = 67/177 (37.85%), Postives = 93/177 (52.54%), Query Frame = 1 Query: 19 DEKLGEGSFGVVYKGQYMLA--PVAIKKIKKMSSRARETYIADLTALLSLRHRNIVSIVAHGYG----ILVMPLVST-SLTGYLETASKTRPVGRALEYGELKAITCNCCSALLYMHHHVKSCVTHNDIKPDNTLLELSPSGEVVKAMLGDVGLSRMCS----ANTGFTFIGTPGFM 516 +EKLGEG FG VY+G VAIK++ K SS+ R YIA++T + LRHRN+V +V + ILV L++ SL +L + K L + I SAL+Y+H + CV H DIKP N +L+ + A LGD GL+R+ A+T GT G+M Sbjct: 362 EEKLGEGGFGAVYRGLLRDEGLQVAIKRVSKTSSQGRREYIAEVTIIGRLRHRNLVQLVGWCHKADELILVYELMTNDSLDVHLYNSEKI------LTWAIRHKIILGIGSALMYLHQEWEQCVVHRDIKPSNVMLD-----SLFNAKLGDFGLARLVDHSRDAHTTAVIAGTRGYM 527
BLAST of jgi.p|Trimin1|132588 vs. uniprot
Match: UPI001F5E2002 (L-type lectin-domain containing receptor kinase IX.1-like n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5E2002) HSP 1 Score: 90.5 bits (223), Expect = 5.730e-18 Identity = 67/176 (38.07%), Postives = 94/176 (53.41%), Query Frame = 1 Query: 19 DEKLGEGSFGVVYKG--QYMLAPVAIKKIKKMSSRARETYIADLTALLSLRHRNIVSIVAHGYG----ILVMPLVST-SLTGYLETASKTRPVGRALEYGELKAITCNCCSALLYMHHHVKSCVTHNDIKPDNTLLELSPSGEVVKAMLGDVGLSRMCSANTG-FTFI--GTPGFM 516 +EKLGEG FG VY+G VAIK++ K SS+ R YIA++T + LRHRN+V +V + +LV L+ SL +L + K L + I SA+LY+H + CV H DIKP N +L+ S A LGD GL+R+ + G +T + GT G+M Sbjct: 359 EEKLGEGGFGAVYRGFLHEQGLHVAIKRVSKTSSQGRREYIAEVTIIGRLRHRNLVQLVGWCHNADELLLVYELMEKGSLDAHLYNSKKM------LTWSARYKIILGMGSAVLYLHQEWEQCVVHRDIKPSNVMLDSS-----FNAKLGDFGLARLVDHSCGGYTTMLAGTKGYM 523
BLAST of jgi.p|Trimin1|132588 vs. uniprot
Match: UPI001F5CDB18 (L-type lectin-domain containing receptor kinase IX.1-like n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5CDB18) HSP 1 Score: 90.1 bits (222), Expect = 7.770e-18 Identity = 67/177 (37.85%), Postives = 93/177 (52.54%), Query Frame = 1 Query: 19 DEKLGEGSFGVVYKGQY--MLAPVAIKKIKKMSSRARETYIADLTALLSLRHRNIVSIVAHGYG----ILVMPLVST-SLTGYLETASKTRPVGRALEYGELKAITCNCCSALLYMHHHVKSCVTHNDIKPDNTLLELSPSGEVVKAMLGDVGLSRMCS----ANTGFTFIGTPGFM 516 +EKLGEG FG VY+G VAIK++ K SS+ R YIA++T + LRHRN+V +V + +LV L++ SL +L + K L + I + SAL+Y+H CV H DIKP N +L+ S A LGD GL+R+ A+T GT G+M Sbjct: 340 EEKLGEGGFGAVYRGLLHDQGLQVAIKRVSKTSSQGRREYIAEVTIIGRLRHRNLVQLVGWCHKADKLLLVYELMTNDSLDVHLYNSEKI------LTWAIRHKIILDIGSALMYLHQEWDQCVVHRDIKPSNVMLDSS-----FNAKLGDFGLARLVDHSRDAHTTAVIAGTMGYM 505
BLAST of jgi.p|Trimin1|132588 vs. uniprot
Match: F2E6D0_HORVV (Predicted protein n=2 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=F2E6D0_HORVV) HSP 1 Score: 89.4 bits (220), Expect = 1.450e-17 Identity = 66/173 (38.15%), Postives = 93/173 (53.76%), Query Frame = 1 Query: 19 DEKLGEGSFGVVYKG--QYMLAPVAIKKIKKMSSRARETYIADLTALLSLRHRNIVSIVAHGYGILVMPLVSTSLT-GYLET-ASKTRPVGRALEYGELKAITCNCCSALLYMHHHVKSCVTHNDIKPDNTLLELSPSGEVVKAMLGDVGLSRMCSANTGF---TFIGTPGFM 516 +EKLGEG FG VY+G VAIK++ KMSS+ R YIA++T + LRHRN+V +V + + LV +T G L+ K+R + L + IT AL+Y+H + CV H DIKP N +L+ S A LGD GL+R+ + G GT G++ Sbjct: 368 EEKLGEGGFGAVYRGFLHDRGLHVAIKRVSKMSSQGRREYIAEVTTIGRLRHRNLVQLVGWCHKADELLLVYELMTNGSLDVHLYKSRDI---LTWPIRYKITLGMGHALMYLHQEWEQCVVHRDIKPSNVMLDSS-----FDARLGDFGLARLVDHSRGAHTTMLAGTKGYL 532 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|132588 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_16031 ID=mRNA_16031|Name=jgi.p|Trimin1|132588|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=516bp|location=Sequence derived from alignment at Contig_198:108937..109452- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCAGCACTTGAAAATCGATGAAAAACTCGGTGAGGGCAGCTTTGGTGTback to top protein sequence of jgi.p|Trimin1|132588 >Trimin1|132588|gw1.198.9.1 ID=Trimin1|132588|gw1.198.9.1|Name=jgi.p|Trimin1|132588|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=172bp MQHLKIDEKLGEGSFGVVYKGQYMLAPVAIKKIKKMSSRARETYIADLTAback to top mRNA from alignment at Contig_198:108937..109452- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_16031 ID=mRNA_16031|Name=jgi.p|Trimin1|132588|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=516bp|location=Sequence derived from alignment at Contig_198:108937..109452- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_198:108937..109452- >mRNA_16031 ID=mRNA_16031|Name=jgi.p|Trimin1|132588|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=516bp|location=Sequence derived from alignment at Contig_198:108937..109452- (Tribonema minus UTEX_B_3156 )back to top |