mRNA_16001 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|353057
Unique NamemRNA_16001
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|353057 vs. uniprot
Match: A0A835ZC70_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC70_9STRA)

HSP 1 Score: 814 bits (2103), Expect = 7.450e-295
Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 2 
Query:  116 MSDLLASGGSHNKPHRTHQAPDTRTGDEGSSKRNIQRKAHKQGSAHAGGGGHGQKGKWDPTDDGSLGVVKLMPGDPNYVSEEEEENYVLVSDSAIISPTNGQGGRASRQAPMLGLSEFKQRLSTIFEEYFLSEDVQEALRSIGELKSAAYHYEVVKRGINMSLDKRDHERELVSKLLSEAYPQVLDSQEIGKGFQRLFEMIDDIQLDAPAARPLVASFLARAVVDEILPPSFLRDPTIAGLGGDIVEGARRLLSRDHVLSRVERVWGPGDGRSVQELKVAIDQLLEEYLMSRQMDEAIQCVRDLNCAHFHHEIVKRAVKQAIDKGEQDCTAMSSLLAQLHSLEVISTAQVVMGFDRLYELVPDLLLDMPTAESLLDKFVKQAQQDGCLPQDYVKPPPAPPKPVRELDEVEAEPSGDVEA 1372
            MSDLLASGGSHNKPHRTHQAPDTRTGDEGSSKRNIQRKAHKQGSAHAGGGGHGQKGKWDPTDDGSLGVVKLMPGDPNYVSEEEEENYVLVSDSAIISPTNGQGGRASRQAPMLGLSEFKQRLSTIFEEYFLSEDVQEALRSIGELKSAAYHYEVVKRGINMSLDKRDHERELVSKLLSEAYPQVLDSQEIGKGFQRLFEMIDDIQLDAPAARPLVASFLARAVVDEILPPSFLRDPTIAGLGGDIVEGARRLLSRDHVLSRVERVWGPGDGRSVQELKVAIDQLLEEYLMSRQMDEAIQCVRDLNCAHFHHEIVKRAVKQAIDKGEQDCTAMSSLLAQLHSLEVISTAQVVMGFDRLYELVPDLLLDMPTAESLLDKFVKQAQQDGCLPQDYVKPPPAPPKPVRELDEVEAEPSGDVEA
Sbjct:    1 MSDLLASGGSHNKPHRTHQAPDTRTGDEGSSKRNIQRKAHKQGSAHAGGGGHGQKGKWDPTDDGSLGVVKLMPGDPNYVSEEEEENYVLVSDSAIISPTNGQGGRASRQAPMLGLSEFKQRLSTIFEEYFLSEDVQEALRSIGELKSAAYHYEVVKRGINMSLDKRDHERELVSKLLSEAYPQVLDSQEIGKGFQRLFEMIDDIQLDAPAARPLVASFLARAVVDEILPPSFLRDPTIAGLGGDIVEGARRLLSRDHVLSRVERVWGPGDGRSVQELKVAIDQLLEEYLMSRQMDEAIQCVRDLNCAHFHHEIVKRAVKQAIDKGEQDCTAMSSLLAQLHSLEVISTAQVVMGFDRLYELVPDLLLDMPTAESLLDKFVKQAQQDGCLPQDYVKPPPAPPKPVRELDEVEAEPSGDVEA 419
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BLAST of jgi.p|Trimin1|353057 vs. uniprot
Match: D7G128_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G128_ECTSI)

HSP 1 Score: 461 bits (1187), Expect = 5.480e-156
Identity = 259/413 (62.71%), Postives = 303/413 (73.37%), Query Frame = 2 
Query:  116 MSDLLASGGSHNKPHRTHQAPDTRTGDEGSSKRNIQRKAHKQGSAHAGGGGHGQKGKWDPTDDGSLGVVK---LMPGDPNYVSE--EEEENYVLVSDSAIISPTNGQGGRASRQAP--MLGLSEFKQRLSTIFEEYFLSEDVQEALRSIGELKSAAYHYEVVKRGINMSLDKRDHERELVSKLLSEAYPQVLDSQEIGKGFQRLFEMIDDIQLDAPAARPLVASFLARAVVDEILPPSFLRDPTIAGLGGDIVEGARRLLSRDHVLSRVERVWGPGDGRSVQELKVAIDQLLEEYLMSRQMDEAIQCVRDLNCAHFHHEIVKRAVKQAIDKGEQDCTAMSSLLAQLHSLEVISTAQVVMGFDRLYELVPDLLLDMPTAESLLDKFVKQAQQDGCLPQDYVKPPPAP-PKPVRE 1330
            MS L   G  +    ++H AP++R GDEG+SKRNI RK   +G    GGGG GQKG+WDPT+DGS    +      GDPNY SE  E + NYVL S             R+ R+ P  +  L EFK+ L TI EEYFLSED+ E LRS+ ELKS AYHYE+VKRGINMS+D +DHERELVSKLLS+AYP +L S+E+ KGF+RLFEMIDDIQLDAP AR LVASFLARAV DEI+PPS LR+     LGG+IV+GARRLLSRDHVLSR+E VWGPGDGR V+ELKVAIDQLL EYL+SRQ DEA  CV++L+C+ FHHEIVKRAVK A+DK + D TAMSSLLA L+  EVIS  Q   GFDRL+E++PDL+LD P A SLL KF +QA  DGCLP DY KPPP P P P  E
Sbjct:    1 MSSLATQGEMNGHKVKSHPAPESRVGDEGTSKRNITRKGGVKGKN--GGGGGGQKGRWDPTEDGSEAQARDGIADKGDPNYDSEADEHDNNYVLHS------------YRSQRRVPGPLHTLPEFKRHLKTIIEEYFLSEDISEVLRSVKELKSPAYHYEIVKRGINMSIDAKDHERELVSKLLSDAYPDILSSREVCKGFERLFEMIDDIQLDAPNARTLVASFLARAVADEIIPPSVLRNAAFLSLGGEIVKGARRLLSRDHVLSRLEHVWGPGDGRPVEELKVAIDQLLVEYLLSRQQDEAAACVKELDCSLFHHEIVKRAVKAALDKTDDDRTAMSSLLAYLNKNEVISDEQSKKGFDRLHEILPDLVLDTPAAPSLLTKFTQQAISDGCLPADY-KPPPTPSPSPAAE 398
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BLAST of jgi.p|Trimin1|353057 vs. uniprot
Match: A0A6H5J8P8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8P8_9PHAE)

HSP 1 Score: 427 bits (1097), Expect = 9.780e-143
Identity = 234/364 (64.29%), Postives = 273/364 (75.00%), Query Frame = 2 
Query:  116 MSDLLASGGSHNKPHRTHQAPDTRTGDEGSSKRNIQRKAHKQGSAHAGGGGHGQKGKWDPTDDGSLGVVK---LMPGDPNYVSE--EEEENYVLVSDSAIISPTNGQGGRASRQAPMLGLSEFKQRLSTIFEEYFLSEDVQEALRSIGELKSAAYHYEVVKRGINMSLDKRDHERELVSKLLSEAYPQVLDSQEIGKGFQRLFEMIDDIQLDAPAARPLVASFLARAVVDEILPPSFLRDPTIAGLGGDIVEGARRLLSRDHVLSRVERVWGPGDGRSVQELKVAIDQLLEEYLMSRQMDEAIQCVRDLNCAHFHHEIVKRAVKQAIDKGEQDCTAMSSLLAQLHSLEVISTAQVVMGFDRLYE 1192
            MS L   G  +    ++H AP++R GDEG+SKRNI RK   +G    GG   GQKG+WDPT+DGS    +      GDPNY SE  E + NYVLVSDS +I+P    G       P+  L EFK+RL TI EEYFLSED+ E LRS+ ELKS AYHYE+VKRGINMS+D +DHERELVSKLLS+AYP +L S+E+ KGF+RLFEMIDDIQLDAP AR LVASFLARAV DEI+PPS LR+     LGG+IV+GARRLLSRDHVLSR+E VWGPGDGR V+ELKVAIDQLL EYL+SRQ DEA  CV++L+C+ FHHEIVKRAVK A+DK + D TAMSSLLA L+  EVIS  Q   GFDRLYE
Sbjct:    1 MSSLATQGEMNGHKVKSHPAPESRVGDEGTSKRNITRKGGAKGKN--GGXXXGQKGRWDPTEDGSEAQARDGIADKGDPNYDSEADEHDNNYVLVSDSTVIAPNAVAG-------PLHTLPEFKRRLKTIIEEYFLSEDISEVLRSVKELKSPAYHYEIVKRGINMSIDAKDHERELVSKLLSDAYPDILSSREVCKGFERLFEMIDDIQLDAPNARTLVASFLARAVADEIIPPSVLRNAAFLSLGGEIVKGARRLLSRDHVLSRLEHVWGPGDGRPVEELKVAIDQLLVEYLLSRQQDEAAACVKELDCSLFHHEIVKRAVKTALDKTDDDRTAMSSLLAYLNKNEVISDEQSKKGFDRLYE 355
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BLAST of jgi.p|Trimin1|353057 vs. uniprot
Match: A0A7S2B0R3_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B0R3_9STRA)

HSP 1 Score: 355 bits (910), Expect = 9.720e-114
Identity = 197/393 (50.13%), Postives = 260/393 (66.16%), Query Frame = 2 
Query:  134 SGGSHNKPHRTHQAPDTRTGDEGSSKRNIQRKA-HKQGSAHAGGGGHGQKGKWDPTDDGSLGVV----KLMPGDPNYVSEEEEENYVLVSDSAIISPTNGQGG----------RASRQAPMLGLSEFKQRLSTIFEEYFLSEDVQEALRSIGELKSAAYHYEVVKRGINMSLDKRDHERELVSKLLSEAYPQVLDSQEIGKGFQRLFEMIDDIQLDAPAARPLVASFLARAVVDEILPPSFLRDPTIAGLGGDIVEGARRLLSRDHVLSRVERVWGPGDGRSVQELKVAIDQLLEEYLMSRQMDEAIQCVRDLNCAHFHHEIVKRAVKQAIDKGEQDCTAMSSLLAQLHSLEVISTAQVVMGFDRLYELVPDLLLDMPTAESLLDKFVKQAQQ 1267
            SGG+H    R    PDT+  +EGS++RNI RK  + + + HA         K D  DDGS  +      + PGDP Y   E +ENYVLVS  A  S TNG             R     PML LSEFK+R+     EYF SED +E + +I EL    YHYEVVKR I+M++D+++ ERELVSKLLS + P++L + ++GKGF+RLFE IDD++LD P A  + A+FLARAVVDEI+PP+FL DP + GLGGD+V   +R+LSRDH  SRVER+WGPGDGR V ELKVAIDQLL EYL+S+Q+ EA +CVR++   HFHHE+VKRAV   +DK   +  AM +LLA LH  E +S AQ+  GF +L++ +PDL+LD P A  +++ F+ Q ++
Sbjct:   28 SGGAHTIQRRRDGPPDTKVVEEGSARRNIVRKGGNSEVARHA---------KTDVVDDGSSVLYGQSPPIEPGDPLYDPYENDENYVLVS--ADESVTNGPRSPPRHNYDPDHRRMVFGPMLTLSEFKRRVVEALNEYFSSEDAEETIGTIKELGCPEYHYEVVKRAISMAMDRKERERELVSKLLSASSPELLTTDQLGKGFERLFEFIDDLELDTPGATEITAAFLARAVVDEIIPPAFLVDPVVVGLGGDVVAQTKRILSRDHQYSRVERIWGPGDGRPVSELKVAIDQLLVEYLLSKQLSEAERCVREMEVPHFHHELVKRAVAAVLDKPADEQAAMLNLLAHLHKTETVSPAQLEQGFQKLFQKLPDLVLDSPNASRVINSFLAQTKE 409
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BLAST of jgi.p|Trimin1|353057 vs. uniprot
Match: A0A7S2D3U1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D3U1_9STRA)

HSP 1 Score: 334 bits (857), Expect = 3.240e-105
Identity = 193/386 (50.00%), Postives = 256/386 (66.32%), Query Frame = 2 
Query:  176 PDTRTGDEGSSKRNIQRKAHKQGSAHAGGGGHGQKGKWDPTDDGSLGVV----KLMPGDPNYVSEEEEENYVLVSDSAI---ISPTNGQGGRASRQA--PMLGLSEFKQRLSTIFEEYFLSEDVQEALRSIGELKSAAYHYEVVKRGINMSLDKRDHERELVSKLLSEA-YPQVLDSQ------EIGKGFQRLFEMIDDIQLDAPAARPLVASFLARAVVDEILPPSFLRDPTIAGLGGDIVEGARRLLSRDHVLSRVERVWGPGDGRSVQELKVAIDQLLEEYLMSRQMDEAIQCVRDLNCAHFHHEIVKRAVKQAIDKGEQDCTAMSSLLAQLHSLEVISTAQVVMGFDRLY-ELVPDLLLDMPTAESLLDKFVKQAQQDGCLP 1282
            P+TR   EGS++RNI RK  KQ        G G K K   TDDGS  +      L PGDP +   E+++NYVLVS+++      P         RQ   PML L+EFK+R++   +E+F SEDV+EALR+I EL    YHYE+VKR I+M +D+++ ERELVSKLLS A  P   DSQ      ++GKGF+RL E IDD+++DAP A  + A+FLARAVVDEILPP+FL DP + G+GGD+V+  R +LS++H  SRVER+WGPGDGR V+ELK+A+DQLL EYL+S  + EA +C R+L   HFHHE+VKRAV   +DK E +   MS LL  LH+ E++S  QV+ GFD+L   L+ +L LD P A  +++   K A+ DG LP
Sbjct:   87 PETRGTSEGSARRNIMRKGQKQ-------AGLGSKMKARVTDDGSAVLYGDQPSLDPGDPAFEPYEDDDNYVLVSNASSGPRSPPRRNYDPDFRRQVIGPMLTLAEFKRRVTETLDEFFSSEDVEEALRTIKELGCEDYHYELVKRSISMGMDRKERERELVSKLLSAASMPPNADSQPLLNLNQLGKGFERLMEFIDDLEIDAPGATDMAAAFLARAVVDEILPPAFLADPVVVGIGGDVVQLTRLILSQEHQYSRVERIWGPGDGRPVKELKIAMDQLLSEYLLSGDLIEAARCTRELASPHFHHELVKRAVVLVLDKPEGEQLKMSRLLKDLHACEILSPTQVLQGFDKLRGPLLAELKLDSPQAGVVIEALFKLAESDGLLP 465
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BLAST of jgi.p|Trimin1|353057 vs. uniprot
Match: A0A7S2R8F4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R8F4_9STRA)

HSP 1 Score: 304 bits (779), Expect = 3.340e-94
Identity = 181/393 (46.06%), Postives = 246/393 (62.60%), Query Frame = 2 
Query:  149 NKPH-----RTHQAPDTRTGDEGSSKRNIQRKAHKQGSAHAGGGGHG----------QKGKWDPTDDGS---LGVVKLM-PGDPNYVSEEEEENYVLVSDSAIISPTNGQGG-----RASRQAPMLGLSEFKQRLSTIFEEYFLSEDVQEALRSIGELKSAAYHYEVVKRGINMSLDKRDHERELVSKLLSEAYPQVLDSQEIGKGFQRLFEMIDDIQLDAPAARPLVASFLARAVVDEILPPSFLRDPTIAGLGGDIVEGARRLLSRDHVLSRVERVWGPGDGRSVQELKVAIDQLLEEYLMSRQMDEAIQCVRDLNCAHFHHEIVKRAVKQAIDKGEQDCTAMSSLLAQLHSLEVISTAQVVMGFDRLYELVPDLLLDMPTAESLLDKFVK 1255
            +KPH         APDTR   EG++KRNI RK                          + K    DDGS   LG  +L+ PG+P Y  E+ ++NYVLVS                  R     P L L+EFK+++ +  +EYF SED +EA+R I EL    YHYEVVKR +++SLD ++ ERELVSK LS A+P +L++  + KGF+RL E++D++++D PAA  L+ASFLARA+VDEILPPSFL DP IAG+GG++V  A+R+LSR+H  SR++RVWGPGDGR+V ELKV +D LL EYL+S  M EA +CV++L   HFHHE+VKRA+   +DK +++  +M  L+ QL   EVIST Q   GF ++  L+ DL LD P A  + + FV+
Sbjct:   34 SKPHDKKGQHAKAAPDTRGVKEGTAKRNILRKGSGXXXXXXXXXXXXXXXXXXXXKTHRNKLGMLDDGSDVLLGASELIEPGNPLYDEEDGDDNYVLVSGDFDAGSEEAHKAFDPDYRRIVIGPRLALAEFKRQVVSAMQEYFSSEDAEEAVRIILELACPEYHYEVVKRAVSLSLDHKERERELVSKFLSAAFPTLLNADHVRKGFERLLEVVDELEIDVPAASNLLASFLARAIVDEILPPSFLMDPYIAGVGGEVVSQAKRVLSREHQYSRLQRVWGPGDGRAVPELKVEMDNLLLEYLVSGDMVEAERCVKELQVPHFHHELVKRAIVTVLDKSDEEQQSMVRLIVQLCESEVISTHQRTGGFQKIESLLDDLSLDAPEAHKVFE-FVR 425
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BLAST of jgi.p|Trimin1|353057 vs. uniprot
Match: A0A7S3PL44_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PL44_9STRA)

HSP 1 Score: 302 bits (774), Expect = 7.910e-94
Identity = 173/367 (47.14%), Postives = 232/367 (63.22%), Query Frame = 2 
Query:  239 QGSAHAGGGGHGQKGKWDPTDDGSLGVVKLMPGDPNYVSEEEEENYVLVSDSAIISPTNGQGG-----RAS--------------RQAPMLGLSEFKQRLSTIFEEYFLSEDVQEALRSIGELKSAAYHYEVVKRGINMSLDKRDHERELVSKLLSEAYPQ-VLDSQEIGKGFQRLFEMIDDIQLDAPAARPLVASFLARAVVDEILPPSFLRDPTIAGLGGDIVEGARRLLSRDHVLSRVERVWGPGDGRSVQELKVAIDQLLEEYLMSRQMDEAIQCVRDLNCAHFHHEIVKRAVKQAIDKGEQDCTAMSSLLAQLHSLEVISTAQVVMGFDRLYELVPDLLLDMPTAESLLDKFVKQAQQDGCL 1279
            +G A  GGGG      W    D      K+   DPNY SE++++  +LVS    +     + G     RAS              RQAP +GL EFKQR+  I +EY +SED  E +  I EL+S   HYE+V+R I++++++++ EREL+S +L+E     VL  ++ GKGF+RLFEM+DDI LD P AR  +A FLARAV DE+LPP+FL DP + G+GG++VE A+ LLS  H L R+ERVWGP DG  V  LK  I  +LEE+L S  MDE   CV+ LN  HFHHEI+KRA+  ++DK +++   MSSLLA+L+S EVIS  Q  +GF RL+E +PDL LD P A  ++D FV QA +DGCL
Sbjct:   19 RGLAKKGGGGGNYT--WGKPGDELTPESKIDKRDPNYDSEQDDDGIILVSAEEQMVQQAMRSGIDVKRRASSKFGSEYDPYTSFQRQAPKVGLQEFKQRVIKITDEYLVSEDSTEFMTGIKELQSPMLHYELVRRMISLAMERKERERELISLILTEMRANGVLSIKQCGKGFERLFEMVDDIVLDVPNARKYIAQFLARAVADEVLPPAFLSDPLVEGMGGEMVEQAKVLLSIKHGLVRLERVWGPSDGSPVDVLKGEIKMMLEEFLSSSDMDEVCVCVKRLNVPHFHHEIIKRAIVISLDKKDKEKAMMSSLLAELYSREVISQQQFHLGFQRLFEALPDLELDTPGAAKIIDIFVNQALKDGCL 383
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BLAST of jgi.p|Trimin1|353057 vs. uniprot
Match: A0A7S3GUG6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GUG6_9STRA)

HSP 1 Score: 298 bits (763), Expect = 1.160e-92
Identity = 171/379 (45.12%), Postives = 242/379 (63.85%), Query Frame = 2 
Query:  176 PDTRTGDEGSSKRNIQRKAHKQGSAHAGGGGHGQKGK----WDPTDDGSLGVVKLMPGDPNYVSEEEEENYVLVSDS-AIISPTNGQGGRASRQAPMLGLSEFKQRLSTIFEEYFLSEDVQEALRSIGELKSAAYHYEVVKRGINMSLDKRDHERELVSKLLSEAYPQVLDSQEIGKGFQRLFEMIDDIQLDAPAARPLVASFLARAVVDEILPPSFLRDPTIAGLGGDIVEGARRLLSRDHVLSRVERVWGPGDGRSVQELKVAIDQLLEEYLMSRQMDEAIQCVRDLNCAHFHHEIVKRAVKQAIDKGEQDCTAMSSLLAQLHSLEVISTAQVVMGFDRLYELVPDLLLDMPTAESLLDKFVKQAQQDGCLPQDYVK 1297
            P+T+TG+ G++KRNI RK           GG G+  K        DDGS+ V        NY  +E++ NY    D+ A   P      R +       L  +K+R+ +I  EYF+S D+ +    I ++ +  + YE VKR INMS D+ D ERELVS+LLS  YP +  S  IGKGF+RLFE+ID+I+ DAPAA+ ++A+FLARAVVDEILPPSFL D  ++ LGG++VE A+ +LSRDH  +++ER WGPGDGR V+++KV+IDQ+L+EYL+S  ++EA++C  +L    + HE+VKRAV  A+D+  ++   MS+LLA L   E++S+ Q V GF+RLY ++PDL LD P A  +L  F  +A+ DG L   Y K
Sbjct:   11 PETQTGEAGTAKRNILRK-----------GGPGKSRKDGLPGSAVDDGSIHV-------DNYALDEDDPNYDSEDDNGATPVPKYSPLHRDNVAKSNTSLVAYKKRVESIAAEYFVSGDMDDTACYIQDIDAPEFTYEFVKRLINMSCDQGDRERELVSQLLSTLYPDIFSSNAIGKGFERLFEIIDEIEKDAPAAKQIIATFLARAVVDEILPPSFLADAVVSTLGGEVVEQAKLMLSRDHGSAKLERSWGPGDGRPVEDIKVSIDQILQEYLLSSDVNEALRCFAELKVPLYFHEVVKRAVINAMDRTAEEQVTMSALLAALSRAELLSSQQAVKGFNRLYHMLPDLALDTPAAVQVLANFEARAKADGVLAATYSK 371
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BLAST of jgi.p|Trimin1|353057 vs. uniprot
Match: A0A7S2UMK3_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UMK3_9STRA)

HSP 1 Score: 296 bits (758), Expect = 5.020e-91
Identity = 175/397 (44.08%), Postives = 239/397 (60.20%), Query Frame = 2 
Query:  179 DTRTGDEGSSKRNIQRKAHKQG---SAHAGGGGHGQKGKW-DPTDDGSLGVVKLM-PGDPNYVSEEEEENYVLVS--------DSAIISPTNGQGGRASRQAPMLGLSEFKQRLSTIFEEYFLSEDVQEALRSIGELKSAAYHYEVVKRGINMSLDKRDHERELVSKLLSEAYPQVLDSQEIGKGFQRLFEMIDDIQLDAPAARPLVASFLARAVVDEILPPSFLRDPTIAGLGGDIVEGARRLLSRDHVLSRVERVWGPGDGRSVQELKVAIDQLLEEYLMSRQMDEAIQCVRDLNCAHFHHEIVKRAVKQAIDKGEQDCTAMSSLLAQLHSLEVISTAQVVMGFDRLYELVPDLLLDMPTAESLLDKFVKQAQQDGCLPQDYVKPPPAPPKPVRE 1330
            DT   +EGS++RNI RK    G   S H   GGHG KGKW D   D S G   +  P DP Y    EE  Y+L S        D  I  P   +    +   PML L+EFK +L    +EYF S DV E ++S+ +++  AYH  VVKR +++SLDK   EREL+S+LL+E +P  L    +  GF+ L   +DD+ +D P ARP+V  FLARAVVDE++PP+FL +      G  ++E A  LLSR+H  +R+ER+WGPGDGR V ELK  +DQLL+EYL SR++DEA +CVR++N  HFHHE+VKR ++  ++ GE D  AM++L + L    ++S  QV  G  RLY+++ D+ LD+P+A SL  +F    +  GC P  YV P   P  P  E
Sbjct:   52 DTVVKEEGSARRNITRKKSDAGNFDSQHKKQGGHG-KGKWRDEGVDESEGAYDVSDPNDPLYDDTAEEGKYILTSPDNNENEGDPTIYDPIANR----NVYGPMLTLTEFKIQLDEAIKEYFDSADVTEVIQSLSDMRCLAYHPHVVKRAVSLSLDKGPRERELISRLLTELHPDPLTDANLSTGFELLLNSLDDLSIDIPDARPIVGCFLARAVVDEVVPPAFLSNANNTHPGELVIEKAVGLLSREHCNARLERIWGPGDGRPVAELKTVMDQLLKEYLQSRELDEAARCVREMNAPHFHHELVKRGIRICMEMGELD--AMAALFSFLVKNAILSEHQVAKGISRLYKVLGDITLDVPSAPSLFTEFEAMIRDGGCFPPSYVSPAAPPVSPEEE 441
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BLAST of jgi.p|Trimin1|353057 vs. uniprot
Match: A0A7S4E3U3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E3U3_9STRA)

HSP 1 Score: 293 bits (749), Expect = 2.810e-90
Identity = 168/351 (47.86%), Postives = 227/351 (64.67%), Query Frame = 2 
Query:  248 AHAGGGGHGQKGKW-DPTDDG--SLGVVKLMPGDPNYVSEEEEE-NYVLVSDSAIISPTN---GQGGRASRQAPMLGLSEFKQRLSTIFEEYFLSEDVQEALRSIGELKSAAYHYEVVKRGINMSLDKRDHERELVSKLLSEAYPQVLDSQEIGKGFQRLFEMIDDIQLDAPAARPLVASFLARAVVDEILPPSFLRDPTIAGLGGDIVEGARRLLSRDHVLSRVERVWGPGDGRSVQELKVAIDQLLEEYLMSRQMDEAIQCVRDLNCAHFHHEIVKRAVKQAIDKGEQDCTAMSSLLAQLHSLEVISTAQVVMGFDRLYELVPDLLLDMPTAESLLDKFVKQAQQDGCL 1279
            A +G GGH  K +W D T+DG  S   V L  GDP Y S  E++ NYVLVS    +   +    Q    S   P   L+EFK+RLS   +E F SEDV+E +RS+ EL+   + +E+VK+ I+ +LD+R  E EL S+LLS + P++L  +++G+GF+RLFE +DD+ +DAP A  +V+ FL R+VVDE LPP +L D   A LGG++V  ARRLLSR+H LS++ER+WGPGDGR V ELK A+D L+ EYL S  + EA +CVR+L    F HE+VKRAV  A+ KG+ D  AMS LL +L   EV+ST Q   GF RL + + DL  D+P A  LL +F   A +DG +
Sbjct:   46 APSGSGGH--KYEWKDRTNDGTTSPAAVALDAGDPMYSSGGEDDGNYVLVSGEVPVQAPHKSYSQEHGCSLIGPQYTLAEFKRRLSECIDELFASEDVEECVRSLLELQCPEFSFEIVKKVISKALDRRAKECELASRLLSASTPRLLSERDVGRGFERLFEAVDDLSIDAPNAPTIVSDFLVRSVVDEALPPRYLGDRVFAALGGEVVTRARRLLSREHALSKLERIWGPGDGRDVGELKHAVDDLVGEYLTSHDLTEATKCVRELAAPAFGHEVVKRAVTAALPKGDADRKAMSELLKKLVLEEVVSTTQAKRGFARLNDALQDLTCDVPNASELLKEFESSAARDGVI 394
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353057 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZC70_9STRA7.450e-295100.00Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
D7G128_ECTSI5.480e-15662.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J8P8_9PHAE9.780e-14364.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2B0R3_9STRA9.720e-11450.13Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
A0A7S2D3U1_9STRA3.240e-10550.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2R8F4_9STRA3.340e-9446.06Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S3PL44_9STRA7.910e-9447.14Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S3GUG6_9STRA1.160e-9245.12Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2UMK3_9STRA5.020e-9144.08Hypothetical protein n=2 Tax=Attheya septentrional... [more]
A0A7S4E3U3_9STRA2.810e-9047.86Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_142contigContig_142:198670..207376 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|353057|estExt_Genemark1.C_Ctg_1420023
BRITEko00000,ko00001,ko00002,ko01000,ko04147
KEGG ReactionR05979
KEGG ModuleM00073
KEGG Pathwayko00510,ko01100,ko04141,ko05205,ko05206,map00510,map01100,map04141,map05205,map05206
KEGG koko:K01228,ko:K16865
EC3.2.1.106
GOsGO:0000003,GO:0001817,GO:0001818,GO:0001837,GO:0001932,GO:0001933,GO:0002237,GO:0003006,GO:0003007,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006355,GO:0006357,GO:0006469,GO:0006915,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007293,GO:0007507,GO:0007568,GO:0007569,GO:0008150,GO:0008219,GO:0008283,GO:0008285,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009719,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010558,GO:0010563,GO:0010605,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010660,GO:0010661,GO:0010941,GO:0010942,GO:0012501,GO:0019219,GO:0019220,GO:0019221,GO:0019222,GO:0019953,GO:0022412,GO:0022414,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030154,GO:0030509,GO:0030727,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031347,GO:0031348,GO:0031349,GO:0031399,GO:0031400,GO:0032101,GO:0032102,GO:0032103,GO:0032268,GO:0032269,GO:0032496,GO:0032501,GO:0032502,GO:0032504,GO:0032872,GO:0032873,GO:0033673,GO:0033993,GO:0034097,GO:0034391,GO:0034393,GO:0035051,GO:0035722,GO:0042127,GO:0042221,GO:0042325,GO:0042326,GO:0042981,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043086,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043405,GO:0043407,GO:0043408,GO:0043409,GO:0043506,GO:0043508,GO:0043549,GO:0044092,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0045595,GO:0045596,GO:0045597,GO:0045786,GO:0045859,GO:0045892,GO:0045934,GO:0045936,GO:0046328,GO:0046329,GO:0048134,GO:0048135,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048609,GO:0048646,GO:0048660,GO:0048662,GO:0048731,GO:0048762,GO:0048856,GO:0048869,GO:0050727,GO:0050728,GO:0050729,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051094,GO:0051147,GO:0051148,GO:0051150,GO:0051151,GO:0051171,GO:0051172,GO:0051174,GO:0051239,GO:0051241,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051338,GO:0051348,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0055006,GO:0060255,GO:0060317,GO:0060485,GO:0060548,GO:0060935,GO:0060936,GO:0060938,GO:0060939,GO:0060940,GO:0065007,GO:0065009,GO:0070302,GO:0070303,GO:0070671,GO:0070848,GO:0070887,GO:0071216,GO:0071219,GO:0071222,GO:0071310,GO:0071345,GO:0071349,GO:0071363,GO:0071396,GO:0071495,GO:0071772,GO:0071773,GO:0071900,GO:0071901,GO:0072359,GO:0080090,GO:0080134,GO:0080135,GO:1900015,GO:1900016,GO:1901222,GO:1901224,GO:1901342,GO:1901343,GO:1901700,GO:1901701,GO:1902531,GO:1902532,GO:1902533,GO:1902679,GO:1903506,GO:1903507,GO:1904035,GO:1904037,GO:1904705,GO:1904706,GO:1904760,GO:1904761,GO:1905063,GO:1905064,GO:1905459,GO:1905461,GO:2000026,GO:2000112,GO:2000113,GO:2000351,GO:2000353,GO:2000736,GO:2000738,GO:2001141
Preferred namePDCD4
Descriptionepithelial to mesenchymal transition involved in cardiac fibroblast development
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0403@1|root,KOG0403@2759|Eukaryota
Evalue2.63e-158
Seed ortholog2880.D7G128
Hectar predicted targeting categoryother localisation
TranscriptId353379
TrackFilteredModels1
ProteinId353057
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353057gene_16001Tribonema minus UTEX_B_3156 geneContig_142 198670..207376 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353057Trimin1|353057|estExt_Genemark1.C_Ctg_1420023Tribonema minus UTEX_B_3156 polypeptideContig_142 199145..207012 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_16001_1exon_16001_1Tribonema minus UTEX_B_3156 exonContig_142 198670..198704 +
exon_16001_2exon_16001_2Tribonema minus UTEX_B_3156 exonContig_142 199065..199166 +
exon_16001_3exon_16001_3Tribonema minus UTEX_B_3156 exonContig_142 199456..199509 +
exon_16001_4exon_16001_4Tribonema minus UTEX_B_3156 exonContig_142 200064..200129 +
exon_16001_5exon_16001_5Tribonema minus UTEX_B_3156 exonContig_142 200422..200525 +
exon_16001_6exon_16001_6Tribonema minus UTEX_B_3156 exonContig_142 200911..200991 +
exon_16001_7exon_16001_7Tribonema minus UTEX_B_3156 exonContig_142 201394..201477 +
exon_16001_8exon_16001_8Tribonema minus UTEX_B_3156 exonContig_142 202186..202272 +
exon_16001_9exon_16001_9Tribonema minus UTEX_B_3156 exonContig_142 202602..202670 +
exon_16001_10exon_16001_10Tribonema minus UTEX_B_3156 exonContig_142 202943..203018 +
exon_16001_11exon_16001_11Tribonema minus UTEX_B_3156 exonContig_142 203307..203364 +
exon_16001_12exon_16001_12Tribonema minus UTEX_B_3156 exonContig_142 203681..203743 +
exon_16001_13exon_16001_13Tribonema minus UTEX_B_3156 exonContig_142 204205..204265 +
exon_16001_14exon_16001_14Tribonema minus UTEX_B_3156 exonContig_142 204796..204867 +
exon_16001_15exon_16001_15Tribonema minus UTEX_B_3156 exonContig_142 205275..205378 +
exon_16001_16exon_16001_16Tribonema minus UTEX_B_3156 exonContig_142 205746..205843 +
exon_16001_17exon_16001_17Tribonema minus UTEX_B_3156 exonContig_142 206334..206386 +
exon_16001_18exon_16001_18Tribonema minus UTEX_B_3156 exonContig_142 206905..207376 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_16001UTR5_16001Tribonema minus UTEX_B_3156 five_prime_UTRContig_142 198670..198704 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_16001CDS_16001Tribonema minus UTEX_B_3156 CDSContig_142 199145..199166 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_16001UTR3_16001Tribonema minus UTEX_B_3156 three_prime_UTRContig_142 207013..207376 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_16001 ID=mRNA_16001|Name=jgi.p|Trimin1|353057|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1739bp|location=Sequence derived from alignment at Contig_142:198670..207376+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CAGACACAAGCACCGAGCAAGGAGCGCACCCCGAGGTCAGGGAAGGAGCA
GGAGCAGCGGAGGTAATAGATACTGCCGCGAAGGCTTGTTCGGCGCAGGT
CTTGCTGGCTTCAGCATGTCGGACCTGCTGGCCTCAGGTGGCAGCCACAA
CAAGCCTCACCGCACACACCAAGCCCCCGACACCCGCACAGGAGACGAGG
GCTCTTCCAAACGGAACATTCAGCGGAAGGCACACAAACAGGGCAGTGCT
CACGCAGGTGGCGGCGGCCATGGTCAAAAGGGCAAGTGGGACCCCACTGA
CGATGGCTCCCTGGGTGTTGTGAAGCTCATGCCAGGCGACCCTAACTATG
TGTCAGAAGAGGAGGAGGAGAACTATGTGTTGGTCTCGGACAGTGCAATC
ATCAGCCCTACCAATGGACAGGGAGGCAGGGCCAGCCGTCAGGCACCCAT
GCTGGGACTGTCAGAGTTCAAGCAGCGGCTGAGCACTATTTTTGAGGAGT
ACTTCCTGTCTGAGGACGTGCAGGAGGCGCTGCGCAGCATAGGTGAACTC
AAGTCTGCTGCCTACCACTATGAAGTGGTCAAGAGGGGGATCAACATGTC
CCTGGACAAGAGGGACCATGAGAGGGAGCTCGTTTCCAAGCTCCTGAGTG
AGGCGTACCCGCAGGTGCTGGACTCTCAAGAGATTGGCAAAGGCTTCCAG
CGTCTGTTTGAGATGATCGATGACATACAGCTGGATGCACCAGCGGCCCG
CCCCCTAGTGGCGTCCTTCCTGGCTCGCGCTGTTGTGGATGAGATTCTGC
CGCCATCCTTCCTCAGGGACCCCACTATCGCAGGACTGGGCGGAGACATA
GTGGAGGGAGCAAGGCGTCTGCTTTCACGAGACCATGTTCTGAGCCGTGT
GGAAAGGGTGTGGGGACCTGGCGATGGACGTTCAGTGCAGGAGCTTAAGG
TTGCCATTGACCAGCTGCTGGAGGAGTACCTGATGTCTAGGCAAATGGAC
GAGGCAATCCAGTGCGTGCGTGACCTCAACTGTGCGCACTTCCACCACGA
GATTGTGAAGCGGGCCGTCAAGCAGGCCATCGACAAGGGCGAGCAGGACT
GCACTGCCATGAGCAGCCTCCTGGCTCAGCTGCATAGCCTCGAGGTGATC
TCCACAGCACAGGTCGTCATGGGCTTTGACCGGCTCTATGAGCTTGTGCC
AGACCTGTTGCTGGACATGCCCACTGCGGAGTCCCTGCTGGACAAGTTTG
TCAAGCAGGCACAGCAGGATGGGTGCTTGCCCCAGGACTATGTCAAGCCA
CCCCCGGCACCCCCTAAGCCAGTCCGTGAACTTGATGAGGTGGAGGCAGA
GCCCTCTGGGGATGTGGAAGCTTGAGACAGCTTGGCTCAAGAAGGCATGG
AAGGGGATTGGCAGTGGGGGGGAGCAGTCGGGGGGTGAAAACAGGGACAC
CTCGTGGTGGTACCAAGATACTTCTACTCTGCAAGGGCGTGTGGGAAGTT
GAGGAGAGATGGATGGTTTGTAGAATCGTACGAGCGTTGCATGTCACACG
TGTCATGTGGCATGTCATGTGGCATGTGTCATGTGGCATGTGTCATGTTG
CATGTGGGGCCCGTACAGAGCGTGGTGGTAAGCAGTGTCGACCAGGATCG
GCAGGAGGGCTTGCACTGCTGCGCCTCTTAGTGCTGTTGTGCGGCAGGTG
CATGTACTGAGGAACGCTACATACACAGAGATCAACGCA
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protein sequence of jgi.p|Trimin1|353057

>Trimin1|353057|estExt_Genemark1.C_Ctg_1420023 ID=Trimin1|353057|estExt_Genemark1.C_Ctg_1420023|Name=jgi.p|Trimin1|353057|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=420bp
MSDLLASGGSHNKPHRTHQAPDTRTGDEGSSKRNIQRKAHKQGSAHAGGG
GHGQKGKWDPTDDGSLGVVKLMPGDPNYVSEEEEENYVLVSDSAIISPTN
GQGGRASRQAPMLGLSEFKQRLSTIFEEYFLSEDVQEALRSIGELKSAAY
HYEVVKRGINMSLDKRDHERELVSKLLSEAYPQVLDSQEIGKGFQRLFEM
IDDIQLDAPAARPLVASFLARAVVDEILPPSFLRDPTIAGLGGDIVEGAR
RLLSRDHVLSRVERVWGPGDGRSVQELKVAIDQLLEEYLMSRQMDEAIQC
VRDLNCAHFHHEIVKRAVKQAIDKGEQDCTAMSSLLAQLHSLEVISTAQV
VMGFDRLYELVPDLLLDMPTAESLLDKFVKQAQQDGCLPQDYVKPPPAPP
KPVRELDEVEAEPSGDVEA*
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mRNA from alignment at Contig_142:198670..207376+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_16001 ID=mRNA_16001|Name=jgi.p|Trimin1|353057|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8707bp|location=Sequence derived from alignment at Contig_142:198670..207376+ (Tribonema minus UTEX_B_3156 )
CAGACACAAGCACCGAGCAAGGAGCGCACCCCGAGGTAAGGAAGTGGATT
CTGTCCACTTTTTGCGTGCTTGCAGCACCAGAGCGCGTGTATGAGCTGTG
CACACTTGACCTGCGCCGCCCTTGACAGCAAGCCAGAAAGCCGCTTCTTC
CTTGAGCGGGCGGGTTGGCAGGTTTTAAAGTGTGGTAAGAATGTTTCGGT
TCCTGCATTCATTTAATCTCAGTCCTCCCACATTCCTGTGTCGTATGGAG
ATTTGCTGCTGCCCTGAGGCCCAACTTTAGATCGAGGGGCATGTTCAACT
TGAGCCCGCCGGGTGCGTCGTTTTGCTGTCGTTTCGCAGCACGACATCAT
GCATCTATTCCTTCCACCATGTCCTGACTGCATCTCATTGCCTAGGTCAG
GGAAGGAGCAGGAGCAGCGGAGGTAATAGATACTGCCGCGAAGGCTTGTT
CGGCGCAGGTCTTGCTGGCTTCAGCATGTCGGACCTGCTGGCCTCAGGTG
AGTGCTCGGCTAGCTTCGATAAGTTGGCTGTAAAAGATCGGTGCAAGGGT
GAGTTTGTCACGCCCTCCCATGAGGTGTCGGCTGTTGCACGTCCGCTGCA
GCCTTCTTGTCGCTTTCGCTCGCACTTGAAGTTTCTCGAAGATAAGTGCA
AATGATTCAAATAAGTGGTTGGCAACTGCAATCAATTCCTCGAGTCGCTG
CTGTTCCTTGGGACTCCTGGAGCCATTGCCCATCAGACAAACCGCGCACT
GAGGTGTTTATACGGCGTTGATATTGTGCTTAGCAGGTGGCAGCCACAAC
AAGCCTCACCGCACACACCAAGCCCCCGACACCCGCACAGGTGAAGTCTG
CCAGTAAGAAACCGTTGCGCTGTTCTTTGTGACTGTTGCACTCGGGTGGT
ATGTATGCATTAGAGTCCTCGCCCTGCTTTCATTGTTGATGTGACAAGCT
TCGGCAGTCCTTGCACTCATGCGATTGTGTTCACAGAAGCAAAAAGCGGT
TCCTTCAAATCATCTGGCTTCACCAACAATGTAGTTCCTTGTCACATTAT
GCATGCCGTGCTGCATCAGCAGCCTCCAATGCGCGTGCCCAACCTTTTAT
CACTGATTTGTAACTCCAATCATACTGGCACAGGGCTAGAGTAGGGCCGT
GAAGGCCTGAGCACATGAAGTGAGTGCCTTACCTCGTATGCGTTACTGCT
TTAGATTCTCAAGCAGTCCTACAACGGCACAAGGCAGCCTCGATCATGTT
TACCAGCACAAATTGTAATGCATTTCAAGTTTAGTACGCGCTTTGTTCAT
CAATCAGGTTGAGCCACCTGATGCACAATGCCGACAACTGCGGCTGCTGT
GTTTTTCTCATGACACTGCCTGTATACATGTGATTTGTCAACAGGAGACG
AGGGCTCTTCCAAACGGAACATTCAGCGGAAGGCACACAAACAGGGCAGT
GCTCACGCAGGTATGCGCACAATGCAGGTGCTGTGCAATGTCAAAACCAC
AGCAGACGGCCAGTTGCACAGTGTGCTGCTCGAAATATGCCAAACTTCAG
AGCCTCTGGGCTGGCTCATACGAAGCATGCGGCTAATGTTGCATGAATCT
GGCGATACTGGCCGAACCTGCCCACCTGGTTTGGCTCACAACCGCATCCA
GTGTGGCTCGCCATACCTATACCACAGTGCGTAGTTTCCTGCTTGCGGCG
GTTCTGCAGCATTTGTTTTACTCTCACAAGGTCATGGCTTGATGCTGTGC
AGGTGGCGGCGGCCATGGTCAAAAGGGCAAGTGGGACCCCACTGACGATG
GCTCCCTGGGTGTTGTGAAGCTCATGCCAGGCGACCCTAACTATGTGTCA
GAAGAGGTAAGGCTCGCACTGCTGCCACTGGCGTCACTTGCATCAGCATC
AGACTCGAATGAGCATGCAGTACAGGATGGGTGATGGCTGACTGTCATGA
TTGACTGTCGTGACTGCCCTTGCCTCACTTTGAATCATCACTCAGAGCCC
TAGTTCATCTTCTCGCATGAGGCAGCTTTGGAATCGCGTAATTATTCAGT
TTTCGTTCTCTGGGGTGGCCAAACTATATCACTGCAGAAACCTGTGTAGG
ACTATGTCAATGATCATCCATCTGTGGTCTCATGATTCACTGTGATGACC
CCAGCGTGGCCTTTTGCATGCAATCACCGCTGATATTTTGTCTCGTACTG
CTTTGAAACAACCATATACATGTGCTGCCATACATGTGCAGGAGGAGGAG
AACTATGTGTTGGTCTCGGACAGTGCAATCATCAGCCCTACCAATGGACA
GGGAGGCAGGGCCAGCCGTCAGGCAAGCGCTGCCATGCAGTTGATACATT
GTTGGGGACTGTAGCGTTGACAACCAGCAGTTGCTGCTGGCACAGTTGGC
CACAATCAATCAGGTTCAAAACCTGTATCGTGCAGCGAACACTGCTGCCA
TTGACCTTCGCTGTCATTGCGCCAATGCAAGTGTGTACTGTTTTCCTGCT
GATCAGTGCACATAATTCTGCTTCCGCTGCACGTACTGTAACGAAGTAGC
AACGACAATGACAGCTGAAATTTGGGGGAACAGTGAGTTCCCTTCTGCAG
CTTGCTTGCTTTCTGCCTGTATCCACATAATGTTGTTAGGGCATTGCAAG
AGGTTGCTTTGTCAAGGCAGGCTGAAGGTTCTCATTTCAACCCAAACATC
AACTGTGGCTGTCTTGGCGTGCAGGCACCCATGCTGGGACTGTCAGAGTT
CAAGCAGCGGCTGAGCACTATTTTTGAGGAGTACTTCCTGTCTGAGGACG
TGCAGGAGGTGAGCACATGAACATACACCATGGTGCCTCTGAGGTACCAT
ACATGAAAACTCTTGGACAGCGGCATGCATTGGCTTTTGCTGCAATTTCT
GCTCGTGCAAGTGCTCATGTGATGAGTCACCTGGTCCGCTGCAGTACTGA
CAGATCACCACATTGCATGTTTTATGGTGATGAGTGCTCAGCCTGTGCGC
ATGTTTACCCAATGAGCATACTTCGGGGTTACCACATGTTTCTGTTGGAT
TCAAAACAACTTGCGTTACTCGTAGCACACCTCAAGTCGGGCAAGCAGTT
CAGATCATATTTGTCCTGAACTCGAGATTGATGTGTGCTTCTAGCTGGCG
TGAATGAGCCTTGGACAGACGCCAACTCTGAGGAACCCTGCAAAGAAAGG
CCGATTCCGTTCTGCACAGTGTACATCTTCTTCATGTTCAGCGTATCGAT
TCAGCATCATGCCTTCCGCAGCACAATTGCCTTGCTGATGCTGTGATGTC
AGTGCCCACCACCAAGACATTAGCTCAGCTTTGATGGATAGTGTTTGTGC
AGCAGTTTACGCTGTGGTAAGGCGGACGATCATCCCAGAAGTAGCGTGCT
TGCCATGATTACTTGCTTTCCATGATTACTCGCTGCCTCTACTATGATGC
ATTCGTCAGTCCACACTAGGGTGCATCCTTTCCAAGACAATGATGTTCGT
AATTTGTTGGCCACAGGCGCTGCGCAGCATAGGTGAACTCAAGTCTGCTG
CCTACCACTATGAAGTGGTCAAGAGGGGGATCAACATGTCCCTGGACAAG
AGGGTGAGTGATTAGCGATGTGCCAGGTTGTGTCACGTGTCATGTGTAAC
ATGGGGAGGACATGACAGGTCAGGTGTCCCTTGCAGGCACGTAGTATGTT
GATGTTGGGTAGTTTTCGTGCTATCCTGCAGACGGGGCCGGGGCCCATAA
CTGCATATTTCTGTGGCGGTGTCAACCGTTCATTTTTGTGATATGACAGT
GTGATGGTCACTTAGTACGATTGCTTTGCTGGATCCTGTGCTGAATGGCA
AGGCGGCGCTGTGTCTGTCCTGTAAATGCAGTGCTTCTCATATGTCATGT
GATGTTATGTGATGTGATGTAATGTGATGCAGGACCATGAGAGGGAGCTC
GTTTCCAAGCTCCTGAGTGAGGCGTACCCGCAGGTGCTGGACTCTCAAGA
GGTGAGCAATGGCGATACTTCCAAGTCTCATGTGCTCCTTGTGTTGACAC
TGGAGCTAGCACATGGATTTGGCTGTGCTCTCGGGGCGCTCAAACACATT
GACTATCAAGCGCAATTGCCGTACACCTGAGAGTGTTGTTGCATTCTTCA
TTGGCAAATAGGCCGCACAACATCTGTCTGACCTTCATTGGCTGAATCTC
AAGCAAGGCAACCTGCGCCATTGCTGAAAAGCTGCTCTTGCTCGTGCCCT
CTCCATGTATGTCTGCCCATCAGATTGGCAAAGGCTTCCAGCGTCTGTTT
GAGATGATCGATGACATACAGCTGGATGCACCAGCGGCCCGCCCCCTAGG
TGAGAAGATAAGAGAAGCCAGAAGGGCAGCTATTTCTGTTGGACTATATT
GCCAATGTATATCACTATGTAAGTGCATCATTCGGCTGTGGACATGTAGT
GGACTGCTGTCAATTGTGTCTGGTCACATTTGCAATGATACATATAAGTA
CATTTGTTCGTTCACCAATTTCTGCGTAAAATTTAATCTGCAGTAGCCAG
CCCGTATCATGTGCAACAGCTCATGACTTATTGTTGCGCGCTGCGGATGA
TAACGAATGCATCGCTGCCACTCTGCTTGTGCTGCAGTGGCGTCCTTCCT
GGCTCGCGCTGTTGTGGATGAGATTCTGCCGCCATCCTTCCTCAGGTGAG
AAACTGATGCGCGTGAAGACACAGAGGAAATGAGCATGCTGCGTGTGTTT
GAAGACTGTGTCAGACGGTGTGGTGTGCGCATGTGCAAGCGTTGGTGCAT
ACACACGATTGAATTGTATCCAGGCAACATTTCTGGCATGGCAGCTTAGA
GGGTTTTCATTTGGAAATGAACAATTGCATTGAACAGAGACCCTCAATTT
TGGAACCTCAATTGCTTGCCTGAGCAAGCCTTCATGGCATGCATGCGAAC
GCGCAGACATTCAATCAAAGGCTACGTTGACAATGGGCGTTTTGATGTTG
TGCTGTCGCAGGGACCCCACTATCGCAGGACTGGGCGGAGACATAGTGGA
GGGAGCAAGGCGTCTGCTTTCACGGCAAGCATTCACATCAATGCTCTAGT
ATCAAAGGCGTGTGTGCCCCGCCACTTTGGCTTGATCACTCTGCAGATGC
TCCTGGCCATGGTAGCAGTCTGCCTCTGTGTGCCATCATGCACCCTCGCA
CTGAAGACAGCATGCGCTGTCGTGTCAATCTGACACATATGTTGAGCGCG
CCAACGTTTATGTTTGTGGGCGCACTGTGAGATTGTGCGGCGCTGCCCTG
CCGCCTTTGATGGCATATTCCTGGATGCCAAATGATTTCACATAAAGCGT
TGCAACAGTGCATGCCGGCGTTTGTAAAATGTCACTCTATAGCACAACTG
TTTGTGTTGGTGGCCACAACAGCCCCTACAATGCTTGTGTGTGCATCACA
GCAGCAGAGTTTTCGCAGCTTGTACATCCATGAAAGCGCAGTGGTGGCTT
ACACATTTTCTGTGTCTGTTGCTTATGCTGTACAGAGACCATGTTCTGAG
CCGTGTGGAAAGGGTGTGGGGACCTGGCGATGGACGTTCAGTGCAGGTAC
AAAAACTATTTCACGTCAAAACCTTTCTAATGTAGCAAGTGCTTGGTATG
CCCGTCACAGCATATCAGTCTTACATGAACCTCGCTGCATAGTTAGTCCA
GGTGTCACATTATGCCGTGCGATCACAAGCGGGCATGTCATTGTTGGAGG
CGGCATACACATATTTTATGCATGTCAAGGCAGGCAGGACTGGACTGCAT
GTTCTGATGCATGCATGAGCGCTGTCACTGGCGCATCACGTTATCCGTGA
TTTGGATAAGTGGATAGGGATGACCAAGACCATGAGCGTTGTGGAGCCAT
ATATACAACAAAGCGCTGCTTGATTCACCACTGCCACACTTGATGGAGCT
CAGTAGATTGCAATCACAGCCCCACAAGTGCACACATCATGCGCGCTGCG
CATGCCAACTGCGTGGATGCAGCCATTGTCATATGTGACATGACTGCTTG
CTCAGCTTTTCATGTCTAACTGCCTTGACGTATCAGCGTGTCACAATTGT
TTTGTACGGTTGCGATGACTTTCCAGGAGCTTAAGGTTGCCATTGACCAG
CTGCTGGAGGAGTACCTGATGTCTAGGCAAATGGACGAGGCAATCCAGGT
AAATTAAGGCTGAAGGCCATTTTGCGACGGAGAGGCATCATGGTCATGGT
CCTCTCTTCATAATTTGTGCATCTATCATCAGCACTTGAAATACAACCGT
AATGCAGCAGATACGCAGTTCGTCTCAGTGAGTGTGCGCGTGACTTGATC
ACCGCTGCCACACAAAATGCATTGCTATTTACATAAGTGTTGCGTGCGCC
AGTTGCAACACCTGATCGTACAACGTGAAGCTGGATCCTCATGTACATGT
GCGTCTGATGTTGAAAGACGTTTTAAACATGCTCAATGACAGCCCCCTTG
CTTGTGGTTCCTTGATAACTTCTCCCTGGTGCAAGCGTAGCGTCGTGTGC
CATTGTACCACCAGCCGAAAGCTACCGTGCACTGCTTTCCCTTGTGTGTG
TGCAGTGCGTGCGTGACCTCAACTGTGCGCACTTCCACCACGAGATTGTG
AAGCGGGCCGTCAAGCAGGCCATCGACAAGGGCGAGCAGGACTGCACTGC
CATGAGCAGGTCAGCGGATTTACACAGTGTGCTTGCTCATGGCGCAAGCT
GCCTCACTGAGGATCTTCAATAGAGCCATTTTAATGGCAGGTTGTCTGTT
TGGTGTTTTGGTGGGGACTGCAGTGTTTAATGGAATTGCAAGCACTTGGG
GTGGTTTAAGTTATTGCTGATTACTTGCTTGCAAAACGACATTGATCAGA
CTAAGGTTGTACGCAGCACGCCTTGCATGTATGAAGCCATCATCCATCAC
TTTTGCAGCGTCTCCCTTAGTGCAAAATGTTGTGTTGTCCATCTGTGCCT
GAACGTCTGTGTGCTGTTGATGATTTGCCTTGTGCTGCGCCGTCTGACCT
TGGCATTGCTTCATCTGTCTGTGCAGCCTCCTGGCTCAGCTGCATAGCCT
CGAGGTGATCTCCACAGCACAGGTCGTCATGGGCTTTGACCGGCTCTATG
AGCTTGTGCCAGACCTGTTGCTGGGTAAGTTTTTTGGGCGATAAATGACA
TGTCATAACACCACCTGCTAGTGGAGTTGCGGCGCTGGTGTGGTGGTGCT
GGGTCGGTGATCGGTAGCTTGGTCTTCAGCATGAGTTTTCATGGAGTAAA
CAGACTGATCAGCAATGTACATGACTAGGGCTGTGCTTCCAATATAGATT
TGCGTCACTGTCCAGGACTCCGCATGATCCAGGCCAGCCGATTTGGTCGC
AGTGGTGTGACAGGGCCAGCTTGTGTCAAAACGGGCAAACGATTTGCTTT
GAGGTGGCAACGTGCAGTGCAAAGATAGTGACACCTTCAAGAAGCTGTTT
CTGTCCTGGCGCCCATCTGCTGGTTGGAAGTATAGTGACTTGCCGCTGGT
CTGCATTCATTGGGGTACATACACATGCTCGACTCTGGTTCACATCCTGA
AGTATGCGATGAGTGTTGTTGTGTGGCGACTTACTTGCACTGTTTGTTGT
CTGGTGCACTTCAGACATGCCCACTGCGGAGTCCCTGCTGGACAAGTTTG
TCAAGCAGGCACAGCAGGTCAGTGCTTTTTTGCCCCAGAGTACATACTGC
AACTGATTGTACTTGAAGTTTTGAGATCAGGGGCGAAATCAGCCTTTACA
GTTGGCCAATGAATCGGCTGTATTTGCTGGCTGTGTGCATCGCTTGAACG
TTGAGCTATTAGCCATGACGGTCATCACCAGCATCTCACAGCCTGGCCGC
CATGCAATGATGACTGCACCTATGACAAGAACACTACTGCGTTGTTGACA
ATGTCATAGCAGAACGAAAATGACTGGAGTCAGCGCCGTTGTTTAGCACA
TCAATTTGCATCATATGCTCTGTTTTCACATGTTCCCCAAGGTTGCGGCT
GTCACCTCACAACCGCAGTCTCTCGTCGTGACGTGTTCTTTCAGGTCACA
AGCTACTTCCTACTTGTCACTGTAGACTAGTTCCCTCTCACACCAGTTCA
CACATCGATGTGGAAAATTTCATGTTGAGCTTCCAACACCCTCGATGCTG
ACTACTTTTGATTGTGGCATTGTTTACTTTGTCAGGATGGGTGCTTGCCC
CAGGACTATGTCAAGCCACCCCCGGCACCCCCTAAGCCAGTCCGTGAACT
TGATGAGGTGGAGGCAGAGCCCTCTGGGGATGTGGAAGCTTGAGACAGCT
TGGCTCAAGAAGGCATGGAAGGGGATTGGCAGTGGGGGGGAGCAGTCGGG
GGGTGAAAACAGGGACACCTCGTGGTGGTACCAAGATACTTCTACTCTGC
AAGGGCGTGTGGGAAGTTGAGGAGAGATGGATGGTTTGTAGAATCGTACG
AGCGTTGCATGTCACACGTGTCATGTGGCATGTCATGTGGCATGTGTCAT
GTGGCATGTGTCATGTTGCATGTGGGGCCCGTACAGAGCGTGGTGGTAAG
CAGTGTCGACCAGGATCGGCAGGAGGGCTTGCACTGCTGCGCCTCTTAGT
GCTGTTGTGCGGCAGGTGCATGTACTGAGGAACGCTACATACACAGAGAT
CAACGCA
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Coding sequence (CDS) from alignment at Contig_142:198670..207376+

>mRNA_16001 ID=mRNA_16001|Name=jgi.p|Trimin1|353057|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1260bp|location=Sequence derived from alignment at Contig_142:198670..207376+ (Tribonema minus UTEX_B_3156 )
ATGTCGGACCTGCTGGCCTCAGGTGGCAGCCACAACAAGCCTCACCGCAC
ACACCAAGCCCCCGACACCCGCACAGGAGACGAGGGCTCTTCCAAACGGA
ACATTCAGCGGAAGGCACACAAACAGGGCAGTGCTCACGCAGGTGGCGGC
GGCCATGGTCAAAAGGGCAAGTGGGACCCCACTGACGATGGCTCCCTGGG
TGTTGTGAAGCTCATGCCAGGCGACCCTAACTATGTGTCAGAAGAGGAGG
AGGAGAACTATGTGTTGGTCTCGGACAGTGCAATCATCAGCCCTACCAAT
GGACAGGGAGGCAGGGCCAGCCGTCAGGCACCCATGCTGGGACTGTCAGA
GTTCAAGCAGCGGCTGAGCACTATTTTTGAGGAGTACTTCCTGTCTGAGG
ACGTGCAGGAGGCGCTGCGCAGCATAGGTGAACTCAAGTCTGCTGCCTAC
CACTATGAAGTGGTCAAGAGGGGGATCAACATGTCCCTGGACAAGAGGGA
CCATGAGAGGGAGCTCGTTTCCAAGCTCCTGAGTGAGGCGTACCCGCAGG
TGCTGGACTCTCAAGAGATTGGCAAAGGCTTCCAGCGTCTGTTTGAGATG
ATCGATGACATACAGCTGGATGCACCAGCGGCCCGCCCCCTAGTGGCGTC
CTTCCTGGCTCGCGCTGTTGTGGATGAGATTCTGCCGCCATCCTTCCTCA
GGGACCCCACTATCGCAGGACTGGGCGGAGACATAGTGGAGGGAGCAAGG
CGTCTGCTTTCACGAGACCATGTTCTGAGCCGTGTGGAAAGGGTGTGGGG
ACCTGGCGATGGACGTTCAGTGCAGGAGCTTAAGGTTGCCATTGACCAGC
TGCTGGAGGAGTACCTGATGTCTAGGCAAATGGACGAGGCAATCCAGTGC
GTGCGTGACCTCAACTGTGCGCACTTCCACCACGAGATTGTGAAGCGGGC
CGTCAAGCAGGCCATCGACAAGGGCGAGCAGGACTGCACTGCCATGAGCA
GCCTCCTGGCTCAGCTGCATAGCCTCGAGGTGATCTCCACAGCACAGGTC
GTCATGGGCTTTGACCGGCTCTATGAGCTTGTGCCAGACCTGTTGCTGGA
CATGCCCACTGCGGAGTCCCTGCTGGACAAGTTTGTCAAGCAGGCACAGC
AGGATGGGTGCTTGCCCCAGGACTATGTCAAGCCACCCCCGGCACCCCCT
AAGCCAGTCCGTGAACTTGATGAGGTGGAGGCAGAGCCCTCTGGGGATGT
GGAAGCTTGA
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