|
Homology
BLAST of jgi.p|Trimin1|353294 vs. uniprot
Match: A0A836CJU2_9STRA (Nucleolar protein,Nop52-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJU2_9STRA) HSP 1 Score: 1163 bits (3008), Expect = 0.000e+0 Identity = 735/735 (100.00%), Postives = 735/735 (100.00%), Query Frame = 1
Query: 1 MVRKGGKKRKASEAQQDASDGGSRPQKRQETEDELDVDPTVIDQNSNEVRFGRNLVHVDKRVRDNTVAALRLWLKRRSRXXXXXXSSSGVLSDLDLAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLFVDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAADADDDDDEAPSIYFDMQLVQAFMGIIRDECLLHLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLLTYVTPKAGKAQEGEESXXXXXXAFGAVEPVAIQKALFDIASGETTRERLRSQLYKLVKXXXXXXXXSGPSALAIHAAAVAAGAFDNETSRKERRAAKAAXXXXXXXXXXXGEGSXXGDGEGVQGAPEETPERAGKGPKGKKHKGVPVAGWAAAGIESGEINEGGGNGNAAVRKPKKRKAPLQPSDASDVTEATTXXXXXKKAVAPSTPAADTPGASXXXXXXXXXXQTAASTEKGLSENGAAANAPSTAEFFGAETSPSVPADTIALKFASASGKKHKPKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGEGGTPSPSTPAARGPLQGGKAGASSTGAARKKKVTFGGKEAKDYRKSIKDLQTKPATPAKQTAQPSKGLLKTPVKQGXXXXXQGFGTPTPGTGLGMRGSKTAPRPAGRKRAKDF 2205
MVRKGGKKRKASEAQQDASDGGSRPQKRQETEDELDVDPTVIDQNSNEVRFGRNLVHVDKRVRDNTVAALRLWLKRRSRXXXXXXSSSGVLSDLDLAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLFVDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAADADDDDDEAPSIYFDMQLVQAFMGIIRDECLLHLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLLTYVTPKAGKAQEGEESXXXXXXAFGAVEPVAIQKALFDIASGETTRERLRSQLYKLVKXXXXXXXXSGPSALAIHAAAVAAGAFDNETSRKERRAAKAAXXXXXXXXXXXGEGSXXGDGEGVQGAPEETPERAGKGPKGKKHKGVPVAGWAAAGIESGEINEGGGNGNAAVRKPKKRKAPLQPSDASDVTEATTXXXXXKKAVAPSTPAADTPGASXXXXXXXXXXQTAASTEKGLSENGAAANAPSTAEFFGAETSPSVPADTIALKFASASGKKHKPKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGEGGTPSPSTPAARGPLQGGKAGASSTGAARKKKVTFGGKEAKDYRKSIKDLQTKPATPAKQTAQPSKGLLKTPVKQGXXXXXQGFGTPTPGTGLGMRGSKTAPRPAGRKRAKDF
Sbjct: 1 MVRKGGKKRKASEAQQDASDGGSRPQKRQETEDELDVDPTVIDQNSNEVRFGRNLVHVDKRVRDNTVAALRLWLKRRSRXXXXXXSSSGVLSDLDLAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLFVDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAADADDDDDEAPSIYFDMQLVQAFMGIIRDECLLHLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLLTYVTPKAGKAQEGEESXXXXXXAFGAVEPVAIQKALFDIASGETTRERLRSQLYKLVKXXXXXXXXSGPSALAIHAAAVAAGAFDNETSRKERRAAKAAXXXXXXXXXXXGEGSXXGDGEGVQGAPEETPERAGKGPKGKKHKGVPVAGWAAAGIESGEINEGGGNGNAAVRKPKKRKAPLQPSDASDVTEATTXXXXXKKAVAPSTPAADTPGASXXXXXXXXXXQTAASTEKGLSENGAAANAPSTAEFFGAETSPSVPADTIALKFASASGKKHKPKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGEGGTPSPSTPAARGPLQGGKAGASSTGAARKKKVTFGGKEAKDYRKSIKDLQTKPATPAKQTAQPSKGLLKTPVKQGXXXXXQGFGTPTPGTGLGMRGSKTAPRPAGRKRAKDF 735
BLAST of jgi.p|Trimin1|353294 vs. uniprot
Match: D7FXP8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXP8_ECTSI) HSP 1 Score: 196 bits (497), Expect = 4.440e-49 Identity = 120/318 (37.74%), Postives = 174/318 (54.72%), Query Frame = 1
Query: 136 SNEVRFGRNLVHVDKRVRDNTVAALRLWLKRRSRXXXXXXSSSGVLSDLDLAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLFVDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAAD----------------ADDDDDEAPSI-YFDMQLVQAFMGIIRDECLL--HLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLL-TYVTPKAGKAQEGEESXXXXXXAFGAVEPVAIQKALFDIASGETTRERLRSQLYKL 1029
+NEV+FG++L DKRVRD TV ALR WL++RSR G L+DLDL KIW+GLWYCM+MCDKA VQ+ELA L+ + LF DD +G+RF +F + M+R W R+D R+DK+Y+L+R F RE L +C PA + A++ + A + +D+ L+ A ++ E L P G R+H+ D++ E A G + TE + L PWL + A + RR + +F+ LL + K G +E EE F AVE +Q LF++A+ TR++ R +LY+L
Sbjct: 32 NNEVKFGKHLASSDKRVRDRTVGALREWLRQRSR--------GGSLTDLDLLKIWRGLWYCMFMCDKAPVQRELAENLAGLLRLFKDDRAEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFCCLPPPAVEGQPKQXXXXXXXXNSPAEEAETSAKAGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGADMPTEAFLVALAPWLRVAA------EPETNPVVFRRTFEGVFEGLLGLFPEDKDGMEEEEEEKK-----VFAAVELDRVQACLFEVAAAPQTRDKRRVKLYEL 330
BLAST of jgi.p|Trimin1|353294 vs. uniprot
Match: A0A225WWZ0_9STRA (Ribosomal RNA processing protein 1 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WWZ0_9STRA) HSP 1 Score: 168 bits (426), Expect = 6.750e-41 Identity = 105/297 (35.35%), Postives = 154/297 (51.85%), Query Frame = 1
Query: 148 RFGRNLVHVDKRVRDNTVAALRLWLKRRSRXXXXXXSSSGVLSDLDLAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLFVDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAADADDDDDEAPSIYFDMQLVQAFMGIIRDECLLHLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLLT-YVTPKAGKAQEGEESXXXXXXAFGAVEPVAIQKALFDIASGETTRERLRSQLYKLVK 1035
RFG++L H +K+ RD + L ++L ++ +DL+ K+WK L+YCMWM DK VQ+EL+ L+ + H V L F +F+ M R+W LD R+DKFYSL+R F RE + D +D LVQ F+ I+ E + LPNG RMH+ D++L E+ A G +TTE + +LEP+ LL++ + +T+ +RV + +FDD+LT Y + +E E F VE +Q +F IAS + T ER RS LY L K
Sbjct: 7 RFGQHLAHTEKKYRDRALKKLTVYLTKKQEW-----------TDLEWDKLWKALFYCMWMSDKRPVQEELSTNLAGLVHR-VPTSTGALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVALLRVQD----------------WDEDLVQEFVTILSAEVVSQLPNGLRMHLADVYLTEIYNAAGQDVTTEAFIILLEPFFTLLSS-----EYDKTV--FKRVRELVFDDMLTKYKFGPQSEQEEEETDAEEEDKVFEQVEVAQVQHRIFAIASADDTAERNRSALYTLYK 268
BLAST of jgi.p|Trimin1|353294 vs. uniprot
Match: A0A2P4Y0J0_9STRA (Ribosomal RNA processing protein 1 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y0J0_9STRA) HSP 1 Score: 167 bits (422), Expect = 2.630e-40 Identity = 113/301 (37.54%), Postives = 163/301 (54.15%), Query Frame = 1
Query: 148 RFGRNLVHVDKRVRDNTVAALRLWLKRRSRXXXXXXSSSGVLSDLDLAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLFVDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAADADDDDDEAPSIYFDMQLVQAFMGIIRDECLLHLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLLTYVTPKAGKAQEGEESXXXXXX-----AFGAVEPVAIQKALFDIASGETTRERLRSQLYKLVK 1035
RFG++L H +K+ RD + L ++L ++ +DL+ K+WK L+YCMWM DK VQ+EL+ L+ + H + D L F +F+ M R+W LD R+DKFYSL+R F RE + D +D +LVQ F+ I+ E + LPNG RMH+ D++L E+ A G +TTE + +LEP+ LL++ + +T+ +RV + +FDD+LT K G E +E XXXXXX F VE V +Q +F IAS + T ER RS LY L K
Sbjct: 7 RFGQHLAHTEKKYRDRALKKLTVYLTKKKEW-----------TDLEWDKLWKALFYCMWMSDKRPVQEELSSNLAGLVHR-IPDSTLALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVALLRVQD----------------WDEELVQEFVTILSAEVVSQLPNGLRMHLADLYLTEIYNAAGKDVTTEAFITLLEPFFTLLSS-----EYDKTV--FKRVRELVFDDMLTKY--KFGSQPEKDEEXXXXXXXXXNKVFEQVEVVQVQHRIFAIASADDTAERNRSALYTLYK 270
BLAST of jgi.p|Trimin1|353294 vs. uniprot
Match: H3GJI2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJI2_PHYRM) HSP 1 Score: 162 bits (409), Expect = 1.410e-38 Identity = 110/304 (36.18%), Postives = 162/304 (53.29%), Query Frame = 1
Query: 148 RFGRNLVHVDKRVRDNTVAALRLWLKRRSRXXXXXXSSSGVLSDLDLAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLFVDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAADADDDDDEAPSIYFDMQLVQAFMGIIRDECLLHLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLLTYVTPKAGKAQEGEESXXXXXX--------AFGAVEPVAIQKALFDIASGETTRERLRSQLYKLVK 1035
RFG++L H +K+ RD + L ++L ++ +DL+ K+WK L+YCMWM DK VQ+EL+ L+ + H V + L F +F+ M R+W LD R+DKFYSL+R F RE + D +D ++VQ F+ I+ E + LPNG RMH+ D++L E+ A G +TTE + +LEP+ LL+ G+ +T+ +RV + +F+D+LT K G E E+ XXXXXX F V+ +Q +F IAS + T ER RS LY L K
Sbjct: 7 RFGQHLAHTEKKYRDRALKKLTVYLTKKKDW-----------TDLEWDKLWKALFYCMWMSDKRPVQEELSSNLAALVHK-VPEPEAALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRESVALLRVQD----------------WDEEIVQEFVTILSSEVVSQLPNGLRMHLADLYLTEIYNAAGKDVTTEAFVTLLEPFFTLLS-----GEYDKTV--FKRVKELVFEDMLTKY--KFGPQPEKEDXXXXXXXXXXXXXDKVFELVDVAQVQHRIFAIASADDTAERNRSALYTLYK 273
BLAST of jgi.p|Trimin1|353294 vs. uniprot
Match: W2Q468_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2Q468_PHYPN) HSP 1 Score: 161 bits (407), Expect = 4.670e-38 Identity = 110/304 (36.18%), Postives = 164/304 (53.95%), Query Frame = 1
Query: 148 RFGRNLVHVDKRVRDNTVAALRLWLKRRSRXXXXXXSSSGVLSDLDLAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLFVDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAADADDDDDEAPSIYFDMQLVQAFMGIIRDECLLHLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLLTYVTPKAGKAQEGEESXXXXXX--------AFGAVEPVAIQKALFDIASGETTRERLRSQLYKLVK 1035
RFG++L H +K+ RD + L ++L ++ ++L+ K+WK L+YCMWM DK VQ+EL+ L+ + H + + L F +F+ M R+W LD R+DKFYSL+R F RE + LR D D ++D LVQ F+ I+ E + LPNG RMH+ D++L E+ A G ++TTE M +LEP+ LL++ + +T+ +RV + +FDD+L K G E E+S XXXX F V+ +Q +F IAS + T ER R+ LY L K
Sbjct: 63 RFGQHLAHTEKKYRDRALKKLTVYLTKKKEW-----------TELEWDKLWKALFYCMWMSDKRPVQEELSTNLAGLVHR-IPNAESALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFIRETV-VLLR-----DQDWEED----------LVQEFVTILSTEVVSQLPNGLRMHLADLYLTEIHNAAGKEVTTEAFMTLLEPFFTLLSS-----EYDKTV--FKRVRELVFDDMLAKY--KFGPQSEKEKSDDXXXXXXXXXXDKVFEQVDVAQVQHRIFAIASADDTAERNRAALYTLYK 329
BLAST of jgi.p|Trimin1|353294 vs. uniprot
Match: A0A1V9YSK9_9STRA (Ribosomal RNA processing protein 1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YSK9_9STRA) HSP 1 Score: 160 bits (406), Expect = 6.620e-38 Identity = 101/295 (34.24%), Postives = 151/295 (51.19%), Query Frame = 1
Query: 148 RFGRNLVHVDKRVRDNTVAALRLWLKRRSRXXXXXXSSSGVLSDLDLAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLF-VDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAADADDDDDEAPSIYFDMQLVQAFMGIIRDECLLHLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLLTYVTPKAGKAQEGEESXXXXXXAFGAVEPVAIQKALFDIASGETTRERLRSQLYKL 1029
+FG++L H DK VRD V L L+L ++ +DLDL KIWK L+YCMWM DK ++QQELA L+K+ H F ++L LRF +F+ + R+W +D R+DKFY LIR +G ++ +D QL + F + E L LPNG R+H DI+L EL +A+G + T++++ +LEP+ L+ + T + V Q + +D T + ++ E E F V+ IQ +FDIA+ E T ER R+ LY +
Sbjct: 8 KFGQHLAHTDKYVRDKAVKKLTLFLVKKKEW-----------TDLDLDKIWKALFYCMWMSDKPKIQQELAENLAKLIHSFPTEELK--LRFLHSFFKTIHREWHGIDGLRLDKFYVLIRMMLYQGFKFLEAND------------------WQLTEQFATHLYTEVLSKLPNGLRLHFADIYLTELYKALGQVVETQIMLQLLEPFFKLMTSDA---DKIVTKRVNDLVFQPLLNDYFFQETYEPNESTEPETDDENEPKVFTEVKLAPIQHRIFDIAAAEETLERNRNLLYSI 268
BLAST of jgi.p|Trimin1|353294 vs. uniprot
Match: G4YJ53_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YJ53_PHYSP) HSP 1 Score: 159 bits (402), Expect = 1.380e-37 Identity = 108/305 (35.41%), Postives = 162/305 (53.11%), Query Frame = 1
Query: 148 RFGRNLVHVDKRVRDNTVAALRLWLKRRSRXXXXXXSSSGVLSDLDLAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLFVDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAADADDDDDEAPSIYFDMQLVQAFMGIIRDECLLHLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLLTYVT--PKAGKAQEGEESXXXXXX-------AFGAVEPVAIQKALFDIASGETTRERLRSQLYKLVK 1035
RFG++L H +K+ RD + L ++L +++ +DL+ K+WK L+YCMWM DK VQ+EL+ L+ + H V L F +F+ M R+W LD R+DKFYSL+R F RE + + +D L+Q F+ I+ +E + LPNG RMH+ D++L E+ A G +TTE + ++EP+ LL+ G+ +T+ +RV + +F+D+LT P+ K QE XXXXXX F V+ +Q +F IAS + T ER RS LY L K
Sbjct: 7 RFGQHLAHTEKKFRDRALKKLTVYLAKKTDW-----------NDLEWDKLWKALFYCMWMSDKRPVQEELSSNLAALVHK-VPTAEAALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVALLRVQE----------------WDEDLLQTFVTILSEEVVSQLPNGLRMHLADLYLTEIYNAAGKDVTTEAFITLMEPFFTLLS-----GEYDKTV--FKRVRELVFEDMLTKFKFGPQPEKEQEDXXXXXXXXXXXXXXXKVFEQVDVAQVQHRIFAIASADDTAERNRSALYTLYK 276
BLAST of jgi.p|Trimin1|353294 vs. uniprot
Match: A0A329RYE7_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RYE7_9STRA) HSP 1 Score: 158 bits (400), Expect = 2.020e-37 Identity = 106/304 (34.87%), Postives = 159/304 (52.30%), Query Frame = 1
Query: 148 RFGRNLVHVDKRVRDNTVAALRLWLKRRSRXXXXXXSSSGVLSDLDLAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLFVDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAADADDDDDEAPSIYFDMQLVQAFMGIIRDECLLHLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLLTYVTPKAGKAQEGEESXXXXXX--------AFGAVEPVAIQKALFDIASGETTRERLRSQLYKLVK 1035
RFG++L H +K+ RD + L ++L ++ ++L+ K+WK L+YCMWM DK VQ+EL+ L+ + H + L F +F+ M R+W LD R+DKFYSL+R F RE + D ++ LVQ F+ I+ E + LPNG RMH+ D++L E+ A G ++TTE M +LEP+ LL++ + +T+ +RV + +F+D+LT K G E E+ XXXXX F + +Q +F IAS + T ER RS LY L K
Sbjct: 7 RFGQHLAHTEKKYRDRALKKLTVYLTKKKEW-----------TELEWDKLWKALFYCMWMSDKRPVQEELSTNLAGLVHR-IPSAESALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVALLRDQD----------------WEEDLVQEFVTILSTEVVSQLPNGLRMHLADLYLTEIYNAAGKEVTTEAFMILLEPFFTLLSS-----EYDKTV--FKRVRELVFEDMLTKY--KFGPQSEKEKDDXXXXXXXXXXXSKVFEQFDVAQVQHRIFAIASADDTAERNRSALYTLYK 273
BLAST of jgi.p|Trimin1|353294 vs. uniprot
Match: D0NGX9_PHYIT (Ribosomal RNA processing protein 1 n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NGX9_PHYIT) HSP 1 Score: 156 bits (394), Expect = 4.410e-37 Identity = 103/303 (33.99%), Postives = 156/303 (51.49%), Query Frame = 1
Query: 148 RFGRNLVHVDKRVRDNTVAALRLWLKRRSRXXXXXXSSSGVLSDLDLAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLFVDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAADADDDDDEAPSIYFDMQLVQAFMGIIRDECLLHLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLLTYVTPKAGKAQEGEESXXXXXX-------AFGAVEPVAIQKALFDIASGETTRERLRSQLYKLVK 1035
RFG++L H +K+ RD + L ++L +++ ++L+ K+WK L+YCMWM DK VQ+EL+ L+ + H + L F +F+ M R+W LD R+DKFYSL+R F RE + D ++ +LVQ F+ I+ E + LPNG RMH+ D++L E+ A G +TTE M +LEP+ LL +RV + +F+++LT A +E ++ XXXXXX F V+ +Q +F IAS + T ER R+ LY L K
Sbjct: 7 RFGQHLAHTEKKYRDRALKKLTVYLTKKTEW-----------TELEWDKLWKALFYCMWMSDKRPVQEELSTNLAGLVHR-IPTAESALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVVLLRDQD----------------WEEELVQEFVTILSTEVVSQLPNGLRMHLADLYLTEIHNAAGKDVTTEAFMTLLEPFFTLL-------NSEYDKTVFKRVRELVFEEMLTKYKFGAQPEKEKDQXXXXXXXXXXXXDKVFEQVDVAQVQHRIFAIASADDTAERNRAALYTLYK 274
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
ProteomeId | Trimin1|353294|estExt_Genemark1.C_Ctg_1550008 |
BRITE | ko00000,ko01009,ko03009 |
KEGG ko | ko:K14849 |
GOs | GO:0000785,GO:0000791,GO:0000792,GO:0001652,GO:0003674,GO:0003712,GO:0003713,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005730,GO:0006139,GO:0006355,GO:0006357,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009615,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010563,GO:0010604,GO:0010628,GO:0010921,GO:0010923,GO:0010941,GO:0010942,GO:0016070,GO:0016072,GO:0019219,GO:0019220,GO:0019222,GO:0022613,GO:0030684,GO:0030687,GO:0030688,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032991,GO:0034260,GO:0034470,GO:0034641,GO:0034660,GO:0035303,GO:0035305,GO:0035821,GO:0042254,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043087,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043484,GO:0043900,GO:0043902,GO:0043903,GO:0043921,GO:0043923,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0045893,GO:0045935,GO:0045936,GO:0045944,GO:0046483,GO:0046782,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048524,GO:0050434,GO:0050789,GO:0050790,GO:0050792,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051174,GO:0051252,GO:0051254,GO:0051336,GO:0051346,GO:0051702,GO:0051704,GO:0051707,GO:0051817,GO:0051851,GO:0052312,GO:0052472,GO:0060255,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0098586,GO:0140110,GO:1901360,GO:1902680,GO:1903506,GO:1903508,GO:1990904,GO:2000112,GO:2001141 |
Preferred name | RRP1B |
Description | rRNA processing |
COG category | S |
Max annot lvl | 2759|Eukaryota |
EggNOG OGs | KOG3911@1|root,KOG3911@2759|Eukaryota |
Evalue | 7.29e-50 |
Seed ortholog | 2880.D7FXP8 |
Hectar predicted targeting category | other localisation |
Ec32 ortholog description | Nucleolar, Nop52 |
Ec32 ortholog | Ec-28_001580.1 |
TranscriptId | 353616 |
Track | FilteredModels1 |
ProteinId | 353294 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_15832 ID=mRNA_15832|Name=jgi.p|Trimin1|353294|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2207bp|location=Sequence derived from alignment at Contig_155:67893..81626- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.
ATGGTCAGGAAAGGAGGCAAGAAGCGCAAAGCCAGCGAGGCGCAACAGGA CGCCAGCGATGGCGGCTCAAGGCCTCAAAAGCGGCAGGAGACGGAGGATG AGCTTGATGTAGACCCCACTGTGATTGATCAGAACAGCAATGAGGTGCGG TTTGGGCGCAACCTGGTGCACGTGGACAAGCGCGTGCGCGACAACACGGT GGCAGCGCTCAGGCTGTGGCTGAAGCGGCGCAGCAGGCTGTGGCTGAAGC GGCGCAGCAGCAGCGGCGTTCTGAGCGATCTTGACCTGGCCAAGATCTGG AAGGGCCTCTGGTACTGCATGTGGATGTGCGACAAGGCGGAGGTGCAGCA GGAGCTGGCGGTTACGCTGTCTAAGATGACGCACCTCTTTGTGGATGATC TCAACGACGGCCTGCGCTTTCAGGCCACCTTCTACATCATGATGCGACGG CAATGGGGCCGTCTGGACTACTACCGCGTTGACAAGTTCTACAGCCTCAT CCGCTGCTTTTTCAGGGAGGGGCTGCGGTACTGCTTGCGGAGCGATCCTG CAGCTGACGCCGATGATGATGACGATGAAGCACCTAGCATCTACTTTGAC ATGCAGCTGGTGCAGGCGTTCATGGGCATCATACGCGATGAATGCCTGTT GCACCTGCCCAATGGCTACAGGATGCACATGGTGGACATCTTTCTGCCAG AGCTCAAGGAGGCCGTTGGTCCTCAGCTGACAACAGAGGTCCTCATGGCC ATGCTGGAGCCATGGCTTGCGCTGTTAGCAGCAGGGGGCATACCAGGGCA AGGGGCGGAGACCTTAGCGTTTCACAGGCGCGTCCATCAGAGAATATTCG ACGACCTCCTGACATATGTCACGCCCAAGGCAGGCAAAGCTCAGGAAGGC GAGGAGTCGCCTGAGGCTGCGGAGGCAGCATTTGGGGCTGTGGAGCCTGT GGCCATCCAGAAGGCGCTGTTTGACATTGCCTCTGGCGAAACCACACGCG AGAGGCTGCGCAGCCAACTCTACAAGCTCGTCAAGAGCCAGGTCTACAGG CTCGTCAAGAGCGGGCCAAGCGCTCTGGCCATCCACGCAGCGGCGGTGGC AGCAGGGGCCTTCGACAATGAGACAAGTCGCAAAGAGCGGCGAGCAGCCA AGGCGGCAGAGCGCGCAGCAGCGGCAGCAGAGTCTGATGACGGCGAAGGG TCAGACGATGGCGATGGCGAAGGGGTGCAGGGCGCGCCCGAAGAGACACC CGAGAGGGCAGGGAAGGGTCCAAAGGGTAAGAAGCACAAGGGGGTGCCTG TGGCTGGGTGGGCGGCAGCGGGGATAGAATCGGGCGAGATCAACGAAGGT GGAGGCAACGGCAACGCCGCCGTGCGCAAGCCCAAGAAGCGCAAGGCTCC GCTGCAACCTTCAGATGCCTCAGATGTGACAGAGGCCACAACAACCGCGG CACCGGCAAAAAAGGCGGTTGCGCCTTCCACCCCTGCCGCTGACACGCCT GGCGCCAGCAAAAGCAGCAAGAAGAAGCGCAAGAAGCAGCAGACTGCTGC CAGCACCGAGAAAGGTCTTTCCGAGAACGGTGCTGCCGCAAACGCGCCCT CCACTGCAGAATTTTTTGGCGCAGAGACGTCTCCTTCAGTACCAGCCGAC ACCATCGCGCTCAAATTCGCCAGCGCCAGTGGCAAGAAGCACAAGCCAAA GGCCGCGCCATCACCGGCTGCAATGGCGGCAGCAGCAGCGCCAGCGGCGG CGGCGGCGTCTCCTGCTGTGACCCCGGCCAAGTCGGCCGGCGGTTCTGGC AAGACGAAGAAAGAAGCTTCCTCGGATAAGAAGAAGCAGAAGAAGGAGAA CAAGTCCCCGGGGGAGGGGGGTACTCCGTCCCCTTCCACACCTGCCGCGC GTGGGCCACTGCAGGGGGGAAAAGCGGGGGCTTCATCAACGGGGGCAGCG CGTAAGAAGAAGGTCACATTTGGAGGGAAAGAGGCCAAAGACTACCGCAA GTCCATCAAGGATCTGCAGACCAAGCCTGCGACGCCTGCTAAGCAAACTG CCCAGCCTAGCAAAGGCCTGCTCAAGACGCCAGTCAAGCAGGGCGCAACG CCGGCCAAACAGGGGTTTGGAACGCCGACTCCAGGGACAGGGTTGGGCAT GCGTGGCTCCAAGACAGCACCACGGCCAGCGGGGCGGAAACGTGCGAAGG ACTTCTT back to topprotein sequence of jgi.p|Trimin1|353294 >Trimin1|353294|estExt_Genemark1.C_Ctg_1550008 ID=Trimin1|353294|estExt_Genemark1.C_Ctg_1550008|Name=jgi.p|Trimin1|353294|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=735bp
MVRKGGKKRKASEAQQDASDGGSRPQKRQETEDELDVDPTVIDQNSNEVR FGRNLVHVDKRVRDNTVAALRLWLKRRSRLWLKRRSSSGVLSDLDLAKIW KGLWYCMWMCDKAEVQQELAVTLSKMTHLFVDDLNDGLRFQATFYIMMRR QWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAADADDDDDEAPSIYFD MQLVQAFMGIIRDECLLHLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMA MLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLLTYVTPKAGKAQEG EESPEAAEAAFGAVEPVAIQKALFDIASGETTRERLRSQLYKLVKSQVYR LVKSGPSALAIHAAAVAAGAFDNETSRKERRAAKAAERAAAAAESDDGEG SDDGDGEGVQGAPEETPERAGKGPKGKKHKGVPVAGWAAAGIESGEINEG GGNGNAAVRKPKKRKAPLQPSDASDVTEATTTAAPAKKAVAPSTPAADTP GASKSSKKKRKKQQTAASTEKGLSENGAAANAPSTAEFFGAETSPSVPAD TIALKFASASGKKHKPKAAPSPAAMAAAAAPAAAAASPAVTPAKSAGGSG KTKKEASSDKKKQKKENKSPGEGGTPSPSTPAARGPLQGGKAGASSTGAA RKKKVTFGGKEAKDYRKSIKDLQTKPATPAKQTAQPSKGLLKTPVKQGAT PAKQGFGTPTPGTGLGMRGSKTAPRPAGRKRAKDF back to topmRNA from alignment at Contig_155:67893..81626- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_15832 ID=mRNA_15832|Name=jgi.p|Trimin1|353294|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=13734bp|location=Sequence derived from alignment at Contig_155:67893..81626- (Tribonema minus UTEX_B_3156 ) ATGGTCAGGAAAGGAGGCAAGAAGCGCAAAGCCAGCGAGGCGCAACAGGA
CGCCAGCGATGGCGGCTCAAGGTGAGGGGCTGTAAACGACACACTATATG
CGAAGCGCCAAAGCCAGATGCCTTCACTATCAAGTGAATTGAAGCGCGAT
GAAGCTGCGACTCGCACATTATCTTCATAGCCTTGCAACTCTACGATACT
TGCGGCGTCAGAGGACGAGACTTAGCTGCTTGTTGAAGGCGTCGTGAAGG
TGTATTTAGTTTCTTTGGCACCTGTGTGGGCCATAGCCACGCTTTTCTGG
CTGAAGTACTACCATCATAACCACCTGCGCATTTCAAGTCAGACCTGCTA
CATTAGCCTTCAAATGACAGGTCAAAAGGAAATTAGAGGGGAAGTGCGTG
CGTGCCAGGTAGACCTTTGCTGAACGAGAGCGTGTGACTGCGCTGCAGAC
GCTGCAGCAGCAGCATATGGCGTTCCAGGCATTTTCGCAGGTAATGATTA
TTGCGCAAGTGGTATCAGGGAGCTTGGTGGTTGTCATGATGTACGCAACA
AAAAGGAACGGCAGCAGCAGCAGCAGCAGCACCTGTCATGCCATGCTCAA
CTCTCATTTGACTGTATGCGCAATATCTGAGCCACAAGCTATCAATCACA
AGATTGCTATTGGCCCTGAGAGCAGCATGGCTCGACATCAGCGCAGCTGC
TGTAGTAGCTGCAGCTCCCTCAAATTTTGTTGTTTGCCTCAAAATGACAA
ACTTCAACAATGCTTGGGGCGGTTCATTTGCATCTATGGGGCAGAGCCCT
CAGTTGGCAAGTGCAAAGATGGCGGCAGCGGCAGGCAACAGCAGTACCAG
CGCAAAGCAGCTGCAGCAGCAGCGGCAAGCAGAAGCACAGCCAAGTCACA
AAGGCAGTGGCGAAGCTCTGCCACGTTTGTGTCATTGCTCAGAGACGACA
ACCCTCACTTGGCAATCAGCTTTAGCATGAGTTGCCGTCCATGGTCGTCC
AAGACTCTAACCTTGACGAGGCAGCAAAAAAGTGTAAGCAAGGGGTCGCC
ATTGAGATTAACTCCATCAAGAATCGTGCAGCGTAGCATGGCTAGTGCAT
GGCGAGACCAAGCGGTGCTCTCTCAACATCAAATGCGTCAGTTTTAATGA
TTGATTTCACTACATGAACTCCTGAACCTCCACCTTCAATAACTAATGAG
CAAGCCTGCGGTATGACAGTAGGCGAAATCATGTTTTCGTAGCTTTGTAA
ACTCATGAGTCCAACTGTTTGCGCACAAGTATGTCTGTCCTACAAGCAGC
GGAAGGCACTGAGCTGTTGAAGGCACTGAGCTGTTGCTCATGTGTATTGC
CAGCCAAACATCCACAGCCATGAGCAAGGTTCACAACGTAGCTGTTGACA
GCTGCAACAGCAGGGTACGTTGTTGATGCATTTTTGCACGCTGGCAAGAT
AGTTCCCTGCGAGCAACAACGTGCACATCTGCGTCCCTTTACATGGTTGC
TTCTCGCCCTGAAGCACATCTGTCAGACCTGCGAATTGGACAGCAATGGA
GCTCTACACTCACCCAACGTTGATGACCATACCTTAAACTTCAACTCATT
GGCGCCCTTTATTTCTTGCCCTGGCGCTAATTTGGCGTCACATGTTGACC
AATCATATTAATCTCAAGCAGGGCTGCCCTCATAAGCTACAGCACAGACA
GCAAAAATCAGCGAAGTTGCCCCGGTGTGATGGATCACAATCTGACCTGA
AATCATGACCGTCCGTTGTCCCAAGTACCAGCAACTAAAGTCAATGGACC
TTCACCCATGCAGCTCCATGCACATACCAATCCATACGTACATACCCTCA
TCTTGCGCGCTGCAGGCCTCAAAAGCGGCAGGAGACGAAAGGTGGCTTGA
ATGTAGACCCCACTCCGATCGATCAATGCAGCATACCAATCCATACATGC
GTACCCTCATCTTGCCTGCCACAGGCCTCAAAAGCGGCAGGAGACGGAGG
ATGAGCTTGATGTAGACCCCACTGTGATTGATCAGAACAGCAATGAGGTG
CGGTTTGGGCGCAACCTGGTGCACGTGGACAAGCGCGTGCGCGACAACAC
GGTGGCAGCGCTCAGGTATGCATGTATGCCAGCCGCACTAATAACCCTGT
TGTATGCCAGCCGCACTAACCCTACCCTAACCCTATGCCGAACACTGTGG
CAGCGCTCAGGTATGTATGTATGTATGTATGTATATATGCCAGCCTCGCT
GACCCTATTATTAGGGCTTGCTGTTATACTACAGTGCTGTTACACCAGAG
GGCTTAGAGTTCATGCGCCCATACTCTGCAATCCGAACTGATGCACATCG
CTTGCACACACATTCCACTTTTTGCTGGTTGCTCAACGTTGCTCTTGTGC
ACAAGATTGACAAACCTCTTGGCTTTACGGCGCATCGACCCAGTCAATGA
GGGTATGTAGTGCCGTGCCTGTAGTGGAGCTCAAAATTCGAGGTGTATTG
CGCCTGATGTGCAGCAGCAAACCCCTTACCCTCACCATACATAGCAACCA
TACATAGCTAGCCTACAAGTCCTGACGTGCTGCCTTCAATCATTGCGATT
AAAGTTAGGGTGAGAATTAGCGTTGCGGCTAGGGTTAGGGTCACAGTCTG
AGCCATCACTGCTCCTAGCAAACTCTACCAATTTATACTGTCCCATGTCA
CGACCCTGGGCTTTGGTTTTAAGTTGCGTAGCAGCAGTGGTCCTCCACAG
CCATCTTCATCTGGCCAAATCTCTTCCTGAAGTCCTGCCAAAGAGCCTCT
GCCAACACGCATCTGTCGACTTGCATTGTATGCACTGCTTTGACTGGAAA
GTCACCTTGCTTCACGGCAATCAGCCATTGCATACCAACCTCATACAACG
CTACATACATACCTACCCTCTGCATCCAATACCTACCCCCCAGGCTGTGG
CTGAAGCGGCGCAGCAGGTAGCGGCGTTCTGAGCGATCTCGACCTGGCCA
AGTTCGACTTGCATGTATGCACTGTTTTGACTGGAAAGTCACCTTGCTTC
ACGACAATCAGCCATTGACGTTCCACCCCCTAACAACGCCACATACCTAC
ATACCCTCTGCATCCAATACCTACCCCCCCAGGCTGTGGCTGAAGCGGCG
CAGCAGCAGCGGCGTTCTGAGCGATCTTGACCTGGCCAAGATCTGGAAGG
GCCTCTGGTACTGCATGTGGATGTGCGACAAGGCGGAGGTGCAGCAGGAG
CTGGCGGTTACGCTGTCTAAGATGACGCACCTCTTTGTGGATGATCTCAA
CGACGGCCTGCGCTTTCAGGCCACCTTCTACATCATGATGCGACGGTGAG
ACCGCATACCACTACATGTATATGTACATACATACAGTACGTTCATTATA
TCAGCTTTAACTAGTAACTGGCCTCAATGGCATCTGAAGGCTCGGGGGGG
AGTTGCTGCAGTGTGCAGCGCACGGCTTTGTTTGCATCATACTCTGACTC
TCATATGCTTATACACTTTGATATGTGAAGTACAATGGTGACAGGTTGAG
TGCCTGGGTTACGTGCTGATGTGTTGCCCTAAGCCACCCCAGCCCTAACC
CTAACCCTAACCCTTGGTGTGTGCATCAGCGTGCCGCAGAGGGGTTTGGC
GGCACTTTGAGGCTCAGACACCGCATGTGCGTTCTGTGTAGTGGCTATTC
AGACGAGCAAGTGGGACTGAAGGAACCTTCAGTAGTGAACTTCAACAAGT
GCACATCACCTATCTCTTCTCTGCATCAAGTACTTTGCATGCTGAAAGAG
CTTATCCTCGGCCGCAGGCCAGAATTACACCCTTCAAGTATGCATTGAGA
ATGATTTTCAAAGAGAGAAGCACTCAGTTCTACTGTTTGTAAGTACTGGA
ATGTCTGTAGACTCTGGTTACATCTAATTCTACTGCAGTAGTCACATTCA
TGTCTAGACTACTCTTGAGAAACTTTTGTCTGATGAATATACTTTGCTCT
GACATTTGCAGGCAATGGGGCCGTCTGGACTACTACCGCGTTGACAAGTT
CTACAGCCTCATCCGCTGCTTTTTCAGGTCAGACTTTGCAATATCCTGTG
GGTCACGCTGACATGGCAGTGCCTCCTGGTGCTGTTAAAAACTTGTTTGT
GTACACAATTGCACCTGTGTAGTTTGTAATGTTTTACGTGTGTGAACTGC
ACGCGAGCACTGTTAACATTAAGTAGGCGGACAGGGAAATAAGGTGGACC
AACTAGATTATGTTTCTTACCGCGCGTTGTCACACGCAGCGAAAGGGTAT
CCAACAACCATGGACTGAATCAGGAAAATTTTCAACAAAGGAAGTGCTTT
GAACGCATGAATGCTGTGTAGAAGTGGAGAAGGGGACGCAATCAGGCCAG
CATAGCAAATGACTGGTGTAGGGTGTATGTGCTGACAGAACTGCACTACT
GTTTGTTGATGAATTCATATTTGTCGATGCAGCCATGTAAATCAGTTCAT
TGTTGTGAACACGGAGGGGCTACGGTTCTGCTTGCGATGCGATGCACACT
GCTGGACTGTGACGTCCATTCATGTATGTCGACCATCTTGTCACTGCCAC
CTTCGCTTTGAAGTGATGGGAATGTAGGATGCGCAGATGCAGCAACTAAT
GAGTTCATGTTTGATGTTGGCCGCAGTTGTGAATGAAATCGTGTTTGTTG
TTGGCAGGGAGGGACTGCGGCACTGCTTATTGATGCATTTCTATCTGCAC
ATGAAAGCTTGTTGATGATTTCAATGTTGTTGAAAGAACAAGGAGGTACT
GCAGTTCTGCTTGTGAATGAATTCATTTCTACTCATGATATCAACTTTGA
TGAATTCATTATGCTGAACTTGTGTTGTACAGGGAGGGGCTGCGGTACTG
CTTGCGGAGCGATCCTGCAGCTGACGCCGATGATGATGACGATGAAGCAC
CTAGCATCTACTTTGACATGCAGCTGGTGCAGGCGTTCATGGGCATCATA
CGCGATGAATGCCTGTTGCACGTGAGTCACGCTGAGCACTACTTGAGGTT
AACTAACCTTAACCCTAGCCCTAACTTTCTGACTCTAAGAGCACTACTCA
GGGTTAATCAACCTCAAGTACTTCACCATTCGCGACGAATGCCTGCTGCA
CGTGAGTGACGCTGAGCACTAGTTAAAGTTGTTTAACCTTGACCCCTAAC
CTTAATTCTAACGCAATCTAACCCTAAAAGGCACTACTTAGGGTCAACTA
AGCTTGAGTAATTCACCGCAATGTTTCGATGGATGCGCAGTCAGTGTTAC
TGTACAGGTAGGACCGGGGCTAGAGTTGCGGCTGCGGCATTGAATTCGGT
TGCCGTCACACTGTGAGGTCCTTCTCCGTCACCCTTCTGCCCCTGCAGAG
TAGTCCAACCTGAGCTTGCTGCTCGTTGAGTTGTACACAGGCATTGTAGA
AGCGGCATATGAGTATCGATCATCGACATGACAGCTACTGCTCTTGCAGC
TGTTTCACAGCAGGGACTGTGGCTATCGACAACGAATCAGCAAGCTGTCA
AGCTTTCGTACTACTGCCGTTGCGTCGTGTGTGTTTTGAACAGGGTTTAG
GCTAGCCCCTAACCCTACCCCTTGAAACCTGTGCCTCGTGGTGGAATGAA
ACTGCATCGGTGCTACGGGCATGCTTGTGCGGCTTGTGCTTCACTGTGTA
CGTATACGTTGTACAGTGTACTGTACTCAGGCCACAGTACAGTGTACCGA
CCACAGTACAGATCCGTCTCAGCAACTTACTCACTCTATGAATCATTGCA
CTCACCAATCTTTGTAACTGCAGCTGCGGCATGGCTGCAGACTGCAACTG
ATTGATCCCCTGTCTCATCTGATGTCATTACTGCACACATACGCAACTAG
ACTACTCATGCACTCAATGACTTGCTCTTGCACACAACTACTCGCGTCAC
TGTCGCACACACACGGCTGTTGCAGCTGCCCAATGGCTACAGGATGCACA
TGGTGGACATCTTTCTGCCAGAGCTCAAGGAGGCCGTTGGTCCTCAGCTG
ACAACAGAGGTCCTCATGGCCATGCTGGAGCCATGGCTTGCGCTGTTAGC
AGCAGGGGGCATACCAGGTACATATGTTTAGGATTAGGGTTAGCGTGATG
ATTTAGGGTTAGGTCAGGTTTAGGGTTAGCCACACCACCATCACACCTAC
CCAGATTCAAACTTCAAGCCGCAACCCTACCACGTCTAGCCTGCATCCCC
TGCGACCATGACTAAAAATCGCAGTTGCAGAATCACTTGACGTTTGTCAC
CACCGCTACTGCACTCCGCGTACATACCGCACAGGGTATCAACATCAAAG
CAGTGATGGCATCTTTGCAGGATCGCAGCAGTACTGCGCTCTTTTGATAC
TTCAAGTACTTGAACTAGACCCAACCAAGTATACAGCTACGTACCTCCAG
GCATACATGAGTAACCGGATCTAAAGCAGTGGTAATGGGTGCATCAGTCG
TTTCTGAAGACATTCTAAAGACATTCACGGCATAACCGTGAACAACTTGC
AGCTCATGTGCGTGCATGGTTGTAACCAATGTGAAACAGTCAAACCTGTA
ATGAACAAATCACCAGCGCTACAGTAGCAGGATGTAATGCACGTTGCGTT
ATGCACGTCCTCCTTACGTGTGTAGACGATTTGCTGCTGCGCAGCAGCAG
TAAATGCGTGGCTGCGCGTGCTCTCATCATGTGTGTCTGGTACTGTTACT
GCATGCATGCACGATGTTACTCCAACTGTTCTTGTCACATATTATTCCTC
TGAGCAATGCCACGCATCTGTACTGAATGCGCGCACTACAGGGCAAGGGG
CGGAGACCTTAGCGTTTCACAGGCGCGTCCATCAGAGAATATTCGACGAC
CTCCTGACATATGTCACGCCCAAGGCAGGCAAAGCTCAGGAAGGCGAGGA
GTCGCCTGAGGTGAGCTTCCTTACCCTAACGTTAACCCTACCCTAAGTGG
GCCCTGAAGTATGCTTCCGAAGTACATACATACCTCAAGCATGAACTTGT
AGCCGCTCATGCTGTTCTAGTGGTGTCGGGGTCATGACGGCCTTAGGCAC
AGGCTCATGCTGCTCATAGGCACAGCTTGATGGGGGTATTGGTGGGCCTC
AAGTACCTACATACCTTGAGCACGAACTTGTAGACTCCACTGAGCACGAA
CTTGTAGACTCCAGTGCTAGTGCTGTTGTAGTGATATCTGGTGCATGGCG
AGCATATACGCACTGGACCTGGATGCTGACAGGACAGGGCAGCCAAGGCG
GCGTAGACTCGCGTCAAGCACGCCCCTATCTTCCCTTTTTTAGTTGGCAA
GCTCTGCAGTCAGGCCTGAATGCCCCTTATAGTCCAATTGAAGCAGTCGT
GCTGACTGCACAGCTTACCATTCGAGGTTGAGGCGTGCTTCTGGCGGGGC
ATTGCCACCGACTCTATGGCCACCCTCTGCGCATGCGGGTGCTGTGCGAA
TGTATACATACATACGCAGCCCAAAAGGCAGCAGTGCTCCAGGCAGCTGT
GCTCTCTGCCTTCTGTGTCCATTCCGCAAAGGCGTTGCTTGACTCAGCAC
CTACCAGTGAAAGACAGTCTGAAGTTCTAGTAGTCAAAGTTGTGAGTGTT
GATCGAGTGCTCATGCCCTGGCGAGCACCGAATGATGACTCGTGCGTGCT
TCTTTGAAGTATGATTGCTGTCTTGGGCCCCGTTAGTGCGCTCGCCGCAA
ACTTCAACTTGAAGTACGTATCAGCCTTGCATCCCAACTCTGCCATGTTG
CACCTTCCACTTGCCAGCAATGCACGGAAACCGCATTGATTTGTGCTGTT
ATGTTGTCCTCATCTCTTTCAAGGCTGCGGAGGCAGCATTTGCTTTCTAC
TTGAACTACATGTCAGCAAATTTCACCGCAACGCTGTCATGCCGTGCCAT
CCACTTGCCAGCAGTAATCGTGTACTAATTGGTGCCTTATTCTGTCCTTG
CCTGTTCCAAGGCTGCGGAGGCAGCATTTGGGGCTGTGGAGCCTGTGGCC
ATCCAGAAGGCGCTGTTTGACATTGCCTCTGGCGAAACCACACGCGAGAG
GCTGCGCAGCCAACTCTACAAGCTCGTCAAGAGGTGAGCCAAATAGAAGT
AGGAGCTTATTAGGGCCATCATGGAAGCTTTGACATAGCCTCTGGCGAAG
CGACTGCGCAGCCAGGTCTACAGGCTCGTCAAGAGGTGAGCCCATTTGTG
ATTATTTGAGCCATTATGGAAGCCTGAAGTGCTGCTGGCTTGCGCGTTGG
TGCTGGGGGCACTTGTTGGTTTATGTCTGTACTGCATGGTACGGCCAGCT
CCTCTTGCTAGCGCCACAACCGCGATGCCCCTCTGTGCTGTTGCCTGCTT
CTTCTTATCTCAGACGTCACTACGTCGCAACTTGATTGGAATCTTTGAGT
TTGTGTCTTGAATCTGGTGCTCCAATGCTGACTCTTGTTGATGTGCAACA
GCGAGCAGCCAAGGGCAGACCAAGTAGGCAGAGAGCGCCTGCTGAGCCAC
TTGTGGCCTGCAGCAATCATATCGTGAAGATAAATTTTGTATGTCTCAGC
AGCGGAAGTGCCAGGTGGCACATGTCATGAGCTTTGCAGTGGCCCTTTGG
CACATGATAGTGCCAACAGCTATCAGACAGGGTTTGCCGCACACTTGTTT
CCGATGAACTTCAAATCGGAGTCGTTGGTTAGACCTGGGTCTTTCCCGCA
TTACTCGGCTGGCTTCCTAACCCTGAGTGTGCATCATCCCTGTGCCAACT
TCAAATGCAGGTATCAGGCCTTAACAGGTGCAGAGGGCAGCGGTGCCGAA
GCATGCACCTGGCAGCCCGCCGTGCCTCTTGCAAGGTATGTATGCCTGTA
CGCAATGCTAACCTTAACCCTGCATCTGCGCCTGAGACATCATCATGACA
TTTATTAACAGCAGTGCTCACCGCCACCAGCACCAGCAACCTGCTTCCAA
AATAGCACTCACAGCGCAACAGTGGCAGTGCTCATTCCCGAGGTCATGGA
GTATGAGGGTCAGGGTTAGGGTTAGGGTTAGGGTATGCATGTATTGATGG
CAGCGCTCATCATGGTTAGACTTTAAATAGTCAGGGGGCAATGCTCAGCG
TGATGACAGCAGTGCTCATCAAGCCAGCAGCAGCATCAGCGCTCATCACA
CCACAAAACGCACACTCACGGCAGTGCTCATATTGCGGATGGCAGCACTC
GGTACTGTGGCTGCGCTAGGCCTCCTGCGTGGGCAGGAAGCTAAATTACG
TTCACATCTGCATTCACAAGGGTCAGGGCTAGGTTAGCTCTGATGATGGT
GTTTGCAAGAGTAGGTGTTGAAATGCTGTGAGGGGTTGTCAACTGCCAAT
GCAGATGCAAGCACCTTTGGCTGCATTGCAGCCACAGTGGCATGAACGAT
GCATGTGCTCGATCCTCACCACCTTGTTGCCTGTTTTGTTGCAGCTGCAG
TAGCAGCAGTATCTGTGTTGTCGCCACCGCGTGCGCGCCCGCCGCTATTC
AGCGGGCACACACGTGTATCGTCGTACCAGCAGGAGCTCGATGCACGTGC
TAAACCCTAACCCTGGTTGTTGCCTATTCGGTTGGACGTTTCAATGGCTG
ACATTATCTGTGTTATTGCCACCGCGTGTGCACCCAAAACTCAGCGGGCC
AAGCGCTCTGGCCATCCACGCAGCGGCGGTGGCAGCAGGGGCCTTCGACA
ATGAGACAAGTCGCAAAGAGCGGCGAGCAGCCAAGGCGGCAGAGCGCGCA
GCAGCGGCAGCAGAGTCTGATGACGGCGAAGGGTCAGACGATGGCGATGG
CGAAGGGGTGCAGGGCGCGCCCGAAGAGACACCCGAGAGGGCAGGGAAGG
GTCCAAAGGGTAAGAAGCACAAGGGGGTGCCTGTGGCTGGGTGGGCGGCA
GCGGGGATAGAATCGGGCGAGATCAACGAAGGTGAGGCAGTACATGAGCC
ATCAGTGCTAAGCATGAGCATGTGTTGATATTGTCAATGAGTGCAGGTAT
GCAGTGAAGAAGAGGTATGTGGTGGGCGGCGGCGGGGATAGAGGCGGGCG
AGATTAACGAGGGTGAGGCAGGGCGCAGTGCATGTGTCATCAGTGCTCAA
CGACAGCATGTGTTGAGATTGCTGATGAGTGCATGCGTGCAGTGAAGCAG
AGGTGTGCGGTCGGCGGCAGCGGGAATAGAGTCGGGCGAGATCATTGAGG
GTAAGGCAGTGCTCAGTGTGAGCATGTGTTGAGATTGTTGATGAGTTAGG
GTCATGAACCTTTGTTAAACCCAGTGGTGAGTTGTCAGTTTTGCAGCATC
CTCGGCAAATGTTTACTTTGAAAGTATAAGAGTATGTCATATGTGGCTAT
CGTTCACTGACCTTAAACTCCAAGCGTCGCATCAGCTGACTGCTGCTTAT
GCTGTATACCATACTATATCACCAGGTGGAGGCAACGGCAACGCCGCCGT
GCGCAAGCCCAAGAAGCGCAAGGCTCCGCTGCAACCTTCAGATGCCTCAG
ATGTGACAGAGGCCACAACAACCGCGGCACCGGCAAAAAAGGCGGTGAAA
CCAGCGGATACAGCAACCCCTCTTCAGGAGCATGTCCAGACCAGCACCCC
TGCAAGACCATTATCGGCTAAAAAAGCGCGGAAGATGAGCGCTACCAAGG
AAGGTTCCCCTGCAGAACGGTCTTCAGAGGCGCCGGTCGCGGCTGCGGCA
GTTGCCAGCACGAATTCCACGGGAGCTTCGAAAAAGAGCCAGAAGAAGCA
GTCTGGTGCTTCAGCAGCTGCTCCTAGTGGCGATGCTGCTTCTGGTGCTG
CTGCTGTTGCTGCTGCGGAGGTTGCGCCTTCCACCCCTGCCGCTGACACG
CCTGGTGAGTGTCTGGCCATTGTTAACGATGGTACTTGTACAGTCATTTC
CTTGCACTTCAATACAGCCATTGCTGGCAGCACCTGTAATTCATGTCATG
TGGTGTTTGATGAAGATAACACAGAAGAATTAAACAGGGAGGAATTTGAT
TGCAGCAAGGCAGCAACAGCATGTGTTTGTATTGTGTGCTGGCAGTGGTG
GTGGCATTATTGCTGCTGCTGCCACCTCCGCTGCTGCAGCTGCTTCTGCC
GCTGCTGCTGACAGGGCTGCTTCCACCACTGCTCATTGCAAGAGAGGGCC
AGTTTCTTGCTCATGTGTGTTTGGTGGCATAATCCATACCTGTTTTCTTA
CATACCCATATACTTCCAAGTATACGCACTGCATTTGCTGTTGATTCACA
CATTGCTGCCCTGACTCTATCTGATGTGCTGCTTCACAGGCGCCAGCAAA
AGCAGCAAGAAGAAGCGCAAGAAGCAGCAGACTGCTGCCAGCACCGAGAA
AGGTCTTTCCGAGAACGGTGCTGCCGCAAACGCGCCCTCCACTGCAGAAT
TTTTTGGCGCAGAGACGTCTCCTTCAGTACCAGCCGACACCATCGCGCTC
AAATTCGCCAGCGCCAGTGGCAAGAAGCACAAGCCAAAGGCCGCGCCATC
ACCGGCTGCAATGGCGGCAGCAGCAGCGCCAGCGGCGGCGGCGGCGTCTC
CTGCTGTGACCCCGGCCAAGTCGGCCGGCGGTTCTGGCAAGACGAAGAAA
GAAGCTTCCTCGGATAAGAAGAAGCAGAAGAAGGAGAACAAGTCCCCGGG
GGAGGGGGGTACTCCGTCCCCTTCCACACCTGCCGCGCGTGGGCCACTGC
AGGGGGGAAAAGCGGGGGCTTCATCAACGGGGGCAGCGCGTAAGAAGAAG
GTCACATTTGGAGGGAAAGAGGCCAAAGGTGAGCATGATGTGCTCTGATA
GTGATTTGGTGGCGACGTTGTAATGCGCTGAGTAAGCGCGTTTATGCAGA
TCAGCAAAGGGGTGGTAAGGTGGCCTCACCGGGCTGTGCATGCAGATGGT
GATTTGAGTTCATTGCTTCATCGACAGCGGTCAAAGGCGCAACACAATGC
TCCAACACAACACAGCGCTTTGCCTTGACGACAGGAGGTCCAAAGTGAGA
CAGGGTGATTTGGCTGCTTTTGACAACGCGCTGGCTTGAAAGGGCTGGTG
CATGCCAGCTTTGATATGTAGGGGAGCATCTCATCAGGCTCTGTAAGCAG
GAGTAAGAGTGTCATCCTGTCAGCTGATCTGTTGTGCCTATGTAGTGATT
TAAGTGCTCACACACTTACCGGGCAACGCTTGGAGTTAGGCGGCTTTGGT
TATTGATGTGCTGCCTAGAAGGATTTGCTTTTATGCAGGCAAGGGCGACC
AAAGTGCCACTACCACCATTATGTCCGAAATGTTGCGCCTGGCATCTACT
ATCGAGGGGCGGCCATCATGCCTACATGGGTGTTTGCAATTTTGGCATAC
AAAGGGAAGGGTTTTGGCTGGCTTTCACCTCTGACGTCAAGAACACTGAG
GTTGAAGTTTGCAGCCATGTTGCATTCACATCCTATTTTTTTGGGGTCAG
CAATAACAATGCGCCGTCGGTTGAGCGAAACGAAGACAACTAACAAACCC
CATGAAGGTGAGTGCATGGCGGATATACCTGATTGATTGTCAGATTGCTG
TGGGTTAGAGATCAAAAGCGGTATCGCGCATTCCAGGCAAGGGTCGCACT
GCGGCAAACGTTGGCTGTGCCAACCAATCCTGCCACTCACACCTTCAATC
AATCCTTCACGTCCATCGCTTAACTGTCACAGACTACCGTCACACTGCGG
GAAACGTTGTCTGTGCCAAACAATCCTGCCACTCACACCTGCAATCAATT
CCTTCACCTCGATCACTTAACTTCAATCACTTGTATGTAACTGTCACAGA
CTACCGCAAGTCCATCAAGGATCTGCAGACCAAGCCTGCGACGCCTGCTA
AGCAAACTGCCCAGCCTAGCAAAGGCCTGCTCAAGGTGCGTGCGAGCAAT
CGGAAACTGGGAGATCGAGCTACTTCTACTTGAAGTTTGCAGTAAAGACA
GTGCCCGGAGCAGTGGAGACTCTTGCGGCTTGCGAAGCTGGACATGCCCG
AGCGCGCGTTTGGCCACACAGGGCGCGCGGACGCTGCAGTTCATCCATTA
CAAAACACACGCACAACATACGCGCAAACAGCACACCTGGTGGCATGAGG
AGTGTAGAACACTGATTAGGCCGCACAAGGTTCTAGCACTTCTATCCAAT
AGCATGGCAACATCACCACGGCAAATCGCAGCTTGCAGCTAGAAAGGAAC
TCTTGTCGGTCAAGAATATATTGGCATCATTGACAGCGACTGCTTGTCCC
ACAACATGCAATGTGTGAAGTGCAGAATCATCTGCCCTCGTTGCGGAAAA
ACGTTTCATGAAGCTGAACCGCAAAGTCGCTGCTCTGAATAGCATGTTGC
GAACGGGCGAAACAACGGGCGGCATCTGGTTTGCCTGTCACACGGTGGCA
CAAACACAAACGCCTTTTTTGACATCCCTCTGAGTCATGGTCACTGACTG
CATGCTGCAACTGTTTAAAGAGGCGCCTCACTAACCGCCAAATGCGTCGA
CCTCCCCTCCTCACCACTCACACATGCACGACCGCTACTTGCTGGCTCTG
CAGACGCCAGTCAAGCAGGGCGCAACGCCGGCCAAACAGGGGTTTGGAAC
GCCGACTCCAGGGACAGGGTTGGGCATGCGTGGCTCCAAGACAGCACCAC
GGCCAGCGGGGCGGAAACGTGCGAAGGACTTCTT back to topCoding sequence (CDS) from alignment at Contig_155:67893..81626- >mRNA_15832 ID=mRNA_15832|Name=jgi.p|Trimin1|353294|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2205bp|location=Sequence derived from alignment at Contig_155:67893..81626- (Tribonema minus UTEX_B_3156 ) ATGGTCAGGAAAGGAGGCAAGAAGCGCAAAGCCAGCGAGGCGCAACAGGA CGCCAGCGATGGCGGCTCAAGGCCTCAAAAGCGGCAGGAGACGGAGGATG AGCTTGATGTAGACCCCACTGTGATTGATCAGAACAGCAATGAGGTGCGG TTTGGGCGCAACCTGGTGCACGTGGACAAGCGCGTGCGCGACAACACGGT GGCAGCGCTCAGGCTGTGGCTGAAGCGGCGCAGCAGGCTGTGGCTGAAGC GGCGCAGCAGCAGCGGCGTTCTGAGCGATCTTGACCTGGCCAAGATCTGG AAGGGCCTCTGGTACTGCATGTGGATGTGCGACAAGGCGGAGGTGCAGCA GGAGCTGGCGGTTACGCTGTCTAAGATGACGCACCTCTTTGTGGATGATC TCAACGACGGCCTGCGCTTTCAGGCCACCTTCTACATCATGATGCGACGG CAATGGGGCCGTCTGGACTACTACCGCGTTGACAAGTTCTACAGCCTCAT CCGCTGCTTTTTCAGGGAGGGGCTGCGGTACTGCTTGCGGAGCGATCCTG CAGCTGACGCCGATGATGATGACGATGAAGCACCTAGCATCTACTTTGAC ATGCAGCTGGTGCAGGCGTTCATGGGCATCATACGCGATGAATGCCTGTT GCACCTGCCCAATGGCTACAGGATGCACATGGTGGACATCTTTCTGCCAG AGCTCAAGGAGGCCGTTGGTCCTCAGCTGACAACAGAGGTCCTCATGGCC ATGCTGGAGCCATGGCTTGCGCTGTTAGCAGCAGGGGGCATACCAGGGCA AGGGGCGGAGACCTTAGCGTTTCACAGGCGCGTCCATCAGAGAATATTCG ACGACCTCCTGACATATGTCACGCCCAAGGCAGGCAAAGCTCAGGAAGGC GAGGAGTCGCCTGAGGCTGCGGAGGCAGCATTTGGGGCTGTGGAGCCTGT GGCCATCCAGAAGGCGCTGTTTGACATTGCCTCTGGCGAAACCACACGCG AGAGGCTGCGCAGCCAACTCTACAAGCTCGTCAAGAGCCAGGTCTACAGG CTCGTCAAGAGCGGGCCAAGCGCTCTGGCCATCCACGCAGCGGCGGTGGC AGCAGGGGCCTTCGACAATGAGACAAGTCGCAAAGAGCGGCGAGCAGCCA AGGCGGCAGAGCGCGCAGCAGCGGCAGCAGAGTCTGATGACGGCGAAGGG TCAGACGATGGCGATGGCGAAGGGGTGCAGGGCGCGCCCGAAGAGACACC CGAGAGGGCAGGGAAGGGTCCAAAGGGTAAGAAGCACAAGGGGGTGCCTG TGGCTGGGTGGGCGGCAGCGGGGATAGAATCGGGCGAGATCAACGAAGGT GGAGGCAACGGCAACGCCGCCGTGCGCAAGCCCAAGAAGCGCAAGGCTCC GCTGCAACCTTCAGATGCCTCAGATGTGACAGAGGCCACAACAACCGCGG CACCGGCAAAAAAGGCGGTTGCGCCTTCCACCCCTGCCGCTGACACGCCT GGCGCCAGCAAAAGCAGCAAGAAGAAGCGCAAGAAGCAGCAGACTGCTGC CAGCACCGAGAAAGGTCTTTCCGAGAACGGTGCTGCCGCAAACGCGCCCT CCACTGCAGAATTTTTTGGCGCAGAGACGTCTCCTTCAGTACCAGCCGAC ACCATCGCGCTCAAATTCGCCAGCGCCAGTGGCAAGAAGCACAAGCCAAA GGCCGCGCCATCACCGGCTGCAATGGCGGCAGCAGCAGCGCCAGCGGCGG CGGCGGCGTCTCCTGCTGTGACCCCGGCCAAGTCGGCCGGCGGTTCTGGC AAGACGAAGAAAGAAGCTTCCTCGGATAAGAAGAAGCAGAAGAAGGAGAA CAAGTCCCCGGGGGAGGGGGGTACTCCGTCCCCTTCCACACCTGCCGCGC GTGGGCCACTGCAGGGGGGAAAAGCGGGGGCTTCATCAACGGGGGCAGCG CGTAAGAAGAAGGTCACATTTGGAGGGAAAGAGGCCAAAGACTACCGCAA GTCCATCAAGGATCTGCAGACCAAGCCTGCGACGCCTGCTAAGCAAACTG CCCAGCCTAGCAAAGGCCTGCTCAAGACGCCAGTCAAGCAGGGCGCAACG CCGGCCAAACAGGGGTTTGGAACGCCGACTCCAGGGACAGGGTTGGGCAT GCGTGGCTCCAAGACAGCACCACGGCCAGCGGGGCGGAAACGTGCGAAGG ACTTC back to top
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