mRNA_15419 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|179845
Unique NamemRNA_15419
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|179845 vs. uniprot
Match: A0A836CHP3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHP3_9STRA)

HSP 1 Score: 669 bits (1726), Expect = 3.300e-241
Identity = 387/387 (100.00%), Postives = 387/387 (100.00%), Query Frame = 1
Query:    1 MEVAKSSSGNSELIRQGAMVTLVIQNSALALFMRYSRSAAREGPMYAATTAVVCAEVVKVAMSLLLQTKEDGGVAAMARTLHRDIFTQPVEMLKMSIPACLYCLQNNLAYVAVSHLDGPTYQLLYQLKILTTAMFSVAMLKKALGVHQWVSLFLLALGVGMVQLSGSSXXXXXXXXXXXXXXXXXXXXXXTHQNSLVGLVAVIAACMTSGFAGVYFEKVLKTSKVSIWVRNIQLAGYGMFIGLGGVYMGPEGASVMERGFLYGYTWAVWVAVLLNSLGGLIVAVVVKYADNVVKGFATSISILMTCVVSYFLFNFSINAQFLAGAVTVLYATYLYGQARGPALPRPLVRLLCXXXXXXXAGAGGDLDRLLPLFDGNGKAKEQEASSA 1161
            MEVAKSSSGNSELIRQGAMVTLVIQNSALALFMRYSRSAAREGPMYAATTAVVCAEVVKVAMSLLLQTKEDGGVAAMARTLHRDIFTQPVEMLKMSIPACLYCLQNNLAYVAVSHLDGPTYQLLYQLKILTTAMFSVAMLKKALGVHQWVSLFLLALGVGMVQLSGSSXXXXXXXXXXXXXXXXXXXXXXTHQNSLVGLVAVIAACMTSGFAGVYFEKVLKTSKVSIWVRNIQLAGYGMFIGLGGVYMGPEGASVMERGFLYGYTWAVWVAVLLNSLGGLIVAVVVKYADNVVKGFATSISILMTCVVSYFLFNFSINAQFLAGAVTVLYATYLYGQARGPALPRPLVRLLCXXXXXXXAGAGGDLDRLLPLFDGNGKAKEQEASSA
Sbjct:    1 MEVAKSSSGNSELIRQGAMVTLVIQNSALALFMRYSRSAAREGPMYAATTAVVCAEVVKVAMSLLLQTKEDGGVAAMARTLHRDIFTQPVEMLKMSIPACLYCLQNNLAYVAVSHLDGPTYQLLYQLKILTTAMFSVAMLKKALGVHQWVSLFLLALGVGMVQLSGSSXXXXXXXXXXXXXXXXXXXXXXTHQNSLVGLVAVIAACMTSGFAGVYFEKVLKTSKVSIWVRNIQLAGYGMFIGLGGVYMGPEGASVMERGFLYGYTWAVWVAVLLNSLGGLIVAVVVKYADNVVKGFATSISILMTCVVSYFLFNFSINAQFLAGAVTVLYATYLYGQARGPALPRPLVRLLCXXXXXXXAGAGGDLDRLLPLFDGNGKAKEQEASSA 387          
BLAST of jgi.p|Trimin1|179845 vs. uniprot
Match: A0A835ZHJ8_9STRA (UDP-N-acetylglucosamine transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHJ8_9STRA)

HSP 1 Score: 390 bits (1002), Expect = 1.160e-131
Identity = 211/328 (64.33%), Postives = 250/328 (76.22%), Query Frame = 1
Query:   40 IRQGAMVTLVIQNSALALFMRYSRSAAREGPMYAATTAVVCAEVVKVAMSLLLQTKEDGGVAAMARTLHRDIFTQPVEMLKMSIPACLYCLQNNLAYVAVSHLDGPTYQLLYQLKILTTAMFSVAMLKKALGVHQWVSLFLLALGVGMVQLSGSSXXXXXXXXXXXXXXXXXXXXXXTHQNSLVGLVAVIAACMTSGFAGVYFEKVLKTSKVSIWVRNIQLAGYGMFIGLGGVYMGPEGASVMERGFLYGYTWAVWVAVLLNSLGGLIVAVVVKYADNVVKGFATSISILMTCVVSYFLFNFSINAQFLAGAVTVLYATYLYGQARGP 1023
            IR  A+V+LV+QN++LAL +RY   AA EGPMYAATTAVVCAEV+KVA+SLLLQT+ED GVA +  TL RDI  QPVE+LKM +PA L+CLQNNLAYVA+++LDGPTYQLL QLK+LTTAMFSV ML +AL  HQW+SL LLA GVG+VQLS +                         +NS+ GLV V+ AC++SGFAGVYFEKVLKTS VSIWVRNIQL  YG  IGL GVY GP+  +V + GFL GYT  VW  VL NSLGGLIVAVVVKYADNV+KGFATSI+IL+TC++SYFLF+F++ AQFL G   VLY+T+LY Q   P
Sbjct:    6 IRTVALVSLVVQNASLALLIRY---AAVEGPMYAATTAVVCAEVIKVALSLLLQTQEDKGVAGLLHTLKRDILQQPVEVLKMGVPAALFCLQNNLAYVAIANLDGPTYQLLSQLKLLTTAMFSVTMLNRALAGHQWLSLCLLACGVGLVQLSTAGGEAKRD------------------ENSVTGLVCVLLACVSSGFAGVYFEKVLKTSTVSIWVRNIQLGVYGTVIGLAGVYFGPDATAVAQYGFLNGYTGVVWAGVLSNSLGGLIVAVVVKYADNVIKGFATSIAILVTCIISYFLFSFTVTAQFLLGGALVLYSTHLYSQVHHP 312          
BLAST of jgi.p|Trimin1|179845 vs. uniprot
Match: A0A835Z583_9STRA (Nucleotide-sugar transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z583_9STRA)

HSP 1 Score: 382 bits (981), Expect = 1.340e-128
Identity = 212/347 (61.10%), Postives = 253/347 (72.91%), Query Frame = 1
Query:    1 MEVAKSSSGNSELIRQG---AMVTLVIQNSALALFMRYSRSA-AREGPMYAATTAVVCAEVVKVAMSLLLQTKEDGGVAAMARTLHRDIFTQPVEMLKMSIPACLYCLQNNLAYVAVSHLDGPTYQLLYQLKILTTAMFSVAMLKKALGVHQWVSLFLLALGVGMVQLSGSSXXXXXXXXXXXXXXXXXXXXXXTHQNSLVGLVAVIAACMTSGFAGVYFEKVLKTSKVSIWVRNIQLAGYGMFIGLGGVYMGPEGASVMERGFLYGYTWAVWVAVLLNSLGGLIVAVVVKYADNVVKGFATSISILMTCVVSYFLFNFSINAQFLAGAVTVLYATYLYGQARGPAL 1029
            M  A+ S  N +  RQ    A+VTLV+QNSALAL MRYSR    +EG +YAA+TAVVCAEVVKVA SLLLQ K+D  +  + +T+ RDIF QP +  KM++PA LYC+QNNLAY+A+S+LD PTYQLLYQ+KILTTA FSV +L  AL   QW SL +L  GVG+VQL+ +S                        QNS++GL AV AAC+TSGFAGVYFEKVLK S VSIW+RN+QLAGYG  IGL GVY GP+  +V+E GFLYGY W VW AVLLNSLGGL+VAVVVKYADNVVKGFATSISILMT + S   FNF+ N +F+AGA  V+Y+TYLYGQ R  +L
Sbjct:    1 MTAAEKSLKNYQTKRQVQAIALVTLVVQNSALALLMRYSRRVPVKEGSLYAASTAVVCAEVVKVAASLLLQLKDDRDLRGLWQTVKRDIFCQPWDTQKMAVPAALYCMQNNLAYIAISNLDSPTYQLLYQMKILTTATFSVTLLGHALNAQQWASLCMLVAGVGLVQLTQNSTARSSYSSSGGSSSEFA-------QNSMMGLAAVAAACVTSGFAGVYFEKVLKASNVSIWIRNMQLAGYGAAIGLAGVYAGPDARAVVEHGFLYGYNWKVWGAVLLNSLGGLVVAVVVKYADNVVKGFATSISILMTSIFSLVFFNFNFNIRFMAGAAMVIYSTYLYGQLRRRSL 340          
BLAST of jgi.p|Trimin1|179845 vs. uniprot
Match: D7FPV6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV6_ECTSI)

HSP 1 Score: 325 bits (834), Expect = 5.000e-105
Identity = 199/352 (56.53%), Postives = 262/352 (74.43%), Query Frame = 1
Query:   34 ELIRQGAMVTLVIQNSALALFMRYS-----RSAAREGPMY----AATT----------------AVVCAEVVKVAMSLLLQTKEDGGVAAMARTLHRDIFTQPVEMLKMSIPACLYCLQNNLAYVAVSHLDGPTYQLLYQLKILTTAMFSVAMLKKALGVHQWVSLFLLALGVGMVQLSG-SSXXXXXXXXXXXXXXXXXXXXXXTHQNSLVGLVAVIAACMTSGFAGVYFEKVLKTSKVSIWVRNIQLAGYGMFIGLGGVYMGPEGASVMERGFLYGYTWAVWVAVLLNSLGGLIVAVVVKYADNVVKGFATSISILMTCVVSYFLFNFSINAQFLAGAVTVLYATYLYGQ 1011
            E +R   ++TLV+QNSA A+FMRYS     +    EG M     A T+                AV+ AE+ K+A S+LLQ ++DG V  + +TL  D++ +PVE+LKM++PACLY +QNNL YVA+S+LDGPT+QLLYQLKILTTA+FSV MLK+ L + QW +L +LALGVG+VQ+S  SS    XXXXXXXXXXXXXXXXX + QN L+GLV V+ AC TSGFAGVYFEKVLK + VS+WVRN+QL+G+G+ +G G V+   +G +V E GF YGY +AVW+A+LLNS+GGL+VA+VVKYADNV+KGFATS+SI++T ++S+FLF F I+  F+ GA  VL++T+LY Q
Sbjct:    4 EAVRGAILLTLVVQNSAQAIFMRYSFKPKSQCGGGEGNMPSRRPAVTSQVEERGQRSRVRRPRPAVMMAELCKLACSILLQYRDDGSVRHVVKTLREDVWEKPVELLKMAVPACLYVVQNNLNYVAISNLDGPTFQLLYQLKILTTALFSVVMLKRVLHMKQWGALAMLALGVGLVQVSSNSSKSSGXXXXXXXXXXXXXXXXXGSGQNPLLGLVMVLLACCTSGFAGVYFEKVLKGTSVSLWVRNMQLSGFGILLGAGCVWF-KDGQAVSENGFFYGYNYAVWMAILLNSMGGLVVAMVVKYADNVIKGFATSVSIVLTALISFFLFEFQISVMFVIGAYFVLHSTFLYSQ 354          
BLAST of jgi.p|Trimin1|179845 vs. uniprot
Match: A0A7S2RGH9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RGH9_9STRA)

HSP 1 Score: 291 bits (745), Expect = 1.350e-92
Identity = 165/321 (51.40%), Postives = 220/321 (68.54%), Query Frame = 1
Query:   52 AMVTLVIQNSALALFMRYSRSAAREGPMYAATTAVVCAEVVKVAMSLLLQTKEDGGVAAMARTLHRDIFTQPVEMLKMSIPACLYCLQNNLAYVAVSHLDGPTYQLLYQLKILTTAMFSVAMLKKALGVHQWVSLFLLALGVGMVQLSGSSXXXXXXXXXXXXXXXXXXXXXXTHQNSLVGLVAVIAACMTSGFAGVYFEKVLKTSKVSIWVRNIQLAGYGMFIGLGGVYMGPEGASVMERGFLYGYTWAVWVAVLLNSLGGLIVAVVVKYADNVVKGFATSISILMTCVVSYFLFNFSINAQFLAGAVTVLYATYLYGQA 1014
            +++ LV+QNSALAL MRYSR+   +GP+Y A+TAVV  EV+K  +SL L  +E+     +   L   +F  P++ L++ +PA LY +QNNLAY A+S+LD  TYQLLYQLKILTTA+FSV +L ++LG  QW SL +L +GVG+VQ S                         + +NS VGL+AV+AAC +SG AGVYFEKVLK SK S+W+RN+QL+  G+ +G   V+   +   V+E GF YGY   VW  VLL +LGGL+VA+VVKYADN++KGFATSISIL++CV SYFLFNF +N +FL GA  VLYA +L+  +
Sbjct:   51 SLMVLVVQNSALALTMRYSRT--MDGPLYLASTAVVVCEVLKFFVSLGLLIREEE--KPVVELLFDRVFNNPMDFLRLMVPAGLYTVQNNLAYFAMSNLDAATYQLLYQLKILTTAIFSVVLLGRSLGKWQWCSLCVLCMGVGLVQTSSMKQDAD------------------SKENSFVGLLAVLAACCSSGAAGVYFEKVLKGSKTSLWIRNVQLSCIGVVLGFIPVWKDKD--VVLEHGFFYGYNNVVWAVVLLQALGGLLVALVVKYADNILKGFATSISILISCVTSYFLFNFEVNPKFLFGATLVLYAVFLFSSS 347          
BLAST of jgi.p|Trimin1|179845 vs. uniprot
Match: A0A6P4YE82_BRABE (UDP-galactose translocator-like isoform X1 n=9 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4YE82_BRABE)

HSP 1 Score: 285 bits (730), Expect = 2.020e-90
Identity = 154/326 (47.24%), Postives = 219/326 (67.18%), Query Frame = 1
Query:   52 AMVTLVIQNSALALFMRYSRSAAREGPMYAATTAVVCAEVVKVAMSLLLQTKEDGGVAAMARTLHRDIFTQPVEMLKMSIPACLYCLQNNLAYVAVSHLDGPTYQLLYQLKILTTAMFSVAMLKKALGVHQWVSLFLLALGVGMVQLSGSSXXXXXXXXXXXXXXXXXXXXXXTHQNSLVGLVAVIAACMTSGFAGVYFEKVLKTSKVSIWVRNIQLAGYGMFIGLGGVYMGPEGASVMERGFLYGYTWAVWVAVLLNSLGGLIVAVVVKYADNVVKGFATSISILMTCVVSYFLFNFSINAQFLAGAVTVLYATYLYGQARGPAL 1029
            ++V LV+QN++L L MRY+R+    G M+ +TTAVV AEV K+   +L+   +  G  A  + L+ ++F  P++ LKM++PA +Y LQNNLAYVA+S+L   T+Q+ YQLKI+TTA+FS+ ML K++   QWVSLFLL  GV  VQL  +                       T QN L+GL+AV+ +C++SGFAGV+FEKVLK S  S+W+RNIQLA + + +GL  ++   +GA V E+GF Y Y W  W+ V + + GGL+VAVVVKYADN++KGFATS SI+++C+ S +LF+F I AQF  GA  V+++ YLYG+   P +
Sbjct:   24 SLVILVVQNASLILTMRYART--MPGDMFFSTTAVVMAEVFKLLGCVLIIMCQYVGFRACTQHLYEELFQNPMDSLKMAVPALVYTLQNNLAYVAISNLSAATFQVTYQLKIMTTALFSIVMLGKSISRLQWVSLFLLFAGVSAVQLESTGATSSGKATGEKVE---------TEQNPLLGLIAVVVSCISSGFAGVFFEKVLKGSVASVWIRNIQLAFFSILLGLVSMWT-KDGAGVSEKGFFYAYNWVTWMTVCMQAFGGLLVAVVVKYADNILKGFATSFSIILSCIASVYLFSFHITAQFAFGASLVIFSIYLYGRPSRPTV 337          
BLAST of jgi.p|Trimin1|179845 vs. uniprot
Match: A0A7M7PLR5_STRPU (Uncharacterized protein n=5 Tax=Echinacea TaxID=7674 RepID=A0A7M7PLR5_STRPU)

HSP 1 Score: 283 bits (724), Expect = 8.100e-90
Identity = 154/318 (48.43%), Postives = 213/318 (66.98%), Query Frame = 1
Query:   64 LVIQNSALALFMRYSRSAAREGPMYAATTAVVCAEVVKVAMSLLLQTKEDGG--VAAMARTLHRDIFTQPVEMLKMSIPACLYCLQNNLAYVAVSHLDGPTYQLLYQLKILTTAMFSVAMLKKALGVHQWVSLFLLALGVGMVQLSGSSXXXXXXXXXXXXXXXXXXXXXXTHQNSLVGLVAVIAACMTSGFAGVYFEKVLKTSKVSIWVRNIQLAGYGMFIGLGGVYMGPEGASVMERGFLYGYTWAVWVAVLLNSLGGLIVAVVVKYADNVVKGFATSISILMTCVVSYFLFN-FSINAQFLAGAVTVLYATYLYG 1008
            L++Q + L L MRYSR+   EGP Y ++TAVV AE +K+   +LL   ++GG  +   ++ +  +I   P++ LK++IPA LY LQNNL ++A+SHLD  TYQ+ YQLKILTTAMFSV ML K L   +W+SL LL  GV +VQ+   S                      +  + L+GL+AV+ AC +SGFAGVYFEK+LK +K S+W+RNIQLA +G+  GLGGV +G +G+ V E GFL GY    W  V+L +LGGLI+A V+KYADN++KGFATS+SI+++ V+SY+L N F+  + F  GA  V+ AT+LYG
Sbjct:   22 LIVQTTTLVLTMRYSRTVESEGPRYLSSTAVVMAECMKIVACILLVYFQEGGRTIEGFSKVIREEIINSPMDCLKLAIPAGLYTLQNNLLFLALSHLDAATYQVTYQLKILTTAMFSVFMLGKQLNASKWISLILLMAGVALVQMPSESKPKEEEEH--------------SMSSELIGLIAVLCACFSSGFAGVYFEKILKGTKQSLWLRNIQLAFFGVIFGLGGV-IGKDGSKVAENGFLQGYCMITWSVVILQALGGLIIAAVIKYADNILKGFATSLSIILSTVISYYLLNDFTPTSYFFIGAAFVISATFLYG 324          
BLAST of jgi.p|Trimin1|179845 vs. uniprot
Match: A0A672T205_SINGR (UDP-N-acetylglucosamine transporter-like n=13 Tax=Cyprinidae TaxID=7953 RepID=A0A672T205_SINGR)

HSP 1 Score: 283 bits (725), Expect = 1.260e-89
Identity = 159/340 (46.76%), Postives = 222/340 (65.29%), Query Frame = 1
Query:   16 SSSGNSELIRQGAMVTLVIQNSALALFMRYSRSAAREGPMYAATTAVVCAEVVKVAMSLLLQTKEDG-GVAAMARTLHRDIFTQPVEMLKMSIPACLYCLQNNLAYVAVSHLDGPTYQLLYQLKILTTAMFSVAMLKKALGVHQWVSLFLLALGVGMVQLSGSSXXXXXXXXXXXXXXXXXXXXXXTHQNSLVGLVAVIAACMTSGFAGVYFEKVLKTSKVSIWVRNIQLAGYGMFIGLGGVYMGPEGASVMERGFLYGYTWAVWVAVLLNSLGGLIVAVVVKYADNVVKGFATSISILMTCVVSYFLF-NFSINAQFLAGAVTVLYATYLYGQARGPAL 1029
            S S  S  ++  ++  LV+Q ++L L MRYSR+   +GP Y A++AVVCAEV+K+A  +LL  +E    V A+ R L  +I  +P+  LK++IP+ +Y LQNNL YVA+S+LD  TYQ+ YQLKILTTA+FSV+ML K LG++QW+SL +L  G+ +VQ                           T  + L+GL+AV+ AC +SGFAGVYFEK+LK SK S+W+RNIQL  +G+  GLGGV+   +G  V E G   GY    W  V L +LGGL++A V+KYADN++KGFATSISI+++ ++SYFL  +F   + F  GA+ V+ AT+LYG    PA+
Sbjct:   34 SMSSTSSRLKYVSLGVLVLQTTSLVLTMRYSRTLQSDGPRYLASSAVVCAEVLKIAACMLLVFREHSFSVRALNRVLKEEIINKPLLTLKLAIPSGIYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFSVSMLGKILGIYQWLSLVILMTGIALVQWPAE-------------VTSSTKQEDLTAGSQLMGLLAVLVACFSSGFAGVYFEKILKESKQSVWIRNIQLGLFGLIFGLGGVFA-YDGERVQENGLFQGYNHVTWTVVALQALGGLVIAAVIKYADNILKGFATSISIILSTLISYFLLEDFDPTSVFFLGAMLVIAATFLYGYESTPAV 359          
BLAST of jgi.p|Trimin1|179845 vs. uniprot
Match: UPI001CF46CA6 (LOW QUALITY PROTEIN: UDP-galactose translocator-like n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF46CA6)

HSP 1 Score: 283 bits (724), Expect = 1.780e-89
Identity = 154/320 (48.12%), Postives = 217/320 (67.81%), Query Frame = 1
Query:   52 AMVTLVIQNSALALFMRYSRSAAREGPMYAATTAVVCAEVVKVAMSLLLQTKEDGGVAAMARTLHRDIFTQPVEMLKMSIPACLYCLQNNLAYVAVSHLDGPTYQLLYQLKILTTAMFSVAMLKKALGVHQWVSLFLLALGVGMVQLSGSSXXXXXXXXXXXXXXXXXXXXXXTHQNSLVGLVAVIAACMTSGFAGVYFEKVLKTSKVSIWVRNIQLAGYGMFIGLGGVYMGPEGASVMERGFLYGYTWAVWVAVLLNSLGGLIVAVVVKYADNVVKGFATSISILMTCVVSYFLFNFSINAQFLAGAVTVLYATYLYGQ 1011
            +++TL +QN++L L +RYSR+    G MY  TTAVV AE++KV  SLL+   + G V      L+  I  QP + LK+SIPA +Y +QNNL Y+A+S+LD  T+Q+ YQLKILTTA+FSV ML K L   QWVSL +L  GV +VQL  ++                        QN  +GLVAVI +C+ SGFAGVYFEK++K S+ S+W+RNIQL  YG  IG+ G+Y+  +G  + ++G L+GY+  VW+ + + + GGL+VAVVVKYADN++KGFATS +I+++CVVS +LF+F +++QFL GA  V+ A +LYG+
Sbjct:   37 SLITLTVQNASLILTIRYSRTL--PGDMYITTTAVVFAEILKVLASLLILLLQKGSVRDWLHFLYSSIIGQPFDTLKLSIPALIYTVQNNLQYIAISNLDAATFQVTYQLKILTTALFSVFMLSKNLVKLQWVSLVMLFAGVSIVQLQPTNLSLNKTNPSDSEKAQVT-------QNPFLGLVAVIMSCLCSGFAGVYFEKIVKGSQTSVWLRNIQLGIYGTIIGIAGMYI-KDGEKISDKGILFGYSTVVWIVIFMQAFGGLLVAVVVKYADNILKGFATSFAIILSCVVSVYLFSFQLSSQFLFGAGLVILAIFLYGR 346          
BLAST of jgi.p|Trimin1|179845 vs. uniprot
Match: V4AN80_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4AN80_LOTGI)

HSP 1 Score: 281 bits (719), Expect = 2.580e-89
Identity = 155/331 (46.83%), Postives = 225/331 (67.98%), Query Frame = 1
Query:   52 AMVTLVIQNSALALFMRYSRSAAREGPMYAATTAVVCAEVVKVAMSLLLQTKEDGGVAAMARTLHRDIFTQPVEMLKMSIPACLYCLQNNLAYVAVSHLDGPTYQLLYQLKILTTAMFSVAMLKKALGVHQWVSLFLLALGVGMVQLSGSSXXXXXXXXXXXXXXXXXXXXXXTHQNSLVGLVAVIAACMTSGFAGVYFEKVLKTSKVSIWVRNIQLAGYGMFIGLGGVYMGPEGASVMERGFLYGYTWAVWVAVLLNSLGGLIVAVVVKYADNVVKGFATSISILMTCVVSYFLFNFSINAQFLAGAVTVLYATYLYGQARGPALPRPLV 1044
            ++V L++QN+AL L MRY+R+  + G MY ++TAVV +E+ K+    ++   ++GGV    + L  DI   P++ +K+S+P+ +Y +QNNL Y+AVS+LD  T+Q+ YQLKILTTA+FSV ML+KA+   QW+SL +L +GV +VQL   +                        QN  VGLVAVI +C+ SGFAGVYFEK+LK ++ S+W+RNIQL+  G+ IGL  + +  +GA V E+GF +GYTW VW+ + L S GGLIVAVVVKYADN++KGFATS SI+++C+VS + F+F ++ QF+ GA  V+ A Y+Y  ++    P+PLV
Sbjct:   10 SLVALILQNAALILVMRYTRT--QHGDMYLSSTAVVMSEMCKLLTCCVIIIYQEGGVGQFVKMLKTDIIDCPLDCVKVSVPSIIYTIQNNLLYLAVSNLDAATFQVTYQLKILTTAIFSVFMLEKAVAKLQWLSLVVLFVGVSIVQLQPKTSEKSVSQNLA--------------QNPFVGLVAVIISCVLSGFAGVYFEKILKGTRQSVWIRNIQLSVLGIVIGLITMEL-KDGAKVTEKGFFFGYTWFVWLVIFLQSFGGLIVAVVVKYADNILKGFATSASIVLSCIVSVYFFDFHLSIQFVIGASLVMVAVYMY--SKFVPKPKPLV 321          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|179845 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CHP3_9STRA3.300e-241100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZHJ8_9STRA1.160e-13164.33UDP-N-acetylglucosamine transporter-like protein n... [more]
A0A835Z583_9STRA1.340e-12861.10Nucleotide-sugar transporter-domain-containing pro... [more]
D7FPV6_ECTSI5.000e-10556.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2RGH9_9STRA1.350e-9251.40Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6P4YE82_BRABE2.020e-9047.24UDP-galactose translocator-like isoform X1 n=9 Tax... [more]
A0A7M7PLR5_STRPU8.100e-9048.43Uncharacterized protein n=5 Tax=Echinacea TaxID=76... [more]
A0A672T205_SINGR1.260e-8946.76UDP-N-acetylglucosamine transporter-like n=13 Tax=... [more]
UPI001CF46CA61.780e-8948.13LOW QUALITY PROTEIN: UDP-galactose translocator-li... [more]
V4AN80_LOTGI2.580e-8946.83Uncharacterized protein n=1 Tax=Lottia gigantea Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_202contigContig_202:39208..43384 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|179845|e_gw1.202.82.1
KEGG TC2.A.7.12
BRITEko00000,ko02000
KEGG koko:K15272
Descriptionpyrimidine nucleotide-sugar transmembrane transporter activity
COG categoryEG
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0697@1|root,KOG2234@2759|Eukaryota
Evalue8.19e-106
Seed ortholog2880.D7FPV6
Hectar predicted targeting categoryother localisation
TranscriptId180167
TrackFilteredModels1
ProteinId179845
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|179845gene_15419Tribonema minus UTEX_B_3156 geneContig_202 39208..43384 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|179845Trimin1|179845|e_gw1.202.82.1Tribonema minus UTEX_B_3156 polypeptideContig_202 39208..43384 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_15419_3exon_15419_3Tribonema minus UTEX_B_3156 exonContig_202 39208..39519 -
exon_15419_2exon_15419_2Tribonema minus UTEX_B_3156 exonContig_202 41662..42306 -
exon_15419_1exon_15419_1Tribonema minus UTEX_B_3156 exonContig_202 43178..43384 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_15419CDS_15419Tribonema minus UTEX_B_3156 CDSContig_202 43178..43384 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_15419 ID=mRNA_15419|Name=jgi.p|Trimin1|179845|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1164bp|location=Sequence derived from alignment at Contig_202:39208..43384- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGGTAGCAAAAAGCAGCTCGGGGAACTCCGAGTTGATACGGCAAGG
GGCGATGGTGACGCTGGTCATACAAAATTCGGCCCTGGCTCTATTTATGC
GATACAGCAGGAGCGCGGCCCGGGAAGGCCCAATGTACGCTGCCACTACG
GCTGTGGTCTGTGCCGAGGTGGTCAAGGTGGCGATGAGCTTGTTATTGCA
GACCAAGGAGGACGGCGGCGTCGCGGCCATGGCGCGCACGCTTCACCGCG
ACATCTTCACGCAGCCGGTGGAGATGCTCAAGATGTCCATACCGGCGTGC
CTGTACTGCCTGCAGAACAACCTCGCCTACGTCGCCGTCTCGCACCTCGA
CGGCCCCACGTACCAGCTCCTCTACCAGCTCAAGATCCTCACCACCGCCA
TGTTCAGCGTCGCGATGCTCAAAAAGGCGCTCGGCGTGCACCAGTGGGTC
AGCCTCTTCCTGCTCGCGCTGGGCGTCGGCATGGTGCAGCTCAGCGGCAG
CAGCGGCGGCGGCGGCGGCGGCAGCGCGGCGGCGGCGGCGGGGCCCGCGG
CGGCGGCGGCGGTCGTGACGACGCACCAAAACAGTCTGGTCGGCCTCGTG
GCGGTGATAGCGGCGTGCATGACGAGCGGCTTTGCGGGGGTCTACTTTGA
GAAGGTGCTCAAGACGAGCAAGGTCTCCATCTGGGTGAGGAACATCCAGC
TGGCGGGGTACGGCATGTTCATCGGCCTGGGGGGGGTGTACATGGGGCCG
GAGGGGGCGTCGGTGATGGAGCGGGGGTTCCTGTACGGGTACACGTGGGC
GGTGTGGGTGGCGGTGCTGCTCAACAGCCTGGGGGGGCTCATCGTGGCCG
TGGTGGTCAAATACGCGGACAACGTCGTCAAGGGGTTCGCGACGTCCATC
TCCATACTCATGACGTGCGTCGTCTCGTACTTCCTCTTCAACTTCAGCAT
CAACGCGCAGTTCCTCGCGGGCGCCGTGACGGTGCTGTACGCGACGTACC
TGTACGGGCAGGCGCGCGGCCCCGCGCTGCCGCGGCCGCTCGTGCGCCTG
CTGTGCTGCTGCTGCCGCAAGCGCGCCGCCGGCGCCGGCGGCGACCTCGA
CCGCCTGCTGCCGCTGTTTGACGGCAACGGCAAGGCCAAGGAGCAGGAGG
CGAGCAGCGCGTAG
back to top

protein sequence of jgi.p|Trimin1|179845

>Trimin1|179845|e_gw1.202.82.1 ID=Trimin1|179845|e_gw1.202.82.1|Name=jgi.p|Trimin1|179845|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=388bp
MEVAKSSSGNSELIRQGAMVTLVIQNSALALFMRYSRSAAREGPMYAATT
AVVCAEVVKVAMSLLLQTKEDGGVAAMARTLHRDIFTQPVEMLKMSIPAC
LYCLQNNLAYVAVSHLDGPTYQLLYQLKILTTAMFSVAMLKKALGVHQWV
SLFLLALGVGMVQLSGSSGGGGGGSAAAAAGPAAAAAVVTTHQNSLVGLV
AVIAACMTSGFAGVYFEKVLKTSKVSIWVRNIQLAGYGMFIGLGGVYMGP
EGASVMERGFLYGYTWAVWVAVLLNSLGGLIVAVVVKYADNVVKGFATSI
SILMTCVVSYFLFNFSINAQFLAGAVTVLYATYLYGQARGPALPRPLVRL
LCCCCRKRAAGAGGDLDRLLPLFDGNGKAKEQEASSA*
back to top

mRNA from alignment at Contig_202:39208..43384-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_15419 ID=mRNA_15419|Name=jgi.p|Trimin1|179845|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4177bp|location=Sequence derived from alignment at Contig_202:39208..43384- (Tribonema minus UTEX_B_3156 )
ATGGAGGTAGCAAAAAGCAGCTCGGGGAACTCCGAGTTGATACGGCAAGG GGCGATGGTGACGCTGGTCATACAAAATTCGGCCCTGGCTCTATTTATGC GATACAGCAGGAGCGCGGCCCGGGAAGGCCCAATGTACGCTGCCACTACG GCTGTGGTCTGTGCCGAGGTGGTCAAGGTGGCGATGAGCTTGTTATTGCA GACCAAGGTAAGCCCCTTGTGTGCTTACTGTGAGTGGTGCTAAGACGCAA CAGCTGCGCTGCTTTCAGCCAGCTGAAATATCGGGACGGGTCACACATGT ACACTTGAGTTTACTGCAAGCAACCAACTGTCATCAAATTGTCGCAAGTC TTTGGAACATTCCGCGCGCAATAGGTTGCTGAACGCAAAGCGCGTGGTGG TCTGGTAGTCTCTCAGTCTCTCATCAAACATGCACCGTCCAAACTCACCT GGGCTGGTCTTAATGAACAAATACAGCATCGACAGATTTCAAAAACCTTC TGCTCACCTGATGCGGTAGCATATTTGTGCCACTGTTCAACTGCTTCCTG CCTCTGCAAGCCGCGCCCAGTGCATCTGCTGCCCAGGTCATGCTACCGAC AACTCTCAATCTTGTAATTCCTGGTTGCTCTCGTGTCATCAGCACGGCAA CCTCGTGCAGATACAGTAGGCTCATTGCGGCCAACATTGCGCTCTGCATG GGCGCCGCGCACTTTGCATGGGGTTTAGCGTGAGGGTCAGGGTTAGGTCT AGGTTGAGAACGGAATACGTTTGGTTTCAATTCCAACATTTGTTGCCACT TGGCACAGGCCAGTACGCATGGATGCTGCTCCTGCAGCTGCAGCATTGCG CCGGCACGACCCTTTACCCCCGGCCCTGTCCTGTACACGCGGGCGGCGGC GCAACGGCCACTGGCCACCTCCCCTCGGAGCTCGCATGCATGCCTACCGC TTACACATACCGACAACAGAATACGTGCCACTAGCCGTCGATTACAGTGC CATCACCTGTCGCTCACCGCTGCCCATCACTGCTGCTGCTGCCGCTGCTG CTGCCGCTGCGCGCTGCCGCCGCCGCAGGAGGACGGCGGCGTCGCGGCCA TGGCGCGCACGCTTCACCGCGACATCTTCACGCAGCCGGTGGAGATGCTC AAGATGTCCATACCGGCGTGCCTGTACTGCCTGCAGAACAACCTCGCCTA CGTCGCCGTCTCGCACCTCGACGGCCCCACGTACCAGCTCCTCTACCAGC TCAAGATCCTCACCACCGCCATGTTCAGCGTCGCGATGCTCAAAAAGGCG CTCGGCGTGCACCAGTGGGTCAGCCTCTTCCTGCTCGCGCTGGGCGTCGG CATGGTGCAGCTCAGCGGCAGCAGCGGCGGCGGCGGCGGCGGCAGCGCGG CGGCGGCGGCGGGGCCCGCGGCGGCGGCGGCGGTCGTGACGACGCACCAA AACAGTCTGGTCGGCCTCGTGGCGGTGATAGCGGCGTGCATGACGAGCGG CTTTGCGGGGGTCTACTTTGAGAAGGTGCTCAAGACGAGCAAGGTCTCCA TCTGGGTGAGGAACATCCAGCTGGCGGGGTACGGCATGTTCATCGGCCTG GGGGGGGTGTACATGGGGCCGGAGGGGGCGTCGGTGATGGAGCGGGGGTT CCTGTACGGGTACACGTGGGCGGTGTGGGTGGCGGTGCTGCTCAACAGCC TGGGGGGGCTCATCGTGGCCGTGGTGAGTGACATCTCGAGTGACGTACTT TTAAAAAGATATAACGCTTGCTTGTGCCTATGCTGTGCGCTTGACCCGTG GGCGGTGTGGGTGGCGGTGCTGCTCAACAGCCTGGGAGGGCTCATCGTGG CCGTGGTGAGTGAAATCTTGAGTGACGTACTTCGGAGGATCAGGCTTGCT CGTGCCTACGTTGTGCTCTTGACCTGTTTGTTGCCAGAGTGCTATTGTGC ATGCTGCGGCAGCAAAGACCTGGTGCAATGGCAGATGGCCAGACCGTCAA TATTATATATGTGACAGGGCCGAGCACCTCCAACAGTAGCACACAAAGTA CTTTGTCTAGTGCTGTGCAGGCTTTAGCAGTCACTGCACACGGCTGTGCA GCGCTGTGGATGACCGTGGGAGCAGTACGCTGTTGAATGAACAAACAGGC CCATGTCAATTCGCAGACATTGCTCCAGTCTACAACATTGCGGCCTGGGG TACAATGAAAGCCCACTGCCAAGCACCATGCCGCGTCTTAGCTTTGCACG CTTCGCAGGCTCTGTCGGTGTGAAGCCTCTGAGCTATCTGTACTGTGAGT TTTACTACTACTAGTAGTAGTACCGCTCATGGCAACATTGCGCAGTACTT GGCTTCACAACTCGCACTGTTGTGGACGATCAATGCGGCTTTAGCACGGC TGCAAGTGGCGGTTACAGACTGTGCTGAGCTGAGCACTGTGCTTTCTCAA ACTTGAACTTGAACTTCAATATTGACTGTGAATGCCCGTGGAAGACCGCT CAGGCAGAACAGCTTACTAACGTTGTGTGAGACGCTCTGCAAAGTGCAGC ATCAACTTCAAGGGTAGCACGAAGTAATCTGCACCCAATGACATGTGGCA GCTGCCATGAGTTGCATAGCAGCTAGCAGGCTTGTATGTGGCTAGAGCTT GCCGCAAACAAATAATCGCATGTCCAACACCATATGTAGGCCTGTGCTTC TCAGTATTTTGGCATCTTCCTAAACGAAGTGCGCGCTGCCATGATCTTGG GGACGTTATGAGTACACAATGGAGTTAAGTGACTGGCTGCAATGTGGACT TGGACGCCACCGTCAGCACATTCTGTGAAGTGTATTTACAAGAATGAATC AAAATACATGTACTTAGAAGCTCTGAAAACAAAGCAAAGCAGAGCACTTG AGCAACGAAAAAGCAAATCAGAGGACATAGTCAGAGTCACAGCCCCATTG CAGAATGCTGCAGTGGATCAAGCTTGGAGCTTGAAGCATGACCGGGGAGG GGGCGGGGGGGGGGGCTGAGGGGTGTAGCTGGAGCTATGCACGGTACCAG TGGCGCGATGTTGACACTTTTGCATCGTTCATTAACAATGTGCTCATTTG ACCGCGACGTCAGCCGTAATGTTCTATGCCATACTGTAGAAGAATGTAGT GTTTCGCAGAGGCATTTGATGTGGCATTCGCCCCAAGGCAGGGCGTACTA TGTATGGTGGCTGCCACGCCGACCTTCGCGCAAAGATTTGATTATTTGTT GATTATGCAGTGCTACTGCTGCTGGTAGGTAGCTGAGCACTCAAACAAGC AACCGTCATAGATGGAAGAAAACGTGAATATGCATACACTTATATGCATA TGCAGGTCATATCATGGCACAAGCATATGCACGTTGACCATCTGCCAATG ACTGCATACTCACCCAAGTCTGTGTGCGCCCAGGACACAGCCCAAAACTG TAGTGCAGTTGGCATCTGAAATTAGACAACTTGAAGGAATGCGACGTGGT TCCAGGGGTGCAACAGATCTAACCGGGAGTTTCTTGCAGTTTTGGCCTCT GATATCATCACATGTCGGTGTGTCTGACTACAGCAGCCTGACAACAATGA GCCAATGGCAGCGGCATCTGTATGATTTGACACATCTGCAAGCCCAGCTG TAATCGTGCATCAGTGCCCAGTAGAAGTGCTTTTCAACATAGGCTTCTAC AGTATGCTGGTGCTGATCGTCACCGTAACTGTGTGTGCCCATCTTTGCAG CCCCCTTACAGCGCAGCAGCAAGCGCGCCGCACTGCTGCCATGTGCTCAG GAGCTAGACAACGTTCGCCTCTAACCTCCCCCCCCCCGTCCCCGCCCCTT CTCCGCGCGCGGCAGGTGGTCAAATACGCGGACAACGTCGTCAAGGGGTT CGCGACGTCCATCTCCATACTCATGACGTGCGTCGTCTCGTACTTCCTCT TCAACTTCAGCATCAACGCGCAGTTCCTCGCGGGCGCCGTGACGGTGCTG TACGCGACGTACCTGTACGGGCAGGCGCGCGGCCCCGCGCTGCCGCGGCC GCTCGTGCGCCTGCTGTGCTGCTGCTGCCGCAAGCGCGCCGCCGGCGCCG GCGGCGACCTCGACCGCCTGCTGCCGCTGTTTGACGGCAACGGCAAGGCC AAGGAGCAGGAGGCGAGCAGCGCGTAG
back to top

Coding sequence (CDS) from alignment at Contig_202:39208..43384-

>mRNA_15419 ID=mRNA_15419|Name=jgi.p|Trimin1|179845|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1164bp|location=Sequence derived from alignment at Contig_202:39208..43384- (Tribonema minus UTEX_B_3156 )
ATGGAGGTAGCAAAAAGCAGCTCGGGGAACTCCGAGTTGATACGGCAAGG
GGCGATGGTGACGCTGGTCATACAAAATTCGGCCCTGGCTCTATTTATGC
GATACAGCAGGAGCGCGGCCCGGGAAGGCCCAATGTACGCTGCCACTACG
GCTGTGGTCTGTGCCGAGGTGGTCAAGGTGGCGATGAGCTTGTTATTGCA
GACCAAGGAGGACGGCGGCGTCGCGGCCATGGCGCGCACGCTTCACCGCG
ACATCTTCACGCAGCCGGTGGAGATGCTCAAGATGTCCATACCGGCGTGC
CTGTACTGCCTGCAGAACAACCTCGCCTACGTCGCCGTCTCGCACCTCGA
CGGCCCCACGTACCAGCTCCTCTACCAGCTCAAGATCCTCACCACCGCCA
TGTTCAGCGTCGCGATGCTCAAAAAGGCGCTCGGCGTGCACCAGTGGGTC
AGCCTCTTCCTGCTCGCGCTGGGCGTCGGCATGGTGCAGCTCAGCGGCAG
CAGCGGCGGCGGCGGCGGCGGCAGCGCGGCGGCGGCGGCGGGGCCCGCGG
CGGCGGCGGCGGTCGTGACGACGCACCAAAACAGTCTGGTCGGCCTCGTG
GCGGTGATAGCGGCGTGCATGACGAGCGGCTTTGCGGGGGTCTACTTTGA
GAAGGTGCTCAAGACGAGCAAGGTCTCCATCTGGGTGAGGAACATCCAGC
TGGCGGGGTACGGCATGTTCATCGGCCTGGGGGGGGTGTACATGGGGCCG
GAGGGGGCGTCGGTGATGGAGCGGGGGTTCCTGTACGGGTACACGTGGGC
GGTGTGGGTGGCGGTGCTGCTCAACAGCCTGGGGGGGCTCATCGTGGCCG
TGGTGGTCAAATACGCGGACAACGTCGTCAAGGGGTTCGCGACGTCCATC
TCCATACTCATGACGTGCGTCGTCTCGTACTTCCTCTTCAACTTCAGCAT
CAACGCGCAGTTCCTCGCGGGCGCCGTGACGGTGCTGTACGCGACGTACC
TGTACGGGCAGGCGCGCGGCCCCGCGCTGCCGCGGCCGCTCGTGCGCCTG
CTGTGCTGCTGCTGCCGCAAGCGCGCCGCCGGCGCCGGCGGCGACCTCGA
CCGCCTGCTGCCGCTGTTTGACGGCAACGGCAAGGCCAAGGAGCAGGAGG
CGAGCAGCGCGTAG
back to top