mRNA_15419 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|179845 vs. uniprot
Match: A0A836CHP3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHP3_9STRA) HSP 1 Score: 669 bits (1726), Expect = 3.300e-241 Identity = 387/387 (100.00%), Postives = 387/387 (100.00%), Query Frame = 1 Query: 1 MEVAKSSSGNSELIRQGAMVTLVIQNSALALFMRYSRSAAREGPMYAATTAVVCAEVVKVAMSLLLQTKEDGGVAAMARTLHRDIFTQPVEMLKMSIPACLYCLQNNLAYVAVSHLDGPTYQLLYQLKILTTAMFSVAMLKKALGVHQWVSLFLLALGVGMVQLSGSSXXXXXXXXXXXXXXXXXXXXXXTHQNSLVGLVAVIAACMTSGFAGVYFEKVLKTSKVSIWVRNIQLAGYGMFIGLGGVYMGPEGASVMERGFLYGYTWAVWVAVLLNSLGGLIVAVVVKYADNVVKGFATSISILMTCVVSYFLFNFSINAQFLAGAVTVLYATYLYGQARGPALPRPLVRLLCXXXXXXXAGAGGDLDRLLPLFDGNGKAKEQEASSA 1161 MEVAKSSSGNSELIRQGAMVTLVIQNSALALFMRYSRSAAREGPMYAATTAVVCAEVVKVAMSLLLQTKEDGGVAAMARTLHRDIFTQPVEMLKMSIPACLYCLQNNLAYVAVSHLDGPTYQLLYQLKILTTAMFSVAMLKKALGVHQWVSLFLLALGVGMVQLSGSSXXXXXXXXXXXXXXXXXXXXXXTHQNSLVGLVAVIAACMTSGFAGVYFEKVLKTSKVSIWVRNIQLAGYGMFIGLGGVYMGPEGASVMERGFLYGYTWAVWVAVLLNSLGGLIVAVVVKYADNVVKGFATSISILMTCVVSYFLFNFSINAQFLAGAVTVLYATYLYGQARGPALPRPLVRLLCXXXXXXXAGAGGDLDRLLPLFDGNGKAKEQEASSA Sbjct: 1 MEVAKSSSGNSELIRQGAMVTLVIQNSALALFMRYSRSAAREGPMYAATTAVVCAEVVKVAMSLLLQTKEDGGVAAMARTLHRDIFTQPVEMLKMSIPACLYCLQNNLAYVAVSHLDGPTYQLLYQLKILTTAMFSVAMLKKALGVHQWVSLFLLALGVGMVQLSGSSXXXXXXXXXXXXXXXXXXXXXXTHQNSLVGLVAVIAACMTSGFAGVYFEKVLKTSKVSIWVRNIQLAGYGMFIGLGGVYMGPEGASVMERGFLYGYTWAVWVAVLLNSLGGLIVAVVVKYADNVVKGFATSISILMTCVVSYFLFNFSINAQFLAGAVTVLYATYLYGQARGPALPRPLVRLLCXXXXXXXAGAGGDLDRLLPLFDGNGKAKEQEASSA 387
BLAST of jgi.p|Trimin1|179845 vs. uniprot
Match: A0A835ZHJ8_9STRA (UDP-N-acetylglucosamine transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHJ8_9STRA) HSP 1 Score: 390 bits (1002), Expect = 1.160e-131 Identity = 211/328 (64.33%), Postives = 250/328 (76.22%), Query Frame = 1 Query: 40 IRQGAMVTLVIQNSALALFMRYSRSAAREGPMYAATTAVVCAEVVKVAMSLLLQTKEDGGVAAMARTLHRDIFTQPVEMLKMSIPACLYCLQNNLAYVAVSHLDGPTYQLLYQLKILTTAMFSVAMLKKALGVHQWVSLFLLALGVGMVQLSGSSXXXXXXXXXXXXXXXXXXXXXXTHQNSLVGLVAVIAACMTSGFAGVYFEKVLKTSKVSIWVRNIQLAGYGMFIGLGGVYMGPEGASVMERGFLYGYTWAVWVAVLLNSLGGLIVAVVVKYADNVVKGFATSISILMTCVVSYFLFNFSINAQFLAGAVTVLYATYLYGQARGP 1023 IR A+V+LV+QN++LAL +RY AA EGPMYAATTAVVCAEV+KVA+SLLLQT+ED GVA + TL RDI QPVE+LKM +PA L+CLQNNLAYVA+++LDGPTYQLL QLK+LTTAMFSV ML +AL HQW+SL LLA GVG+VQLS + +NS+ GLV V+ AC++SGFAGVYFEKVLKTS VSIWVRNIQL YG IGL GVY GP+ +V + GFL GYT VW VL NSLGGLIVAVVVKYADNV+KGFATSI+IL+TC++SYFLF+F++ AQFL G VLY+T+LY Q P Sbjct: 6 IRTVALVSLVVQNASLALLIRY---AAVEGPMYAATTAVVCAEVIKVALSLLLQTQEDKGVAGLLHTLKRDILQQPVEVLKMGVPAALFCLQNNLAYVAIANLDGPTYQLLSQLKLLTTAMFSVTMLNRALAGHQWLSLCLLACGVGLVQLSTAGGEAKRD------------------ENSVTGLVCVLLACVSSGFAGVYFEKVLKTSTVSIWVRNIQLGVYGTVIGLAGVYFGPDATAVAQYGFLNGYTGVVWAGVLSNSLGGLIVAVVVKYADNVIKGFATSIAILVTCIISYFLFSFTVTAQFLLGGALVLYSTHLYSQVHHP 312
BLAST of jgi.p|Trimin1|179845 vs. uniprot
Match: A0A835Z583_9STRA (Nucleotide-sugar transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z583_9STRA) HSP 1 Score: 382 bits (981), Expect = 1.340e-128 Identity = 212/347 (61.10%), Postives = 253/347 (72.91%), Query Frame = 1 Query: 1 MEVAKSSSGNSELIRQG---AMVTLVIQNSALALFMRYSRSA-AREGPMYAATTAVVCAEVVKVAMSLLLQTKEDGGVAAMARTLHRDIFTQPVEMLKMSIPACLYCLQNNLAYVAVSHLDGPTYQLLYQLKILTTAMFSVAMLKKALGVHQWVSLFLLALGVGMVQLSGSSXXXXXXXXXXXXXXXXXXXXXXTHQNSLVGLVAVIAACMTSGFAGVYFEKVLKTSKVSIWVRNIQLAGYGMFIGLGGVYMGPEGASVMERGFLYGYTWAVWVAVLLNSLGGLIVAVVVKYADNVVKGFATSISILMTCVVSYFLFNFSINAQFLAGAVTVLYATYLYGQARGPAL 1029 M A+ S N + RQ A+VTLV+QNSALAL MRYSR +EG +YAA+TAVVCAEVVKVA SLLLQ K+D + + +T+ RDIF QP + KM++PA LYC+QNNLAY+A+S+LD PTYQLLYQ+KILTTA FSV +L AL QW SL +L GVG+VQL+ +S QNS++GL AV AAC+TSGFAGVYFEKVLK S VSIW+RN+QLAGYG IGL GVY GP+ +V+E GFLYGY W VW AVLLNSLGGL+VAVVVKYADNVVKGFATSISILMT + S FNF+ N +F+AGA V+Y+TYLYGQ R +L Sbjct: 1 MTAAEKSLKNYQTKRQVQAIALVTLVVQNSALALLMRYSRRVPVKEGSLYAASTAVVCAEVVKVAASLLLQLKDDRDLRGLWQTVKRDIFCQPWDTQKMAVPAALYCMQNNLAYIAISNLDSPTYQLLYQMKILTTATFSVTLLGHALNAQQWASLCMLVAGVGLVQLTQNSTARSSYSSSGGSSSEFA-------QNSMMGLAAVAAACVTSGFAGVYFEKVLKASNVSIWIRNMQLAGYGAAIGLAGVYAGPDARAVVEHGFLYGYNWKVWGAVLLNSLGGLVVAVVVKYADNVVKGFATSISILMTSIFSLVFFNFNFNIRFMAGAAMVIYSTYLYGQLRRRSL 340
BLAST of jgi.p|Trimin1|179845 vs. uniprot
Match: D7FPV6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV6_ECTSI) HSP 1 Score: 325 bits (834), Expect = 5.000e-105 Identity = 199/352 (56.53%), Postives = 262/352 (74.43%), Query Frame = 1 Query: 34 ELIRQGAMVTLVIQNSALALFMRYS-----RSAAREGPMY----AATT----------------AVVCAEVVKVAMSLLLQTKEDGGVAAMARTLHRDIFTQPVEMLKMSIPACLYCLQNNLAYVAVSHLDGPTYQLLYQLKILTTAMFSVAMLKKALGVHQWVSLFLLALGVGMVQLSG-SSXXXXXXXXXXXXXXXXXXXXXXTHQNSLVGLVAVIAACMTSGFAGVYFEKVLKTSKVSIWVRNIQLAGYGMFIGLGGVYMGPEGASVMERGFLYGYTWAVWVAVLLNSLGGLIVAVVVKYADNVVKGFATSISILMTCVVSYFLFNFSINAQFLAGAVTVLYATYLYGQ 1011 E +R ++TLV+QNSA A+FMRYS + EG M A T+ AV+ AE+ K+A S+LLQ ++DG V + +TL D++ +PVE+LKM++PACLY +QNNL YVA+S+LDGPT+QLLYQLKILTTA+FSV MLK+ L + QW +L +LALGVG+VQ+S SS XXXXXXXXXXXXXXXXX + QN L+GLV V+ AC TSGFAGVYFEKVLK + VS+WVRN+QL+G+G+ +G G V+ +G +V E GF YGY +AVW+A+LLNS+GGL+VA+VVKYADNV+KGFATS+SI++T ++S+FLF F I+ F+ GA VL++T+LY Q Sbjct: 4 EAVRGAILLTLVVQNSAQAIFMRYSFKPKSQCGGGEGNMPSRRPAVTSQVEERGQRSRVRRPRPAVMMAELCKLACSILLQYRDDGSVRHVVKTLREDVWEKPVELLKMAVPACLYVVQNNLNYVAISNLDGPTFQLLYQLKILTTALFSVVMLKRVLHMKQWGALAMLALGVGLVQVSSNSSKSSGXXXXXXXXXXXXXXXXXGSGQNPLLGLVMVLLACCTSGFAGVYFEKVLKGTSVSLWVRNMQLSGFGILLGAGCVWF-KDGQAVSENGFFYGYNYAVWMAILLNSMGGLVVAMVVKYADNVIKGFATSVSIVLTALISFFLFEFQISVMFVIGAYFVLHSTFLYSQ 354
BLAST of jgi.p|Trimin1|179845 vs. uniprot
Match: A0A7S2RGH9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RGH9_9STRA) HSP 1 Score: 291 bits (745), Expect = 1.350e-92 Identity = 165/321 (51.40%), Postives = 220/321 (68.54%), Query Frame = 1 Query: 52 AMVTLVIQNSALALFMRYSRSAAREGPMYAATTAVVCAEVVKVAMSLLLQTKEDGGVAAMARTLHRDIFTQPVEMLKMSIPACLYCLQNNLAYVAVSHLDGPTYQLLYQLKILTTAMFSVAMLKKALGVHQWVSLFLLALGVGMVQLSGSSXXXXXXXXXXXXXXXXXXXXXXTHQNSLVGLVAVIAACMTSGFAGVYFEKVLKTSKVSIWVRNIQLAGYGMFIGLGGVYMGPEGASVMERGFLYGYTWAVWVAVLLNSLGGLIVAVVVKYADNVVKGFATSISILMTCVVSYFLFNFSINAQFLAGAVTVLYATYLYGQA 1014 +++ LV+QNSALAL MRYSR+ +GP+Y A+TAVV EV+K +SL L +E+ + L +F P++ L++ +PA LY +QNNLAY A+S+LD TYQLLYQLKILTTA+FSV +L ++LG QW SL +L +GVG+VQ S + +NS VGL+AV+AAC +SG AGVYFEKVLK SK S+W+RN+QL+ G+ +G V+ + V+E GF YGY VW VLL +LGGL+VA+VVKYADN++KGFATSISIL++CV SYFLFNF +N +FL GA VLYA +L+ + Sbjct: 51 SLMVLVVQNSALALTMRYSRT--MDGPLYLASTAVVVCEVLKFFVSLGLLIREEE--KPVVELLFDRVFNNPMDFLRLMVPAGLYTVQNNLAYFAMSNLDAATYQLLYQLKILTTAIFSVVLLGRSLGKWQWCSLCVLCMGVGLVQTSSMKQDAD------------------SKENSFVGLLAVLAACCSSGAAGVYFEKVLKGSKTSLWIRNVQLSCIGVVLGFIPVWKDKD--VVLEHGFFYGYNNVVWAVVLLQALGGLLVALVVKYADNILKGFATSISILISCVTSYFLFNFEVNPKFLFGATLVLYAVFLFSSS 347
BLAST of jgi.p|Trimin1|179845 vs. uniprot
Match: A0A6P4YE82_BRABE (UDP-galactose translocator-like isoform X1 n=9 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4YE82_BRABE) HSP 1 Score: 285 bits (730), Expect = 2.020e-90 Identity = 154/326 (47.24%), Postives = 219/326 (67.18%), Query Frame = 1 Query: 52 AMVTLVIQNSALALFMRYSRSAAREGPMYAATTAVVCAEVVKVAMSLLLQTKEDGGVAAMARTLHRDIFTQPVEMLKMSIPACLYCLQNNLAYVAVSHLDGPTYQLLYQLKILTTAMFSVAMLKKALGVHQWVSLFLLALGVGMVQLSGSSXXXXXXXXXXXXXXXXXXXXXXTHQNSLVGLVAVIAACMTSGFAGVYFEKVLKTSKVSIWVRNIQLAGYGMFIGLGGVYMGPEGASVMERGFLYGYTWAVWVAVLLNSLGGLIVAVVVKYADNVVKGFATSISILMTCVVSYFLFNFSINAQFLAGAVTVLYATYLYGQARGPAL 1029 ++V LV+QN++L L MRY+R+ G M+ +TTAVV AEV K+ +L+ + G A + L+ ++F P++ LKM++PA +Y LQNNLAYVA+S+L T+Q+ YQLKI+TTA+FS+ ML K++ QWVSLFLL GV VQL + T QN L+GL+AV+ +C++SGFAGV+FEKVLK S S+W+RNIQLA + + +GL ++ +GA V E+GF Y Y W W+ V + + GGL+VAVVVKYADN++KGFATS SI+++C+ S +LF+F I AQF GA V+++ YLYG+ P + Sbjct: 24 SLVILVVQNASLILTMRYART--MPGDMFFSTTAVVMAEVFKLLGCVLIIMCQYVGFRACTQHLYEELFQNPMDSLKMAVPALVYTLQNNLAYVAISNLSAATFQVTYQLKIMTTALFSIVMLGKSISRLQWVSLFLLFAGVSAVQLESTGATSSGKATGEKVE---------TEQNPLLGLIAVVVSCISSGFAGVFFEKVLKGSVASVWIRNIQLAFFSILLGLVSMWT-KDGAGVSEKGFFYAYNWVTWMTVCMQAFGGLLVAVVVKYADNILKGFATSFSIILSCIASVYLFSFHITAQFAFGASLVIFSIYLYGRPSRPTV 337
BLAST of jgi.p|Trimin1|179845 vs. uniprot
Match: A0A7M7PLR5_STRPU (Uncharacterized protein n=5 Tax=Echinacea TaxID=7674 RepID=A0A7M7PLR5_STRPU) HSP 1 Score: 283 bits (724), Expect = 8.100e-90 Identity = 154/318 (48.43%), Postives = 213/318 (66.98%), Query Frame = 1 Query: 64 LVIQNSALALFMRYSRSAAREGPMYAATTAVVCAEVVKVAMSLLLQTKEDGG--VAAMARTLHRDIFTQPVEMLKMSIPACLYCLQNNLAYVAVSHLDGPTYQLLYQLKILTTAMFSVAMLKKALGVHQWVSLFLLALGVGMVQLSGSSXXXXXXXXXXXXXXXXXXXXXXTHQNSLVGLVAVIAACMTSGFAGVYFEKVLKTSKVSIWVRNIQLAGYGMFIGLGGVYMGPEGASVMERGFLYGYTWAVWVAVLLNSLGGLIVAVVVKYADNVVKGFATSISILMTCVVSYFLFN-FSINAQFLAGAVTVLYATYLYG 1008 L++Q + L L MRYSR+ EGP Y ++TAVV AE +K+ +LL ++GG + ++ + +I P++ LK++IPA LY LQNNL ++A+SHLD TYQ+ YQLKILTTAMFSV ML K L +W+SL LL GV +VQ+ S + + L+GL+AV+ AC +SGFAGVYFEK+LK +K S+W+RNIQLA +G+ GLGGV +G +G+ V E GFL GY W V+L +LGGLI+A V+KYADN++KGFATS+SI+++ V+SY+L N F+ + F GA V+ AT+LYG Sbjct: 22 LIVQTTTLVLTMRYSRTVESEGPRYLSSTAVVMAECMKIVACILLVYFQEGGRTIEGFSKVIREEIINSPMDCLKLAIPAGLYTLQNNLLFLALSHLDAATYQVTYQLKILTTAMFSVFMLGKQLNASKWISLILLMAGVALVQMPSESKPKEEEEH--------------SMSSELIGLIAVLCACFSSGFAGVYFEKILKGTKQSLWLRNIQLAFFGVIFGLGGV-IGKDGSKVAENGFLQGYCMITWSVVILQALGGLIIAAVIKYADNILKGFATSLSIILSTVISYYLLNDFTPTSYFFIGAAFVISATFLYG 324
BLAST of jgi.p|Trimin1|179845 vs. uniprot
Match: A0A672T205_SINGR (UDP-N-acetylglucosamine transporter-like n=13 Tax=Cyprinidae TaxID=7953 RepID=A0A672T205_SINGR) HSP 1 Score: 283 bits (725), Expect = 1.260e-89 Identity = 159/340 (46.76%), Postives = 222/340 (65.29%), Query Frame = 1 Query: 16 SSSGNSELIRQGAMVTLVIQNSALALFMRYSRSAAREGPMYAATTAVVCAEVVKVAMSLLLQTKEDG-GVAAMARTLHRDIFTQPVEMLKMSIPACLYCLQNNLAYVAVSHLDGPTYQLLYQLKILTTAMFSVAMLKKALGVHQWVSLFLLALGVGMVQLSGSSXXXXXXXXXXXXXXXXXXXXXXTHQNSLVGLVAVIAACMTSGFAGVYFEKVLKTSKVSIWVRNIQLAGYGMFIGLGGVYMGPEGASVMERGFLYGYTWAVWVAVLLNSLGGLIVAVVVKYADNVVKGFATSISILMTCVVSYFLF-NFSINAQFLAGAVTVLYATYLYGQARGPAL 1029 S S S ++ ++ LV+Q ++L L MRYSR+ +GP Y A++AVVCAEV+K+A +LL +E V A+ R L +I +P+ LK++IP+ +Y LQNNL YVA+S+LD TYQ+ YQLKILTTA+FSV+ML K LG++QW+SL +L G+ +VQ T + L+GL+AV+ AC +SGFAGVYFEK+LK SK S+W+RNIQL +G+ GLGGV+ +G V E G GY W V L +LGGL++A V+KYADN++KGFATSISI+++ ++SYFL +F + F GA+ V+ AT+LYG PA+ Sbjct: 34 SMSSTSSRLKYVSLGVLVLQTTSLVLTMRYSRTLQSDGPRYLASSAVVCAEVLKIAACMLLVFREHSFSVRALNRVLKEEIINKPLLTLKLAIPSGIYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFSVSMLGKILGIYQWLSLVILMTGIALVQWPAE-------------VTSSTKQEDLTAGSQLMGLLAVLVACFSSGFAGVYFEKILKESKQSVWIRNIQLGLFGLIFGLGGVFA-YDGERVQENGLFQGYNHVTWTVVALQALGGLVIAAVIKYADNILKGFATSISIILSTLISYFLLEDFDPTSVFFLGAMLVIAATFLYGYESTPAV 359
BLAST of jgi.p|Trimin1|179845 vs. uniprot
Match: UPI001CF46CA6 (LOW QUALITY PROTEIN: UDP-galactose translocator-like n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF46CA6) HSP 1 Score: 283 bits (724), Expect = 1.780e-89 Identity = 154/320 (48.12%), Postives = 217/320 (67.81%), Query Frame = 1 Query: 52 AMVTLVIQNSALALFMRYSRSAAREGPMYAATTAVVCAEVVKVAMSLLLQTKEDGGVAAMARTLHRDIFTQPVEMLKMSIPACLYCLQNNLAYVAVSHLDGPTYQLLYQLKILTTAMFSVAMLKKALGVHQWVSLFLLALGVGMVQLSGSSXXXXXXXXXXXXXXXXXXXXXXTHQNSLVGLVAVIAACMTSGFAGVYFEKVLKTSKVSIWVRNIQLAGYGMFIGLGGVYMGPEGASVMERGFLYGYTWAVWVAVLLNSLGGLIVAVVVKYADNVVKGFATSISILMTCVVSYFLFNFSINAQFLAGAVTVLYATYLYGQ 1011 +++TL +QN++L L +RYSR+ G MY TTAVV AE++KV SLL+ + G V L+ I QP + LK+SIPA +Y +QNNL Y+A+S+LD T+Q+ YQLKILTTA+FSV ML K L QWVSL +L GV +VQL ++ QN +GLVAVI +C+ SGFAGVYFEK++K S+ S+W+RNIQL YG IG+ G+Y+ +G + ++G L+GY+ VW+ + + + GGL+VAVVVKYADN++KGFATS +I+++CVVS +LF+F +++QFL GA V+ A +LYG+ Sbjct: 37 SLITLTVQNASLILTIRYSRTL--PGDMYITTTAVVFAEILKVLASLLILLLQKGSVRDWLHFLYSSIIGQPFDTLKLSIPALIYTVQNNLQYIAISNLDAATFQVTYQLKILTTALFSVFMLSKNLVKLQWVSLVMLFAGVSIVQLQPTNLSLNKTNPSDSEKAQVT-------QNPFLGLVAVIMSCLCSGFAGVYFEKIVKGSQTSVWLRNIQLGIYGTIIGIAGMYI-KDGEKISDKGILFGYSTVVWIVIFMQAFGGLLVAVVVKYADNILKGFATSFAIILSCVVSVYLFSFQLSSQFLFGAGLVILAIFLYGR 346
BLAST of jgi.p|Trimin1|179845 vs. uniprot
Match: V4AN80_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4AN80_LOTGI) HSP 1 Score: 281 bits (719), Expect = 2.580e-89 Identity = 155/331 (46.83%), Postives = 225/331 (67.98%), Query Frame = 1 Query: 52 AMVTLVIQNSALALFMRYSRSAAREGPMYAATTAVVCAEVVKVAMSLLLQTKEDGGVAAMARTLHRDIFTQPVEMLKMSIPACLYCLQNNLAYVAVSHLDGPTYQLLYQLKILTTAMFSVAMLKKALGVHQWVSLFLLALGVGMVQLSGSSXXXXXXXXXXXXXXXXXXXXXXTHQNSLVGLVAVIAACMTSGFAGVYFEKVLKTSKVSIWVRNIQLAGYGMFIGLGGVYMGPEGASVMERGFLYGYTWAVWVAVLLNSLGGLIVAVVVKYADNVVKGFATSISILMTCVVSYFLFNFSINAQFLAGAVTVLYATYLYGQARGPALPRPLV 1044 ++V L++QN+AL L MRY+R+ + G MY ++TAVV +E+ K+ ++ ++GGV + L DI P++ +K+S+P+ +Y +QNNL Y+AVS+LD T+Q+ YQLKILTTA+FSV ML+KA+ QW+SL +L +GV +VQL + QN VGLVAVI +C+ SGFAGVYFEK+LK ++ S+W+RNIQL+ G+ IGL + + +GA V E+GF +GYTW VW+ + L S GGLIVAVVVKYADN++KGFATS SI+++C+VS + F+F ++ QF+ GA V+ A Y+Y ++ P+PLV Sbjct: 10 SLVALILQNAALILVMRYTRT--QHGDMYLSSTAVVMSEMCKLLTCCVIIIYQEGGVGQFVKMLKTDIIDCPLDCVKVSVPSIIYTIQNNLLYLAVSNLDAATFQVTYQLKILTTAIFSVFMLEKAVAKLQWLSLVVLFVGVSIVQLQPKTSEKSVSQNLA--------------QNPFVGLVAVIISCVLSGFAGVYFEKILKGTRQSVWIRNIQLSVLGIVIGLITMEL-KDGAKVTEKGFFFGYTWFVWLVIFLQSFGGLIVAVVVKYADNILKGFATSASIVLSCIVSVYFFDFHLSIQFVIGASLVMVAVYMY--SKFVPKPKPLV 321 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|179845 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_15419 ID=mRNA_15419|Name=jgi.p|Trimin1|179845|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1164bp|location=Sequence derived from alignment at Contig_202:39208..43384- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGAGGTAGCAAAAAGCAGCTCGGGGAACTCCGAGTTGATACGGCAAGGback to top protein sequence of jgi.p|Trimin1|179845 >Trimin1|179845|e_gw1.202.82.1 ID=Trimin1|179845|e_gw1.202.82.1|Name=jgi.p|Trimin1|179845|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=388bp MEVAKSSSGNSELIRQGAMVTLVIQNSALALFMRYSRSAAREGPMYAATTback to top mRNA from alignment at Contig_202:39208..43384- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_15419 ID=mRNA_15419|Name=jgi.p|Trimin1|179845|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4177bp|location=Sequence derived from alignment at Contig_202:39208..43384- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_202:39208..43384- >mRNA_15419 ID=mRNA_15419|Name=jgi.p|Trimin1|179845|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1164bp|location=Sequence derived from alignment at Contig_202:39208..43384- (Tribonema minus UTEX_B_3156 )back to top |