mRNA_15230 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|177062
Unique NamemRNA_15230
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|177062 vs. uniprot
Match: A0A835ZAC1_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAC1_9STRA)

HSP 1 Score: 1203 bits (3113), Expect = 0.000e+0
Identity = 599/599 (100.00%), Postives = 599/599 (100.00%), Query Frame = 1
Query:    1 MVEKFEKDGTLPAGVDSDPEHMELRTILEDPVGQKYIGAFAKKTLTHESFFAWTEIQEYRSIPTADYQRGMAMHIYQKYIKEGAILQLGCVKPADRQCIKAVLDQSKYDASVTNNQLYDKVQQAVFIEMYHNTFQRFKVSDEYSEMRKMLRETYNRVCLSDFDYIAQIGEGGFGRVVHVRKKSTMAHLAMKIQLKTALLETFSDDPNRIDNERRVLAATYHPFIVGMNYAFQTETLAIMVLDLVTCGDLQEAINQAPNKRLNEVRVQFYVAEIILALSHLHELGLMFRDLKPCNVLLGQDGHVKLTDMGGVAEFAKGTCLDPMDSCSGSSPYMMEIGGQRKGNTEARKLSQSHRRRSIMGTHGYMAPEMVILLSQPRAVRKGYTKAVDFWSLGVTMYKLLTGVRPFENKRFLNEILTEVRFPPYMSAEAKDLVIRLLDGNEHRRLGASPELLAELKAHPFFNGIDWVRLSVRHMIPPYVPDAKPLEQTPQYASFDALMEAYRTQDEADRSGGTPMCDWTQKPSPADQRFFQSWDFISMQTLKIEMGIANEMVSHDTNFKVRQLMGDPGDSSKASPRGVFILRHANSMSASRGNKLGKSM 1797
            MVEKFEKDGTLPAGVDSDPEHMELRTILEDPVGQKYIGAFAKKTLTHESFFAWTEIQEYRSIPTADYQRGMAMHIYQKYIKEGAILQLGCVKPADRQCIKAVLDQSKYDASVTNNQLYDKVQQAVFIEMYHNTFQRFKVSDEYSEMRKMLRETYNRVCLSDFDYIAQIGEGGFGRVVHVRKKSTMAHLAMKIQLKTALLETFSDDPNRIDNERRVLAATYHPFIVGMNYAFQTETLAIMVLDLVTCGDLQEAINQAPNKRLNEVRVQFYVAEIILALSHLHELGLMFRDLKPCNVLLGQDGHVKLTDMGGVAEFAKGTCLDPMDSCSGSSPYMMEIGGQRKGNTEARKLSQSHRRRSIMGTHGYMAPEMVILLSQPRAVRKGYTKAVDFWSLGVTMYKLLTGVRPFENKRFLNEILTEVRFPPYMSAEAKDLVIRLLDGNEHRRLGASPELLAELKAHPFFNGIDWVRLSVRHMIPPYVPDAKPLEQTPQYASFDALMEAYRTQDEADRSGGTPMCDWTQKPSPADQRFFQSWDFISMQTLKIEMGIANEMVSHDTNFKVRQLMGDPGDSSKASPRGVFILRHANSMSASRGNKLGKSM
Sbjct:    1 MVEKFEKDGTLPAGVDSDPEHMELRTILEDPVGQKYIGAFAKKTLTHESFFAWTEIQEYRSIPTADYQRGMAMHIYQKYIKEGAILQLGCVKPADRQCIKAVLDQSKYDASVTNNQLYDKVQQAVFIEMYHNTFQRFKVSDEYSEMRKMLRETYNRVCLSDFDYIAQIGEGGFGRVVHVRKKSTMAHLAMKIQLKTALLETFSDDPNRIDNERRVLAATYHPFIVGMNYAFQTETLAIMVLDLVTCGDLQEAINQAPNKRLNEVRVQFYVAEIILALSHLHELGLMFRDLKPCNVLLGQDGHVKLTDMGGVAEFAKGTCLDPMDSCSGSSPYMMEIGGQRKGNTEARKLSQSHRRRSIMGTHGYMAPEMVILLSQPRAVRKGYTKAVDFWSLGVTMYKLLTGVRPFENKRFLNEILTEVRFPPYMSAEAKDLVIRLLDGNEHRRLGASPELLAELKAHPFFNGIDWVRLSVRHMIPPYVPDAKPLEQTPQYASFDALMEAYRTQDEADRSGGTPMCDWTQKPSPADQRFFQSWDFISMQTLKIEMGIANEMVSHDTNFKVRQLMGDPGDSSKASPRGVFILRHANSMSASRGNKLGKSM 599          
BLAST of jgi.p|Trimin1|177062 vs. uniprot
Match: D8LEF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF7_ECTSI)

HSP 1 Score: 627 bits (1616), Expect = 3.190e-218
Identity = 324/567 (57.14%), Postives = 408/567 (71.96%), Query Frame = 1
Query:    1 MVEKFEKDGTLPAGVDSDPEHMELRTILEDPVGQKYIGAFAKKTLTHESFFAWTEIQEYRSIPTADYQRGMAMHIYQKYIKEGAILQLGCVKPADRQCIKAVLDQSKYDA----SVTNNQLYDKVQQAVFIEMYHNTFQRFKVSDEYSEMRKMLRETYNRVCLSDFDYIAQIGEGGFGRVVHVRKKSTMAHLAMKIQLKTALLETFSDDPNRIDNERRVLAATYHPFIVGMNYAFQTETLAIMVLDLVTCGDLQEAINQAPNKRLNEVRVQFYVAEIILALSHLHELGLMFRDLKPCNVLLGQDGHVKLTDMGGVAEFAKGTCLDPMDSCSGSSPYM-MEIGG--QRKGNTEARK-LSQSHRRRSIMGTHGYMAPEMVILLSQPRAVRKGYTKAVDFWSLGVTMYKLLTGVRPFENKRFLNEILTEVRFPPYMSAEAKDLVIRLLDGNEHRRLGASPELLAELKAHPFFNGIDWVRLSVRHMIPPYVPDAKPLEQTPQYASFDALMEAYRTQDEADRSGGTPMCDWTQKPSPADQRFFQSWDFISMQTLKIEMGIANEMVSHDTNFK 1677
            M ++   D +L  G   DP  +E+R ILEDP+GQKYIG FAKK +T ESF+AW +IQE+RSIPT DY+RG +MHIYQKYI+EGA+LQ+G +   +R  IK ++D    D     S  +  ++D  ++AVF EM++NTFQRF  S EY++M   ++  YN+VC  DF YI +IGEGGFGRVVHV+KK+T +H AMKIQLKTALL+TF+DDP RID+ERRVL+ T+HPFIVGM+YAFQT  L IM L+LVT GDLQEAI+ AP  R+   RVQFY AEIILAL HLH+LGLM+RDLKPCNVLL  DGHVKL DMGGVAEFA GTCL+        +P+   EIG   Q K + +    L+  HRRRSIMGT GYMAPEMVIL  QPR+VR GY+ AVD+WSLGVT++KLLTG RPF+ +RF  E+L  + +P Y+ +EA+ ++  LL   E  RLG +PE L  LK+H +F GIDW+RLS RH++PPY+P   PL + P Y +FD LM  +  Q E + S      DW   P+  DQ FF SWDF+SM TLKIE+GI++EM  HD +FK
Sbjct:    1 MKKELSDDKSLTGG---DPRKLEMRAILEDPIGQKYIGQFAKKVMTQESFYAWVDIQEFRSIPTGDYRRGKSMHIYQKYIREGAVLQVGSIPAEERAKIKHIIDAGVVDKAGNKSGISTDMFDFFRKAVFKEMFYNTFQRFSASPEYAQMHADIKNAYNKVCPDDFLYIERIGEGGFGRVVHVKKKTTQSHYAMKIQLKTALLDTFNDDPTRIDHERRVLSVTHHPFIVGMDYAFQTPELGIMCLELVTGGDLQEAIDTAPEGRIEAKRVQFYSAEIILALVHLHDLGLMYRDLKPCNVLLMGDGHVKLADMGGVAEFADGTCLETNKD---KNPFTGTEIGSLPQSKSSEDGPPTLNNKHRRRSIMGTQGYMAPEMVILPKQPRSVRVGYSNAVDYWSLGVTVFKLLTGSRPFDRRRF-QELLDTISWPEYVGSEARSVISGLLACKETERLGGTPENLLALKSHEYFEGIDWLRLSQRHVLPPYLPKVPPLREEPLYQTFDHLMRDFYAQQEME-SATKDTYDWFVAPTDEDQAFFNSWDFVSMHTLKIELGISSEMAVHDQSFK 559          
BLAST of jgi.p|Trimin1|177062 vs. uniprot
Match: A0A7S1U415_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U415_9STRA)

HSP 1 Score: 545 bits (1404), Expect = 3.780e-185
Identity = 286/582 (49.14%), Postives = 382/582 (65.64%), Query Frame = 1
Query:   10 KFEKDGTLPAGV---DSDPEHMELRTILEDPVGQKYIGAFAKKTLTHESFFAWTEIQEYRSIPTADYQRGMAMHIYQKYIKEGAILQLGCVKPADRQCIKAVLDQSKYDASVTNNQLYDKVQQAVFIEMYHNTFQRFKVSDEYSEMRKMLRETYNRVCLSDFDYIAQIGEGGFGRVVHVRKKSTMAHLAMKIQLKTALLETFSDDPNRIDNERRVLAATYHPFIVGMNYAFQTETLAIMVLDLVTCGDLQEAINQAPNKRLNEVRVQFYVAEIILALSHLHELGLMFRDLKPCNVLLGQDGHVKLTDMGGVAEFAKGTCLDPMDSCSGSSPYMMEIGGQRKGNTEARKLSQSHRRRSIMGTHGYMAPEMVILLSQPRAVRKGYTKAVDFWSLGVTMYKLLTGVRPFENKRF-----------------LNEILTEVRFPPYMSAEAKDLVIRLLDGNEHRRLGASPELLAELKAHPFFNGIDWVRLSVRHMIPPYVPDAKPLEQTPQYASFDALMEAYRTQDEADRSGGTPMCDWTQKPSPADQRFFQSWDFISMQTLKIEMGIANEMVSHDTNFKVRQLMG 1695
            KF++DG+L       + +  H+E R IL+DP+GQ+Y+G FAK   THE FF W ++QE+++IPT DY+R  AMHIY KY+K GA+L+LG V P +++  K ++++++ D SV    ++D + Q VF+++YHNTF  FK SD+Y E RK +RETYN+V + DF+Y+ ++GEGGFGRVVH RK ST  H AMKIQLKTALL+TF DDP R+D E+ V AA +HPFIV ++YAFQT + AI+ L LVT GDLQE + + P+KRL+E RV  Y AE++LAL HLHELGLM+RDLKPCNVLLG DGHV+L DMGGVA+F KG  LD  +  +                         +RRRSIMGT GYMAPE++ L+S   A RKGYT+AVDFWSLGVT+YKLL G RPF+   +                  + +L  + FP ++S    +L+I L+  +   RLG++ E +  L  H FFNG+D+++L  +H+   Y PD +   + P Y S+  +MEA    D  DRS      DW   PS   QR F  WDF+S  TLK+EMGIA EM  HDTN KV+Q++G
Sbjct:   41 KFQEDGSLSKKKKVSEINEGHIECRDILDDPIGQRYVGQFAKSNFTHEHFFCWIDMQEFKAIPTKDYRRSKAMHIYDKYLKVGAVLELGSVAPQEKERFKGIVERARGDKSVVTPNMFDDIWQMVFVDIYHNTFIPFKRSDKYEEYRKEIRETYNKVSVDDFEYMEKLGEGGFGRVVHCRKISTGKHYAMKIQLKTALLDTFWDDPTRLDAEKSVFAACHHPFIVSLDYAFQTPSHAILALGLVTAGDLQEIMEKEPSKRLDEDRVVLYTAEVVLALQHLHELGLMYRDLKPCNVLLGADGHVQLADMGGVADF-KGNVLDHRNEKADDDGV--------------------YRRRSIMGTRGYMAPEVLDLMSAVSA-RKGYTQAVDFWSLGVTVYKLLCGTRPFDMSSYDVLLEYSSEQKQQKQAEYDNLLHRIYFPTFISDAGCELIIGLMALHPEDRLGSNAEGVDGLTQHAFFNGMDFIKLGQKHLDAAYKPDVQLPSEKPMYPSYSTMMEAITGPD--DRSN----FDWESVPSDRQQRHFDEWDFVSPHTLKVEMGIAGEMAVHDTNLKVQQILG 594          
BLAST of jgi.p|Trimin1|177062 vs. uniprot
Match: D7FP09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP09_ECTSI)

HSP 1 Score: 432 bits (1110), Expect = 1.260e-140
Identity = 251/588 (42.69%), Postives = 355/588 (60.37%), Query Frame = 1
Query:   13 FEKDGTLPAGVDSDPEHMELRTILEDPVGQKYIGAFAKKTLTHESFFAWTEIQEYRSIPTADYQRGMAMHIYQKYIKEGAILQLGCVKPADRQCIKAVLDQSKYDASVTNNQLYDKVQQAVFIEMYHNTFQRFK--VSDEYSEMRKMLRETYNRVCLSDFDYIAQIGEGGFGRVVHVRKKSTMAHLAMKIQLKTALLETFSDDPNRIDNERRVLAATYHPFIVGMNYAFQTETLAIMVLDLVTCGDLQEAINQAPNKRLNEVRVQFYVAEIILALSHLHELGLMFRDLKPCNVLLGQDGHVKLTDMGGVAEFAKGTCLDPMDSCSGSSPYMMEIGGQRKGNTEARKLS-QSHRRRSIMGTHGYMAPEMVILLSQPRAVRKGYTKAVDFWSLGVTMYKLLTGVRPFE---------------NKRFLNEILTEVRFPPYMSAEAKDLVIRLLDGNEHRRLGASPELLAELKAHPFFNGIDWVRLSVRHMIPPYVPDAKPLEQTPQYASFDALMEAYRTQDEADRSGGTPMCDWTQKPSPADQRFFQSWDFISMQTLKIEMGIANEMVSHDTNFKVRQLMGDPGDSSKAS 1722
            F K   LP   +   E++EL  +L  PVGQ ++G F+ +  T    FAW++IQEYR+IPT DY+   A  I+ KY++  A   L  +     + I   LDQ++ D ++    L+ +VQ+  F  ++  TFQ  K   +  Y   ++     +NR+ ++DF Y+ ++GEG FG+VVHV KKST  H AMKIQ KT LL +F+   +R+DNE+ V  A  HPF++ M+YAFQTE  AI+VL+LVT G+LQ+AI+ +P KRL+E R +FY AEI++AL HLH++GLM+RDLKP NV+LG DGH++L DMGGV     G C+  M +         +I  ++ G T  R+ +  + +RRSIMGT GYMAPEM  LL+Q    R+GY +AVD+WSLGVT+YK+LTG RPF+                +    ++  EV +P YMS  A   V  LL  + H RLG+ P     +K+H F  GI W RL+ +++ PPY+P   P+   P Y SF+ +ME      EAD        +  +K SP DQ++F +W +IS QTL+IEMG+A  M   + NFKV QL G+   S+ AS
Sbjct:   38 FTKSPILPDDREDITEYVELLAMLHSPVGQNFLGRFSMEIGTQHVLFAWSDIQEYRAIPTVDYRFTKAKQIFGKYLRASATA-LDFLPEGLGEEIYNCLDQAREDKNLLGPDLFLQVQKVCFRHIFEFTFQELKNNYARRYEAYQEEGASRFNRIGVNDFWYMEKLGEGAFGKVVHVVKKSTGRHYAMKIQHKTELLRSFARSLSRLDNEKMVFQACNHPFVLQMDYAFQTELHAIIVLNLVTTGNLQDAIDSSPKKRLDEPRARFYAAEIVIALIHLHDMGLMYRDLKPRNVMLGMDGHIQLADMGGV-----GDCIGDMSA--------RKI--RKHGTTVKRRGTLMNFKRRSIMGTKGYMAPEMAKLLNQSNDQRQGYDEAVDWWSLGVTVYKMLTGARPFDPPPWARKQSVVAMLRRQTEFEKLQAEVEYPRYMSEAAVSFVSALLRHDVHERLGSGPNGKEGIKSHAFMAGIVWERLAAKNVEPPYIPTQGPVCDEPLYDSFEEMMEGMH---EADARYNKKKRNLNEKVSPDDQKWFATWRYISPQTLRIEMGLAQAMDDIEANFKVMQLTGEGSLSASAS 606          
BLAST of jgi.p|Trimin1|177062 vs. uniprot
Match: A0A7S3GQ14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GQ14_9STRA)

HSP 1 Score: 419 bits (1078), Expect = 4.400e-138
Identity = 222/478 (46.44%), Postives = 306/478 (64.02%), Query Frame = 1
Query:   76 TILEDPVGQKYIGAFAKKTLTHESFFAWTEIQEYRSIPTADYQRGMAMHIYQKYIKEGAILQLGCVKPADRQCIKAVLDQSKYDASVTNNQLYDKVQQAVFIEMYHNTFQRFKVSDEYSEMRKMLRETYNRVCLSDFDYIAQIGEGGFGRVVHVRKKSTMAHLAMKIQLKTALLETFSDDPNRIDNERRVLAATYHPFIVGMNYAFQTETLAIMVLDLVTCGDLQEAINQAPNKRLNEVRVQFYVAEIILALSHLHELGLMFRDLKPCNVLLGQDGHVKLTDMGGVAEFAKGTCLDPMDSCSGSSPYMMEIGGQRKGNTEARKLSQS---------------HRRRSIMGTHGYMAPEMVILLSQPRAVRKGYTKAVDFWSLGVTMYKLLTGVRPFENKRF---------LNEILTE-------------VRFPPYMSAEAKDLVIRLLDGNEHRRLGASPELLAELKAHPFFNGIDW 1398
            T+L+D + Q  IG +AK     + F  W +IQ+Y++IP   Y+R  A+HIY KYIK  A+LQ+G +   +R+  K  LD SK D S+  N  YDK+Q   FI +YHN +  FK++ E+  + + +++ YN V + DF+Y  ++GEGGFG VVH +KKST  H AMK+Q K  LL+ F DDP R D E++  A+  HPFIV ++YAFQT+ LAIMVL L T GDLQ+A+N+A N RL+E RVQFYVAE++LALS+LH++GLM+RDLKP NVLL +DGH++L D+GGVA+   G+ L       G  P   +   ++  +  A + +Q                 R+ SIMGT GYMAPEMV++LSQ    + GYT AVD+WSLGVTM+KLLTG RPF +  F         +N+++ E             + FP +MS +AKDL+ RLLD N+  RLG+ P    +++AHPFF+GIDW
Sbjct:    1 TMLDDALSQNAIGKYAKDLKALDIFMCWIDIQDYKTIPVESYRRSKALHIYHKYIKIDAVLQVGELDMKEREKYKTDLDASKDDPSILTNDFYDKLQSRCFIAVYHNVYIPFKLTAEFKSLHQTIKKKYNNVRMQDFEYYNKLGEGGFGFVVHCKKKSTGKHYAMKLQTKRGLLDCFQDDPWRADFEKQAFASCQHPFIVNLDYAFQTDALAIMVLGLATAGDLQKALNRAENDRLSEDRVQFYVAEMVLALSYLHQMGLMYRDLKPNNVLLNEDGHIQLVDLGGVAD-ESGSTLGQKQEAQGLVPLFTQHFIKKTADYAADQAAQETEGAEATAGTARPPLKRKLSIMGTFGYMAPEMVVMLSQASYEKTGYTCAVDWWSLGVTMFKLLTGYRPFTDDNFNTFVEMATTMNQLVREHCDSPEYAILFQEIPFPSFMSPKAKDLIGRLLDVNDKTRLGSGPNGGKDVRAHPFFDGIDW 477          
BLAST of jgi.p|Trimin1|177062 vs. uniprot
Match: A0A8K1C8Y3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8Y3_PYTOL)

HSP 1 Score: 410 bits (1053), Expect = 1.570e-132
Identity = 239/583 (40.99%), Postives = 340/583 (58.32%), Query Frame = 1
Query:   37 AGVDSDPE--HMELRTILEDPVGQKYIGAFAKKTLTHESFFAWTEIQEYRSIPTADYQRGMAMHIYQKYIKEGAILQLGCVKPADRQCI--KAVLDQSKYDASVTNNQLYDKVQQAVFIEMYHNTFQRFKVSDEYSEMRKMLRETYNRVCLSDFDYIAQIGEGGFGRVVHVRKKSTMAHLAMKIQLKTALLETFSDDPNRIDNERRVLAATYHPFIVGMNYAFQTETLAIMVLDLVTCGDLQEAINQAPNKRLNEVRVQFYVAEIILALSHLHELGLMFRDLKPCNVLLGQDGHVKLTDMGGVAEFAKGTCLDPMDSCSGSSPYMMEIGGQRKGNTEARKLSQSHRRRSIMGTHGYMAPEMVILLSQPRAVRKGYTKAVDFWSLGVTMYKLLTGVRPFE---NKRFLNEILTE---------------------VRFPPYMSAEAKDLVIRLLDGNEHRRLGASPEL-LAELKAHPFFNGIDWVRLSVRHMIPPYVPDAKPLEQTPQYASFDALMEAYRTQDEADRSGGTPMCDWTQKPSPADQRFFQSWDFISMQTLKIEMGIANEMVSHDTNFKVRQLMGD 1698
            AG  ++P     EL  IL DPVGQK+IG FAKK +T E+FF W EI+E+R  P+  Y++ +A  IY+KYIK GA + LG +  AD   +  K + D  + DA++     +D++   +  +M  NT+ RFK S EY   +K +++TYN+V + DF+Y+  +G GGFGRVVH RKKST  H AMKIQLKT LL+   D  ++I +E+ +L   ++PF++ M+Y+FQT   AI+V +LV  GDL EA+  +    + E RV+ Y AEI LAL+H+H+LGL++RDLKP NVLLG+DGHV L DMG  A +  G  L   D+  G++ Y+ +              ++  RR++ +GT GYMAPE++      R  R GYT AVD+WSLGVT+++LL G +PF       F  E+  E                     V FPP++S  A+D + RLL+ N   RLG SPE    E   H FF  +DW +L ++H+ P + P   PL     Y S+D +M  +  +D+          DW   P P  Q+ F SWD+IS  TL+ E+GIA E+   +  +KV QL G+
Sbjct:   49 AGTSAEPTGPEQELLAILNDPVGQKHIGIFAKKIMTAETFFCWVEIKEFRDAPSIGYRKSLAKLIYKKYIKNGAPMALGSIT-ADIIALYDKKITDMER-DATLMTPDFFDRLMTLITTDMVQNTYLRFKTSSEYDIYKKEMKDTYNKVTVEDFEYLELLGSGGFGRVVHARKKSTGKHYAMKIQLKTGLLDEHHDQLSQITSEKDILQICHNPFVLDMHYSFQTSAHAIIVTELVRGGDLGEALKSSREGYITEDRVRLYAAEIGLALNHMHDLGLIYRDLKPGNVLLGEDGHVVLADMGLAAGYDPGN-LKKDDN--GNTKYVPQN-------------AKFTRRKTTVGTRGYMAPEIISGKLVKRDQRPGYTHAVDYWSLGVTIFELLCGFQPFSVYSGGNFFQEVANEEIFRLSPRTQHKIELQKMAQGVTFPPHLSKNAQDFLRRLLEVNAEIRLGCSPEKGFQEFMDHAFFEVVDWEKLMMKHIDPKFKPTLPPLTDKKIYNSYDHMMSHFDMRDK-----DFIRHDWYADPDPEMQKHFDSWDYISQYTLRAELGIAKELDETNIPYKVLQLTGE 608          
BLAST of jgi.p|Trimin1|177062 vs. uniprot
Match: F0WFN3_9STRA (Protein kinase putative n=2 Tax=Albugo TaxID=65356 RepID=F0WFN3_9STRA)

HSP 1 Score: 407 bits (1047), Expect = 1.400e-131
Identity = 235/587 (40.03%), Postives = 341/587 (58.09%), Query Frame = 1
Query:   28 TLPAGVDSDPEHMELRTILEDPVGQKYIGAFAKKTLTHESFFAWTEIQEYRSIPTADYQRGMAMHIYQKYIKEGAILQLGCVKPAD-----RQCIKAVLDQSKYDASVTNNQLYDKVQQAVFIEMYHNTFQRFKVSDEYSEMRKMLRETYNRVCLSDFDYIAQIGEGGFGRVVHVRKKSTMAHLAMKIQLKTALLETFSDDPNRIDNERRVLAATYHPFIVGMNYAFQTETLAIMVLDLVTCGDLQEAINQAPNKRLNEVRVQFYVAEIILALSHLHELGLMFRDLKPCNVLLGQDGHVKLTDMGGVAEFAKGTCLDPMDSCSGSSPYMMEIGGQRKGNTEARKLSQSHRRRSIMGTHGYMAPEMVILLSQPRAVRKGYTKAVDFWSLGVTMYKLLTGVRPF------------------------ENKRFLNEILTEVRFPPYMSAEAKDLVIRLLDGNEHRRLGASPEL-LAELKAHPFFNGIDWVRLSVRHMIPPYVPDAKPLEQTPQYASFDALMEAYRTQDEADRSGGTPMCDWTQKPSPADQRFFQSWDFISMQTLKIEMGIANEMVSHDTNFKVRQLMGD 1698
            T    VD      EL  ++ DPVGQK++GA+AKK LT E+FF W EI ++R  P+  Y++ +A  I++KYIK G+ + LG + P+D        IKA+    + + S+    L+D + + V  +MY +TF RFK S EY   RK ++ETYNRV + DF+Y+  +G GGFGRVVH RKKST  H AMK+QLK  LL+ + D   +I +E+ +L A ++PF++ M+Y+FQT   AI+V +LV  GDL  A+  +    L+E RV+ Y AEI LAL+H+HELGL++RDLKP NVLLG+DGH+ L DMG  A F   TCL  ++                 G        +  RR++ +GT GYMAPE++      R+ R GYT A+D+WSLGVT+Y+LLTG +PF                        +++  L ++     +P ++S   ++ + +LL+ N  +RLG SP+   AE   HPFF+ IDW +L V+H+ P Y P   PL     Y S+  +M  +  +D+          DW + P    Q+ F SWD+IS  TL+ E+GIANE+ + +  +KV QL G+
Sbjct:   43 TTRNSVDVKSNEQELLAVVSDPVGQKHLGAYAKKILTSETFFCWVEINDFRDAPSLGYRKSLAKLIHKKYIKSGSPMALGSL-PSDVVAHYENHIKAM----ETNESIVTPDLFDLLMKYVLSDMYQSTFVRFKASAEYDLYRKEVKETYNRVTVDDFEYLELLGSGGFGRVVHARKKSTGKHYAMKVQLKAGLLDEYQDQLAQITSEKDILQACHNPFVLDMHYSFQTPAHAIIVSELVRGGDLGSALASSRESHLSEDRVRLYAAEIGLALNHMHELGLIYRDLKPVNVLLGEDGHIVLADMGLAAGFD--TCLLKVNE---------------DGTRVTPATPKLTRRKTTVGTKGYMAPEIIAGKLVKRSQRPGYTFAIDYWSLGVTIYELLTGYQPFGVHSSQYVLQQVAQEDMFRMSPRTQHQLELQKMAQGTNYPSHLSRVVQEFLQQLLEVNPDQRLGCSPDHGFAEFMGHPFFDSIDWEKLMVKHIDPTYRPALPPLTDKKIYNSYQQMMGQFDARDK-----DYIRHDWYKTPPSDMQKHFDSWDYISSHTLRAELGIANELDATNIPYKVLQLTGE 602          
BLAST of jgi.p|Trimin1|177062 vs. uniprot
Match: A0A485LAK1_9STRA (Aste57867_18091 protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LAK1_9STRA)

HSP 1 Score: 406 bits (1043), Expect = 9.760e-131
Identity = 239/612 (39.05%), Postives = 337/612 (55.07%), Query Frame = 1
Query:   58 EHMELRTILEDPVGQKYIGAFAKKTLTHESFFAWTEIQEYRSIPTADYQRGMAMHIYQKYIKEGAILQLG-----CVKPADRQCIKAVLDQSKYDASVTNNQLYDKVQQAVFIEMYHNTFQRFKVSDEYSEMRKMLRETYNRVCLSDFDYIAQIGEGGFGRVVHVRKKSTMAHLAMKIQLKTALLETFSDDPNRIDNERRVLAATYHPFIVGMNYAFQTETLAIMVLDLVTCGDLQEAINQAPNKRLNEVRVQFYVAEIILALSHLHELGLMFRDLKPCNVLLGQDGHVKLTDMG-----------------GVAEFAKGTCLDPMDSCSGSSPYMMEIGGQR-------KGNTEARKLSQSH---------RRRSIMGTHGYMAPEMVILLSQPRAVRKGYTKAVDFWSLGVTMYKLLTGVRPFE-----NKRFLNEILTEVR----------------------FPPYMSAEAKDLVIRLLDGNEHRRLGASPELLAELKAHPFFNGIDWVRLSVRHMIPPYVPDAKPLEQTPQYASFDALMEAYRTQDEADRSGGTPMCDWTQKPSPADQRFFQSWDFISMQTLKIEMGIANEMVSHDTNFKVRQLMGD 1698
            +  EL ++L DPVGQK+IG +AKK LT ESF+ W EI EY+  P++ YQR +A HIY+KYI++GA + LG      V   D +   AV+D    +  V N   +  +Q+  F +M  NT+ RFK S E+   +  L++TYN+V + DFDY+  +G GGFGRVVH RKKST  H AMKIQLK  LL    D  ++I +E+ +L    HP+I+ M+Y+FQT   AI+V +LV  GDL E +  +    L E RV+ Y AEI LAL+HLHELGL++RDLKPCNVLLG+DGH+ L DMG                  V E +  T     D    ++P  +     +         N++ + + +S          RR++ +GT GYMAPE++      R  R GY   +D+WSLGVT+Y+L+ G +PF         FL EI  EV                       +P Y+S EA+D + +LLD N   R+G +     ++  HP+F  +DW RL V+H+ P + P  KPL     Y++F  +M  +  +D+          DW Q P P  Q+ F+ WD+IS  TLK E+GIA EM   +  +K+ QL G+
Sbjct:   34 DEAELTSMLNDPVGQKHIGNYAKKILTSESFYCWIEILEYQDAPSSGYQRSVAKHIYKKYIRDGASMALGGLTREIVSLYDEKL--AVIDS---EPGVINQDFFAPIQKLCFDDMCRNTYHRFKTSPEFDLYKLELKDTYNKVTVDDFDYLELLGSGGFGRVVHARKKSTGKHYAMKIQLKNGLLHEHQDQLDQITSEKDILQICNHPYILDMHYSFQTSAHAIIVTELVRGGDLNELMKTSKKGYLPEGRVRLYAAEIALALNHLHELGLIYRDLKPCNVLLGEDGHIVLADMGLATGLEEIRAKKRERERAVVEKSHSTGEAGSDEKENAAPVPLSEADAKHEEVVPASTNSQLQNIPKSFARPPDAKHTRRKTTVGTKGYMAPELISGKLLRREERPGYNYTIDYWSLGVTVYELVCGYQPFNLYNVLGDGFLAEIAQEVEVAKLSPRSQYRAELERMAAGVDYPDYVSEEARDFINKLLDVNASCRMGCTSRGFLDIMEHPYFKDLDWERLMVKHVQPEFTPTLKPLTDRKTYSNFWNMMAHFDARDKH-----FIRHDWYQDPPPEKQKAFEHWDYISPHTLKAELGIAAEMDESNRPYKILQLTGE 635          
BLAST of jgi.p|Trimin1|177062 vs. uniprot
Match: A0A024U193_9STRA (AGC protein kinase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U193_9STRA)

HSP 1 Score: 405 bits (1041), Expect = 3.490e-130
Identity = 239/607 (39.37%), Postives = 340/607 (56.01%), Query Frame = 1
Query:   58 EHMELRTILEDPVGQKYIGAFAKKTLTHESFFAWTEIQEYRSIPTADYQRGMAMHIYQKYIKEGAILQLGCVKPADRQCIKAVLDQ--SKYDASVTNNQLYDKVQQAVFIEMYHNTFQRFKVSDEYSEMRKMLRETYNRVCLSDFDYIAQIGEGGFGRVVHVRKKSTMAHLAMKIQLKTALLETFSDDPNRIDNERRVLAATYHPFIVGMNYAFQTETLAIMVLDLVTCGDLQEAINQAPNKRLNEVRVQFYVAEIILALSHLHELGLMFRDLKPCNVLLGQDGHVKLTDMG---GVAEF----------AKGTCLDPMDSCSGSSPYMMEIGGQRKG---------NTEARKLSQSH---------RRRSIMGTHGYMAPEMVILLSQPRAVRKGYTKAVDFWSLGVTMYKLLTGVRPFE-----NKRFLNEILTEVR----------------------FPPYMSAEAKDLVIRLLDGNEHRRLGASPELLAELKAHPFFNGIDWVRLSVRHMIPPYVPDAKPLEQTPQYASFDALMEAYRTQDEADRSGGTPMCDWTQKPSPADQRFFQSWDFISMQTLKIEMGIANEMVSHDTNFKVRQLMGD 1698
            +  EL  +L DPVGQK+IG +AKK LT ESF+ W EI E+R  P++ YQR +A HIY+KYI+EGA + LG +    R+ + A  DQ  +  D ++ N   +  +Q+  F +M  NT+ RFK S E+   +  L++TYN+V + DFDY+  +G GGFGRVVH RKKST  H AMKIQLK  LL    D  ++I +E+ +L    HP+I+ M+Y+FQT   AI+V +LV  GDL E +  +    L E RV+ Y AEI LAL+HLHELGL++RDLKPCNVLLG+DGH+ L DMG   G+ E           A     D  +    SS  + +   Q++          N++ + + +S          RR++ +GT GYMAPE++      R  R GY   +D+WSLGVT+Y+L+ G +PF         FL EI  EV                       +P Y+S + +D + +LLD N   R+G +     ++  HP+F  +DW RL V+H+ P + P  KPL     Y++F  +M  +  +D+          DW Q P P  Q+ F+ WD+IS  TLK E+GIA EM   +  +K+ QL G+
Sbjct:   59 DEAELNNMLNDPVGQKHIGNYAKKILTSESFYCWIEILEFRDAPSSGYQRSVAKHIYKKYIREGASMALGGLT---REMV-ADYDQKLAVIDTALINQDFFAPIQKLCFDDMCRNTYHRFKSSPEFDLYKLELKDTYNKVTVDDFDYLELLGSGGFGRVVHARKKSTGKHYAMKIQLKNGLLHEHQDQLDQITSEKDILQICNHPYILDMHYSFQTSAHAIIVTELVRGGDLNELMKTSKKGYLPEGRVRLYAAEIALALNHLHELGLIYRDLKPCNVLLGEDGHIVLADMGLATGLEEIRAKKREKERLAANESKDT-EEAPASSRQLTDAEEQKRRDEENAAPSTNSQLQNIPKSFARPPDAKYTRRKTTVGTKGYMAPELISGKLLRREERPGYNYTIDYWSLGVTVYELVCGYQPFNLYNVLGDGFLAEIAQEVEVAKLSPRSQYRAELERMAAGVDYPEYVSEDVRDFINKLLDVNASSRMGCTARGFLDIMEHPYFKDLDWERLMVKHVQPEFTPTVKPLTDRKTYSNFWNMMAHFDARDKH-----FIRHDWYQDPPPEKQKAFEHWDYISPHTLKAELGIAAEMDESNRPYKILQLTGE 655          
BLAST of jgi.p|Trimin1|177062 vs. uniprot
Match: A0A0P1B3D1_PLAHL (Agc protein kinase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B3D1_PLAHL)

HSP 1 Score: 404 bits (1039), Expect = 3.650e-130
Identity = 240/581 (41.31%), Postives = 337/581 (58.00%), Query Frame = 1
Query:   46 DSDPEHMELRTILEDPVGQKYIGAFAKKTLTHESFFAWTEIQEYRSIPTADYQRGMAMHIYQKYIKEGAILQLGCVKPA-----DRQCIKAVLDQSKYDASVTNNQLYDKVQQAVFIEMYHNTFQRFKVSDEYSEMRKMLRETYNRVCLSDFDYIAQIGEGGFGRVVHVRKKSTMAHLAMKIQLKTALLETFSDDPNRIDNERRVLAATYHPFIVGMNYAFQTETLAIMVLDLVTCGDLQEAINQAPNKRLNEVRVQFYVAEIILALSHLHELGLMFRDLKPCNVLLGQDGHVKLTDMGGVAEFAKGTCLDPMDSCSGSSPYMMEIGGQRKGNTEARKLSQSHRRRSIMGTHGYMAPEMVILLSQPRAVRKGYTKAVDFWSLGVTMYKLLTGVRPFEN------------------------KRFLNEILTEVRFPPYMSAEAKDLVIRLLDGNEHRRLGASPEL-LAELKAHPFFNGIDWVRLSVRHMIPPYVPDAKPLEQTPQYASFDALMEAYRTQDEADRSGGTPMCDWTQKPSPADQRFFQSWDFISMQTLKIEMGIANEMVSHDTNFKVRQLMGD 1698
            D+     EL  +L DPVGQK+IGAFAKK +T E+FF W EI+E+R  P++ Y++ MA  IY+KYIK G+ + LG +        D+Q   A LD + + AS T +  +D +   +  +M  NTF RFK S EY   +K L++TYN+V + DF+Y+  +G GGFGRVVH RKKST  H AMKIQLKT LL+   D  ++I +E+ +L   ++PF++ M+Y+FQT   AI+V +LV  GDL +A+       ++E RV+ Y AEI LAL+H+HELGL++RDLKP NVLLG+DGHV L DMG        T  DP+           E  G+        KL+   RRR+ +GT GYMAPE+V      R  R+GYT A+DFWSLGVTM++LL G RPF +                        K  L  +   V FP ++S  A+D + RLL+     RLG + E    E   HPFF  IDW +L ++H+ P + P  + L     + S++ +M  + T+D+          DW   P P  Q++F +W+FIS+ TL+ E+GIA E+   +  +KV QL G+
Sbjct:   71 DTSTNEQELLQLLHDPVGQKHIGAFAKKIMTSETFFCWVEIKEFREAPSSGYRKSMAKLIYRKYIKNGSTMALGSITSDLITHYDKQI--AELD-TNHGASATLD-FFDPLMANIVADMCQNTFIRFKASPEYEAFKKDLKDTYNKVTIEDFEYLEVLGSGGFGRVVHARKKSTGKHYAMKIQLKTGLLDEHHDQLSQITSEKDILQICHNPFVLDMHYSFQTSAHAIIVTELVRGGDLSDALKACREGYIHEDRVRLYAAEIGLALNHMHELGLLYRDLKPGNVLLGEDGHVILADMG------LATGFDPLK-------LQKEESGEFWYTAIQPKLT---RRRTTVGTRGYMAPEIVSGKLMKRNERQGYTYAIDFWSLGVTMFELLCGFRPFTSPSTGNYFQDLANDETYGLSPRSQLKIELERMAQCVTFPSHVSPNAQDFLKRLLEVLPENRLGCNDEKGFVEFIEHPFFETIDWEKLMMKHIDPTFKPAVQLLSDKRIFNSYEQMMSYFDTRDK-----DFSRYDWYADPDPEMQKYFDNWEFISLNTLRAELGIAKELDEMNIPYKVLQLTGE 626          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|177062 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZAC1_9STRA0.000e+0100.00Kinase-like domain-containing protein n=1 Tax=Trib... [more]
D8LEF7_ECTSI3.190e-21857.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1U415_9STRA3.780e-18549.14Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
D7FP09_ECTSI1.260e-14042.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3GQ14_9STRA4.400e-13846.44Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A8K1C8Y3_PYTOL1.570e-13240.99Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0WFN3_9STRA1.400e-13140.03Protein kinase putative n=2 Tax=Albugo TaxID=65356... [more]
A0A485LAK1_9STRA9.760e-13139.05Aste57867_18091 protein n=2 Tax=Aphanomyces TaxID=... [more]
A0A024U193_9STRA3.490e-13039.37AGC protein kinase n=2 Tax=Aphanomyces invadans Ta... [more]
A0A0P1B3D1_PLAHL3.650e-13041.31Agc protein kinase n=1 Tax=Plasmopara halstedii Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_145contigContig_145:358692..364551 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|177062|e_gw1.145.66.1
BRITEko00000,ko00001,ko01000,ko01001
KEGG Pathwayko04068,ko04151,map04068,map04151
KEGG koko:K13303
EC2.7.11.1
Descriptionprotein serine/threonine kinase activity
COG categoryG
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0603@1|root,KOG0603@2759|Eukaryota
Evalue5.23e-219
Seed ortholog2880.D8LEF7
Hectar predicted targeting categoryother localisation
TranscriptId177384
TrackFilteredModels1
ProteinId177062
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|177062gene_15230Tribonema minus UTEX_B_3156 geneContig_145 358692..364551 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|177062Trimin1|177062|e_gw1.145.66.1Tribonema minus UTEX_B_3156 polypeptideContig_145 358692..364551 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_15230_1exon_15230_1Tribonema minus UTEX_B_3156 exonContig_145 358692..358837 +
exon_15230_2exon_15230_2Tribonema minus UTEX_B_3156 exonContig_145 360030..360144 +
exon_15230_3exon_15230_3Tribonema minus UTEX_B_3156 exonContig_145 361120..361496 +
exon_15230_4exon_15230_4Tribonema minus UTEX_B_3156 exonContig_145 361767..362025 +
exon_15230_5exon_15230_5Tribonema minus UTEX_B_3156 exonContig_145 363078..363323 +
exon_15230_6exon_15230_6Tribonema minus UTEX_B_3156 exonContig_145 363567..363657 +
exon_15230_7exon_15230_7Tribonema minus UTEX_B_3156 exonContig_145 363766..363770 +
exon_15230_8exon_15230_8Tribonema minus UTEX_B_3156 exonContig_145 363991..364551 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_15230CDS_15230Tribonema minus UTEX_B_3156 CDSContig_145 358692..358837 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_15230 ID=mRNA_15230|Name=jgi.p|Trimin1|177062|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1800bp|location=Sequence derived from alignment at Contig_145:358692..364551+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGTTGAGAAGTTTGAGAAGGATGGCACGCTCCCCGCAGGAGTTGACAG
TGATCCAGAACACATGGAACTGCGGACTATACTGGAGGACCCAGTGGGGC
AGAAGTACATCGGTGCTTTTGCTAAGAAGACACTCACTCATGAGAGCTTC
TTTGCCTGGACTGAGATACAAGAGTACCGCAGCATACCCACTGCTGACTA
TCAGAGGGGCATGGCGATGCATATATACCAAAAGTACATCAAGGAGGGGG
CCATATTACAGCTCGGCTGTGTCAAGCCTGCGGACCGTCAATGCATCAAA
GCAGTGCTCGACCAGTCTAAGTACGATGCCTCTGTCACCAACAACCAGCT
CTACGACAAGGTGCAGCAGGCCGTGTTCATTGAGATGTACCACAACACCT
TCCAACGATTCAAGGTGTCTGATGAGTACAGCGAGATGCGCAAGATGCTG
CGCGAGACATACAACCGCGTGTGTCTCAGTGACTTCGACTACATTGCGCA
GATAGGGGAGGGGGGCTTTGGCAGGGTGGTACATGTACGCAAGAAGAGCA
CCATGGCGCATCTGGCCATGAAGATACAGCTCAAGACGGCGTTGTTGGAG
ACATTCAGCGATGACCCCAACCGGATAGACAACGAGCGGCGAGTTCTGGC
GGCCACGTACCACCCCTTCATTGTGGGCATGAATTACGCTTTCCAGACGG
AAACGCTTGCCATCATGGTGCTGGACCTGGTGACATGCGGGGACCTGCAG
GAGGCCATCAACCAAGCTCCAAACAAGCGTCTCAATGAAGTGCGCGTCCA
GTTCTACGTGGCAGAAATCATTCTTGCGCTGAGCCACCTGCATGAGCTAG
GGCTTATGTTCAGGGACTTGAAACCGTGCAACGTTCTGCTGGGGCAGGAT
GGACACGTCAAGCTGACGGACATGGGCGGTGTAGCCGAGTTTGCAAAAGG
CACATGCCTTGACCCCATGGATTCATGCTCAGGGTCAAGCCCATACATGA
TGGAGATTGGAGGGCAGCGCAAAGGCAACACGGAGGCACGAAAGCTGTCA
CAATCTCACCGGCGGCGAAGTATCATGGGCACACATGGCTACATGGCGCC
TGAAATGGTGATCCTTCTGAGTCAGCCAAGGGCTGTGCGCAAGGGATACA
CCAAGGCGGTGGACTTCTGGTCATTAGGAGTGACCATGTACAAGCTGCTC
ACGGGAGTGCGACCCTTTGAGAACAAGCGGTTCCTGAATGAGATCCTCAC
GGAGGTGCGCTTCCCGCCCTACATGAGTGCCGAGGCGAAGGACCTGGTCA
TTCGCCTCCTGGATGGCAATGAACATAGGCGCCTAGGAGCCTCGCCAGAG
CTGCTCGCTGAGCTCAAGGCACACCCTTTCTTCAATGGCATAGACTGGGT
GAGGCTCAGTGTGCGGCATATGATTCCTCCCTACGTTCCCGACGCCAAGC
CCCTGGAACAAACGCCACAGTACGCATCGTTTGATGCACTGATGGAGGCT
TACCGCACACAGGACGAGGCTGATAGGAGTGGGGGCACGCCCATGTGTGA
TTGGACGCAGAAGCCATCGCCCGCAGACCAACGCTTCTTCCAGTCATGGG
ACTTCATATCTATGCAGACGCTCAAGATCGAGATGGGCATTGCAAATGAG
ATGGTGTCTCATGACACAAACTTCAAGGTCCGGCAGCTCATGGGCGATCC
AGGGGACTCCTCCAAAGCGAGTCCTCGTGGCGTGTTCATATTGCGACATG
CCAACAGCATGAGTGCGAGCCGGGGCAATAAGCTGGGCAAGAGCATGTAG
back to top

protein sequence of jgi.p|Trimin1|177062

>Trimin1|177062|e_gw1.145.66.1 ID=Trimin1|177062|e_gw1.145.66.1|Name=jgi.p|Trimin1|177062|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=600bp
MVEKFEKDGTLPAGVDSDPEHMELRTILEDPVGQKYIGAFAKKTLTHESF
FAWTEIQEYRSIPTADYQRGMAMHIYQKYIKEGAILQLGCVKPADRQCIK
AVLDQSKYDASVTNNQLYDKVQQAVFIEMYHNTFQRFKVSDEYSEMRKML
RETYNRVCLSDFDYIAQIGEGGFGRVVHVRKKSTMAHLAMKIQLKTALLE
TFSDDPNRIDNERRVLAATYHPFIVGMNYAFQTETLAIMVLDLVTCGDLQ
EAINQAPNKRLNEVRVQFYVAEIILALSHLHELGLMFRDLKPCNVLLGQD
GHVKLTDMGGVAEFAKGTCLDPMDSCSGSSPYMMEIGGQRKGNTEARKLS
QSHRRRSIMGTHGYMAPEMVILLSQPRAVRKGYTKAVDFWSLGVTMYKLL
TGVRPFENKRFLNEILTEVRFPPYMSAEAKDLVIRLLDGNEHRRLGASPE
LLAELKAHPFFNGIDWVRLSVRHMIPPYVPDAKPLEQTPQYASFDALMEA
YRTQDEADRSGGTPMCDWTQKPSPADQRFFQSWDFISMQTLKIEMGIANE
MVSHDTNFKVRQLMGDPGDSSKASPRGVFILRHANSMSASRGNKLGKSM*
back to top

mRNA from alignment at Contig_145:358692..364551+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_15230 ID=mRNA_15230|Name=jgi.p|Trimin1|177062|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5860bp|location=Sequence derived from alignment at Contig_145:358692..364551+ (Tribonema minus UTEX_B_3156 )
ATGGTTGAGAAGTTTGAGAAGGATGGCACGCTCCCCGCAGGAGTTGACAG TGATCCAGAACACATGGAACTGCGGACTATACTGGAGGACCCAGTGGGGC AGAAGTACATCGGTGCTTTTGCTAAGAAGACACTCACTCATGAGAGGTCA GTGCTTGTGGACAAACAACTGGCAGCATTGTACGCATGATGCATAGCGCT GGATCAGCATGAGTGTCCATGTGTTATTGTTTGCCTCTCCTCTTTGTGTG GATTCTTCAAAGTATAACAAGAAGGCACAATTCTGATAGTGCCATATTCA GGCAGATGTTCACCGAAAGCTTGCCAACTGTTTGCACAGGTACAAACTGA AAGGCATCCAAACTGCATACCTGCAAGTGCGGTCCTTCAACCTTTTGTTG ACCATAGAAGCTGTCATGTTGGTGATTTACCTGTTAGCATATGCCATGGA CTCTCACGAAGTACGAGATTTAAGGGTCCAATCAAGGAAGCCACCATGAG ACTGTCATGTGACACACCGACACCAATTTACAACAGTACGTACGTGCGAA CCAAGTCCCATGCTGTGCTGTGTGCACACTGCCACCATCTGGCACAAGGG TAAACTCATTCCAGCAGTACCTGAATGCATAAAAAGTGGCCGTAAAGATA CCCTGAGTCCGCTACAGAATACCAGGAGGTGACATAGCTTCAGTGCCAGT GCCAGGCTCTGTTGTTATTCGCCATGGCCTTTCTTTCTGATAGACATAAG TAGTTGTGGCATTATGCAATGCAGCCTTCATCAGCTTTGCCGTGCTTAGC GAATCTACTTCCGGAAGGCACTTGACAATCAATCTACGAACAATGCGTTG GCACAGCACGCACACGCATGTGCCATGTCGTTGTCATATCATTCATTGTC ATCATTGATTAAGCTCAAACGTCACCCAAACATCTGAGACCTCTGGAGCC GTATCGTACACGATGCAATGAAAAGGTTGTTGCAGCAGCGCCAAATGACA AGCAACCTGGTGGTGTGACTCACATCATGACTTAACTGGGGCCTTCAGTT TGCACAGCTACAGAAATATGCAGACGCTCAGCGTAAACAGAGATAGAAAA CAAAAAAAGTATGACACAATATTCTGCAGAATTGCAGAATTTTGGTGTGT AGTTTCTTGGCACCTGGTAGTGTTTCGATAAAGGATGCTGGTTGCCATGC AATGCATGTCTCAGACTGGTGGCGCCATGTGCCATGTACAGTTAACCGTT CACTTGCCAAATGCGACAGATCACGGTCCCTTGACACATTCTGTGTTTGT GTCGACACATGGTGTGTTGGCTGTTGTTTTGTCTGCAGCTTCTTTGCCTG GACTGAGATACAAGAGTACCGCAGCATACCCACTGCTGACTATCAGAGGG GCATGGCGATGCATATATACCAAAAGTACATCAAGGAGGGGGCCATATTA CAGGTGGGTGATGTTACAGGTGCCTTGATGCACACAAGTCTCTGTCAATG AGTTTTGACCGTGCTCAATCACCAAAACGCTGTTCACTACAGGGGCGTGT CATGTATATCGGCAAGTCAAGCCCTAAGCACATTGGCTCGAGAGCCCCCT TGAAGGCGCGGGCGTCATTTGGGACTCTGTGCAAAGCAGTGCTCAGCACT GGTGTGTAAGACCGCAGCCCGCCAGCCCTGAAGTCTGCTGGCGCAAAGTG ACATTCTGCTGGCGCAGCGACAGTCACTGCGAACACTGCGTGGAGGAAGT AGACTGCTGATATGCTGCTGCATACACTTTCTCTGAAGGTCATGGCAGGC TGTATCCAACAGACACAAGTTAGACCCTTGCTTCCAGCATATACTTTTCC ATTGCTGTTGCTGCTGCAAAGTAAGGTGGCCGAGTCATGATCCCACTTCC CCAAGGCTTCCCTGCCGCCGTGATCCCTCATCACAGCCTCACGACATTGT GACACACCCCTCCTCAGCGTCACATGTACCCTCGTCTGCCCCCTCACCCG CACCGTCAACCTCTCCAGCTTGGCCATTTTCCTCTTGGCTGTCCTCCTCG TCTTTGTTTTATTCCTTGCCTTCATCCGGCTTTGTGGCCTCTGCAGACAC ACAAAAGTGAATGCGTCACCTCATGGTCGGATTTGGCAAGTTGCTCAGCA CCTGTAGTAAAACCTCCATTAATTTCTACAGCACATGCATTGCCATAGTG CAGCATGCCTCTTGAAGCACTTGATGCATGACATGAGGTACATTTTCTGA ACGTGGCAATGACCTGTGTATAGTACGTGACAGTACATCCGCATGATGTG GTTCAAACAATGGCTTGCCTACATTGCGTTTGTGATTGCATACTTCTACG ATTCGGTAAACGCTGCTGTTGTCTGATGCTTCGGGGTGTGATTCATCACA ATACCAAGCCTTGCTTCTTGCCCTGCAGCTCGGCTGTGTCAAGCCTGCGG ACCGTCAATGCATCAAAGCAGTGCTCGACCAGTCTAAGTACGATGCCTCT GTCACCAACAACCAGCTCTACGACAAGGTGCAGCAGGCCGTGTTCATTGA GATGTACCACAACACCTTCCAACGATTCAAGGTGTCTGATGAGTACAGCG AGATGCGCAAGATGCTGCGCGAGACATACAACCGCGTGTGTCTCAGTGAC TTCGACTACATTGCGCAGATAGGGGAGGGGGGCTTTGGCAGGGTGGTACA TGTACGCAAGAAGAGCACCATGGCGCATCTGGCCATGAAGATACAGCTCA AGACGGCGTTGTTGGAGACATTCAGCGATGACCCCAACCGGATAGACAAC GAGCGGTGAGTGCATGTCTGTCCTGGCAGCTGACCTGCATTGTGTCAAAA GCAATCAACTATAATGTTTGCACTGGCCGCGTTGTGATGTTCATGCATGC TGGAAGGCATATTGTGAAATGGCTGCATCTGCACTACCCAGCAATTGCTT GCATGTTGGAAGCCATTTAATGAGCATTCATTTCGATTTCCTGTGCTCTC AACTGCACAGACCTGCAGTGCTCTTGCATGGCCTCTCAGAATGATCATTC GCTGGCTATGTACCCCTCCAAACAGGCGAGTTCTGGCGGCCACGTACCAC CCCTTCATTGTGGGCATGAATTACGCTTTCCAGACGGAAACGCTTGCCAT CATGGTGCTGGACCTGGTGACATGCGGGGACCTGCAGGAGGCCATCAACC AAGCTCCAAACAAGCGTCTCAATGAAGTGCGCGTCCAGTTCTACGTGGCA GAAATCATTCTTGCGCTGAGCCACCTGCATGAGCTAGGGCTTATGTTCAG GGACTTGAAACCGTGCAACGTTCTGCTGGGGCAGGTGAGGCCATTGTGAC CCTCAACTCAGTGGCTGGTTTGTCAACATTACAATCACGTGCAACATCTG CGAGCTGTATATGCTAAGCTCCAAGCTGGAGCTATGTCAAAGAAAACAGA GTCTGACAAAAGGGGGAGATGCATGGGGCAGGAAATGATAATTTTTCATT GCATGATTGTTGCTTACATACAAAAATCAGAAAAATCAGCATGATTAGAT GTGGCATTTACATCTTTGTGACTAATCTTGTATCGCTCCTGGCAATGCTG CACTCTCATGGCAGTACTCCTTGAGGTGCGCCATAACAAGTCATAACGAA GTCGCCAATGTTATCATCAGCAGGCATGATTTGATTGTGCAGCTGACTGC AAGTGGCCGCTATGAACATCTGAAGATGTGCAAATTGGCATCGCCAGCAG CTGCAGAGCGGAGACGAAACTTGATGAGCACCATATTGCTCAGTTGAGCG CATGTGCACACCTATGCAAAATTATGTTTGACTGCTCGTCATAAGTGCAT GCCTGTAACTGAGAGACGCAGAGTGCATCATGGTGTTCTCAGTAGAAGCA TGGCTGCTGGCCTGTGTAGCATCGCTTTTTAGCGCCCGAGCTGTTTGACT GCAGCAAAGATTGAGGTATTGTACGATCAGACTACAAGTACACGCCAGCT AGCCAGCCATGCTTGCCAGTTTTCAACAAAAATAATGAATGCATCCTCGT AATTCACTTGTAAATGCAACTTCGTGCTTCAATGCAATTATTAGAAACCT CCAGGAATAGCTCCGAGGTACAACACTTGCTGATACGAAATGGTGATGAG GAAACACACCTCTGCCTGCTGTAGCTTGTCATTGCCGCTGTGTCTTCTGC CTGACTTGTTAGTGATTCAGAATGCTCTGGCGCGTAACCAGTCCATGAAT CAATGTGAAATGAATGGCCATTCACGCAGCTGCCCTGTCAGAGGCGCTGC ACACCTGTTGGATGCCCTGAAACGCATTTCGAACTCTCCCAACATATCAT ATGCGTTGCTTGCTTGTGCGCTTTTTGAACTCTCAGGATGGACACGTCAA GCTGACGGACATGGGCGGTGTAGCCGAGTTTGCAAAAGGCACATGCCTTG ACCCCATGGATTCATGCTCAGGGTCAAGCCCATACATGATGGAGATTGGA GGGCAGCGCAAAGGCAACACGGAGGCACGAAAGCTGTCACAATCTCACCG GCGGCGAAGTATCATGGGCACACATGGCTACATGGCGCCTGAAATGGTGA TCCTTCTGAGTCAGCCAAGGGCTGTGCGCAAGGTACACACACCCTTCGCG CTGCTTAAGTCAGTAGCACAGCAGAAACAGCACACATCTGCACAGACTGC ACTACTGATTGGCTTGTTGCTGGCAGGTGGATGCAAGTGCGCCACGGCCA CTACACGCTGAGCATGTCAAGTGTAAACCAATCAACAAGCGGGAGTATTC ACATCGCTCAAAGGCAATTGTGATCACTGCAAGTGCAAGCCCACTCTGAG ACGTGCTTGAATGCTTCTGTGACAGGGATACACCAAGGCGGTGGACTTCT GGTCATTAGGAGTGACCATGTACAAGCTGCTCACGGGAGTGCGACCCTTT GAGAACAAGCGGTTCCGTGCATTTATGGAGGACACACAGGCAAAAATGGG GGAAAATTTCGACAAATACGAGGTATGCATGGATGTGCATTCCTGAGATG ATGGCTTCATTTGGATGTTCTTAGTGAATGTAATCAGAATTTTACCGGCA GACTTCTGCAGCATATGAGGCAATGCAGTGACTGGCTCCAGCATTGATGC ATCACTCACATAGCATTGAAGTGCCAAACAATGGGTAATGTGCTAGTGCA TGCTGACTTCAAACTCAAGGCATTGTCACTTCCATCATTGTGCACATCGT ACAACGCCAGCTCACTATTGCAATGATGTATCTTCGCACACCGCTGCAGG AGATCCTCACGGAGGTGCGCTTCCCGCCCTACATGAGTGCCGAGGCGAAG GACCTGGTCATTCGCCTCCTGGATGGCAATGAACATAGGCGCCTAGGAGC CTCGCCAGAGCTGCTCGCTGAGCTCAAGGCACACCCTTTCTTCAATGGCA TAGACTGGGTGAGGCTCAGTGTGCGGCATATGATTCCTCCCTACGTTCCC GACGCCAAGCCCCTGGAACAAACGCCACAGTACGCATCGTTTGATGCACT GATGGAGGCTTACCGCACACAGGACGAGGCTGATAGGAGTGGGGGCACGC CCATGTGTGATTGGACGCAGAAGCCATCGCCCGCAGACCAACGCTTCTTC CAGTCATGGGACTTCATATCTATGCAGACGCTCAAGATCGAGATGGGCAT TGCAAATGAGATGGTGTCTCATGACACAAACTTCAAGGTCCGGCAGCTCA TGGGCGATCCAGGGGACTCCTCCAAAGCGAGTCCTCGTGGCGTGTTCATA TTGCGACATGCCAACAGCATGAGTGCGAGCCGGGGCAATAAGCTGGGCAA GAGCATGTAG
back to top

Coding sequence (CDS) from alignment at Contig_145:358692..364551+

>mRNA_15230 ID=mRNA_15230|Name=jgi.p|Trimin1|177062|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1800bp|location=Sequence derived from alignment at Contig_145:358692..364551+ (Tribonema minus UTEX_B_3156 )
ATGGTTGAGAAGTTTGAGAAGGATGGCACGCTCCCCGCAGGAGTTGACAG
TGATCCAGAACACATGGAACTGCGGACTATACTGGAGGACCCAGTGGGGC
AGAAGTACATCGGTGCTTTTGCTAAGAAGACACTCACTCATGAGAGCTTC
TTTGCCTGGACTGAGATACAAGAGTACCGCAGCATACCCACTGCTGACTA
TCAGAGGGGCATGGCGATGCATATATACCAAAAGTACATCAAGGAGGGGG
CCATATTACAGCTCGGCTGTGTCAAGCCTGCGGACCGTCAATGCATCAAA
GCAGTGCTCGACCAGTCTAAGTACGATGCCTCTGTCACCAACAACCAGCT
CTACGACAAGGTGCAGCAGGCCGTGTTCATTGAGATGTACCACAACACCT
TCCAACGATTCAAGGTGTCTGATGAGTACAGCGAGATGCGCAAGATGCTG
CGCGAGACATACAACCGCGTGTGTCTCAGTGACTTCGACTACATTGCGCA
GATAGGGGAGGGGGGCTTTGGCAGGGTGGTACATGTACGCAAGAAGAGCA
CCATGGCGCATCTGGCCATGAAGATACAGCTCAAGACGGCGTTGTTGGAG
ACATTCAGCGATGACCCCAACCGGATAGACAACGAGCGGCGAGTTCTGGC
GGCCACGTACCACCCCTTCATTGTGGGCATGAATTACGCTTTCCAGACGG
AAACGCTTGCCATCATGGTGCTGGACCTGGTGACATGCGGGGACCTGCAG
GAGGCCATCAACCAAGCTCCAAACAAGCGTCTCAATGAAGTGCGCGTCCA
GTTCTACGTGGCAGAAATCATTCTTGCGCTGAGCCACCTGCATGAGCTAG
GGCTTATGTTCAGGGACTTGAAACCGTGCAACGTTCTGCTGGGGCAGGAT
GGACACGTCAAGCTGACGGACATGGGCGGTGTAGCCGAGTTTGCAAAAGG
CACATGCCTTGACCCCATGGATTCATGCTCAGGGTCAAGCCCATACATGA
TGGAGATTGGAGGGCAGCGCAAAGGCAACACGGAGGCACGAAAGCTGTCA
CAATCTCACCGGCGGCGAAGTATCATGGGCACACATGGCTACATGGCGCC
TGAAATGGTGATCCTTCTGAGTCAGCCAAGGGCTGTGCGCAAGGGATACA
CCAAGGCGGTGGACTTCTGGTCATTAGGAGTGACCATGTACAAGCTGCTC
ACGGGAGTGCGACCCTTTGAGAACAAGCGGTTCCTGAATGAGATCCTCAC
GGAGGTGCGCTTCCCGCCCTACATGAGTGCCGAGGCGAAGGACCTGGTCA
TTCGCCTCCTGGATGGCAATGAACATAGGCGCCTAGGAGCCTCGCCAGAG
CTGCTCGCTGAGCTCAAGGCACACCCTTTCTTCAATGGCATAGACTGGGT
GAGGCTCAGTGTGCGGCATATGATTCCTCCCTACGTTCCCGACGCCAAGC
CCCTGGAACAAACGCCACAGTACGCATCGTTTGATGCACTGATGGAGGCT
TACCGCACACAGGACGAGGCTGATAGGAGTGGGGGCACGCCCATGTGTGA
TTGGACGCAGAAGCCATCGCCCGCAGACCAACGCTTCTTCCAGTCATGGG
ACTTCATATCTATGCAGACGCTCAAGATCGAGATGGGCATTGCAAATGAG
ATGGTGTCTCATGACACAAACTTCAAGGTCCGGCAGCTCATGGGCGATCC
AGGGGACTCCTCCAAAGCGAGTCCTCGTGGCGTGTTCATATTGCGACATG
CCAACAGCATGAGTGCGAGCCGGGGCAATAAGCTGGGCAAGAGCATGTAG
back to top