mRNA_15147 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|177397 vs. uniprot
Match: A0A836CKP0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKP0_9STRA) HSP 1 Score: 441 bits (1135), Expect = 3.140e-157 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 1
Query: 1 MDLVTHVKNSILSAYINKSKLTDDVLNMQGMSGSKTRHLYNNMCSLPGARYLEVGTFKGSSFVSAMYENDQCTGFCVDNWSEFGGRDDFFRNTERFIPEASMIVHDKNCWDISKKDVPLPINIFLYDGAHNYKDQKRAITHFKPLFDRRVIIMIDDWACDWVHVKRGTMDGIEEAGLKIVFSHEIGLVNTETYHCPGNTFWGGVV 615
MDLVTHVKNSILSAYINKSKLTDDVLNMQGMSGSKTRHLYNNMCSLPGARYLEVGTFKGSSFVSAMYENDQCTGFCVDNWSEFGGRDDFFRNTERFIPEASMIVHDKNCWDISKKDVPLPINIFLYDGAHNYKDQKRAITHFKPLFDRRVIIMIDDWACDWVHVKRGTMDGIEEAGLKIVFSHEIGLVNTETYHCPGNTFWGGVV
Sbjct: 1 MDLVTHVKNSILSAYINKSKLTDDVLNMQGMSGSKTRHLYNNMCSLPGARYLEVGTFKGSSFVSAMYENDQCTGFCVDNWSEFGGRDDFFRNTERFIPEASMIVHDKNCWDISKKDVPLPINIFLYDGAHNYKDQKRAITHFKPLFDRRVIIMIDDWACDWVHVKRGTMDGIEEAGLKIVFSHEIGLVNTETYHCPGNTFWGGVV 205
BLAST of jgi.p|Trimin1|177397 vs. uniprot
Match: A0A836CI74_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI74_9STRA) HSP 1 Score: 386 bits (991), Expect = 2.960e-135 Identity = 170/202 (84.16%), Postives = 192/202 (95.05%), Query Frame = 1
Query: 7 LVTHVKNSILSAYINKSKLTDDVLNMQGMSGSKTRHLYNNMCSLPGARYLEVGTFKGSSFVSAMYENDQCTGFCVDNWSEFGGRDDFFRNTERFIPEASMIVHDKNCWDISKKDVPLPINIFLYDGAHNYKDQKRAITHFKPLFDRRVIIMIDDWACDWVHVKRGTMDGIEEAGLKIVFSHEIGLVNTETYHCPGNTFWGGV 612
L++HVKNSIL+AYINKSKLT+DVL+M GMSGSKTRHLYNNMCSLPGARYLE+GTFKGSSFVSAM+ ND CTGFCVDNWSEFGGRDDFFRN ER++P ASMIVHDK+CW ISKKDVP+PIN+FLYDGAHNY+DQKRAIT+FK FD+RV+IM+DDWACDWVHVKRGTMDGI+EAGLK+++SHEIGLVNTE+YH PGNTFW GV
Sbjct: 1 LISHVKNSILAAYINKSKLTEDVLSMPGMSGSKTRHLYNNMCSLPGARYLEIGTFKGSSFVSAMFGNDGCTGFCVDNWSEFGGRDDFFRNAERYVPNASMIVHDKDCWSISKKDVPVPINVFLYDGAHNYEDQKRAITYFKQFFDKRVVIMVDDWACDWVHVKRGTMDGIKEAGLKVLYSHEIGLVNTESYHSPGNTFWNGV 202
BLAST of jgi.p|Trimin1|177397 vs. uniprot
Match: A0A6C0KYI9_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0KYI9_9ZZZZ) HSP 1 Score: 217 bits (552), Expect = 2.960e-68 Identity = 101/204 (49.51%), Postives = 142/204 (69.61%), Query Frame = 1
Query: 7 LVTHVKNSILSAYINKSKLTDDVLNMQGMSGSKTRHLYNNMCSLPGARYLEVGTFKGSSFVSAMYENDQCTGFCVDNWSEFGG-RDDFFRNTERFIP--EASMIVHDKNCWDISKKDVPLPINIFLYDGAHNYKDQKRAITHFKPLFDRRVIIMIDDWACDWVHVKRGTMDGIEEAGLKIVFSHEIGLVNTETYHCPGNTFWGG 609
L+ H K +I +AY N S L + VL M+GMSG KTRHLYNN+C++ YLE+GT+KGSSF+S+MY N G+C+DNWS+F G +D F N +++P E ++ + +K+ W I++ D+ PI+I+LYDGAH Y DQK+AIT++ F + +IIM+DDW CD V VKRGT+DGI+E LK+ F HE LV + + + FW G
Sbjct: 6 LINHTKTAIKNAYDNFSSLPESVLEMEGMSGKKTRHLYNNICNIDNKVYLEIGTWKGSSFISSMYSNRGVYGYCIDNWSQFNGPKDIFLNNIAKYLPAAEQNIKIINKDSWLITENDITKPIDIYLYDGAHTYDDQKKAITYYHNYFSKYIIIMVDDWYCDHVDVKRGTLDGIKEMKLKVHFMHETPLVQPDARNGT-DPFWNG 208
BLAST of jgi.p|Trimin1|177397 vs. uniprot
Match: A0A2E7G9Q1_9PROT (Uncharacterized protein n=1 Tax=Bdellovibrionaceae bacterium TaxID=2026715 RepID=A0A2E7G9Q1_9PROT) HSP 1 Score: 159 bits (401), Expect = 1.680e-45 Identity = 81/202 (40.10%), Postives = 120/202 (59.41%), Query Frame = 1
Query: 7 LVTHVKNSILSAYINKSKLTDDVLNMQGMSGSKTRHLYNNMCSLPGARYLEVGTFKGSSFVSAMYENDQCTGFCVDNWSEFGG-RDDFFRNTERFIPEASMIVHDKNCWDISKKDVPLPINIFLYDGAHNYKDQKRAITHFKPLFDRRVIIMIDDWACDWVHVKRGTMDGIEEAGLKIVFSHEIGLVNTETYHCPG--NTFW 603
L+ HV+ + KSK+T ++LNM GM+G KTRH YNN+CS+ ARYLE+GT+KGSS SAM N++ T +DNWSEFGG ++DF N +F E + +KNCWDI + +NI++YDG H +A+ H+ P D I ++DDW +W V+ GT I++ +I++ I + ++ P N+ W
Sbjct: 4 LIKHVEKCLNLTDEYKSKVTPEILNMDGMTGKKTRHFYNNICSIKEARYLEIGTWKGSSLCSAMC-NNKMTCVAIDNWSEFGGPKNDFLENFNKFKGENNATFIEKNCWDIDVSKLG-KLNIYMYDGNHTETSHFQALNHYLPCLDDEFIYLVDDW--NWQQVRNGTNQSIKDNKCEILYHKVIRTTDNNSHGNPSGKNSDW 201
BLAST of jgi.p|Trimin1|177397 vs. uniprot
Match: A0A6C0KPM5_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0KPM5_9ZZZZ) HSP 1 Score: 157 bits (396), Expect = 9.550e-45 Identity = 80/204 (39.22%), Postives = 126/204 (61.76%), Query Frame = 1
Query: 13 THVKNSILSAYINKSKLTDDVLNMQGMSGSKTRHLYNNMCSLPGARYLEVGTFKGSSFVSAMYENDQCTGFCVDNWSEFGG-RDDFFRNTERFIPEASMIVHDKNCWDISKKDVPLPINIFLYDGAHNYKDQKRAITHFKPLFDRRVIIMIDDWACDWVHVKRGTMDGIEEAGLKIVFSHEIGLV--NTETYHCPG-NTFWGGV 612
T V+ + L+A N SK+T+D++NM+GMSG+KTRH YNN+ + ARYLE+GT+KGSS SAM+ N + C+DNWSEFGG + +F N E+F E + +C+ + +P NI++YDG H ++ A+ H+ D I ++DDW +W V+ GT++ I++ LK+++ E+ L N+ T +T+W G+
Sbjct: 6 TIVETAFLNAENNISKITNDIINMEGMSGTKTRHFYNNLLNTENARYLEIGTWKGSSVCSAMFGN-KAKVICIDNWSEFGGPKSEFLVNFEKFKGENEATFIENDCYKVDVSVLP-KFNIYMYDGNHTNENHYNALLHYYNCLDDIFIFIVDDW--NWKDVRDGTINSIQKLNLKVLYEKEVRLTWDNSHTSQPQAKDTWWNGI 205
BLAST of jgi.p|Trimin1|177397 vs. uniprot
Match: A0A437MRZ9_9SPHI (Uncharacterized protein n=1 Tax=Mucilaginibacter limnophilus TaxID=1932778 RepID=A0A437MRZ9_9SPHI) HSP 1 Score: 156 bits (395), Expect = 1.810e-44 Identity = 78/207 (37.68%), Postives = 122/207 (58.94%), Query Frame = 1
Query: 10 VTHVKNSILSAYINKSKLTDDVLNMQGMSGSKTRHLYNNMCSLPGARYLEVGTFKGSSFVSAMYENDQCTGFCVDNWSEFGG---RDDFFRNTERFIPEASMIVHDKNCWDISKKDVPLPINIFLYDGAHNYKDQKRAITHFKPLFDRRVIIMIDDWACDWVHVKRGTMDGIEEAGLKIVFSHEIGLVNTETYHCPGNT---FWGGV 612
+ H++ S +A + KSK+T+D+L M GM+G KTRH YNN+ + +RYLEVGT+ GSS +AMY N C+DNWSEFGG +D F + + E + +C++++ D NI+LYDG H Y++ +A+ F D I++IDDW +W V+ GT D I+++GL++++ EI L + + P +W G+
Sbjct: 9 IKHLEQSFANAEVGKSKITEDILEMYGMTGHKTRHFYNNLLDIDDSRYLEVGTWAGSSVCAAMYGNRSDV-VCIDNWSEFGGEEVKDIFLEYFDEYKGENKATFIEDDCFNVNL-DSQKKFNIYLYDGGHAYEEHYKAVFQFLDHLDDLFILIIDDW--NWAKVRNGTRDAIKDSGLQVLWEREIILTKNDEHTPPDEAKVNWWNGI 211
BLAST of jgi.p|Trimin1|177397 vs. uniprot
Match: A0A6C0LE12_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LE12_9ZZZZ) HSP 1 Score: 155 bits (392), Expect = 3.940e-44 Identity = 78/190 (41.05%), Postives = 116/190 (61.05%), Query Frame = 1
Query: 13 THVKNSILSAYINKSKLTDDVLNMQGMSGSKTRHLYNNMCSLPGARYLEVGTFKGSSFVSAMYENDQCTGFCVDNWSEFGG-RDDFFRNTERFIPEASMIVHDKNCWDISKKDVPLPINIFLYDGAHNYKDQKRAITHFKPLFDRRVIIMIDDWACDWVHVKRGTMDGIEEAGLKIVFSHEIGLVNTETY 579
T V+ + +A N SK+TDD++NM GMSG+KTRH YNN+ + ARYLE+GT+KGSS SAMY N + C+DNWSEFGG + +F N E+F E + +C+ + +P NI++YDG H + A+ H+ D I ++DDW +W V+ GT + I++ LK+++ EI N +T+
Sbjct: 6 TVVETAFQNAENNISKITDDIINMDGMSGTKTRHFYNNLLNTEDARYLEIGTWKGSSVCSAMYGN-KAKVICIDNWSEFGGPKCEFLVNFEKFKGENEATFIENDCYKVDVSTLP-KFNIYMYDGNHTSESHYTALLHYYNCLDDVFIFIVDDW--NWKDVRDGTNNSIQKLNLKVLYEKEIRTTNNDTH 191
BLAST of jgi.p|Trimin1|177397 vs. uniprot
Match: A0A6C0DDL7_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DDL7_9ZZZZ) HSP 1 Score: 155 bits (391), Expect = 6.830e-44 Identity = 75/184 (40.76%), Postives = 117/184 (63.59%), Query Frame = 1
Query: 7 LVTHVKNSILSAYINKSKLTDDVLNMQGMSGSKTRHLYNNMCSLPGARYLEVGTFKGSSFVSAMYENDQCTGFCVDNWSEFGG-RDDFFRNTERFIPEASMIVHDKNCWDISKKDVPLPINIFLYDGAHNYKDQKRAITHFKPLFDRRVIIMIDDWACDWVHVKRGTMDGIEEAGLKIVFSHEI 555
L HV+ + A +SK+T++++NM+GMSG KTRH YNN+ + ARYLE+GT+KGSS SAM N C+DNWS+FGG + +F +N +++ + I +K+C+ + + +P NI++YDG H+ ++ RA+THF D I ++DDW +W HV+ GT++ LK ++S EI
Sbjct: 4 LQEHVERAFEDAEKGRSKITEEIINMEGMSGIKTRHFYNNLLNRDDARYLEIGTWKGSSVCSAMCGNHAKV-VCIDNWSQFGGPKGEFIQNFKKYKGDNYAIFIEKDCYQVDVESLP-SFNIYMYDGEHSKENHGRALTHFYDCLDDTFIFIVDDW--NWRHVREGTLESFGHLKLKTLYSKEI 183
BLAST of jgi.p|Trimin1|177397 vs. uniprot
Match: A0A1D2R7C4_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Altiarchaeales archaeon WOR_SM1_86-2 TaxID=1849364 RepID=A0A1D2R7C4_9ARCH) HSP 1 Score: 153 bits (387), Expect = 1.320e-43 Identity = 76/196 (38.78%), Postives = 123/196 (62.76%), Query Frame = 1
Query: 7 LVTHVKNSILSAYINKSKLTDDVLNMQGMSGSKTRHLYNNMCSLPGARYLEVGTFKGSSFVSAMYENDQCTGFCVDNWSEFGG-RDDFFRNTERFIPEASMIVHDKNCWDISKKDVPLPINIFLYDGAHNYKDQKRAITHFKPLFDRRVIIMIDDWACDWVHVKRGTMDGIEEAGLKIVFSHEIGLVNTETYHCPG 591
+V H+KNSI A + KSKL +++ ++GM K RHL NN+ +PGARYLEVG ++G++F+SA+Y+ND +DNWSEFG R+DF ++I E +I D C+++ +D INI+ YDG H+ K Q RA+ HF ++ +I ++DD+ +W V+ GT +++ KI++ +G ++T + + G
Sbjct: 1 MVEHIKNSIRRADLLKSKLIPEIIELEGMCQGKLRHLLNNIVDIPGARYLEVGVYRGATFISALYKNDYDKAIAIDNWSEFGDYREDFTEKCNKYIGEYELINDD--CFNVKLRD---KINIYFYDGHHSTKAQSRALAHFYDSLEKEIIFIVDDY--NWPPVRTGTDQAVKD--WKILYETNLGDLHTTSDYSHG 187
BLAST of jgi.p|Trimin1|177397 vs. uniprot
Match: A0A6C0CT11_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CT11_9ZZZZ) HSP 1 Score: 149 bits (377), Expect = 6.950e-42 Identity = 74/190 (38.95%), Postives = 116/190 (61.05%), Query Frame = 1
Query: 19 VKNSILSAYINKSKLTDDVLNMQGMSGSKTRHLYNNMCSLPGARYLEVGTFKGSSFVSAMYENDQCTGFCVDNWSEFGG-RDDFFRNTERFIPEASMIVHDKNCWDISKKDVPLPINIFLYDGAHNYKDQKRAITHFKPLFDRRVIIMIDDWACDWVHVKRGTMDGIEEAGLKIVFSHEIGLVNTETYHC 585
V+ + +A N SK+T+D++ MQGMSG+KTRH YNN+ ARYLE+GT+KGSS SAM N + C+DNWS+FGG + +F N E+F E + +C+ + +P NIF+YDG H+ + +A+ H+ D I ++DDW +W V+ GT++ I++ LK+++ E+ L ++ C
Sbjct: 8 VEKAFQNAENNISKITNDIITMQGMSGTKTRHFYNNLLDTEDARYLEIGTWKGSSVCSAMCGN-KAKIICIDNWSQFGGPKSEFLVNFEKFKGENEATFIEDDCYKVDVSTLP-KFNIFMYDGEHSNESHYKALLHYYSCLDDVFIYIVDDW--NWKDVRDGTINSIQKLNLKVLYEKEVRLTWDNSHTC 193 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|177397 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_15147 ID=mRNA_15147|Name=jgi.p|Trimin1|177397|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=618bp|location=Sequence derived from alignment at Contig_151:70328..70945- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGACCTTGTGACGCACGTCAAGAACTCCATTCTGTCAGCGTACATCAAback to top protein sequence of jgi.p|Trimin1|177397 >Trimin1|177397|e_gw1.151.15.1 ID=Trimin1|177397|e_gw1.151.15.1|Name=jgi.p|Trimin1|177397|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=206bp MDLVTHVKNSILSAYINKSKLTDDVLNMQGMSGSKTRHLYNNMCSLPGARback to top mRNA from alignment at Contig_151:70328..70945- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_15147 ID=mRNA_15147|Name=jgi.p|Trimin1|177397|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=618bp|location=Sequence derived from alignment at Contig_151:70328..70945- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_151:70328..70945- >mRNA_15147 ID=mRNA_15147|Name=jgi.p|Trimin1|177397|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=618bp|location=Sequence derived from alignment at Contig_151:70328..70945- (Tribonema minus UTEX_B_3156 )back to top |