mRNA_15139 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|155436 vs. uniprot
Match: A0A835Z768_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z768_9STRA) HSP 1 Score: 388 bits (997), Expect = 1.040e-135 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 1 Query: 1 WEQKAILFPSDLATQSYFGYSVAVSGSYTIVGASNGRGTAYIFERNAGTGAWEQKATWTNPDATXXXXXXXXXXXXXXXXXXXRGKMVNAIVSAGGIYVFERITGTWIQTAIIDNPDPVASDYFGSSVSVNGVFAVVGCYNKDPASKVNAGSSYLYKRNSSTGQREQKTQWTASDGLAGDQLGISVGISGTVAIMMAGAYNKAVMGVAGAGGVYVYDVTD 660 WEQKAILFPSDLATQSYFGYSVAVSGSYTIVGASNGRGTAYIFERNAGTGAWEQKATWTNPDATXXXXXXXXXXXXXXXXXXXRGKMVNAIVSAGGIYVFERITGTWIQTAIIDNPDPVASDYFGSSVSVNGVFAVVGCYNKDPASKVNAGSSYLYKRNSSTGQREQKTQWTASDGLAGDQLGISVGISGTVAIMMAGAYNKAVMGVAGAGGVYVYDVTD Sbjct: 1 WEQKAILFPSDLATQSYFGYSVAVSGSYTIVGASNGRGTAYIFERNAGTGAWEQKATWTNPDATXXXXXXXXXXXXXXXXXXXRGKMVNAIVSAGGIYVFERITGTWIQTAIIDNPDPVASDYFGSSVSVNGVFAVVGCYNKDPASKVNAGSSYLYKRNSSTGQREQKTQWTASDGLAGDQLGISVGISGTVAIMMAGAYNKAVMGVAGAGGVYVYDVTD 220
BLAST of jgi.p|Trimin1|155436 vs. uniprot
Match: A0A835Z2L7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2L7_9STRA) HSP 1 Score: 243 bits (620), Expect = 1.250e-71 Identity = 126/218 (57.80%), Postives = 158/218 (72.48%), Query Frame = 1 Query: 1 WEQKAILFPSDLATQSYFGYSVAVSGSYTIVGA--SNGRGTAYIFERNAGTGAWEQKATWTNPDATXXXXXXXXXXXXXXXXXXXRGKMVNAIVSAGGIYVFERITGTWIQTAIIDNPDPVASDYFGSSVSVNGVFAVVGCYNKDPASKVNAGSSYLYKRNSSTGQREQKTQWTASDGLAGDQLGISVGISGTVAIMMAGAYNKAVMGVAGAGGVYVY 648 WEQK++LFPSDL T S FG+SV+VSG+Y IVGA G G AYIFERN+ TGAWEQKA T PD+T + K VN++ +AGG+Y++ER+ TW Q AI++NPDP A+D FG SV+V+GV+AV+GC NKDPASK NAG++YLYKRNS+TG E K +WTASDGLA DQ+G SVG+SGT + + AYNK V G++ AGG YVY Sbjct: 680 WEQKSVLFPSDLPTASKFGWSVSVSGTYAIVGAYLKTGGGGAYIFERNSSTGAWEQKAILTCPDSTIAQFGYSVSIDGTYAVVSAQNKSVNSLATAGGVYMYERVASTWTQKAILENPDPAATDQFGYSVAVSGVYAVIGCVNKDPASKGNAGATYLYKRNSTTGVWESKMEWTASDGLASDQMGWSVGLSGTHVV--SSAYNKTVTGLSTAGGAYVY 895
BLAST of jgi.p|Trimin1|155436 vs. uniprot
Match: A0A835Z0X2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0X2_9STRA) HSP 1 Score: 231 bits (588), Expect = 3.950e-67 Identity = 123/221 (55.66%), Postives = 153/221 (69.23%), Query Frame = 1 Query: 1 WEQKAILFPSDLATQSYFGYSVAVSGSYTIVGASN--GRGTAYIFERNAGTGAWEQKATWTNPDATXXXXXXXXXXXXXXXXXXXRGKMVNAIVSAGGIYVFERITGTWIQTAIIDNPDPVASDYFGSSVSVNGVFAVVGCYNKDPASKVNAGSSYLYKRNSSTGQREQKTQWTASDGLAGDQLGISVGISGTVAIMMAGAYNKAVMGVAGAGGVYVYDVT 657 WEQKA L+PSD SY+G SV++SG+Y IVGA G G AYI ERNAGT AWE+KA T PDAT K V+++ SAGG YV+ERI+GTW TA I+NPDP ASD FG++V+VNG++AV+GC KDPA K AGS+YLYKRNS+TG E K +WTASDG+A D G SVG+SGT +++GAY K V GV+ AGG YVY+++ Sbjct: 233 WEQKASLYPSDYLAGSYYGSSVSISGTYAIVGAYQKAGGGGAYILERNAGTNAWEEKAILTCPDATTAQFGSSVAIDNSYAIVGGPAKSVSSLSSAGGAYVYERISGTWTLTATINNPDPAASDSFGTAVTVNGIYAVIGCNGKDPAGKSGAGSTYLYKRNSTTGVWENKIEWTASDGVASDSFGTSVGVSGTH--VLSGAYRKTVNGVSPAGGAYVYELS 451
BLAST of jgi.p|Trimin1|155436 vs. uniprot
Match: A0A835YZ62_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ62_9STRA) HSP 1 Score: 213 bits (542), Expect = 1.800e-60 Identity = 111/196 (56.63%), Postives = 134/196 (68.37%), Query Frame = 1 Query: 1 WEQKAILFPSDLATQSYFGYSVAVSGSYTIVGA--SNGRGTAYIFERNAGTGAWEQKATWTNPDATXXXXXXXXXXXXXXXXXXXRGKMVNAIVSAGGIYVFERITGTWIQTAIIDNPDPVASDYFGSSVSVNGVFAVVGCYNKDPASKVNAGSSYLYKRNSSTGQREQKTQWTASDGLAGDQLGISVGISGTVAI 582 WEQ+++LFPSDL S FG SV++SG+Y IVGA +G G AYIFERN +G WE+KA T D+T K VN++ AGG YVFERI G W QTAI+DNPDP ASD FG SVS +G++AV+GC KDP+SK +AGS YLYKRN++TG E K QW ASDGLAGDQLG SVG+ GT A+ Sbjct: 729 WEQRSVLFPSDLPAGSRFGASVSISGTYAIVGAYTKSGGGGAYIFERNPSSGIWEEKAILTCSDSTVARFGFGVSVDGTYAIVSAYYKTVNSLSQAGGAYVFERIAGAWTQTAILDNPDPAASDQFGFSVSASGIYAVIGCNLKDPSSKNSAGSMYLYKRNATTGGWENKVQWAASDGLAGDQLGFSVGVYGTTAV 924
BLAST of jgi.p|Trimin1|155436 vs. uniprot
Match: A0A835YYF1_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYF1_9STRA) HSP 1 Score: 199 bits (507), Expect = 6.930e-59 Identity = 112/221 (50.68%), Postives = 142/221 (64.25%), Query Frame = 1 Query: 1 WEQKAILFPSDLATQSYFGYSVAVSGSYTIVGASN---GRGTAYIFERNAGTGAWEQKATWTNPD-ATXXXXXXXXXXXXXXXXXXXRGKMVNAIVSAGGIYVFERITGTWIQTAIIDNPDPVASDYFGSSVSVNGVFAVVGCYNKDPASKVNAGSSYLYKRNSSTGQREQKTQWTASDGLAGDQLGISVGISGTVAIMMAGAYNKAVMGVAGAGGVYVYD 651 WEQKA LFPSD+ T +YFG + +SG+Y IVGA N G AYIFERN+ +GAWE+KA D A GK V A+ + GG YVFER++GTW Q A++DNPDP ASDYFG SVSV+GV+AVVGCY DP+SK AGS+YL+KR+ +TG +WTA+DGLA D +G SV I+GT + +GA K GV GG Y+++ Sbjct: 190 WEQKATLFPSDVPTGAYFGAGICISGTYAIVGAYNKNTAAGGAYIFERNSTSGAWEEKAILAASDPAANMKFGKAVSIDGNYAVVAAEGKTVTALSNVGGAYVFERVSGTWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGSTYLFKRSPTTGLWPFVKEWTANDGLASDNMGGSVSIAGTHVV--SGASFKTSAGVTIMGGAYMFE 408
BLAST of jgi.p|Trimin1|155436 vs. uniprot
Match: A0A836CBN5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN5_9STRA) HSP 1 Score: 184 bits (468), Expect = 9.500e-53 Identity = 103/219 (47.03%), Postives = 140/219 (63.93%), Query Frame = 1 Query: 1 WEQKAILFPSDLATQSYFGYSVAVSGSYTIVGASN--GRGTAYIFERNAGTGAWEQKATWTNPDATXXXXXXXXXXXXXXXXXXXRGKMVNAIVSAGGIYVFERITGTWIQTAIIDNPDPVASDYFGSSVSVNGVFAVVGCYNKDPASKVNAGSSYLYKRNSSTGQREQKTQWTASDGLAGDQLGISVGISGTVAIMMAGAYNKAVMGVAGAGGVYVYD 651 W Q + LFPSDL T + FGYSV +SG+Y IVGA N G G AY+FERN+ + WEQKA D+T K V+++ SAGG YV ERI+GTW QTA +DNPDPVASD FG +V+V GV+AV+GC KDP K+ G++Y+++R++ TG Q T+ TA+DGL D G S +SGT A++ GA + ++G +G+G VY ++ Sbjct: 117 WGQASSLFPSDLPTGARFGYSVCISGTYAIVGAMNKSGGGGAYMFERNSTSSTWEQKAILACSDSTVASFGIAVSISGSYAVVGANTKSVSSVSSAGGAYVLERISGTWTQTATLDNPDPVASDMFGQAVNVYGVYAVIGCSLKDPF-KLGGGAAYVFERDAGTGAWVQNTKLTAADGLPLDFFGYSASVSGTYAVV--GAIGRYLLGQSGSGAVYAFE 332
BLAST of jgi.p|Trimin1|155436 vs. uniprot
Match: A0A835Z582_9STRA (FG-GAP repeat-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z582_9STRA) HSP 1 Score: 186 bits (472), Expect = 1.270e-50 Identity = 96/171 (56.14%), Postives = 122/171 (71.35%), Query Frame = 1 Query: 1 WEQKAILFPSDLATQSYFGYSVAVSGSYTIVGA--SNGRGTAYIFERNAGTGAWEQKATWTNPDATXXXXXXXXXXXXXXXXXXXRGKMVNAIVSAGGIYVFERITGTWIQTAIIDNPDPVASDYFGSSVSVNGVFAVVGCYNKDPASKVNAGSSYLYKRNSSTGQREQKT 507 WEQKA+LFPSDLAT S+FG +V+VSG+Y +VGA G G AY++ERN+GTGAWE+KA D+T K V+++ SAGG Y+FER++GTW QTAI+DNPDP ASD+FG SV+VNG++AV+GC K PASK AG++YLYKRNS+TG E KT Sbjct: 227 WEQKAVLFPSDLATGSFFG-TVSVSGTYAMVGAYGKTGGGGAYVYERNSGTGAWEEKAILPCSDSTIASFGQSVAIDGTYAVVGAYTKTVSSLASAGGAYMFERLSGTWTQTAILDNPDPAASDFFGISVAVNGIYAVIGCNGKYPASKSMAGATYLYKRNSTTGAWENKT 396
BLAST of jgi.p|Trimin1|155436 vs. uniprot
Match: A0A836CAH9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAH9_9STRA) HSP 1 Score: 133 bits (335), Expect = 4.700e-34 Identity = 78/159 (49.06%), Postives = 97/159 (61.01%), Query Frame = 1 Query: 1 WEQKAILFPSDLATQSYFGYSVA---VSGSYTIVGA--SNGRGTAYIFERNAGTGAWEQKATWTNPDA-TXXXXXXXXXXXXXXXXXXXRGKMVNAIVSAGGIYVFERITGTWIQTAIIDNPDPVASDYFGSSVSVNGVFAVVGCYNKDPASKVNAGSS 459 WEQ+A+L PSDL + ++V+ VSG+Y IVGA G G AY++ERN+GTG WEQKA DA K A+ AGG YVFERI+GTW QTAI++NPDP ASD FG+SVS++GV AV+GC K P SK AGS+ Sbjct: 181 WEQQAVLSPSDLPIGTASEHNVSTGSVSGTYLIVGAYAKAGGGGAYMYERNSGTGVWEQKAILVASDAGASFSFGSGVSISGSYAVIGSSNKTAGALTLAGGAYVFERISGTWTQTAILNNPDPSASDRFGNSVSISGVNAVIGCNGKAPGSKSAAGSA 339
BLAST of jgi.p|Trimin1|155436 vs. uniprot
Match: A0A7J5TWN2_9BACT (Uncharacterized protein n=2 Tax=Rudanella paleaurantiibacter TaxID=2614655 RepID=A0A7J5TWN2_9BACT) HSP 1 Score: 110 bits (276), Expect = 9.200e-25 Identity = 77/203 (37.93%), Postives = 102/203 (50.25%), Query Frame = 1 Query: 1 WEQKAILFPSDLATQSYFGYSVAVSGSYTIVGA------SNG-RGTAYIFERNAGTGAWEQKATWTNPDATXXXXXXXXXXXXXXXXXXX-RGKMVNAIVSAGGIYVFERITGTWIQTAIIDNPDPVASDYFGSSVSVNGVFAVVGCYNKDPASKVNAGSSYLYKRNSSTGQREQKTQWTASDGLAGDQLGISVGISGTVAIM 585 W Q+A LF SD + S FGYSVA+SG Y IVGA SN +G AY+F RN T W Q+A D GK + + + G YVF R TW Q + D +DYFG SVSV+G +A+VG Y K S N G++Y++ R G Q+T+ TA G A D G++V I+G A++ Sbjct: 150 WTQQAQLFASDGESGSDFGYSVAISGDYAIVGAYGKTIGSNANQGAAYVFVRNGST--WTQQARLVASDGVPSDYFGYSVSISGDYALVGCTGKAIGSNTNQGAAYVFVRNGTTWTQQVRLLASDGADTDYFGISVSVSGDYAIVGAYRKTIGSNANQGAAYVFVRG---GTWTQQTRLTAIGGAANDNFGLNVSIAGDYAVV 347
BLAST of jgi.p|Trimin1|155436 vs. uniprot
Match: A0A845YMW7_9CYAN (Uncharacterized protein n=2 Tax=Symploca sp. SIO2G7 TaxID=2607798 RepID=A0A845YMW7_9CYAN) HSP 1 Score: 108 bits (269), Expect = 1.530e-23 Identity = 81/225 (36.00%), Postives = 110/225 (48.89%), Query Frame = 1 Query: 1 WEQKAILFPSDLATQSYFGYSVAVSGSYTIVGASN-------GRGTAYIFERNAGTGAWEQKATWTNPDATXXXXXXXXXXXXXXXXXXXRGKMVNA--IVSAGGIYVFERITGTWIQTAIIDNPDPVASDYFGSSVSVNGVFAVVGCYNKDPASKVNAGSSYLYKRNSSTGQREQKTQWTASDGLAGDQLGISVGISGTVAIMMAGAYNKAVMGVAGAGGVYVY 648 W+Q+ L P DL FG+SVA+SG IVGA G AYIF+ GT +QK P + +A IV AG Y+F+ GTW Q + D + SD+FG SV+++G A+VG + D K +AG++Y++K T Q++QK Q SD L GD GISV ISG VAI+ GA+ G AG Y++ Sbjct: 272 WQQQQKLQPPDLQRNYQFGHSVAISGEMAIVGACGVNAPGKPDAGAAYIFKLEGGTWKQQQKL---QPSDLQQGEQFGISVAISGEVAIVGARFADAPGIVDAGAAYIFKLEGGTWQQQQKLQPSDLLRSDHFGFSVAISGELAIVGAWQADAPGKPDAGAAYIFKWEGGTWQQQQKLQ--PSDLLRGDHFGISVAISGEVAIV--GAHCTDAPGKPDAGVAYIF 489 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|155436 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_15139 ID=mRNA_15139|Name=jgi.p|Trimin1|155436|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=660bp|location=Sequence derived from alignment at Contig_151:27020..27679+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. TGGGAGCAGAAGGCGATCCTATTCCCCAGTGATCTTGCGACGCAATCATAback to top protein sequence of jgi.p|Trimin1|155436 >Trimin1|155436|gw1.151.64.1 ID=Trimin1|155436|gw1.151.64.1|Name=jgi.p|Trimin1|155436|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=220bp WEQKAILFPSDLATQSYFGYSVAVSGSYTIVGASNGRGTAYIFERNAGTGback to top mRNA from alignment at Contig_151:27020..27679+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_15139 ID=mRNA_15139|Name=jgi.p|Trimin1|155436|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=660bp|location=Sequence derived from alignment at Contig_151:27020..27679+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_151:27020..27679+ >mRNA_15139 ID=mRNA_15139|Name=jgi.p|Trimin1|155436|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=660bp|location=Sequence derived from alignment at Contig_151:27020..27679+ (Tribonema minus UTEX_B_3156 )back to top |