mRNA_15131 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|149082
Unique NamemRNA_15131
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|149082 vs. uniprot
Match: A0A835ZHT7_9STRA (Brix domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHT7_9STRA)

HSP 1 Score: 709 bits (1831), Expect = 3.190e-257
Identity = 387/387 (100.00%), Postives = 387/387 (100.00%), Query Frame = 1
Query:    1 MPRKGGKRKKTHTHVVPPPEGTPGAEEDKVPRSFVFKLGKVAKQVNELVEEMRGVMEPNTARKLRERSSNSLKDFAVVSKPFGVTHLMAFGQTERSLTYRIARAPDGPTLTFKVNQYCLRRHVRALQRRPVETTQAFKTAPLVVLNNFGDASAPQELKLMKVTLQNMFPTINVAEVKLADCRRIVLFNYDKATKSVEMRHYAIRAMPTGINKAIKKVVQAKVPNLHNLDDIAEYVQGGGGAASDSEVDDEESKVVLPDRYGGRGNVKAQRSSIRLHELGPRVSMSLYKVERGLASGDVLYHSYITKTAEEVVALKNKFKEQDTLKRKRREEQEANVARKKAALEEKKALKAEKRAAKLAANGGEVGSADXXXXXXXXXXXXEDAMDE 1161
            MPRKGGKRKKTHTHVVPPPEGTPGAEEDKVPRSFVFKLGKVAKQVNELVEEMRGVMEPNTARKLRERSSNSLKDFAVVSKPFGVTHLMAFGQTERSLTYRIARAPDGPTLTFKVNQYCLRRHVRALQRRPVETTQAFKTAPLVVLNNFGDASAPQELKLMKVTLQNMFPTINVAEVKLADCRRIVLFNYDKATKSVEMRHYAIRAMPTGINKAIKKVVQAKVPNLHNLDDIAEYVQGGGGAASDSEVDDEESKVVLPDRYGGRGNVKAQRSSIRLHELGPRVSMSLYKVERGLASGDVLYHSYITKTAEEVVALKNKFKEQDTLKRKRREEQEANVARKKAALEEKKALKAEKRAAKLAANGGEVGSADXXXXXXXXXXXXEDAMDE
Sbjct:    1 MPRKGGKRKKTHTHVVPPPEGTPGAEEDKVPRSFVFKLGKVAKQVNELVEEMRGVMEPNTARKLRERSSNSLKDFAVVSKPFGVTHLMAFGQTERSLTYRIARAPDGPTLTFKVNQYCLRRHVRALQRRPVETTQAFKTAPLVVLNNFGDASAPQELKLMKVTLQNMFPTINVAEVKLADCRRIVLFNYDKATKSVEMRHYAIRAMPTGINKAIKKVVQAKVPNLHNLDDIAEYVQGGGGAASDSEVDDEESKVVLPDRYGGRGNVKAQRSSIRLHELGPRVSMSLYKVERGLASGDVLYHSYITKTAEEVVALKNKFKEQDTLKRKRREEQEANVARKKAALEEKKALKAEKRAAKLAANGGEVGSADXXXXXXXXXXXXEDAMDE 387          
BLAST of jgi.p|Trimin1|149082 vs. uniprot
Match: D7FV54_ECTSI (Brix domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV54_ECTSI)

HSP 1 Score: 455 bits (1171), Expect = 5.170e-156
Identity = 238/359 (66.30%), Postives = 285/359 (79.39%), Query Frame = 1
Query:    1 MPRKGGKRKKTHTHVVPPPEGTPGAEE----DKVPRSFVFKLGKVAKQVNELVEEMRGVMEPNTARKLRERSSNSLKDFAVVSKPFGVTHLMAFGQTERSLTYRIARAPDGPTLTFKVNQYCLRRHVRALQRRPVETTQAFKTAPLVVLNNFGDASAPQELKLMKVTLQNMFPTINVAEVKLADCRRIVLFNYDKATKSVEMRHYAIRAMPTGINKAIKKVVQAKVPNLHNLDDIAEYVQGG-GGAASDSEVDDEESKVVLPDRYGGRGNVKAQRSSIRLHELGPRVSMSLYKVERGLASGDVLYHSYITKTAEEVVALKNKFKEQDTLKRKRREEQEANVARKKAALEEKKALKAEKR 1062
            MP KGG+R+KT THVV PP G  GA E    +KVP+SFV K GKV   V++L EEMR VMEP+TARKLRER+ N++KD+  VS   GVTHL+ F QT++SL+ R+ R P GPTLTFKV Q+ L RHVRALQ+RPVE  QA+KT+PLVVLNNFGD  A  ++KLMKVTLQNMFP+INVA VKL DCRR+V+FN DK   +VEMRH+A+RA PTGI KAIKKVVQAKVP+LH L+DI+EYV GG GG  SDSEV+DEESK+ LPD Y GRGNVK+Q+SSIRL ELGPR+++ L KVERGL  G+VLYHSY+TKTAEE+ A + K +++D LKRKRR+EQ  NVARKK   EE  A KA +R
Sbjct:    1 MPTKGGRRRKTRTHVVGPPSGAVGAPESEMTEKVPKSFVLKKGKVHSNVSDLAEEMRRVMEPHTARKLRERAKNTVKDYVSVSSVLGVTHLLVFTQTDKSLSLRVCRTPTGPTLTFKVQQFSLMRHVRALQKRPVEVNQAYKTSPLVVLNNFGDKQASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTNGTVEMRHFAVRATPTGITKAIKKVVQAKVPDLHGLEDISEYVAGGMGGGISDSEVEDEESKITLPDDYVGRGNVKSQKSSIRLQELGPRLTLELMKVERGLCEGEVLYHSYVTKTAEEIKAQRAKVEKRDNLKRKRRDEQAENVARKKQEAEELAAAKAARR 359          
BLAST of jgi.p|Trimin1|149082 vs. uniprot
Match: A0A6H5KLG7_9PHAE (Brix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLG7_9PHAE)

HSP 1 Score: 407 bits (1046), Expect = 1.110e-136
Identity = 224/387 (57.88%), Postives = 270/387 (69.77%), Query Frame = 1
Query:    1 MPRKGGKRKKTHTHVVPPPEGTPGAEE----DKVPRSFVFKLGKVAKQVNELVEEMRGVMEPNTARKLRERSSNSLKDFAVVSKPFGVTHLMAFGQTERSLTYRIARAPDGPTLTFKVNQYCLRRHVRALQRRPVETTQAFKTAPLVVLNNFGDASAPQELKLMKVTLQNMFPTINVAEVKLADCRRIVLFNYDKATKSVEMRHYAIRAMPTGINKAIKKV-----------------------------------------------VQAKVPNLHNLDDIAEYVQGG-GGAASDSEVDDEESKVVLPDRYGGRGNVKAQR---SSIRLHELGPRVSMSLYKVERGLASGDVLYHSYITKTAEEVVALKNKFKEQDTLKRKRREEQ 996
            MP KGG+R+KT THVV  P G  GA E    +KVP+SFV K GKV   V++L EEMR VMEP+TARKLRER+ N++KD+  VS   GVTHL+ F QT++SL+ R+ R P GPTLTFKV Q+ L RHVRALQ+RPVE  QA+KT+PLVVLNNFGD  A  ++KLMKVTLQNMFP+INVA VKL DCRR+V+FN DK   +VEMRH+A+RA PTGI KAI KV                                               VQAKVP+LH L+DI+EYV GG GG  SDSEV+DEESK+ LPD Y GRGNVK+Q+   +SIRL ELGPR+++ L KVERGL  G+VLYHSY+TKTAEE+ A + K +++D LKRKRREEQ
Sbjct:    1 MPTKGGRRRKTRTHVVGFPSGAVGAPESEMTEKVPKSFVLKKGKVHSNVSDLAEEMRRVMEPHTARKLRERAKNTVKDYVSVSSVLGVTHLLVFTQTDKSLSLRVCRTPTGPTLTFKVRQFSLMRHVRALQKRPVEVNQAYKTSPLVVLNNFGDKQASSQVKLMKVTLQNMFPSINVATVKLQDCRRVVMFNLDKTNGTVEMRHFAVRATPTGIAKAITKVARSCACVYDGLVRVSSMDTRDSRREPGNVRLPRANKCCGFGVIFLQVVQAKVPDLHGLEDISEYVAGGMGGGISDSEVEDEESKITLPDDYVGRGNVKSQKRRDNSIRLQELGPRLTLELMKVERGLCEGEVLYHSYVTKTAEEIKAQRAKVEKRDNLKRKRREEQ 387          
BLAST of jgi.p|Trimin1|149082 vs. uniprot
Match: W7U3H8_9STRA (Brix domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3H8_9STRA)

HSP 1 Score: 367 bits (941), Expect = 5.540e-122
Identity = 192/362 (53.04%), Postives = 261/362 (72.10%), Query Frame = 1
Query:   16 GKRKKTHTHVVPPPEGTPG-AEEDKVPRSFVFKLGKVAKQVNELVEEMRGVMEPNTARKLRERSSNSLKDFAVVSKPFGVTHLMAFGQTERSLTYRIARAPDGPTLTFKVNQYCLRRHVRALQRRPVETTQAFKTAPLVVLNNFGDASAPQELKLMKVTLQNMFPTINVAEVKLADCRRIVLFNYDKATKSVEMRHYAIRAMPTGINKAIKKVVQAKVPNLHNLDDIAEYV-------QGGGGAASDSEVDDEESKVVLPDRYGGRGNVKAQRSSIRLHELGPRVSMSLYKVERGLASGDVLYHSYITKTAEEVVALKNKFKEQDTLKRKRREEQEANVARKKAALEEKKALKAEKRAAKLA 1077
            GKR+K  THV   PE      EE+++P++ V + G+   +   LV E+R +M P TA +L+ER +N +KDFA V+   G+TH+++  QT  SL+  IAR P GPTLTFKV +YCL+ HVRA Q+RP E+  A++TAPLVVLNNFGD S+P  +KLMK+T QNMFP +NV  V+L DCRRIVL++Y+  T  VE RH+AIRA P+ ++K++K++VQ K+P L  + DI+E++        GG GAASDSEV+DE S V+LPDR+ GRGN+K+Q+S+IRL ELGPR+ + L KV+RG   GDV+YH YI KT EEV AL+ K K +  LK++RREEQE NVARK+  L+E +  K E++AA+ A
Sbjct:    2 GKRRKRRTHVPVNPEQQQSLTEEERIPKTMVLRKGRTTPEAGALVTELRRLMGPETAARLKERRTNRMKDFAAVAGHLGLTHILSLSQTPASLSLHIARFPRGPTLTFKVERYCLQHHVRATQKRPYESLSAYQTAPLVVLNNFGDVSSPPYVKLMKITFQNMFPPLNVNTVRLTDCRRIVLYDYEADTGVVEQRHFAIRAAPSELHKSVKRLVQTKIPRLGKMTDISEFILGPALQAYGGAGAASDSEVEDEASHVILPDRFRGRGNLKSQKSAIRLAELGPRLRLRLMKVQRGFMEGDVIYHDYIKKTPEEVRALEAKAKAERELKKRRREEQEGNVARKELKLKEAQERKIERQAARAA 363          
BLAST of jgi.p|Trimin1|149082 vs. uniprot
Match: A0A3R7HU96_9STRA (Brix domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HU96_9STRA)

HSP 1 Score: 361 bits (926), Expect = 1.130e-118
Identity = 193/343 (56.27%), Postives = 248/343 (72.30%), Query Frame = 1
Query:    1 MPRKGGKRKKTHTHVVPPPEGTPGAEEDKVPRSFVFKLGKVAKQVNELVEEMRGVMEPNTARKLRERSSNSLKDFAVVSKPFGVTHLMAFGQTERSLTYRIARAPDGPTLTFKVNQYCLRRHVRALQRRPVETTQAFKTAPLVVLNNFGDASAPQE-LKLMKVTLQNMFPTINVAEVKLADCRRIVLFNYDKATKSVEMRHYAIRAMPTGINKAIKKVVQAKVPNLHNLDDIAEYVQGGG---GAASDSEVDDEESKVVLPDRYGGRGNVKAQRSSIRLHELGPRVSMSLYKVERGLASGDVLYHSYITKTAEEVVALKNKFKEQDTLKRKRREEQEANVARK 1017
            MPRKGGKR+KT THVV      PG E+D  P SFVFK+GKV   V+ LV++MR VM P TA KLRE+  N+LKDF  V  P GVTH + F  TE     +IAR P GPTL+FKV +Y L +H+  + +RPV+ + A K+ PLVVLNNF   +AP + +KLM VT QNMFP I+V  V L++CRR+VLFNY+K T +VE R Y +RA P G+++++K +V+AKVPNL+ L+DI+EYV G G   G+ASDSEVDDE + V LPD + GRGN KA++S++RL E+GPR+++SL KVERG+  GDVLYH+Y TKT EE    K K +    LKR+RREEQE NVA+K
Sbjct:    1 MPRKGGKRRKTRTHVVE----VPGNEKDDTPMSFVFKMGKVPSVVSTLVQDMRRVMAPYTADKLREKRKNTLKDFVHVGAPMGVTHFIFFTNTEAGTNLKIARIPRGPTLSFKVVKYSLMKHMHLVLKRPVDASLAMKSKPLVVLNNF---TAPDDHIKLMNVTFQNMFPAIDVQTVALSECRRVVLFNYEKETDTVEFRQYVVRAAPLGLSRSVKTIVKAKVPNLNKLEDISEYVLGNGAGIGSASDSEVDDEAAYVTLPDSFRGRGNRKAEKSAVRLTEIGPRLTLSLTKVERGICEGDVLYHAYKTKTPEEAAKAKAKHEAAVALKRQRREEQETNVAKK 336          
BLAST of jgi.p|Trimin1|149082 vs. uniprot
Match: G4YI29_PHYSP (Brix domain-containing protein n=6 Tax=Peronosporaceae TaxID=4777 RepID=G4YI29_PHYSP)

HSP 1 Score: 357 bits (917), Expect = 2.510e-117
Identity = 194/343 (56.56%), Postives = 246/343 (71.72%), Query Frame = 1
Query:    1 MPRKGGKRKKTHTHVVPPPEGTPGAEEDKVPRSFVFKLGKVAKQVNELVEEMRGVMEPNTARKLRERSSNSLKDFAVVSKPFGVTHLMAFGQTERSLTYRIARAPDGPTLTFKVNQYCLRRHVRALQRRPVETTQAFKTAPLVVLNNFGDASAPQE-LKLMKVTLQNMFPTINVAEVKLADCRRIVLFNYDKATKSVEMRHYAIRAMPTGINKAIKKVVQAKVPNLHNLDDIAEYVQGGG---GAASDSEVDDEESKVVLPDRYGGRGNVKAQRSSIRLHELGPRVSMSLYKVERGLASGDVLYHSYITKTAEEVVALKNKFKEQDTLKRKRREEQEANVARK 1017
            MPRKGGKR+KT THVV      PG E+D  P SFVFK+GKV   V+ LV++MR VM P TA KLRE+  N+LKDF  V  P GVTH + F  TE     +IAR P GPTL+FKV +Y L + +  + +RPV+ + A K+ PLVVLNNF   +AP + +KLM VT QNMFP I+V  V L++CRR+VLFNY+K T +VE R Y IRA P G++K++K +V+AKVPNL+ L+DI+EYV G G   G+ASDSEVDDE S V LPD + GRGN KA++S++RL E+GPR+++SL KVERG+  GDVLYH+Y TKT EE    K K +    LKR+  EEQEANVA+K
Sbjct:    1 MPRKGGKRRKTRTHVVE----APGVEKDDSPMSFVFKMGKVPGVVSTLVQDMRRVMAPYTADKLREKRKNTLKDFVHVGAPMGVTHFIFFTNTEAGTNLKIARIPRGPTLSFKVTKYSLMKQMHLVVKRPVDASAALKSKPLVVLNNF---TAPDDHIKLMNVTFQNMFPAIDVQTVALSECRRVVLFNYEKETDTVEFRQYVIRAAPLGLSKSVKTIVKAKVPNLNKLEDISEYVLGNGAGIGSASDSEVDDEASHVTLPDSFRGRGNRKAEKSAVRLTEIGPRLTLSLTKVERGICEGDVLYHAYKTKTPEESAKAKAKHEAALALKRQXXEEQEANVAKK 336          
BLAST of jgi.p|Trimin1|149082 vs. uniprot
Match: A0A6G0XQ99_9STRA (Brix domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQ99_9STRA)

HSP 1 Score: 350 bits (899), Expect = 8.130e-115
Identity = 183/340 (53.82%), Postives = 244/340 (71.76%), Query Frame = 1
Query:    1 MPRKGGKRKKTHTHVVPPPEGTPGAEEDKVPRSFVFKLGKVAKQVNELVEEMRGVMEPNTARKLRERSSNSLKDFAVVSKPFGVTHLMAFGQTERSLTYRIARAPDGPTLTFKVNQYCLRRHVRALQRRPVETTQAFKTAPLVVLNNF-GDASAPQELKLMKVTLQNMFPTINVAEVKLADCRRIVLFNYDKATKSVEMRHYAIRAMPTGINKAIKKVVQAKVPNLHNLDDIAEYVQGGG--GAASDSEVDDEESKVVLPDRYGGRGNVKAQRSSIRLHELGPRVSMSLYKVERGLASGDVLYHSYITKTAEEVVALKNKFKEQDTLKRKRREEQEANVA 1011
            MPRKGGKRKKT THV           +DK P+SFVFK+GK    V  LV++MR VM P TA +LRE+  N+++DF  V+ P GV+H +AF  T      ++ R P GPTL+FKV  Y L +H+ ++Q+RPV+++ AFKT+PLVVLNNF GD       KL+ VT QNMFP I+V  ++L++CRR+VLF+YDK T  VE R + IRAMP G++K++K +V++KVPNL N++DI+E+V GG   G  SDSEVDDE + VVLPD++ GRGN K+++S++RL E+GPR+++ L KVER +  GDVLYH+Y+ KT EE   LK K    + LKRKRREEQEANVA
Sbjct:    1 MPRKGGKRKKTRTHV----SSAANNADDKTPKSFVFKMGKAPSCVISLVQDMRQVMLPFTADRLREKKKNTIQDFVHVAAPLGVSHFLAFSHTTAGTNMKLVRLPRGPTLSFKVESYSLMKHIHSVQKRPVDSSLAFKTSPLVVLNNFTGDED---HAKLLNVTFQNMFPAIDVQTIQLSECRRVVLFHYDKETGLVEFRQFVIRAMPLGLSKSVKTLVKSKVPNLGNMEDISEFVFGGANTGMTSDSEVDDESAHVVLPDKFRGRGNQKSEKSAVRLAEVGPRMTLKLTKVERDVCDGDVLYHAYVQKTPEEAAKLKAKKDMANALKRKRREEQEANVA 333          
BLAST of jgi.p|Trimin1|149082 vs. uniprot
Match: W4HCI7_9STRA (Brix domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HCI7_9STRA)

HSP 1 Score: 351 bits (900), Expect = 1.260e-114
Identity = 186/357 (52.10%), Postives = 254/357 (71.15%), Query Frame = 1
Query:    1 MPRKGGKRKKTHTHVVPPPEGTPGAEEDKVPRSFVFKLGKVAKQVNELVEEMRGVMEPNTARKLRERSSNSLKDFAVVSKPFGVTHLMAFGQTERSLTYRIARAPDGPTLTFKVNQYCLRRHVRALQRRPVETTQAFKTAPLVVLNNFGDASAPQE-LKLMKVTLQNMFPTINVAEVKLADCRRIVLFNYDKATKSVEMRHYAIRAMPTGINKAIKKVVQAKVPNLHNLDDIAEYVQGGG--GAASDSEVDDEESKVVLPDRYGGRGNVKAQRSSIRLHELGPRVSMSLYKVERGLASGDVLYHSYITKTAEEVVALKNKFKEQDTLKRKRREEQEANVARKKAALEEKKALKAEKR 1062
            MPRKGGKRKKT THV     G     +DK P+SFVFK+GK    V  LV++MR VM P TA +LRE+  N+++DF  V+ P GV+H +AF  T+     ++ R P GPTL+FKV  Y L +H++ +Q+RPV+ + AFKT+PLVVLNNF   + P++ +KL+  T QNMFP I+V  ++L +CRR+VLF+YDK    VE R + IRAMP G++K++K +V+++VPNL N++DIA++V GG   G  SDSEVDDE + VVLPD++ GRGN K++RS++RL E+GPR+++ L KVER +  GDVLYH+Y+ KT EE   LK K    + LKRKRREEQE NV++K+ A E  K  KA K+
Sbjct:    1 MPRKGGKRKKTRTHVA---TGAATNADDKTPKSFVFKMGKAPACVLSLVQDMRQVMLPFTADRLREKKKNTIQDFVHVAAPLGVSHFLAFTNTDAGTNMKLVRLPRGPTLSFKVESYSLMKHIQRIQKRPVDASLAFKTSPLVVLNNF---TGPEDHIKLLNATFQNMFPAIDVQTIQLTECRRVVLFHYDKDADVVEFRQFVIRAMPLGLSKSVKTLVKSRVPNLGNMEDIADFVFGGTNTGMTSDSEVDDEAAHVVLPDKFRGRGNQKSERSAVRLAEVGPRMTLKLTKVERDMCDGDVLYHAYVQKTPEEAAKLKAKKDMANALKRKRREEQEENVSKKEHAKEXXKLAKATKK 351          
BLAST of jgi.p|Trimin1|149082 vs. uniprot
Match: A0A024USK4_9STRA (Brix domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024USK4_9STRA)

HSP 1 Score: 350 bits (897), Expect = 3.570e-114
Identity = 181/341 (53.08%), Postives = 245/341 (71.85%), Query Frame = 1
Query:    1 MPRKGGKRKKTHTHVVPPPEGTPGAEEDKVPRSFVFKLGKVAKQVNELVEEMRGVMEPNTARKLRERSSNSLKDFAVVSKPFGVTHLMAFGQTERSLTYRIARAPDGPTLTFKVNQYCLRRHVRALQRRPVETTQAFKTAPLVVLNNFGDASAPQELKLMKVTLQNMFPTINVAEVKLADCRRIVLFNYDKATKSVEMRHYAIRAMPTGINKAIKKVVQAKVPNLHNLDDIAEYVQGGG--GAASDSEVDDEESKVVLPDRYGGRGNVKAQRSSIRLHELGPRVSMSLYKVERGLASGDVLYHSYITKTAEEVVALKNKFKEQDTLKRKRREEQEANVARK 1017
            MPRKGGKRKKT THV     G     +DK P+SFVFKLGK    +  LV++MR VM P TA +LRE+  N+++DF  V+ P GV+H +AF  T+     ++ R P GPTL+FKV +Y L +H++ +Q+RPV+ + AFKT+PLVVLNNF        +KL+ VT QNMFP I+V  ++L++CRR+VLF+YDK    VE R + IRAMP G++K++K +V+++VPNL N++DIA++V GG   G  SDSEVDDE + VVLPD++ GRGN KA++S++RL E+GPR+++ L KVER L  GDVLYH+Y+ KT EE   LK K    + LKRKRREEQE NV++K
Sbjct:    1 MPRKGGKRKKTRTHVA---TGAATNADDKTPKSFVFKLGKAPGCIISLVQDMRQVMLPFTADRLREKKKNTIQDFVHVAAPLGVSHFLAFSNTDAGTNMKLVRLPRGPTLSFKVVRYSLMKHIQRIQKRPVDASLAFKTSPLVVLNNF--TGTEDHIKLLNVTFQNMFPAIDVQTIQLSECRRVVLFHYDKEEDLVEFRQFVIRAMPLGLSKSVKTLVKSRVPNLGNMEDIADFVFGGTNTGMTSDSEVDDETAHVVLPDKFRGRGNQKAEKSAVRLAEVGPRLTLKLTKVERDLCDGDVLYHAYVQKTPEEAAKLKAKKDMANALKRKRREEQEQNVSKK 336          
BLAST of jgi.p|Trimin1|149082 vs. uniprot
Match: A0A1W0A5A6_9STRA (SWI4 1, Peter Pan suppressor n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A5A6_9STRA)

HSP 1 Score: 347 bits (891), Expect = 1.490e-113
Identity = 179/344 (52.03%), Postives = 244/344 (70.93%), Query Frame = 1
Query:    1 MPRKGGKRKKTHTHV---VPPPEGTPGAEEDKVPRSFVFKLGKVAKQVNELVEEMRGVMEPNTARKLRERSSNSLKDFAVVSKPFGVTHLMAFGQTERSLTYRIARAPDGPTLTFKVNQYCLRRHVRALQRRPVETTQAFKTAPLVVLNNFGDASAPQELKLMKVTLQNMFPTINVAEVKLADCRRIVLFNYDKATKSVEMRHYAIRAMPTGINKAIKKVVQAKVPNLHNLDDIAEYVQGGG--GAASDSEVDDEESKVVLPDRYGGRGNVKAQRSSIRLHELGPRVSMSLYKVERGLASGDVLYHSYITKTAEEVVALKNKFKEQDTLKRKRREEQEANVARK 1017
            MP KGG+RKKT TH    VP        E+DK P+SFVFK+GK    V  LV++MR VM P TA KLRE+  N+++DF  V+ P GVTH MAF  TE     ++ R P GPTL+FKV  Y L +H+ ++Q+RPV+ + AFK +PLVVLNNF      + +KL+ VT QNMFP I+V  + LADCRR+VLFNYDK T +VE R Y IRAMP G++K++K +V+A++PNL N  DI+++V G    G  SDSEVDDE++ V+LPD++ GRGN K+++S++RL E+GPR+++ L KVE+G+  GD+LYH+++ KT +E   +K +   ++ LKRKRREEQ ANVA K
Sbjct:    1 MPHKGGRRKKTRTHANNNVP--------EDDKTPKSFVFKMGKAPACVINLVQDMRQVMLPYTADKLREKRKNTIQDFVHVAAPLGVTHFMAFSNTEAGTNMKLVRLPRGPTLSFKVVAYSLMKHIHSIQKRPVDASLAFKKSPLVVLNNFNGTD--EHVKLLNVTFQNMFPAIDVQTIALADCRRVVLFNYDKETGNVEFRQYVIRAMPLGLSKSVKTLVKARIPNLGNAQDISDFVFGNTNTGMTSDSEVDDEDAHVILPDKFRGRGNQKSEKSAVRLAEVGPRLTLKLVKVEKGICDGDILYHAFVQKTPKEAAKIKARKDMENALKRKRREEQAANVAAK 334          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|149082 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZHT7_9STRA3.190e-257100.00Brix domain-containing protein (Fragment) n=1 Tax=... [more]
D7FV54_ECTSI5.170e-15666.30Brix domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KLG7_9PHAE1.110e-13657.88Brix domain-containing protein n=1 Tax=Ectocarpus ... [more]
W7U3H8_9STRA5.540e-12253.04Brix domain protein n=1 Tax=Nannochloropsis gadita... [more]
A0A3R7HU96_9STRA1.130e-11856.27Brix domain-containing protein n=3 Tax=Phytophthor... [more]
G4YI29_PHYSP2.510e-11756.56Brix domain-containing protein n=6 Tax=Peronospora... [more]
A0A6G0XQ99_9STRA8.130e-11553.82Brix domain-containing protein n=1 Tax=Aphanomyces... [more]
W4HCI7_9STRA1.260e-11452.10Brix domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A024USK4_9STRA3.570e-11453.08Brix domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A1W0A5A6_9STRA1.490e-11352.03SWI4 1, Peter Pan suppressor n=1 Tax=Thraustotheca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_103contigContig_103:446930..450250 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|149082|gw1.103.59.1
BRITEko00000,ko00001,ko01000,ko03009,ko04030
KEGG rclassRC02020,RC02021
KEGG ReactionR07320,R07321
KEGG Pathwayko00906,ko04080,map00906,map04080
KEGG koko:K08387,ko:K14593,ko:K14859
EC5.3.99.8
GOsGO:0000003,GO:0000027,GO:0000463,GO:0000470,GO:0000746,GO:0000747,GO:0001558,GO:0001560,GO:0002164,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0007154,GO:0007275,GO:0007276,GO:0007292,GO:0007444,GO:0008150,GO:0008152,GO:0008361,GO:0009605,GO:0009791,GO:0009888,GO:0009987,GO:0009991,GO:0010467,GO:0010876,GO:0016043,GO:0016070,GO:0016072,GO:0019843,GO:0019915,GO:0019953,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0030684,GO:0030687,GO:0031668,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032991,GO:0033036,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0035295,GO:0040008,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044703,GO:0044764,GO:0046483,GO:0048513,GO:0048609,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051179,GO:0051235,GO:0051704,GO:0051716,GO:0060429,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070925,GO:0071496,GO:0071704,GO:0071826,GO:0071840,GO:0090066,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990904
Preferred namePPAN
Descriptionribosomal large subunit assembly
COG categoryO
Max annot lvl2759|Eukaryota
EggNOG OGsKOG2963@1|root,KOG2963@2759|Eukaryota
Evalue8.47e-157
Seed ortholog2880.D7FV54
Hectar predicted targeting categoryother localisation
TranscriptId149404
TrackFilteredModels1
ProteinId149082
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|149082gene_15131Tribonema minus UTEX_B_3156 geneContig_103 446930..450250 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|149082Trimin1|149082|gw1.103.59.1Tribonema minus UTEX_B_3156 polypeptideContig_103 446930..450250 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_15131_1exon_15131_1Tribonema minus UTEX_B_3156 exonContig_103 446930..447268 +
exon_15131_2exon_15131_2Tribonema minus UTEX_B_3156 exonContig_103 447693..448001 +
exon_15131_3exon_15131_3Tribonema minus UTEX_B_3156 exonContig_103 448449..448576 +
exon_15131_4exon_15131_4Tribonema minus UTEX_B_3156 exonContig_103 449112..449253 +
exon_15131_5exon_15131_5Tribonema minus UTEX_B_3156 exonContig_103 450008..450250 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_15131CDS_15131Tribonema minus UTEX_B_3156 CDSContig_103 446930..447268 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_15131 ID=mRNA_15131|Name=jgi.p|Trimin1|149082|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1161bp|location=Sequence derived from alignment at Contig_103:446930..450250+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCTCGCAAGGGTGGCAAGCGAAAGAAGACACACACCCATGTTGTGCC
ACCACCGGAAGGCACCCCCGGCGCTGAGGAGGACAAGGTGCCACGCAGCT
TCGTCTTCAAGCTCGGGAAGGTGGCCAAGCAGGTCAATGAGCTGGTGGAG
GAGATGCGCGGCGTCATGGAGCCGAACACAGCGCGCAAGCTGCGAGAGCG
GTCGAGCAACTCGCTGAAGGATTTTGCAGTGGTGTCAAAGCCATTTGGAG
TCACGCACTTGATGGCGTTTGGGCAGACGGAGAGGAGCTTGACCTACAGA
ATAGCACGAGCCCCAGATGGGCCAACTCTCACGTTCAAGGTCAACCAGTA
CTGCCTGCGGCGGCACGTGCGCGCACTGCAGCGGCGCCCCGTAGAGACGA
CGCAGGCATTCAAAACGGCGCCGCTGGTGGTGCTGAACAACTTCGGCGAC
GCCTCCGCGCCGCAAGAGTTGAAGTTGATGAAAGTGACGCTCCAGAATAT
GTTCCCCACCATCAACGTCGCCGAGGTGAAGCTGGCGGACTGCCGGCGCA
TCGTGCTGTTCAACTATGACAAGGCCACTAAGAGCGTGGAGATGCGGCAC
TACGCCATCCGCGCCATGCCCACGGGCATCAACAAGGCCATCAAGAAGGT
GGTGCAAGCCAAGGTCCCGAATCTGCACAATCTGGACGATATTGCGGAGT
ACGTACAGGGGGGCGGAGGTGCGGCTTCGGACAGCGAAGTAGATGACGAG
GAGAGCAAAGTGGTCTTGCCCGATAGGTACGGCGGGCGCGGCAACGTCAA
GGCGCAGCGCAGCAGCATCCGCCTGCACGAGCTCGGCCCGCGCGTGAGCA
TGTCGCTGTACAAGGTGGAGCGTGGTCTCGCGTCGGGCGACGTTCTCTAC
CACTCATACATCACCAAGACTGCAGAGGAGGTGGTCGCGCTCAAGAACAA
GTTCAAGGAGCAGGACACCCTCAAGCGCAAGCGCAGAGAAGAGCAGGAGG
CCAATGTCGCACGCAAAAAGGCGGCACTGGAGGAGAAAAAGGCTCTCAAG
GCGGAAAAGCGCGCAGCGAAACTGGCAGCAAATGGCGGGGAAGTGGGGAG
CGCCGATGGCGATGATGATGACGATGAAGTTGAAGACGATGTTGAAGATG
CAATGGACGAG
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protein sequence of jgi.p|Trimin1|149082

>Trimin1|149082|gw1.103.59.1 ID=Trimin1|149082|gw1.103.59.1|Name=jgi.p|Trimin1|149082|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=387bp
MPRKGGKRKKTHTHVVPPPEGTPGAEEDKVPRSFVFKLGKVAKQVNELVE
EMRGVMEPNTARKLRERSSNSLKDFAVVSKPFGVTHLMAFGQTERSLTYR
IARAPDGPTLTFKVNQYCLRRHVRALQRRPVETTQAFKTAPLVVLNNFGD
ASAPQELKLMKVTLQNMFPTINVAEVKLADCRRIVLFNYDKATKSVEMRH
YAIRAMPTGINKAIKKVVQAKVPNLHNLDDIAEYVQGGGGAASDSEVDDE
ESKVVLPDRYGGRGNVKAQRSSIRLHELGPRVSMSLYKVERGLASGDVLY
HSYITKTAEEVVALKNKFKEQDTLKRKRREEQEANVARKKAALEEKKALK
AEKRAAKLAANGGEVGSADGDDDDDEVEDDVEDAMDE
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mRNA from alignment at Contig_103:446930..450250+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_15131 ID=mRNA_15131|Name=jgi.p|Trimin1|149082|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3321bp|location=Sequence derived from alignment at Contig_103:446930..450250+ (Tribonema minus UTEX_B_3156 )
ATGCCTCGCAAGGGTGGCAAGCGAAAGAAGACACACACCCATGTTGTGCC ACCACCGGAAGGCACCCCCGGCGCTGAGGAGGACAAGGTGCCACGCAGCT TCGTCTTCAAGCTCGGGAAGGTGGCCAAGCAGGTCAATGAGCTGGTGGAG GAGATGCGCGGCGTCATGGAGCCGAACACAGCGCGCAAGCTGCGAGAGCG GTCGAGCAACTCGCTGAAGGATTTTGCAGTGGTGTCAAAGCCATTTGGAG TCACGCACTTGATGGCGTTTGGGCAGACGGAGAGGAGCTTGACCTACAGA ATAGCACGAGCCCCAGATGGGCCAACTCTCACGTTCAAGGTGAGTGCCCA CGCACAGAGGAGTGTGATGGTTATTTGCAGTTGTAGACGTTGCTGAAATT TCTGTGAACATTGATGCTGTGAGGGCGCAACATTCGTTACGTCATCACAG TTTGAGCTCATGACGAGCCTGCATCGTACCCTGATGCAGTGATGCTGAGT TGCCTGCTGCCTGCATGGGCTTGTGCCAATGCAGCCTGCATTTGGTTTTG CCAAACTGCACCATACAACCGTCTAGGTACAATGCATGAGCATTGTGTAA GCTCCGTGCCGTCAGTATTGGATGCATGATGTTCCCAGTGGTAACCTGCT TGGTGTAATTGTGCTATTCATGCACTAGAAAGATGATTCAATGCACGGTG TGTAGACCTGATTTGCCGCTCCAATATACACATCCCAATTGGGCTATGCA AATTGTCTCGCAGGTCAACCAGTACTGCCTGCGGCGGCACGTGCGCGCAC TGCAGCGGCGCCCCGTAGAGACGACGCAGGCATTCAAAACGGCGCCGCTG GTGGTGCTGAACAACTTCGGCGACGCCTCCGCGCCGCAAGAGTTGAAGTT GATGAAAGTGACGCTCCAGAATATGTTCCCCACCATCAACGTCGCCGAGG TGAAGCTGGCGGACTGCCGGCGCATCGTGCTGTTCAACTATGACAAGGCC ACTAAGAGCGTGGAGATGCGGCACTACGCCATCCGCGCCATGCCCACGGG CATCAACAAGGCCATCAAGAAGGTGATTTCACTTTGCACCTTGCCTCTAA GCGCGCATGTTGCACAATGTGTGTGGTGAATGAATTGTATAGTCTTATTT ATGTACACGCATGCATGTGAAGAGGTGCATGCACAAAGGCGCAACCCCTT GCTGTTATGCCAGACAGACGTACATGCCAGACATCCGTGCATGACTCTTT GGCCACCAATGTTTTTTGTCGTGGTGTCCAAGGGTCCAACTTTCCTCCAC CGCATCTAACGGCCCACTTTGTTAGCAGATTCAAGCGAAACTGCATACGC CAAGTCTACGGCAGCGGTCCGCAGTATCTGGCTCAGTGCAGCGTGTGCTT TCTGTGTGTGTACACGATGTCAGTGCTCAGCAAAGGTGCGTCACGCTTGC GGTTATACCTTCACTTCACGCCATCTCATGCAGTTGCCCACTGTGTATTA CATCCTTGTATACTCGCAGGTGGTGCAAGCCAAGGTCCCGAATCTGCACA ATCTGGACGATATTGCGGAGTACGTACAGGGGGGCGGAGGTGCGGCTTCG GACAGCGAAGTAGATGACGAGGAGAGCAAAGTGGTCTTGCCCGATAGGTG AGCGCCTGTCACAGTACTTCAAATGCGTACTTACAACGGCTCTGAGTGTG ATCAGGAGGTCCGCAGTGTATTGTGCTGCCTTGTTGTTGTCGCCGCCCGT ATGCGCACGGTGAAGCTTCTAAAAAGGAGTTGCGGGCTGAAGCCAAATCA ACACCTCTGAAGAACTTGGCAGTAGTTGGCGGCTTGCTGCTTTGCTGTGC ACAGACTTAGGGTTAGGGTTAGGGTTAGGTAACCCTAACCCTTAGTCCCG CGACGGTGCCTTTTGCTGCACCTGTACGTAGTTCGTGCCTTGAGGTACAC ACACACATGACCTCACTGCGGCGGCGAATGCGGCGACGCTCCGCGCAGGT ACGGCGGGCGCGGCAACGCCAAGGCGCAGCGCAGCAGCACCGAATGTTAT GAATATACTCAAAGCATTTGAGAGCTTCGAGATGTCCACTTCGCAAAGCA TGTATACATGGAATCTTCGCCGCATGATCAAGTATCTGTAGATAAATAAG CGCTTACGGAAATGTGGCCACACTTTTCGCAGGTACGGCGGGCGCGGCAA CGTCAAGGCGCAGCGCAGCAGCATCCGCCTGCACGAGCTCGGCCCGCGCG TGAGCATGTCGCTGTACAAGGTGGAGCGTGGTCTCGCGTCGGGCGACGTT CTCTACCACTCATACATCACCAAGGTCAGGGGAGGGGCCGTGCTGCTGAG CCGTGCCGCTGAGCTGTGCTGCTCAAACTGTGCTGCCGAGCCGTGTGCCG CTGAGCCGTGCTGCTGAGGCGTGCTGCTGGCTGAAACGGTGCTGTTGAGC GCTGCTGTTGACGTGTGTCGCTGAGGCGTGCTGCTGAGCCATGCTGTCCG GCAGCCGCGTGCGCACGCGCGCCATGCAGCTAGTGGGGGACTCAATGCAG TGGGCTGGCTGGGTGTGCAGCTGTTGCCTAAGCGCATGCGCACCACAGGG GGTTTTGAAGTTGTGGGGGCCAGCGGCGCACCTGCGGCTATTGTGGTCAT GTCGAACGTGTGCATGTGAAGCTGTGTGACTGTAACTGGCGCGTGATGTG GCGGGGCAATCTGTGAATGCAACTGGTGTGGCGCCAACATGCAGTGATGT TGCCATTATGGGGCATGGTCACAGGTGTCAACAGCCCCTCATTTTGCTAA TTCAGTGGTGCTCAGAGATTGAATTGCATGTTCACATGGGCGAAAGAATT CCCTAGCTGCTATGACACCTCTCAATCAACAAACAAGCAGCCTTTTGTTG GATCAACTTCCAACTATTTCATGCTGGCGGTGCCCAGAGCAAGTTGCATC GCTGCCACTTCGCAAGGGCGTTTAATCACTTTACTCAACTTAACTTTACT CGAACTTTAAATCTCCCCCAACTTCAACCTGTGACGACCCCCCCCCCCCC CCCCCCAACCTTCCCCTTATCCACACAGACTGCAGAGGAGGTGGTCGCGC TCAAGAACAAGTTCAAGGAGCAGGACACCCTCAAGCGCAAGCGCAGAGAA GAGCAGGAGGCCAATGTCGCACGCAAAAAGGCGGCACTGGAGGAGAAAAA GGCTCTCAAGGCGGAAAAGCGCGCAGCGAAACTGGCAGCAAATGGCGGGG AAGTGGGGAGCGCCGATGGCGATGATGATGACGATGAAGTTGAAGACGAT GTTGAAGATGCAATGGACGAG
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Coding sequence (CDS) from alignment at Contig_103:446930..450250+

>mRNA_15131 ID=mRNA_15131|Name=jgi.p|Trimin1|149082|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1161bp|location=Sequence derived from alignment at Contig_103:446930..450250+ (Tribonema minus UTEX_B_3156 )
ATGCCTCGCAAGGGTGGCAAGCGAAAGAAGACACACACCCATGTTGTGCC
ACCACCGGAAGGCACCCCCGGCGCTGAGGAGGACAAGGTGCCACGCAGCT
TCGTCTTCAAGCTCGGGAAGGTGGCCAAGCAGGTCAATGAGCTGGTGGAG
GAGATGCGCGGCGTCATGGAGCCGAACACAGCGCGCAAGCTGCGAGAGCG
GTCGAGCAACTCGCTGAAGGATTTTGCAGTGGTGTCAAAGCCATTTGGAG
TCACGCACTTGATGGCGTTTGGGCAGACGGAGAGGAGCTTGACCTACAGA
ATAGCACGAGCCCCAGATGGGCCAACTCTCACGTTCAAGGTCAACCAGTA
CTGCCTGCGGCGGCACGTGCGCGCACTGCAGCGGCGCCCCGTAGAGACGA
CGCAGGCATTCAAAACGGCGCCGCTGGTGGTGCTGAACAACTTCGGCGAC
GCCTCCGCGCCGCAAGAGTTGAAGTTGATGAAAGTGACGCTCCAGAATAT
GTTCCCCACCATCAACGTCGCCGAGGTGAAGCTGGCGGACTGCCGGCGCA
TCGTGCTGTTCAACTATGACAAGGCCACTAAGAGCGTGGAGATGCGGCAC
TACGCCATCCGCGCCATGCCCACGGGCATCAACAAGGCCATCAAGAAGGT
GGTGCAAGCCAAGGTCCCGAATCTGCACAATCTGGACGATATTGCGGAGT
ACGTACAGGGGGGCGGAGGTGCGGCTTCGGACAGCGAAGTAGATGACGAG
GAGAGCAAAGTGGTCTTGCCCGATAGGTACGGCGGGCGCGGCAACGTCAA
GGCGCAGCGCAGCAGCATCCGCCTGCACGAGCTCGGCCCGCGCGTGAGCA
TGTCGCTGTACAAGGTGGAGCGTGGTCTCGCGTCGGGCGACGTTCTCTAC
CACTCATACATCACCAAGACTGCAGAGGAGGTGGTCGCGCTCAAGAACAA
GTTCAAGGAGCAGGACACCCTCAAGCGCAAGCGCAGAGAAGAGCAGGAGG
CCAATGTCGCACGCAAAAAGGCGGCACTGGAGGAGAAAAAGGCTCTCAAG
GCGGAAAAGCGCGCAGCGAAACTGGCAGCAAATGGCGGGGAAGTGGGGAG
CGCCGATGGCGATGATGATGACGATGAAGTTGAAGACGATGTTGAAGATG
CAATGGACGAG
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