mRNA_15008 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|353248
Unique NamemRNA_15008
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|353248 vs. uniprot
Match: A0A835Z968_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z968_9STRA)

HSP 1 Score: 684 bits (1764), Expect = 1.810e-247
Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 1 
Query:    1 MGLLYGALITFIPTIKSSLPAPLTALLSSPVPDTPVTEPPAERTAAEPPSKRDRKLWKLNFSAMKRKLLGRSAKAPGADGGVLLYGYYQMNDQKWAALRQLKEEVDARPELRRHAREVQHELTELTLLRFLEVSYWRVEKDGDAGPRLVDVIARTVEWRDQMGAVAMAPAAVRAPAAAGKLYVRGADRQGRPVIHFRPAREHAPFDVAANTRLVVYTLERALRAMPPGQSRFAVVVDCAGFTLGNFPPVAYIKEEXXXXXXXXXXXXXXXXXXXXXXEARLAVTGALDASLGVMMNHYPMRLGYVRIVNAGRGLNFFWKIIASMLQERTTKKISFLGGPATCDALLSELPPQALPDTICGTDTWTYDVDQYLF 1119
            MGLLYGALITFIPTIKSSLPAPLTALLSSPVPDTPVTEPPAERTAAEPPSKRDRKLWKLNFSAMKRKLLGRSAKAPGADGGVLLYGYYQMNDQKWAALRQLKEEVDARPELRRHAREVQHELTELTLLRFLEVSYWRVEKDGDAGPRLVDVIARTVEWRDQMGAVAMAPAAVRAPAAAGKLYVRGADRQGRPVIHFRPAREHAPFDVAANTRLVVYTLERALRAMPPGQSRFAVVVDCAGFTLGNFPPVAYIKEEXXXXXXXXXXXXXXXXXXXXXXEARLAVTGALDASLGVMMNHYPMRLGYVRIVNAGRGLNFFWKIIASMLQERTTKKISFLGGPATCDALLSELPPQALPDTICGTDTWTYDVDQYLF
Sbjct:    1 MGLLYGALITFIPTIKSSLPAPLTALLSSPVPDTPVTEPPAERTAAEPPSKRDRKLWKLNFSAMKRKLLGRSAKAPGADGGVLLYGYYQMNDQKWAALRQLKEEVDARPELRRHAREVQHELTELTLLRFLEVSYWRVEKDGDAGPRLVDVIARTVEWRDQMGAVAMAPAAVRAPAAAGKLYVRGADRQGRPVIHFRPAREHAPFDVAANTRLVVYTLERALRAMPPGQSRFAVVVDCAGFTLGNFPPVAYIKEEXXXXXXXXXXXXXXXXXXXXXXEARLAVTGALDASLGVMMNHYPMRLGYVRIVNAGRGLNFFWKIIASMLQERTTKKISFLGGPATCDALLSELPPQALPDTICGTDTWTYDVDQYLF 373
[Close]
BLAST of jgi.p|Trimin1|353248 vs. uniprot
Match: D7FQ39_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ39_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 3.500e-42
Identity = 92/247 (37.25%), Postives = 129/247 (52.23%), Query Frame = 1 
Query:  379 LLRFLEVSYWRVEKDGDAGPRLVDVIARTVEWRDQMGAVAMAPAAVRAPAAAGKLYVRGADRQGRPVIHFRPAREHAPFDVAANTRLVVYTLERALRAMPPGQSRFAVVVDCAGFTLGNFPPVAYIKEEXXXXXXXXXXXXXXXXXXXXXXEARLAVTGALDASLGVMMNHYPMRLGYVRIVNAGRGLNFFWKIIASMLQERTTKKISFLGGPATCDALLSELPPQALPDTICG-TDTWTYDVDQYL 1116
            ++R+LE++YW +E  G   P   D +A TV WR+      +    V   A  GK+YVRG DRQ RP+IH+RP  E + FD      L+ +TLERA  ++P GQ++FAVV DC+GF     PP+  +K                                    +   M  HYPMRLGYV IVNAG  + F WK+I+++L+ERT +KI+FL        L   + P ALP ++ G  D +TY  ++YL
Sbjct:    1 MMRYLEMAYWTMESMGQPLP---DAVASTVRWREDATPHLLTDNQVAEEAKYGKMYVRGLDRQQRPIIHYRPGLEKS-FDTEKGLNLLFHTLERAKGSLPKGQTQFAVVADCSGFGPSKTPPLPMLK-----------------------------------TAFITMQRHYPMRLGYVVIVNAGGPITFVWKLISTVLEERTKEKIAFLSKKEAEATLTGLIDPSALPASLPGGLDDFTYSNEEYL 208
[Close]
BLAST of jgi.p|Trimin1|353248 vs. uniprot
Match: A0A6H5JFY3_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFY3_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 1.230e-21
Identity = 60/172 (34.88%), Postives = 84/172 (48.84%), Query Frame = 1 
Query:  604 HAPFDVAANTRLVVYTLERALRAMPPGQSRFAVVVDCAGFTLGNFPPVAYIKEEXXXXXXXXXXXXXXXXXXXXXXEARLAVTGALDASLGVMMNHYPMRLGYVRIVNAGRGLNFFWKIIASMLQERTTKKISFLGGPATCDALLSELPPQALPDTICG-TDTWTYDVDQYL 1116
            H   D+     L+ +TLERA  ++P GQ++FAVV DC+GF     PP+  +K                                    +   M  HYPMRLGYV IVNAG  + F WK+I+++L+ERT +KI+FL        L   + P ALP ++ G  D +TY   +YL
Sbjct:   11 HNVRDILEGLNLLFHTLERAKGSLPKGQTQFAVVADCSGFGPSKTPPLPMLK-----------------------------------TAFITMQRHYPMRLGYVVIVNAGGPITFVWKLISTVLEERTKEKIAFLSKKEAEATLTGLIDPSALPASLPGGLDDFTYSNKEYL 147
[Close]
BLAST of jgi.p|Trimin1|353248 vs. uniprot
Match: A0A7S0N4T9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N4T9_9CRYP)

HSP 1 Score: 96.3 bits (238), Expect = 5.820e-19
Identity = 62/218 (28.44%), Postives = 103/218 (47.25%), Query Frame = 1 
Query:  367 TELTLLRFLEVSYWRVEKDGDAGPRLVDVIARTVEWRDQMGAVAMAPAAVRAPAAAGKLYVRGADRQGRPVIHFRPAREHAPFDVAANTRLVVYTLERALRAMPP--GQSRFAVVVDCAGFTLGNFPPVAYIKEEXXXXXXXXXXXXXXXXXXXXXXEARLAVTGALDASLGVMMNHYPMRLGYVRIVNAGRGLNFFWKIIASMLQERTTKKISFLGG 1014
            ++ TL R+L    W ++K  +       ++  T++WR +  A  ++ A+V      GK++V G D QGRPV++ RPA E++  D   N R +VY ++RA+R M    G  +  VV+DC  ++  N PP+                                       A+LG++ NHYP RLG   I+ A    + F++ I+  + + T +KI F+ G
Sbjct:   75 SDFTLRRYLAARNWNLDKAKN-------MLRETLDWRIKFQADEISGASVFENGKTGKVFVSGLDLQGRPVLYMRPAMENSQMDHDGNLRHLVYNMDRAVRCMDEVNGVGKMVVVLDCHNYSARNAPPLR-----------------------------------TSQATLGILQNHYPERLGQFVIIEAPWYFHLFFRAISPFIDKVTAQKILFITG 250
[Close]
BLAST of jgi.p|Trimin1|353248 vs. uniprot
Match: A0A6A5C3G4_NAEFO (CRAL-TRIO domain-containing protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C3G4_NAEFO)

HSP 1 Score: 88.6 bits (218), Expect = 4.400e-16
Identity = 69/248 (27.82%), Postives = 111/248 (44.76%), Query Frame = 1 
Query:  364 LTELTLLRFLEVSYWRVEKDGDAGPRLVDVIARTVEWRDQMGAVAMAPAAVRAPAAAGKLYVRGADRQGRPVIHFRPAREHAPFDVAANTRLVVYTLERALRAMPPGQSRFAVVVDCAGFTLGNFPPVAYIKEEXXXXXXXXXXXXXXXXXXXXXXEARLAVTGALDASLGVMMNHYPMRLGYVRIVNAGRGLNFFWKIIASMLQERTTKKISFLGGPATCDALL--SELPPQALPDTICGTDTWTYD 1101
            L E  L+RFL    + + K      +L++     +EWR       +    V + A++GKL+ RG D+  RP+++  PARE++  D   N +L+VYTLERA+ AMP G  +   ++D  G++  N  P++  K+                                   +L ++ + YP RLG   +V+     N FWK I+  +   T  KI F+ G     A +    +    +  T  GT T+TYD
Sbjct:   66 LDEAALIRFLRARDYDINK----AEKLMNTC---LEWRRSFKPDEITAEEVDSEASSGKLFQRGFDKMNRPIVYMFPARENST-DYEKNIKLLVYTLERAVDAMPEGVEQMCWIIDFNGYSTRNSLPLSVAKQ-----------------------------------TLNILNDCYPERLGACFMVDTPFIFNIFWKAISPFINPVTKNKIHFVNGKDIEKAKIFGKYIDLAQIDTTWGGTSTFTYD 270
[Close]
BLAST of jgi.p|Trimin1|353248 vs. uniprot
Match: L1IW21_GUITC (CRAL-TRIO domain-containing protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1IW21_GUITC)

HSP 1 Score: 85.5 bits (210), Expect = 1.710e-15
Identity = 67/257 (26.07%), Postives = 112/257 (43.58%), Query Frame = 1 
Query:  367 TELTLLRFLEVSYWRVEKDGDAGPRLVDVIARTVEWRDQMGAVAMAPAAVRAPAAAGKLYVRGADRQGRPVIHFRPAREHAPFDVAANTRLVVYTLERALRAMPP--GQSRFAVVVDCAGFTLGNFPPVAYIKEEXXXXXXXXXXXXXXXXXXXXXXEARLAVTGALDASLGVMMNHYPMRLGYVRIVNAGRGLNFFWKIIASMLQERTTKKISFLGGP---ATCDALLSELPPQALPDTICGT--DTWTYDVDQYL 1116
            T+ TL R+L    + V K         +++  T+ WR      +++   VR     GK+ VRGADR+GRP++  RP +E++  D   N + +VY LERA+  M    G  +  V++D   +++ N PP+   +                                   A+L ++ +HYP RL    I++A      F+KII+  + + T  K+ F+ G    A  + L   +    LP +I G   D   +  D+Y 
Sbjct:   30 TDYTLKRYLHARKFDVAK-------AFNMLTATLAWRKDFDVESISMLKVRGNGETGKVVVRGADREGRPILFLRPGQENSKDDHDGNLKHLVYELERAVACMDELRGVGKMLVILDLQHYSMSNAPPMKTSR-----------------------------------ATLHILQDHYPERLAKFLIIDAPWLFQGFFKIISPFIDKETAAKLVFVNGKTAEAKREVLSKFVELNRLPKSIYGDLGDEEFFTADEYF 244
[Close]
BLAST of jgi.p|Trimin1|353248 vs. uniprot
Match: A0A0L0HFP1_SPIPD (CRAL-TRIO domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HFP1_SPIPD)

HSP 1 Score: 85.5 bits (210), Expect = 3.800e-15
Identity = 74/247 (29.96%), Postives = 104/247 (42.11%), Query Frame = 1 
Query:  271 NDQKWAALRQLKEEVDARPELRRHAREVQHELTELTLLRFLEVSYWRVEKDGDAGPRLVDVIARTVEWRDQMGAVAMAPAAVRAPAAAGKLYVRGADRQGRPVIHFRPAREHAP-FDVAANTRLVVYTLERALRAMPPGQSRFAVVVDCAGFTLGNFPPVAYIKEEXXXXXXXXXXXXXXXXXXXXXXEARLAVTGALDASLGVMMNHYPMRLGYVRIVNAGRGLNFFWKIIASMLQERTTKKISFL 1008
            N+++ A L QLKE V           E +    +  LLR+L  + W V       P     +  T+ WR +     + PA V   A  GK  V G D QGRP+I+  P +EH   +D     R VV+ LERA+RAMPPG     +V+D  G ++   PP +  K+                                    L ++ +HYP RLG   ++N    L  F+KII   L   T  KI F+
Sbjct:   33 NEEQIAQLDQLKELVPPLLTTGDERTEEEAWCDDACLLRYLRATKWNV-------PAAAKRLENTLIWRREYKPHKIDPAEVEEEAKMGKQIVSGFDLQGRPLIYMIPRKEHTKTYD--RQLRFVVFNLERAIRAMPPGVESLNLVIDYEGVSVRTSPPSSQAKKV-----------------------------------LAILGDHYPERLGMGFMINPSWYLWVFFKIIGPFLDPITRSKIHFV 235
[Close]
BLAST of jgi.p|Trimin1|353248 vs. uniprot
Match: D2V0F0_NAEGR (CRAL-TRIO domain-containing protein n=2 Tax=Naegleria gruberi TaxID=5762 RepID=D2V0F0_NAEGR)

HSP 1 Score: 84.3 bits (207), Expect = 1.110e-14
Identity = 66/248 (26.61%), Postives = 110/248 (44.35%), Query Frame = 1 
Query:  364 LTELTLLRFLEVSYWRVEKDGDAGPRLVDVIARTVEWRDQMGAVAMAPAAVRAPAAAGKLYVRGADRQGRPVIHFRPAREHAPFDVAANTRLVVYTLERALRAMPPGQSRFAVVVDCAGFTLGNFPPVAYIKEEXXXXXXXXXXXXXXXXXXXXXXEARLAVTGALDASLGVMMNHYPMRLGYVRIVNAGRGLNFFWKIIASMLQERTTKKISFLGGPATCDALL--SELPPQALPDTICGTDTWTYD 1101
            L E +LLRFL    + + K      +L++     +EWR       +    +   +++GKL+ RG D+  RP+I+  PARE++  D   N +L+VYT+ERA+ AMP G  +   ++D  G+T  N PP +  K+                                   +L ++   YP RLG   +V+     N FW+ I+  +   T  KI F+ G  +  A +    +    +  T  GT T+ ++
Sbjct:   57 LDEPSLLRFLRARDYDLNK----AEKLMN---SCLEWRRTFKPDEITAKELEDESSSGKLFQRGFDKNNRPIIYMFPARENST-DYEKNIKLLVYTMERAVDAMPEGVEQMTWIIDFNGYTTRNAPPFSVAKQ-----------------------------------TLSILNECYPERLGACFMVDTPFIFNIFWRAISPFINPVTKNKIHFVNGKESEKAKIFGKHIDLAQIDTTWGGTSTFVFE 261
[Close]
BLAST of jgi.p|Trimin1|353248 vs. uniprot
Match: A0A4P9XX99_9FUNG (CRAL-TRIO domain-containing protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XX99_9FUNG)

HSP 1 Score: 84.3 bits (207), Expect = 1.250e-14
Identity = 62/215 (28.84%), Postives = 92/215 (42.79%), Query Frame = 1 
Query:  364 LTELTLLRFLEVSYWRVEKDGDAGPRLVDVIARTVEWRDQMGAVAMAPAAVRAPAAAGKLYVRGADRQGRPVIHFRPAREHAPFDVAANTRLVVYTLERALRAMPPGQSRFAVVVDCAGFTLGNFPPVAYIKEEXXXXXXXXXXXXXXXXXXXXXXEARLAVTGALDASLGVMMNHYPMRLGYVRIVNAGRGLNFFWKIIASMLQERTTKKISFL 1008
            LT+  LLR+L  + W+V K  +        +  T+ WR +     + P  V   AA GK++V G DR GRPVI+  P RE+          L+ + LERA+ AMPPG  +  +++D  G +L N P     KE                                   +  ++  HYP RLG   IV A       +K+++  L   T  KI+F+
Sbjct:   52 LTDACLLRYLRAARWQVAKAAER-------LGNTLAWRRERRPHVLDPDYVMPEAATGKIFVNGFDRYGRPVIYLVPRRENTKPSRRQMDHLIFF-LERAIAAMPPGVEQVTLIIDFTGASLFNSPGAGVAKE-----------------------------------TANMLEQHYPERLGSAYIVGAPWFFGQVFKLVSPFLDTVTRDKINFV 223
[Close]
BLAST of jgi.p|Trimin1|353248 vs. uniprot
Match: W3VUR6_PSEA5 (CRAL-TRIO domain-containing protein n=3 Tax=Moesziomyces TaxID=63261 RepID=W3VUR6_PSEA5)

HSP 1 Score: 83.6 bits (205), Expect = 9.130e-14
Identity = 66/221 (29.86%), Postives = 96/221 (43.44%), Query Frame = 1 
Query:  454 IARTVEWRDQMGAVAMAPAAVRAPAAAGKLYVRGADRQGRPVIHFRPAREHAPFDVAANTRLVVYTLERALRAMPPGQSRFAVVVDCAGFTLGNFPPVAYIKEEXXXXXXXXXXXXXXXXXXXXXXEARLAVTGALDASLGVMMNHYPMRLGYVRIVNAGRGLNFFWKIIASMLQERTTKKISFLGGPATCDALLSE-LPPQALPDTICGTDTWTYDVDQY 1113
            I  T+EWR +     +APA++   A  GK  V G D+ GRP+I+ RPARE+         R +VYTLERA+  MP G   +A+V+D  G T  + P ++  +                                   A   ++ NHY  RLG   ++N    LN F+  I   L   T +KI F       +A L+E +P + L     G   + +D D Y
Sbjct:  112 IKSTLEWRREFRPEIIAPASIAHEAETGKQIVSGFDKDGRPLIYLRPARENTT-PSNDQVRYLVYTLERAIDLMPEGVENYAIVIDYRGATSQSNPSLSTAR-----------------------------------AVANILQNHYVERLGRAFVMNVPWFLNAFFTAITPFLDPITKEKIRF-------NANLAEFVPAEQLDVEFGGRYNYEWDFDVY 289
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353248 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z968_9STRA1.810e-247100.00CRAL-TRIO domain-containing protein n=1 Tax=Tribon... [more]
D7FQ39_ECTSI3.500e-4237.25CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JFY3_9PHAE1.230e-2134.88CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S0N4T9_9CRYP5.820e-1928.44Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A6A5C3G4_NAEFO4.400e-1627.82CRAL-TRIO domain-containing protein n=2 Tax=Naegle... [more]
L1IW21_GUITC1.710e-1526.07CRAL-TRIO domain-containing protein n=3 Tax=Guilla... [more]
A0A0L0HFP1_SPIPD3.800e-1529.96CRAL-TRIO domain-containing protein n=2 Tax=Spizel... [more]
D2V0F0_NAEGR1.110e-1426.61CRAL-TRIO domain-containing protein n=2 Tax=Naegle... [more]
A0A4P9XX99_9FUNG1.250e-1428.84CRAL-TRIO domain-containing protein n=1 Tax=Thamno... [more]
W3VUR6_PSEA59.130e-1429.86CRAL-TRIO domain-containing protein n=3 Tax=Moeszi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_152contigContig_152:121421..126110 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|353248|estExt_Genemark1.C_Ctg_1520021
Descriptionintermembrane phospholipid transfer
COG categoryE
Max annot lvl2759|Eukaryota
EggNOG OGsKOG1470@1|root,KOG1470@2759|Eukaryota
Evalue5.74e-43
Seed ortholog2880.D7FQ39
Hectar predicted targeting categorysignal peptide
TranscriptId353570
TrackFilteredModels1
ProteinId353248
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353248gene_15008Tribonema minus UTEX_B_3156 geneContig_152 121421..126110 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353248Trimin1|353248|estExt_Genemark1.C_Ctg_1520021Tribonema minus UTEX_B_3156 polypeptideContig_152 121421..126110 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_15008_8exon_15008_8Tribonema minus UTEX_B_3156 exonContig_152 121421..121585 -
exon_15008_7exon_15008_7Tribonema minus UTEX_B_3156 exonContig_152 122402..122491 -
exon_15008_6exon_15008_6Tribonema minus UTEX_B_3156 exonContig_152 122981..123049 -
exon_15008_5exon_15008_5Tribonema minus UTEX_B_3156 exonContig_152 123346..123381 -
exon_15008_4exon_15008_4Tribonema minus UTEX_B_3156 exonContig_152 123548..123746 -
exon_15008_3exon_15008_3Tribonema minus UTEX_B_3156 exonContig_152 124561..124766 -
exon_15008_2exon_15008_2Tribonema minus UTEX_B_3156 exonContig_152 125461..125632 -
exon_15008_1exon_15008_1Tribonema minus UTEX_B_3156 exonContig_152 125926..126110 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_15008CDS_15008Tribonema minus UTEX_B_3156 CDSContig_152 125926..126110 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_15008 ID=mRNA_15008|Name=jgi.p|Trimin1|353248|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1122bp|location=Sequence derived from alignment at Contig_152:121421..126110- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCCTGCTATACGGAGCCCTCATCACATTTATTCCTACCATCAAGAG
CTCCTTGCCAGCCCCCCTCACAGCTTTACTGTCGTCCCCCGTGCCCGATA
CTCCCGTGACGGAGCCGCCTGCCGAACGAACAGCTGCTGAGCCGCCTTCG
AAGCGCGACAGGAAACTGTGGAAGCTCAACTTCAGCGCCATGAAACGGAA
GCTGCTGGGGCGCAGCGCGAAAGCACCCGGCGCTGATGGGGGCGTCCTTT
TGTATGGGTACTACCAGATGAATGATCAGAAATGGGCGGCGCTGAGGCAG
CTGAAGGAGGAAGTCGATGCGCGGCCGGAGCTGAGACGGCACGCACGAGA
AGTCCAGCACGAGCTCACGGAGCTCACGCTGCTGCGCTTCCTGGAGGTCT
CGTACTGGCGTGTCGAAAAGGACGGGGACGCGGGGCCGCGACTCGTCGAC
GTCATTGCGCGCACGGTCGAGTGGCGCGATCAGATGGGCGCGGTGGCCAT
GGCGCCGGCCGCCGTGCGCGCGCCCGCTGCGGCGGGCAAGCTGTACGTGC
GCGGCGCGGACAGGCAGGGGCGGCCCGTCATCCACTTCCGCCCTGCGCGC
GAGCACGCGCCGTTCGACGTCGCCGCCAACACGCGCCTTGTGGTGTACAC
GCTGGAGCGCGCGCTGCGCGCCATGCCACCGGGGCAGAGCCGCTTCGCCG
TCGTCGTGGACTGCGCGGGGTTCACGCTCGGCAACTTCCCGCCGGTCGCG
TACATCAAGGAGGAAGGCAACTTCCCGCCGGTCGCGTACATGAAGGAGGA
AGGCAGCTTCCCGCCGGTTGCGTACATCAAGGAGGCGCGTCTCGCCGTCA
CGGGCGCCTTGGATGCATCCCTGGGGGTTATGATGAACCATTATCCCATG
CGCCTGGGGTACGTACGCATCGTCAACGCGGGCCGTGGGCTCAACTTCTT
CTGGAAGATCATCGCCAGCATGCTGCAGGAGCGCACGACCAAGAAAATCT
CCTTCCTGGGCGGCCCCGCCACGTGTGACGCGCTGCTCAGCGAGCTGCCG
CCGCAGGCGCTGCCGGACACCATCTGCGGCACCGACACGTGGACGTACGA
CGTGGATCAGTACCTGTTCTAG
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protein sequence of jgi.p|Trimin1|353248

>Trimin1|353248|estExt_Genemark1.C_Ctg_1520021 ID=Trimin1|353248|estExt_Genemark1.C_Ctg_1520021|Name=jgi.p|Trimin1|353248|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=374bp
MGLLYGALITFIPTIKSSLPAPLTALLSSPVPDTPVTEPPAERTAAEPPS
KRDRKLWKLNFSAMKRKLLGRSAKAPGADGGVLLYGYYQMNDQKWAALRQ
LKEEVDARPELRRHAREVQHELTELTLLRFLEVSYWRVEKDGDAGPRLVD
VIARTVEWRDQMGAVAMAPAAVRAPAAAGKLYVRGADRQGRPVIHFRPAR
EHAPFDVAANTRLVVYTLERALRAMPPGQSRFAVVVDCAGFTLGNFPPVA
YIKEEGNFPPVAYMKEEGSFPPVAYIKEARLAVTGALDASLGVMMNHYPM
RLGYVRIVNAGRGLNFFWKIIASMLQERTTKKISFLGGPATCDALLSELP
PQALPDTICGTDTWTYDVDQYLF*
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mRNA from alignment at Contig_152:121421..126110-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_15008 ID=mRNA_15008|Name=jgi.p|Trimin1|353248|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4690bp|location=Sequence derived from alignment at Contig_152:121421..126110- (Tribonema minus UTEX_B_3156 )
ATGGGCCTGCTATACGGAGCCCTCATCACATTTATTCCTACCATCAAGAG
CTCCTTGCCAGCCCCCCTCACAGCTTTACTGTCGTCCCCCGTGCCCGATA
CTCCCGTGACGGAGCCGCCTGCCGAACGAACAGCTGCTGAGCCGCCTTCG
AAGCGCGACAGGAAACTGTGGAAGCTCAACTTCAGGTGAGCATGTGTGAG
AGCCAATCCGTGCCGCAGACACTGTTTTGACACGAGTTGCACATCCTGCT
TTGCTGCTTGTTGCACTCCCTGCTGTGCTGCATCGCGGACTGCGGCGTAC
AGCGAGCGCAGCGAGCTGATGTCATGCGCCTCTTGCTGCGAGACACACCG
CACTTGCCCACAAAGGCACGCCACACACACCTCGATGATGTCCCCTTTGC
CGCACACCAACAACCTACAGTCAAGCCCGTGACATCGCACTGCGCACTGC
CGCTGTCGCCGCTGCCGTCTTCGCGCAGCGCCATGAAACGGAAGCTGCTG
GGGCGCAGCGCGAAAGCACCCGGCGCTGATGGGGGCGTCCTTTTGTATGG
GTACTACCAGATGAATGATCAGAAATGGGCGGCGCTGAGGCAGCTGAAGG
AGGAAGTCGATGCGCGGCCGGAGCTGAGACGGCACGCACGAGAAGTCCAG
GTCAGTTCTCCAGGTTCTGCAGCACGCGCTCTCATCGGTCCACTGCCTTG
CTGTCTTCGGAGTACAGCATACTCGGGGATGGGTTAGGCAGCATGTGTGC
GAGTGGTTGGACATCGTTATAGAAACTGTAGAAAGGGATAGCGGGTGTGT
GCGTGTGCGCCCAGCCGCACTGAAGCGGGGGCTCTCATGTGCGGCGAGTG
AGGGGCAAGTGGAACAGACCTCCCCCAGTGCATCCAACAGTGTCCTCCTG
CGGTGTGGCTGTTGCCAAGTGCGCGCGTTACAGCCACTTCAACATTGCAT
AGGCAACTTCAACCGACATGCCGCGTGCTATCGCACCAGGTACCCAGCGT
TGAACCACTGATTTACCTTCGCGTGCGCGCCATGCCTTGACTCAAGGTGT
CCTCCGTTCAGTATGCTTGAAAGTGCTCGCGGTGGCGAGAACTGCAGTTC
ACAGGTGTTTCCTTCGAGACACGGGCGACCGCGCCTGGCAGTGCACCCTT
GCAAAGCAACAGCCGCAGCTTCCGCAGCGCGCAGCGCCAGCATTCCTGGA
ACCGAAGTGAACTCTGGTGGCGGTGACGCCACTAAAGTTGATGTTGACAA
TGAGGACGGATCAAGGCACGCACGCAATCAGTATCTCACCAATGACGATG
ACACAACCCCTCCCCCCTGCCCCCCTCTCCCCCCCCCGACGCAGCACGAG
CTCACGGAGCTCACGCTGCTGCGCTTCCTGGAGGTCTCGTACTGGCGTGT
CGAAAAGGACGGGGACGCGGGGCCGCGACTCGTCGACGTCATTGCGCGCA
CGGTCGAGTGGCGCGATCAGATGGGCGCGGTGGCCATGGCGCCGGCCGCC
GTGCGCGCGCCCGCTGCGGCGGGCAAGCTGTACGTGCGCGGCGCGGACAG
GTGCGCTAGCGGCGGCGGCGACAGCGGCGCTGTGTCGTTGGGCGGAACTC
TGCTGTGCTTGTGTTTTGCTGCCTAGGGCATGGCGGCGGCGGCGGCGCTG
CGGCGTCGGGCCGAGCGCTGCTGTGCTCGTGTCGTGCTGCCTAGGGCATG
TGGGCGTGTACGTGCTGTATGAAGCCTTACGCTTTCTGATGTTAGGGCTC
GGATTAGGGTCAGGCGAACCGTAACCTAAACCGCTTGGGCCATCTCGCGC
GCGCGCCGCTGCTCGATGCTGCCGCTTAACGACGCGCGCGCAGCGGTGCG
CCGCCGGAGGCACAGAGCGCGGCGCTTGACAGGGCACACTCTGCCCTGAG
GAGTCGGTAGCAGGCACGCTGGCGGGCAGTTGCGCACCCGAGATCACGGA
TGCGAGATGGTGATATTCACAGCAGGCGACACGCAGTGCAGCAGTGCCAG
TGCTCAGCAACAACACTTCAACGATGGACGTGGAGTCAGCAGTGCCCCCC
CCTGCCGTCCATAGGCAGGCGGGCGTGTGTAAACCTGCTGTCCGGTGACC
CTCGCCAGCGCAAGCGCGCGCCGTTGCTGCTCCCGGTATTTCAGCAGAGC
GCCATTGATGCACCTGGTATTTCAGCAGAGCTCCAGTACGGCAGCACGAG
CACGCGCCAAGCAGCACACCGCGTCACAACTCAACACTCGCGACACTTCC
CCCCCCCCCCCCCCCTCCCCACAACTCCCCACCCACAACACCTCCCCCCA
TACTCCACACTCACCCCCCCCCCCCCCCCGGCCCCGCCTCCCCCTCGTCG
ACGCGCGCGCGCAGGCAGGGGCGGCCCGTCATCCACTTCCGCCCTGCGCG
CGAGCACGCGCCGTTCGACGTCGCCGCCAACACGCGCCTTGTGGTGTACA
CGCTGGAGCGCGCGCTGCGCGCCATGCCACCGGGGCAGAGCCGCTTCGCC
GTCGTCGTGGACTGCGCGGGGTTCACGCTCGGCAACTTCCCGCCGGTCGC
GTACATCAAGGAGGTGCGTCTGGCCGCGGCGGTGATTGGAGTGTGCCAAA
CGGCGTGTCCTGCATGCGGTCGGTCGAGCTGCAGGAGTGCGGAGCACGGT
GCATCAGCCGTGCCGCTGCGGGCTCTCGTGCGCTGTTTGCTTCGTGCGCT
GTGGTCACGCTTGACGCTGCGTGCACCAGGAAGGCAACTTCCCGCCGGTC
GCGTACATGAAGGAGGTGCGTCTGGCCGCGGCGGCGCGGCGGTGACTGGA
CCGTGTCCGTGCCTTTGTCATGCGTGTCGCCATCAGGGGCGCCTTTGGTG
CAGTCTGCCGACCTGCAAGAGTGGTGCGCTGCGGAGGCGGCCTAGGTCAT
TGGGTGCGGCGCGGGCGCGTGTGCTGCGGCGGTGGCTGGAACGTGTGTTG
TGTCCTTGTCATGCGGTCGGCCCAGCTGCAAGAAAGCGGTGCGCAGGTGC
ACCAGCCGCGCTGCTGCGGGCGCTCGTGCGCTGTGGTCACGCTTGACGCT
GCGTGCACCAGGAAGGCAGCTTCCCGCCGGTTGCGTACATCAAGGAGGCG
CGTCTCGCCGTCACGGGCGCCTTGGATGCAGTCCGCCCTGCACCTGCAAA
AATGGTCGAACCTAGTTTGGAAGCGGCGTAGCTCATTGAGTGCGGCGCTG
GGGGCGGCGCGGGTGCGTGTGCTGCTGCAGTCGCGCTTTCATTCGGCGCG
CGCCTTGGAGATGCATGCGCGTGTCTCAGCGGCAGGCGCCGTAGAATTAC
AGCACCCTCGACTGATTGAACATTGCCATCCTCGAGCGCAGCAGGACGCC
GCCGTGGAGCCGCCTTGCTGCTGAGCGTTGCCGCTGCTGCTGCTGCGCCC
TGATGCGCTGCTCCTTTTGATACACACCCTGTCATCGTGGCGCAACTCAC
GGCGCGATTTTAGCGTGCGACGCGTGCACGGTGCATACAGCCCCGTAGGC
GAGGCCTCAGACACAGCACCACGCAGCAGATTATCAAAAAGTATGCATCA
CCTTGCACTTGACGGCATATCCCCACTCATTCAGCAGTGCTGCTGCCGCA
CGCTTTTTGCGTTCCGCAGTCCCTGGGGGTTATGATGAACCATTATCCCA
TGCGCCTGGGGTACGTACGCATCGTCAACGCGGGCCGTGGGCTCAACTTC
TTCTGGAAGGTGCGTCACTGTTGAACATGCAGCACATGCCTGCGAAGCCT
CTGAAGAGTCTGCAAACCTTCAGATTCACCAAGAGTATGGTTTGTTTTCA
CACTTCTGGCAGCGCCTGTCTTTGCGCTCTCGGGCTTGGTGGATCTGCTG
CAGCCCTTTCGCAGCAGCTGCGCCCTCAACGTCAGTTTCGTGTGCATGGC
GACCACTCATCGTCATGTTCATGTATGCAGTGTCTCGGTATGGTGCGCCC
AGTTGCAGCCGCTCTGCTGCTACATGTAGCACGGCTCGTGCCACAAGCCG
CGCAGCATCGCATCGAGCGCCACTTCAATTCCTCCCATCTCAGCTGCTGC
CCCATCGCCAGTGCGCTCGACAGCGCCCCATCGGCGATGCCTGCTGCGGT
CGCGGGCTTCCCATGCACAATCGCAGCGTCAGAGAGCGCGTGGCCACTTT
GGCGTTGCAAGCGCTGGTATACCACTCCATGGCTGTGGCCAGCACGGTGC
TCAAGCGCAGTGCCGGCACAGCAGCGTGACCGTCCTGCTCGTCCGTTTGA
TGCAGCGCTCAGCAACATCTGGCCGGCGCAGCATCAATGCGTCAAAGACG
AACTTGAGTCCTTCTTGGACAGGCTTGGGCCGGCGGGAGGAAGCTGCTGA
AGCTGCTGAAGCTGCTGCCGCCGCTGCAGCTGCCAGTGCCGCTGCTGCTA
CACCATGAAGCACAGAGCCATGCACTATGGTGCCTAACTACAGCCTTGTG
GCACGCATGTATACGCAGACAAGAGACGCCGCTGACCTCCCCATCCCCCC
GCTGCCGCCGACGCCGCTGCCGCAGATCATCGCCAGCATGCTGCAGGAGC
GCACGACCAAGAAAATCTCCTTCCTGGGCGGCCCCGCCACGTGTGACGCG
CTGCTCAGCGAGCTGCCGCCGCAGGCGCTGCCGGACACCATCTGCGGCAC
CGACACGTGGACGTACGACGTGGATCAGTACCTGTTCTAG
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Coding sequence (CDS) from alignment at Contig_152:121421..126110-

>mRNA_15008 ID=mRNA_15008|Name=jgi.p|Trimin1|353248|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1122bp|location=Sequence derived from alignment at Contig_152:121421..126110- (Tribonema minus UTEX_B_3156 )
ATGGGCCTGCTATACGGAGCCCTCATCACATTTATTCCTACCATCAAGAG
CTCCTTGCCAGCCCCCCTCACAGCTTTACTGTCGTCCCCCGTGCCCGATA
CTCCCGTGACGGAGCCGCCTGCCGAACGAACAGCTGCTGAGCCGCCTTCG
AAGCGCGACAGGAAACTGTGGAAGCTCAACTTCAGCGCCATGAAACGGAA
GCTGCTGGGGCGCAGCGCGAAAGCACCCGGCGCTGATGGGGGCGTCCTTT
TGTATGGGTACTACCAGATGAATGATCAGAAATGGGCGGCGCTGAGGCAG
CTGAAGGAGGAAGTCGATGCGCGGCCGGAGCTGAGACGGCACGCACGAGA
AGTCCAGCACGAGCTCACGGAGCTCACGCTGCTGCGCTTCCTGGAGGTCT
CGTACTGGCGTGTCGAAAAGGACGGGGACGCGGGGCCGCGACTCGTCGAC
GTCATTGCGCGCACGGTCGAGTGGCGCGATCAGATGGGCGCGGTGGCCAT
GGCGCCGGCCGCCGTGCGCGCGCCCGCTGCGGCGGGCAAGCTGTACGTGC
GCGGCGCGGACAGGCAGGGGCGGCCCGTCATCCACTTCCGCCCTGCGCGC
GAGCACGCGCCGTTCGACGTCGCCGCCAACACGCGCCTTGTGGTGTACAC
GCTGGAGCGCGCGCTGCGCGCCATGCCACCGGGGCAGAGCCGCTTCGCCG
TCGTCGTGGACTGCGCGGGGTTCACGCTCGGCAACTTCCCGCCGGTCGCG
TACATCAAGGAGGAAGGCAACTTCCCGCCGGTCGCGTACATGAAGGAGGA
AGGCAGCTTCCCGCCGGTTGCGTACATCAAGGAGGCGCGTCTCGCCGTCA
CGGGCGCCTTGGATGCATCCCTGGGGGTTATGATGAACCATTATCCCATG
CGCCTGGGGTACGTACGCATCGTCAACGCGGGCCGTGGGCTCAACTTCTT
CTGGAAGATCATCGCCAGCATGCTGCAGGAGCGCACGACCAAGAAAATCT
CCTTCCTGGGCGGCCCCGCCACGTGTGACGCGCTGCTCAGCGAGCTGCCG
CCGCAGGCGCTGCCGGACACCATCTGCGGCACCGACACGTGGACGTACGA
CGTGGATCAGTACCTGTTCTAG
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