mRNA_14920 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|339741
Unique NamemRNA_14920
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|339741 vs. uniprot
Match: A0A835YI75_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI75_9STRA)

HSP 1 Score: 802 bits (2072), Expect = 2.940e-293
Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 1
Query:    1 MSRDTQALLHALAEQSSQGSYNLAQRVAFWRRRTSLALQRALTRVVIDNWNAVIAPDGDRDESGAWKIARVPGMVVPLDSTPGDPTAVTLSCNDVGTLAIFYRRRRTRSAVDVDSERTNAGILAAVHESVRAVLWAQRLSSRRRVGHWHTFGPRWPDSKPDWGSDANSRERCADLSRLLLALRPELSCFDVRTRGAFALSGGAELVCSYQFHLQRTGPGAQIPRGLRAAHATFKFTRCGRRRPEIDYAGLAEGLLNAPAPKLAGEACVWVLQRVALPARGDTRILEAIAAAMAVRHARRLDGDWPPAGVAVELASIARVRDPVGYGASFGMVEVPTGTHGCWLFHTPEGEGDPRAHELHVNRWQGGHWNVEFSSLGACRNCDSENEXXXXXXXXXXXXXXEDVEDGP 1221
            MSRDTQALLHALAEQSSQGSYNLAQRVAFWRRRTSLALQRALTRVVIDNWNAVIAPDGDRDESGAWKIARVPGMVVPLDSTPGDPTAVTLSCNDVGTLAIFYRRRRTRSAVDVDSERTNAGILAAVHESVRAVLWAQRLSSRRRVGHWHTFGPRWPDSKPDWGSDANSRERCADLSRLLLALRPELSCFDVRTRGAFALSGGAELVCSYQFHLQRTGPGAQIPRGLRAAHATFKFTRCGRRRPEIDYAGLAEGLLNAPAPKLAGEACVWVLQRVALPARGDTRILEAIAAAMAVRHARRLDGDWPPAGVAVELASIARVRDPVGYGASFGMVEVPTGTHGCWLFHTPEGEGDPRAHELHVNRWQGGHWNVEFSSLGACRNCDSENEXXXXXXXXXXXXXXEDVEDGP
Sbjct:    1 MSRDTQALLHALAEQSSQGSYNLAQRVAFWRRRTSLALQRALTRVVIDNWNAVIAPDGDRDESGAWKIARVPGMVVPLDSTPGDPTAVTLSCNDVGTLAIFYRRRRTRSAVDVDSERTNAGILAAVHESVRAVLWAQRLSSRRRVGHWHTFGPRWPDSKPDWGSDANSRERCADLSRLLLALRPELSCFDVRTRGAFALSGGAELVCSYQFHLQRTGPGAQIPRGLRAAHATFKFTRCGRRRPEIDYAGLAEGLLNAPAPKLAGEACVWVLQRVALPARGDTRILEAIAAAMAVRHARRLDGDWPPAGVAVELASIARVRDPVGYGASFGMVEVPTGTHGCWLFHTPEGEGDPRAHELHVNRWQGGHWNVEFSSLGACRNCDSENEXXXXXXXXXXXXXXEDVEDGP 407          
BLAST of jgi.p|Trimin1|339741 vs. uniprot
Match: A0A836C6X9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6X9_9STRA)

HSP 1 Score: 493 bits (1268), Expect = 5.250e-172
Identity = 255/315 (80.95%), Postives = 265/315 (84.13%), Query Frame = 1
Query:  220 MVVPLDSTPGDPTAVTLSCNDVGTLAIFYRRRRTRSAVDVDSERTNAGILAAVHESVRAVLWAQRLSSRRRVGHWHTFGPRWPDSKPDWGSDANSRERCADLSRLLLALRPELSCFDVRTRGAFALSGGAELVCSYQFHLQRTGP--GAQIPRGLRAAHATFKFTRCGRRRPEIDYAGLAEGLLNAPAPKLAGEACVWVLQRVALPARGDTRILEAIAAAMAVRHARRLDGDWPPAGVAVELASIARVRDPVGYGASFGMVEVPTGTHGCWLFHTPEGEGDPRAHELHVNRWQGGHWNVEFSSLGACRNCDSENE 1158
            MVVPLDSTPGDPTAVTLS +DVG LAIFYRRRRTR AVDVDSER +AG+LAAVHESVRAVLWAQRLSSR RVGHW  FGP WPDS+PD  +DANSRERCA LSRLLLALRPELSCF VRTRGA ALSGGAELVC   FHLQ TG    A IPRGLRAA+ATF+FT  GRRRPEIDYAGLA+GL NAPA + AG A VWVL+RVALPARGDTRILEAIAAAMA R ARR DGDWPPAGVAVELASIA VRDPVGYG S GMV VPTGTHG WLF TPEG     A ELHV RWQ G WNVEFSS GA  NCDSENE
Sbjct:    1 MVVPLDSTPGDPTAVTLSPDDVGMLAIFYRRRRTRRAVDVDSERADAGMLAAVHESVRAVLWAQRLSSRGRVGHWPHFGPPWPDSEPDEWTDANSRERCAALSRLLLALRPELSCFQVRTRGALALSGGAELVCLDHFHLQCTGGRGAAAIPRGLRAANATFEFTHRGRRRPEIDYAGLADGLRNAPASEHAGVASVWVLRRVALPARGDTRILEAIAAAMAARRARRSDGDWPPAGVAVELASIAPVRDPVGYGVSLGMVRVPTGTHGFWLFRTPEGG---EAIELHVTRWQNGRWNVEFSSAGAASNCDSENE 312          
BLAST of jgi.p|Trimin1|339741 vs. uniprot
Match: A0A835YJY8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJY8_9STRA)

HSP 1 Score: 326 bits (836), Expect = 2.540e-106
Identity = 184/319 (57.68%), Postives = 201/319 (63.01%), Query Frame = 1
Query:  175 DRDESGAWKIARVPGMVVPLDSTPGDPTAVTLSCNDVGTLAIFYRRRRTRSAVDVDSERTNAGILAAVHESVRAVLWAQRLSSRRRVGHWHTFGPRWPDSKPDWGSDANSRERCADLSRLLLALRPELSCFDVRTRGAFALSGGAELVCSYQFHLQRTGPGAQIPRGLRAAHATFKFTRCGRRRPEIDYAGLAEGLLNAPAPKLAGEACVWVLQRVALPARGDTRILEAIAAAMAVRHARRLDGDWPPAGVAVELASIARVRDPVGYGASFGMVEVPTGTHGCWLFHTPEGEGDPRAHELHVNRWQGGHWNVEFSSLGA 1131
            +RD SGAW+IARV GM+VPLDSTPGD TAVTLS +DVG L +FYRRRRTR AVDVDS   NAGILAAVHES RAVLWAQ+LSSR R   WH FGP WPDS  +   DA+S ERCA LS LLLALRPELS F+VRT  A AL GGAEL    +  L+R   GA                                    AP  + AGEA VW LQ V  PA GD RILE IAA MA R A R D DW P GV VEL     VRDPVGY ASFGM+E   G +  W F TP    DPRA EL V RW+ G WN++FSSLGA
Sbjct:   48 ERDVSGAWRIARVSGMIVPLDSTPGDLTAVTLSADDVGILGVFYRRRRTRRAVDVDSNNANAGILAAVHESARAVLWAQQLSSRERAACWHKFGPPWPDSGINLCMDADSHERCAFLSLLLLALRPELSRFEVRTNRALALFGGAELAA--RDRLRRPRGGA------------------------------------APESERAGEASVWALQHVDPPAPGDGRILEVIAAVMAARRAGRSDSDWQPLGVVVELRYRGPVRDPVGYAASFGMIEARMGMYDYWHFRTPA--QDPRAIELRVTRWEFGSWNIQFSSLGA 326          
BLAST of jgi.p|Trimin1|339741 vs. uniprot
Match: A0A836CCW5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCW5_9STRA)

HSP 1 Score: 194 bits (494), Expect = 2.080e-52
Identity = 156/410 (38.05%), Postives = 190/410 (46.34%), Query Frame = 1
Query:   91 RRRTSLALQRALTRVVIDNWNAVIAPDGDRDESGAWKIARVPGMVVPLDSTPGDPTAVTLSCNDVGTLAIFYRRRRTRSAVDV----------DSERTNAGILAAVHESVRAVLWAQRLSSRRRVGHWHTFGPRWPDSKPDWGS--------DANSRERCADLSRLLLALRPELSCFDVR---TRGAFALSGGAELVCSYQFHL-----QRTGPGAQIPRGLRAAHATFKFTRCGRRRPEIDYAGLAEGLLNAP--APKLAGEACVWVLQRVALPARGDTRILEAIAAAMAVRHARRLDGD--WPPAGVAVELASIARVRDPVGYGASFGMV-EVPTGTHGCWLFHTP-----------EGEGDPRAHELHVNRWQGGHWNVEFSSLGA------------CRNCDSENE 1158
            RRR   A QRA+T  +     AV    GDR     +++ R+PG  VPLD+TP DP  VT++ +D+  L  FY  R  R A DV          D    +AG+LAAVH SVRAVLWA R     R G    FG RW + +P   +        D +S ER A LS LL ALRP L  F  R   +  A  L  GA L C+  F +        G  A +PRG                   +DY  LAEGL  AP   P  +     W L+  A P  GD RIL AIAAAMA R ARRL G   W P G+ VE  ++  V DP GYG SFG   E  TG    W F  P           EGE D    E+ + RW  G W V+F S+ A            C + DSE++
Sbjct:  238 RRRELRASQRAVTPPL----TAVRDDSGDRCP---YRLPRLPGFAVPLDATPDDPAVVTVAVDDLRLLLAFYGGRTVRRAADVAARARADGDADGADGDAGLLAAVHSSVRAVLWATRGGRALRPGDRPGFG-RWLEYRPARAALSRAPLHVDVDSPERRAGLSLLLRALRPRLGRFGCRAGESAAADLLRDGARLTCNGHFTMTIRVGDAGGGRAVVPRG-------------------VDYESLAEGLAAAPDPVPPPSDLDTAWALEGAAPPEAGDGRILRAIAAAMAERRARRLAGTRKWTP-GIVVEFVNVPPVADPTGYGTSFGAAREQFTGRQDHWFFRAPSRDDDGARDRDEGEPDGGRAEILITRWHDGVWTVQFVSVAADGDEDRYHERTDCSDSDSESD 619          
BLAST of jgi.p|Trimin1|339741 vs. uniprot
Match: A0A835ZHJ0_9STRA (Subtilisin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHJ0_9STRA)

HSP 1 Score: 119 bits (297), Expect = 9.810e-27
Identity = 71/122 (58.20%), Postives = 81/122 (66.39%), Query Frame = 1
Query:    1 MSRDTQALLHALAEQSSQGSYNLAQRVAFWRRRTSLALQRALTRVVIDNWNAVIAPDGDRDESGAWKIARVPGMVVPLDSTPGDPTAVTLSCNDVGTLAIFYRRRRTRSAVDVDSERTNAGI 366
            MSRDTQALLHALAEQSSQ SYNLAQRVAFWRRRTSLALQRALTRVVIDNWNAVIAPDGD        +++VP         P  P    ++  D      F R +  R+A++ D    NAG+
Sbjct:    1 MSRDTQALLHALAEQSSQSSYNLAQRVAFWRRRTSLALQRALTRVVIDNWNAVIAPDGDVSAYRCIALSQVPRPSPASAKPPAPPELSVVNEPD------FRRLQWGRTAINAD-RAFNAGV 115          
BLAST of jgi.p|Trimin1|339741 vs. uniprot
Match: A0A835ZEG1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEG1_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.970e-26
Identity = 61/72 (84.72%), Postives = 63/72 (87.50%), Query Frame = 1
Query:    1 MSRDTQALLHALAEQSSQGSYNLAQRVAFWRRRTSLALQRALTRVVIDNWNAVIAPDGDRDESGAWKIARVP 216
            MSRDTQALLHALAEQSSQGSYNLAQRVAFWRRRTSLALQRALTRVVIDNWNAVIAPDGD        + +VP
Sbjct:  167 MSRDTQALLHALAEQSSQGSYNLAQRVAFWRRRTSLALQRALTRVVIDNWNAVIAPDGDVSAYRRIALLQVP 238          
BLAST of jgi.p|Trimin1|339741 vs. uniprot
Match: A0A835YMN2_9STRA (Polycystin cation channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMN2_9STRA)

HSP 1 Score: 118 bits (296), Expect = 4.380e-25
Identity = 74/134 (55.22%), Postives = 83/134 (61.94%), Query Frame = 1
Query:    1 MSRDTQALLHALAEQSSQGSYNLAQRVAFWRRRTSLALQRALTRVVIDNWNAVIAPDGDRDESGAWKIARVPGMVVPLDSTPGDPTAVTLSCNDVGTLAIFYRRRRTRSAVDVDSER---TNAGILAAVHESVR 393
            MSRDTQALLHALAEQSSQGSYNLAQRVAFWRRRTSLALQRALTRVVIDNWNAVIAPDGD        + +VP         P  P ++      VG  A   R   T+     D  R   T++G   A   +V+
Sbjct:  161 MSRDTQALLHALAEQSSQGSYNLAQRVAFWRRRTSLALQRALTRVVIDNWNAVIAPDGDVSAYRRIALLQVPRPSPASAEPPAPPASMQRMMAAVGAQA---RNLATKVGQGADEARKLVTDSGDEVARRHNVK 291          
BLAST of jgi.p|Trimin1|339741 vs. uniprot
Match: A0A835ZH42_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH42_9STRA)

HSP 1 Score: 116 bits (290), Expect = 7.430e-25
Identity = 61/72 (84.72%), Postives = 63/72 (87.50%), Query Frame = 1
Query:    1 MSRDTQALLHALAEQSSQGSYNLAQRVAFWRRRTSLALQRALTRVVIDNWNAVIAPDGDRDESGAWKIARVP 216
            MSRDTQALLHALAEQSSQGSYNLAQRVAFWRRRTSLALQRALTRVVIDNWNAVIAPDGD        + +VP
Sbjct:  394 MSRDTQALLHALAEQSSQGSYNLAQRVAFWRRRTSLALQRALTRVVIDNWNAVIAPDGDVSAYRRIALLQVP 465          
BLAST of jgi.p|Trimin1|339741 vs. uniprot
Match: A0A835Z6X8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6X8_9STRA)

HSP 1 Score: 109 bits (272), Expect = 8.870e-25
Identity = 61/85 (71.76%), Postives = 64/85 (75.29%), Query Frame = 1
Query:    1 MSRDTQALLHALAEQSSQGSYNLAQRVAFWRRRTSLALQRALTRVVIDNWNAVIAPDGDRDESGAWKIARVPGMVVPLDSTPGDP 255
            MSRDTQALLHALAEQSSQGSYNL QRVAFWRRRTSLALQRALTRVVIDNWNA IAP GD        + +VP    P  + P  P
Sbjct:   84 MSRDTQALLHALAEQSSQGSYNLTQRVAFWRRRTSLALQRALTRVVIDNWNAGIAPAGDVSAYRRIALLQVP-RPSPASAEPPPP 167          
BLAST of jgi.p|Trimin1|339741 vs. uniprot
Match: A0A835Z3E8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3E8_9STRA)

HSP 1 Score: 110 bits (276), Expect = 9.620e-25
Identity = 57/59 (96.61%), Postives = 57/59 (96.61%), Query Frame = 1
Query:    1 MSRDTQALLHALAEQSSQGSYNLAQRVAFWRRRTSLALQRALTRVVIDNWNAVIAPDGD 177
            MSRDTQALLHALAEQSSQGSYNLAQRVAFWR RTSL LQRALTRVVIDNWNAVIAPDGD
Sbjct:   56 MSRDTQALLHALAEQSSQGSYNLAQRVAFWRCRTSLTLQRALTRVVIDNWNAVIAPDGD 114          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|339741 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YI75_9STRA2.940e-293100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C6X9_9STRA5.250e-17280.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YJY8_9STRA2.540e-10657.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CCW5_9STRA2.080e-5238.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZHJ0_9STRA9.810e-2758.20Subtilisin n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A835ZEG1_9STRA1.970e-2684.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YMN2_9STRA4.380e-2555.22Polycystin cation channel-domain-containing protei... [more]
A0A835ZH42_9STRA7.430e-2584.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z6X8_9STRA8.870e-2571.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z3E8_9STRA9.620e-2596.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_98contigContig_98:390730..392743 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|339741|MIX48504_3_28
Hectar predicted targeting categoryother localisation
TranscriptId340063
TrackFilteredModels1
ProteinId339741
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|339741gene_14920Tribonema minus UTEX_B_3156 geneContig_98 390730..392743 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_14920_1exon_14920_1Tribonema minus UTEX_B_3156 exonContig_98 390730..390906 +
exon_14920_2exon_14920_2Tribonema minus UTEX_B_3156 exonContig_98 391697..392743 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_14920CDS_14920Tribonema minus UTEX_B_3156 CDSContig_98 390730..390906 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|339741Trimin1|339741|MIX48504_3_28Tribonema minus UTEX_B_3156 polypeptideContig_98 390730..392743 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_14920 ID=mRNA_14920|Name=jgi.p|Trimin1|339741|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1224bp|location=Sequence derived from alignment at Contig_98:390730..392743+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTCACGCGACACCCAAGCGCTGCTACACGCACTCGCCGAGCAGAGCTC
GCAGGGCAGCTACAATCTCGCGCAGCGCGTTGCCTTCTGGCGCCGCCGCA
CCTCCCTCGCGCTACAGCGCGCGCTCACACGTGTCGTGATCGACAACTGG
AACGCAGTCATTGCCCCTGATGGCGACCGCGACGAGAGCGGTGCATGGAA
GATAGCGAGGGTGCCGGGGATGGTAGTCCCGCTGGACTCGACGCCCGGCG
ACCCTACCGCTGTCACCTTGTCCTGCAACGACGTCGGGACGCTGGCCATC
TTCTACAGGCGGAGGAGGACGAGGAGCGCGGTCGACGTGGATTCGGAGAG
GACCAATGCGGGGATTCTGGCGGCGGTCCACGAGTCCGTCAGGGCTGTTC
TGTGGGCGCAACGGCTCAGCTCCCGCAGGAGGGTCGGGCACTGGCACACC
TTCGGCCCGCGGTGGCCTGACAGCAAACCTGACTGGGGGAGTGACGCTAA
CTCGCGCGAGCGCTGCGCCGATCTGAGCCGCCTGCTGCTCGCGCTGCGCC
CTGAGCTCAGCTGTTTTGACGTCCGCACGCGCGGCGCCTTCGCGCTCTCC
GGCGGCGCCGAGCTGGTCTGCTCGTACCAGTTTCACCTGCAGCGCACGGG
CCCCGGGGCGCAGATACCGCGCGGCCTGCGCGCCGCGCATGCGACGTTCA
AGTTCACGCGCTGCGGGCGCCGTCGGCCCGAGATAGACTATGCAGGGCTC
GCGGAGGGGCTGCTCAACGCCCCGGCGCCCAAACTCGCGGGAGAGGCGTG
CGTCTGGGTGCTGCAGCGCGTCGCTCTTCCTGCGCGTGGCGACACGAGGA
TCCTGGAGGCGATAGCGGCCGCGATGGCGGTGCGCCACGCGCGCCGGTTG
GACGGCGATTGGCCGCCCGCAGGCGTGGCGGTCGAGCTGGCGAGCATTGC
GCGTGTGCGGGACCCTGTGGGCTACGGCGCGTCGTTCGGCATGGTTGAGG
TGCCGACGGGAACGCACGGGTGCTGGCTTTTCCACACGCCCGAGGGGGAA
GGGGACCCGCGCGCTCACGAGCTCCACGTCAACCGCTGGCAGGGCGGGCA
CTGGAACGTGGAGTTCTCCTCCCTCGGCGCGTGCCGCAACTGCGACAGCG
AGAACGAGAGCGCCAGCGGGAGCGGCGCGAGCGGGAGCGAGAGCGATGAC
GAGGACGTAGAGGACGGCCCTTAG
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protein sequence of jgi.p|Trimin1|339741

>Trimin1|339741|MIX48504_3_28 ID=Trimin1|339741|MIX48504_3_28|Name=jgi.p|Trimin1|339741|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=408bp
MSRDTQALLHALAEQSSQGSYNLAQRVAFWRRRTSLALQRALTRVVIDNW
NAVIAPDGDRDESGAWKIARVPGMVVPLDSTPGDPTAVTLSCNDVGTLAI
FYRRRRTRSAVDVDSERTNAGILAAVHESVRAVLWAQRLSSRRRVGHWHT
FGPRWPDSKPDWGSDANSRERCADLSRLLLALRPELSCFDVRTRGAFALS
GGAELVCSYQFHLQRTGPGAQIPRGLRAAHATFKFTRCGRRRPEIDYAGL
AEGLLNAPAPKLAGEACVWVLQRVALPARGDTRILEAIAAAMAVRHARRL
DGDWPPAGVAVELASIARVRDPVGYGASFGMVEVPTGTHGCWLFHTPEGE
GDPRAHELHVNRWQGGHWNVEFSSLGACRNCDSENESASGSGASGSESDD
EDVEDGP*
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mRNA from alignment at Contig_98:390730..392743+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_14920 ID=mRNA_14920|Name=jgi.p|Trimin1|339741|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2014bp|location=Sequence derived from alignment at Contig_98:390730..392743+ (Tribonema minus UTEX_B_3156 )
ATGTCACGCGACACCCAAGCGCTGCTACACGCACTCGCCGAGCAGAGCTC GCAGGGCAGCTACAATCTCGCGCAGCGCGTTGCCTTCTGGCGCCGCCGCA CCTCCCTCGCGCTACAGCGCGCGCTCACACGTGTCGTGATCGACAACTGG AACGCAGTCATTGCCCCTGATGGCGACGTCAGCGCTTACCGCCGCATCGC ACTGTTGCAAGTGCCGCGGCCCTCGCCGGCCAGCGCCGAACCGCCGGCTC CTCCGTAGATTTAGTTATTGCAAGCCCGATTTATCGTGCGCGCAGCCCAT GCGGTCCAGGACATAATATACAACTTCAACTTTGAAAAGGGCGCCAAAAC CTCAACGAGAATAAGGGCGCGCTCACAGTGCCTCACACACCTGTACAGCT GCAGAGAGGGCTAGCGCATCTGTCAAACCTTGTAGATACACACAAGGTCA AACTCTGCCGGGTGGGTCGCTGCTGATCACAGGGCGGTCGCTGCCGATCA CACAGAGCTAGCACCCTGCGGAGCAAAGCAGCAGTAGCAGCTGAAAGCTG AAGGCGAAGGTGCAAGGCGTGATGGTGGCCTGCGAGACAGCTTGCAGCGA CCGTTAACCAAAATTCAACTTTTCTCTCCATCCCCCCAAAAAAAACTAGA AGTAGTGGCGCCACCAAACGCAACCAAAGAGGCTCACCTTGCATAGCAGA CACAGAGAGGCTAGCACGTTTGCCACAAACTATCAGATCGGTCGCTGCTG ACCGCACAAAGCTAGCAGCCTGCGGAGCAGCAGTAGGTAGGAAGTCCGCA GCAGGAGCAGCGAAGTGCAGGCGATACATATGGTGGCCCTGCGAGACAGC TTGCAGTCCTCCTTCACTTATCCACTCATTCACTCATTCCCAGGCCCAGC CGACCGTGTGAGGCAAAGGCAGGTGCAGGCCTGTCAGCGTGCGTGCGTCT GCATCGCGTCGGTCGAGCGCGACGAGAGCGGTGCATGGAAGATAGCGAGG GTGCCGGGGATGGTAGTCCCGCTGGACTCGACGCCCGGCGACCCTACCGC TGTCACCTTGTCCTGCAACGACGTCGGGACGCTGGCCATCTTCTACAGGC GGAGGAGGACGAGGAGCGCGGTCGACGTGGATTCGGAGAGGACCAATGCG GGGATTCTGGCGGCGGTCCACGAGTCCGTCAGGGCTGTTCTGTGGGCGCA ACGGCTCAGCTCCCGCAGGAGGGTCGGGCACTGGCACACCTTCGGCCCGC GGTGGCCTGACAGCAAACCTGACTGGGGGAGTGACGCTAACTCGCGCGAG CGCTGCGCCGATCTGAGCCGCCTGCTGCTCGCGCTGCGCCCTGAGCTCAG CTGTTTTGACGTCCGCACGCGCGGCGCCTTCGCGCTCTCCGGCGGCGCCG AGCTGGTCTGCTCGTACCAGTTTCACCTGCAGCGCACGGGCCCCGGGGCG CAGATACCGCGCGGCCTGCGCGCCGCGCATGCGACGTTCAAGTTCACGCG CTGCGGGCGCCGTCGGCCCGAGATAGACTATGCAGGGCTCGCGGAGGGGC TGCTCAACGCCCCGGCGCCCAAACTCGCGGGAGAGGCGTGCGTCTGGGTG CTGCAGCGCGTCGCTCTTCCTGCGCGTGGCGACACGAGGATCCTGGAGGC GATAGCGGCCGCGATGGCGGTGCGCCACGCGCGCCGGTTGGACGGCGATT GGCCGCCCGCAGGCGTGGCGGTCGAGCTGGCGAGCATTGCGCGTGTGCGG GACCCTGTGGGCTACGGCGCGTCGTTCGGCATGGTTGAGGTGCCGACGGG AACGCACGGGTGCTGGCTTTTCCACACGCCCGAGGGGGAAGGGGACCCGC GCGCTCACGAGCTCCACGTCAACCGCTGGCAGGGCGGGCACTGGAACGTG GAGTTCTCCTCCCTCGGCGCGTGCCGCAACTGCGACAGCGAGAACGAGAG CGCCAGCGGGAGCGGCGCGAGCGGGAGCGAGAGCGATGACGAGGACGTAG AGGACGGCCCTTAG
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Coding sequence (CDS) from alignment at Contig_98:390730..392743+

>mRNA_14920 ID=mRNA_14920|Name=jgi.p|Trimin1|339741|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1224bp|location=Sequence derived from alignment at Contig_98:390730..392743+ (Tribonema minus UTEX_B_3156 )
ATGTCACGCGACACCCAAGCGCTGCTACACGCACTCGCCGAGCAGAGCTC
GCAGGGCAGCTACAATCTCGCGCAGCGCGTTGCCTTCTGGCGCCGCCGCA
CCTCCCTCGCGCTACAGCGCGCGCTCACACGTGTCGTGATCGACAACTGG
AACGCAGTCATTGCCCCTGATGGCGACCGCGACGAGAGCGGTGCATGGAA
GATAGCGAGGGTGCCGGGGATGGTAGTCCCGCTGGACTCGACGCCCGGCG
ACCCTACCGCTGTCACCTTGTCCTGCAACGACGTCGGGACGCTGGCCATC
TTCTACAGGCGGAGGAGGACGAGGAGCGCGGTCGACGTGGATTCGGAGAG
GACCAATGCGGGGATTCTGGCGGCGGTCCACGAGTCCGTCAGGGCTGTTC
TGTGGGCGCAACGGCTCAGCTCCCGCAGGAGGGTCGGGCACTGGCACACC
TTCGGCCCGCGGTGGCCTGACAGCAAACCTGACTGGGGGAGTGACGCTAA
CTCGCGCGAGCGCTGCGCCGATCTGAGCCGCCTGCTGCTCGCGCTGCGCC
CTGAGCTCAGCTGTTTTGACGTCCGCACGCGCGGCGCCTTCGCGCTCTCC
GGCGGCGCCGAGCTGGTCTGCTCGTACCAGTTTCACCTGCAGCGCACGGG
CCCCGGGGCGCAGATACCGCGCGGCCTGCGCGCCGCGCATGCGACGTTCA
AGTTCACGCGCTGCGGGCGCCGTCGGCCCGAGATAGACTATGCAGGGCTC
GCGGAGGGGCTGCTCAACGCCCCGGCGCCCAAACTCGCGGGAGAGGCGTG
CGTCTGGGTGCTGCAGCGCGTCGCTCTTCCTGCGCGTGGCGACACGAGGA
TCCTGGAGGCGATAGCGGCCGCGATGGCGGTGCGCCACGCGCGCCGGTTG
GACGGCGATTGGCCGCCCGCAGGCGTGGCGGTCGAGCTGGCGAGCATTGC
GCGTGTGCGGGACCCTGTGGGCTACGGCGCGTCGTTCGGCATGGTTGAGG
TGCCGACGGGAACGCACGGGTGCTGGCTTTTCCACACGCCCGAGGGGGAA
GGGGACCCGCGCGCTCACGAGCTCCACGTCAACCGCTGGCAGGGCGGGCA
CTGGAACGTGGAGTTCTCCTCCCTCGGCGCGTGCCGCAACTGCGACAGCG
AGAACGAGAGCGCCAGCGGGAGCGGCGCGAGCGGGAGCGAGAGCGATGAC
GAGGACGTAGAGGACGGCCCTTAG
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