mRNA_14850 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|175552 vs. uniprot
Match: A0A836CMD2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMD2_9STRA) HSP 1 Score: 375 bits (963), Expect = 1.690e-131 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 1 Query: 1 MAQAALNGVSDEGELDKDNDILGKIFVGGISWQTSDESLSKYFSKFGALADVALMKDKYTGQPRGFGFIKFEDPAVVDVVLTQAEHSIDGRTVDVKRAVPKSEAPGPSRTARPADTNKVFVGGLAPSVTVAEFRTYFEGFGAVSDAVVMFDRQTLRSRGFGFVTFQEDSVVQNVLMGTHEINGERSLSPS 570 MAQAALNGVSDEGELDKDNDILGKIFVGGISWQTSDESLSKYFSKFGALADVALMKDKYTGQPRGFGFIKFEDPAVVDVVLTQAEHSIDGRTVDVKRAVPKSEAPGPSRTARPADTNKVFVGGLAPSVTVAEFRTYFEGFGAVSDAVVMFDRQTLRSRGFGFVTFQEDSVVQNVLMGTHEINGERSLSPS Sbjct: 1 MAQAALNGVSDEGELDKDNDILGKIFVGGISWQTSDESLSKYFSKFGALADVALMKDKYTGQPRGFGFIKFEDPAVVDVVLTQAEHSIDGRTVDVKRAVPKSEAPGPSRTARPADTNKVFVGGLAPSVTVAEFRTYFEGFGAVSDAVVMFDRQTLRSRGFGFVTFQEDSVVQNVLMGTHEINGERSLSPS 190
BLAST of jgi.p|Trimin1|175552 vs. uniprot
Match: A0A835ZAL5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL5_9STRA) HSP 1 Score: 290 bits (743), Expect = 7.100e-96 Identity = 144/174 (82.76%), Postives = 158/174 (90.80%), Query Frame = 1 Query: 40 ELDKDNDILGKIFVG---GISWQTSDESLSKYFSKFGALADVALMKDKYTGQPRGFGFIKFEDPAVVDVVLTQAEHSIDGRTVDVKRAVPKSEAPGPSRTARPADTNKVFVGGLAPSVTVAEFRTYFEGFGAVSDAVVMFDRQTLRSRGFGFVTFQEDSVVQNVLMGTHEINGE 552 E+DKD+D+ GK+FVG GISWQTS+ESLS +FSKFGALADVALMKDKYTGQPRGFGFIKFEDP+V+D VL Q EH+IDGR VDVKRAVPKSEAPGP+R R AD NKVFVGGLAPSVT AEFR YFEGFGAVSDAVVMFDRQT RSRGFGFVTFQ++SVVQNVLMGTHE+NG+ Sbjct: 6 EIDKDSDVTGKLFVGKSSGISWQTSEESLSYHFSKFGALADVALMKDKYTGQPRGFGFIKFEDPSVLDAVLAQPEHNIDGRVVDVKRAVPKSEAPGPARATRQADFNKVFVGGLAPSVTAAEFRQYFEGFGAVSDAVVMFDRQTQRSRGFGFVTFQDESVVQNVLMGTHELNGK 179
BLAST of jgi.p|Trimin1|175552 vs. uniprot
Match: D7FW71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW71_ECTSI) HSP 1 Score: 261 bits (666), Expect = 4.080e-82 Identity = 127/178 (71.35%), Postives = 152/178 (85.39%), Query Frame = 1 Query: 22 GVSDEGELDKDNDILGKIFVGGISWQTSDESLSKYFSKFGALADVALMKDKYTGQPRGFGFIKFEDPAVVDVVLTQAEHSIDGRTVDVKRAVPKSEAPGPS-RTARPADTNKVFVGGLAPSVTVAEFRTYFEGFGAVSDAVVMFDRQTLRSRGFGFVTFQEDSVVQNVLMGTHEINGE 552 G++ DKDND+ GK+F+GGISWQT++E L +F K+G LAD+ALMKDKYTG PRGFGFIKFED V+D +L+Q EH IDG+ VDVKRAVPKSEAPGPS R++RPA+TNK+FVGGLAP+V +AEFR YFE FG V DAVVMFDRQT RSRGFGFVTFQED+VV +++MGTHEING+ Sbjct: 133 GIAGSVAHDKDNDVEGKLFIGGISWQTTEEGLRHHFGKYGTLADIALMKDKYTGHPRGFGFIKFEDITVLDEILSQ-EHKIDGKVVDVKRAVPKSEAPGPSSRSSRPAETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHDIMMGTHEINGK 309
BLAST of jgi.p|Trimin1|175552 vs. uniprot
Match: A0A6H5JV91_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV91_9PHAE) HSP 1 Score: 202 bits (515), Expect = 1.570e-61 Identity = 101/131 (77.10%), Postives = 115/131 (87.79%), Query Frame = 1 Query: 163 MKDKYTGQPRGFGFIKFEDPAVVDVVLTQAEHSIDGRTVDVKRAVPKSEAPGPS-RTARPADTNKVFVGGLAPSVTVAEFRTYFEGFGAVSDAVVMFDRQTLRSRGFGFVTFQEDSVVQNVLMGTHEINGE 552 MKDKYTG PRGFGFIKFED V+D +L+Q EH IDG+ VDVKRAVPKSEAPGPS R++RPA+TNK+FVGGLAP+V +AEFR YFE FG V DAVVMFDRQT RSRGFGFVTFQED+VV ++MGTHEING+ Sbjct: 1 MKDKYTGHPRGFGFIKFEDVTVLDEILSQ-EHKIDGKVVDVKRAVPKSEAPGPSSRSSRPAETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHEIMMGTHEINGK 130
BLAST of jgi.p|Trimin1|175552 vs. uniprot
Match: A0A7S2XZ50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ50_9STRA) HSP 1 Score: 195 bits (495), Expect = 1.910e-58 Identity = 93/162 (57.41%), Postives = 123/162 (75.93%), Query Frame = 1 Query: 67 GKIFVGGISWQTSDESLSKYFSKFGALADVALMKDKYTGQPRGFGFIKFEDPAVVDVVLTQAEHSIDGRTVDVKRAVPKSEAPGPSRTARPADTNKVFVGGLAPSVTVAEFRTYFEGFGAVSDAVVMFDRQTLRSRGFGFVTFQEDSVVQNVLMGTHEINGE 552 GK+F+GG+SWQT+++ L YF KFG L DVA+MKDK+TGQPRGFGF+ F+D +VV+ VL Q H++DGR VD KRAV + E+ P ++ K+FVGGLAPSV +FR YF+ FG ++DAVVM DR T RSRGFGFVT+ ++S V++VL G+HEI G+ Sbjct: 5 GKVFIGGVSWQTTEDGLRYYFEKFGELTDVAVMKDKFTGQPRGFGFVTFKDTSVVEKVLGQT-HTLDGRQVDCKRAVRREESSAPRGGGYGGESKKIFVGGLAPSVEEDDFRGYFDKFGTITDAVVMMDRNTGRSRGFGFVTYDDESSVRDVLAGSHEIKGK 165
BLAST of jgi.p|Trimin1|175552 vs. uniprot
Match: A0A7S3UV52_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV52_HETAK) HSP 1 Score: 196 bits (499), Expect = 2.110e-58 Identity = 99/181 (54.70%), Postives = 133/181 (73.48%), Query Frame = 1 Query: 7 QAALNGVSDEGELDKDNDILGKIFVGGISWQTSDESLSKYFSKFGALADVALMKDKYTGQPRGFGFIKFEDPAVVDVVLTQAEHSIDGRTVDVKRAVPKSEAPGP-SRTARPADTNKVFVGGLAPSVTVAEFRTYFEGFGAVSDAVVMFDRQTLRSRGFGFVTFQEDSVVQNVLMGTHEIN 546 +AA++G D G+ + +DI KIFVGGISW T+++ L YF KFG + V LMKD++TGQPRGF F+KFED +V+D VL HSIDGR VDVKRAVP+ +AP + +++P + K+FVGGLAP+V A+F+ YF FG V+DAVVM DR+T RSRGFGF+TF+ + V++ L TH I+ Sbjct: 30 EAAVDG--DAGKKTEQDDIEFKIFVGGISWATTEDGLKFYFDKFGKVEQVNLMKDRHTGQPRGFAFVKFEDKSVIDSVLQAEAHSIDGRNVDVKRAVPRDQAPARGANSSKPVEALKIFVGGLAPTVNEADFKEYFSKFGEVTDAVVMIDRKTSRSRGFGFITFKTEQSVKDALKETHLIH 208
BLAST of jgi.p|Trimin1|175552 vs. uniprot
Match: A0A835ZEL4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEL4_9STRA) HSP 1 Score: 189 bits (481), Expect = 5.960e-58 Identity = 97/162 (59.88%), Postives = 119/162 (73.46%), Query Frame = 1 Query: 52 DNDILGKIFVGGISWQTSDESLSKYFSKFGALADVALMKDKYTGQPRGFGFIKFEDPAVVDVVLTQAEHSIDGRTVDVKRAVPKSE--APGPSRTARPADTN-----KVFVGGLAPSVTVAEFRTYFEGFGAVSDAVVMFDRQTLRSRGFGFVTFQEDSVVQ 516 D +GKIFVGGI+WQT+D +L YF +FG L D+ALMKDK TGQPRGFGFIKF+DPA+ +VVL Q EH+IDGR VDVKRA P+ + P PSR+A PA N K+FVGGL SV FR +FE FG ++D+V+M+DR T RSRGFGF+TF+ VQ Sbjct: 28 DGSEIGKIFVGGIAWQTTDSALRYYFERFGELDDIALMKDKMTGQPRGFGFIKFKDPAIAEVVLGQ-EHNIDGRIVDVKRATPRQQNAGPAPSRSAPPARGNGPPSMKIFVGGLEQSVDDPAFRAHFEQFGVITDSVIMYDRVTKRSRGFGFITFENQGSVQ 188
BLAST of jgi.p|Trimin1|175552 vs. uniprot
Match: F0WG76_9STRA (Uncharacterized protein AlNc14C88G5606 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WG76_9STRA) HSP 1 Score: 192 bits (489), Expect = 4.340e-56 Identity = 96/175 (54.86%), Postives = 128/175 (73.14%), Query Frame = 1 Query: 67 GKIFVGGISWQTSDESLSKYFSKFGALADVALMKDKYTGQPRGFGFIKFEDPAVVDVVLTQAEHSIDGRTVDVKRAVPKSE-APGPSRTARPA------------DTNKVFVGGLAPSVTVAEFRTYFEGFGAVSDAVVMFDRQTLRSRGFGFVTFQEDSVVQNVLMGTHEINGE 552 GK+F+GG+SW+T++E+L +F K+G L D ALMKDK++GQPRGFGF+ F D AV+D VL ++ H+IDGRTV+VKRA+P+ + A GPS ++ KVFVGGL PSVT +FR YFE FG ++DAVVMFDR+T RSRGFGFVTF+E+ V V+ THE++G+ Sbjct: 102 GKLFIGGVSWETTEETLRDHFGKYGPLTDAALMKDKFSGQPRGFGFVTFADVAVLDRVLEES-HTIDGRTVEVKRAIPRDKTASGPSDVRSSGAHGRGNSGGVITESKKVFVGGLPPSVTEQDFRRYFEEFGRITDAVVMFDRETQRSRGFGFVTFEEEGAVAEVISKTHELHGK 275
BLAST of jgi.p|Trimin1|175552 vs. uniprot
Match: W4FGL9_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FGL9_9STRA) HSP 1 Score: 192 bits (488), Expect = 5.480e-56 Identity = 93/178 (52.25%), Postives = 127/178 (71.35%), Query Frame = 1 Query: 67 GKIFVGGISWQTSDESLSKYFSKFGALADVALMKDKYTGQPRGFGFIKFEDPAVVDVVLTQAEHSIDGRTVDVKRAVPKSEAPG----------------PSRTARPADTNKVFVGGLAPSVTVAEFRTYFEGFGAVSDAVVMFDRQTLRSRGFGFVTFQEDSVVQNVLMGTHEINGE 552 GKIFVGG+SW+T++++L +F ++GAL D ALMKDKY+GQPRGFGF+ FED +VVD VL++ H++DGR V+VKRAVP+ A G RP+++ K+FVGGL PSVT +FR YFE FG ++DA+VM DR T RSRGFGFV+F+E+ V V+ +HE++G+ Sbjct: 89 GKIFVGGVSWETTEDNLRSHFGQYGALTDAALMKDKYSGQPRGFGFVTFEDASVVDRVLSET-HTLDGRNVEVKRAVPRDSAGGGXXXXXXXXXXXXXXXXXXXGRPSESKKIFVGGLPPSVTNDDFRAYFEDFGKITDAIVMMDRDTQRSRGFGFVSFEEEGAVAEVISKSHELHGK 265
BLAST of jgi.p|Trimin1|175552 vs. uniprot
Match: A0A6G0XAN2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XAN2_9STRA) HSP 1 Score: 190 bits (483), Expect = 1.610e-55 Identity = 94/178 (52.81%), Postives = 129/178 (72.47%), Query Frame = 1 Query: 67 GKIFVGGISWQTSDESLSKYFSKFGALADVALMKDKYTGQPRGFGFIKFEDPAVVDVVLTQAEHSIDGRTVDVKRAVPKSE-----APGPSRTA-----------RPADTNKVFVGGLAPSVTVAEFRTYFEGFGAVSDAVVMFDRQTLRSRGFGFVTFQEDSVVQNVLMGTHEINGE 552 GKIFVGG+SW+T++++L +FS++G L D ALMKDKY+GQPRGFGF+ FEDP+VVD VL + H++DGR V+VKRAVP+ + GPS + R ++ K+FVGGL P+VT +FR+YFE FG ++DAVVM DR T RSRGFGFV+F+E+ V V+ +HE++G+ Sbjct: 76 GKIFVGGVSWETTEDNLRAHFSQYGNLTDAALMKDKYSGQPRGFGFVTFEDPSVVDRVLNET-HNLDGRNVEVKRAVPRDSMVGGRSGGPSTSGSGYSDGRSGGGRTIESKKIFVGGLPPTVTNEDFRSYFEDFGKITDAVVMMDRDTQRSRGFGFVSFEEEGAVAEVISKSHELHGK 252 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|175552 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_14850 ID=mRNA_14850|Name=jgi.p|Trimin1|175552|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=573bp|location=Sequence derived from alignment at Contig_127:140898..143315+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCGCAGGCGGCGCTGAACGGGGTGTCAGACGAGGGCGAGCTTGACAAback to top protein sequence of jgi.p|Trimin1|175552 >Trimin1|175552|e_gw1.127.3.1 ID=Trimin1|175552|e_gw1.127.3.1|Name=jgi.p|Trimin1|175552|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=191bp MAQAALNGVSDEGELDKDNDILGKIFVGGISWQTSDESLSKYFSKFGALAback to top mRNA from alignment at Contig_127:140898..143315+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_14850 ID=mRNA_14850|Name=jgi.p|Trimin1|175552|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2418bp|location=Sequence derived from alignment at Contig_127:140898..143315+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_127:140898..143315+ >mRNA_14850 ID=mRNA_14850|Name=jgi.p|Trimin1|175552|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=573bp|location=Sequence derived from alignment at Contig_127:140898..143315+ (Tribonema minus UTEX_B_3156 )back to top |