mRNA_14641 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|172740 vs. uniprot
Match: A0A835YK80_9STRA (Aquarius_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK80_9STRA) HSP 1 Score: 282 bits (721), Expect = 4.170e-96 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1 Query: 1 MAAAVAALSITEVKRPRLGEKVPAEVRADLEYTVAALSPLVRAEWDALREHDVVFLLALHGPPPDATPAQLAQLPFVERYGLMAVRGGEVVEQRDESDNVMNEFFARNDKKKGPPGVKRTLKLLLDAAQVCRVWRVAIRARVTC 432 MAAAVAALSITEVKRPRLGEKVPAEVRADLEYTVAALSPLVRAEWDALREHDVVFLLALHGPPPDATPAQLAQLPFVERYGLMAVRGGEVVEQRDESDNVMNEFFARNDKKKGPPGVKRTLKLLLDAAQVCRVWRVAIRARVTC Sbjct: 1 MAAAVAALSITEVKRPRLGEKVPAEVRADLEYTVAALSPLVRAEWDALREHDVVFLLALHGPPPDATPAQLAQLPFVERYGLMAVRGGEVVEQRDESDNVMNEFFARNDKKKGPPGVKRTLKLLLDAAQVCRVWRVAIRARVTC 144
BLAST of jgi.p|Trimin1|172740 vs. uniprot
Match: A0A7C8ZCI0_OPUST (Aquarius_N domain-containing protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8ZCI0_OPUST) HSP 1 Score: 98.2 bits (243), Expect = 1.590e-23 Identity = 53/128 (41.41%), Postives = 80/128 (62.50%), Query Frame = 1 Query: 1 MAAAVAALSITEVKRPRLGEKVPAEVRADLEYTVAALSPLVRAEWDALREHDVVFLLALHGPPPDATPAQLAQLPFVERYGLMAVRGGEVVEQRDESDNVMNEFFAR--NDKKKGPPGVKRTLKLLLD 378 MA + ITEVK+P +GE PA V A++ Y++++ +R+EWDAL+EHDV+FLL++ + + A+ +R GL VRG E++E RDE ++MN+F R D+ K P G RT+K+ LD Sbjct: 8 MAVPIKEFKITEVKQPNIGEVKPAAVTAEIAYSISSYRAHIRSEWDALKEHDVLFLLSIRPSFEPLSADEAAKATVPQRLGLQYVRGCEIIEIRDEEGSLMNDFTGRIKRDEWKPPKGEMRTVKVALD 135
BLAST of jgi.p|Trimin1|172740 vs. uniprot
Match: A0A0E0GNH0_ORYNI (Uncharacterized protein n=13 Tax=Magnoliopsida TaxID=3398 RepID=A0A0E0GNH0_ORYNI) HSP 1 Score: 104 bits (260), Expect = 2.700e-23 Identity = 55/131 (41.98%), Postives = 84/131 (64.12%), Query Frame = 1 Query: 1 MAAAVAALSITEVKRPRLGEKVPAEVRADLEYTVAALSPLVRAEWDALREHDVVFLLALHGPPPDATPAQLAQLPFVERYGLMAVRGGEVVEQRDESDNVMNEFFAR--NDKKKGPPGVKRTLKLLLDAAQ 387 MA + ITE+K+P +GE P+ V AD+ +++++ P +++EWDAL+EHDV+FLL++ +P + A+ ER GL VRG EV+E RDE ++MN+F R ++ K P G RT+K+ LD AQ Sbjct: 562 MAVPIKEFRITEMKQPNIGEVKPSAVTADVTFSISSYKPQIKSEWDALKEHDVLFLLSIRPSFEPLSPEEAAKSTVPERLGLQCVRGCEVIEIRDEEGSLMNDFTGRIKREEWKPPKGEIRTVKIALDTAQ 692
BLAST of jgi.p|Trimin1|172740 vs. uniprot
Match: A0A8J5WU82_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5WU82_ZIZPA) HSP 1 Score: 103 bits (258), Expect = 4.940e-23 Identity = 55/131 (41.98%), Postives = 84/131 (64.12%), Query Frame = 1 Query: 1 MAAAVAALSITEVKRPRLGEKVPAEVRADLEYTVAALSPLVRAEWDALREHDVVFLLALHGPPPDATPAQLAQLPFVERYGLMAVRGGEVVEQRDESDNVMNEFFAR--NDKKKGPPGVKRTLKLLLDAAQ 387 MA + IT+VK+P +GE P+ V AD+ +++++ P +++EWDAL+EHDV+FLL++ +P + A+ ER GL VRG EV+E RDE ++MN+F R ++ K P G RT+K+ LD AQ Sbjct: 419 MAVPIKEFKITQVKQPDIGEVKPSAVTADVTFSISSYKPQIKSEWDALKEHDVLFLLSIRPSFEPLSPEEAAKSTVPERLGLQYVRGCEVIEIRDEESSLMNDFTGRIKREEWKPPKGEIRTVKIALDTAQ 549
BLAST of jgi.p|Trimin1|172740 vs. uniprot
Match: D8SIR2_SELML (Uncharacterized protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SIR2_SELML) HSP 1 Score: 102 bits (255), Expect = 1.250e-22 Identity = 60/133 (45.11%), Postives = 86/133 (64.66%), Query Frame = 1 Query: 1 MAAAVAALSITEVKRPRLGEKVPAEVRADLEYTVAALSPLVRAEWDALREHDVVFLLAL--HGPPPDATPAQLAQLPFVERYGLMAVRGGEVVEQRDESDNVMNEFFAR--NDKKKGPPGVKRTLKLLLDAAQ 387 MA V + IT+VK P +G+ P+ V A++ +++A P +RAEWD L+EHDV+FLL + H PP + AQ +P E+YGL VRG E+VE RDE +++MN+F R ++ K P G +RT+ L LD AQ Sbjct: 488 MATPVKSFKITQVKEPNIGDIKPSSVTAEVTFSIARCDPQLRAEWDDLKEHDVLFLLTVMPHLKPPSSEIAQHMTVP--EKYGLKYVRGCEIVEIRDEVNHLMNDFTGRVKREEWKPPQGDQRTVVLALDCAQ 618
BLAST of jgi.p|Trimin1|172740 vs. uniprot
Match: A0A8J5VXT2_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5VXT2_ZIZPA) HSP 1 Score: 101 bits (252), Expect = 3.180e-22 Identity = 54/131 (41.22%), Postives = 83/131 (63.36%), Query Frame = 1 Query: 1 MAAAVAALSITEVKRPRLGEKVPAEVRADLEYTVAALSPLVRAEWDALREHDVVFLLALHGPPPDATPAQLAQLPFVERYGLMAVRGGEVVEQRDESDNVMNEFFAR--NDKKKGPPGVKRTLKLLLDAAQ 387 MA + I EVK+P +GE P+ V A++ +++++ P +++EWDAL+EHDV+FLL++ +P + A+ ER GL VRG EV+E RDE ++MN+F R ++ K P G RT+K+ LD AQ Sbjct: 559 MAVPIKEFKIAEVKQPNIGEVKPSAVTANVTFSISSYKPQIKSEWDALKEHDVLFLLSIRPSFEPLSPEEAAKSTVPERLGLQYVRGCEVIEIRDEEGSLMNDFTGRIKREEWKPPKGEIRTVKIALDTAQ 689
BLAST of jgi.p|Trimin1|172740 vs. uniprot
Match: A0A5J9WHF0_9POAL (Uncharacterized protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9WHF0_9POAL) HSP 1 Score: 101 bits (252), Expect = 3.200e-22 Identity = 55/131 (41.98%), Postives = 83/131 (63.36%), Query Frame = 1 Query: 1 MAAAVAALSITEVKRPRLGEKVPAEVRADLEYTVAALSPLVRAEWDALREHDVVFLLALHGPPPDATPAQLAQLPFVERYGLMAVRGGEVVEQRDESDNVMNEFFAR--NDKKKGPPGVKRTLKLLLDAAQ 387 MA + ITEVK+P +GE P+ V AD+ +++++ P +++EW+AL+EHDV+FLL++ + +LA+ ER GL VRG EV+E RDE +MN+F R ++ K P G RT+K+ LD AQ Sbjct: 609 MAVPIKQFKITEVKQPNIGEVKPSAVTADVTFSISSYRPQIKSEWNALKEHDVLFLLSIRPSFEPLSSEELAKSTVPERLGLQYVRGCEVIEIRDEEGTLMNDFTGRIKREEWKPPKGEIRTVKIALDTAQ 739
BLAST of jgi.p|Trimin1|172740 vs. uniprot
Match: D3U059_9ROSI (Embryo defective 2765 (Fragment) n=551 Tax=Mesangiospermae TaxID=1437183 RepID=D3U059_9ROSI) HSP 1 Score: 98.2 bits (243), Expect = 3.480e-22 Identity = 52/131 (39.69%), Postives = 81/131 (61.83%), Query Frame = 1 Query: 1 MAAAVAALSITEVKRPRLGEKVPAEVRADLEYTVAALSPLVRAEWDALREHDVVFLLALHGPPPDATPAQLAQLPFVERYGLMAVRGGEVVEQRDESDNVMNEFFAR--NDKKKGPPGVKRTLKLLLDAAQ 387 MA + ITEVK+P +GE P+ + A++ +++++ +R+EWDAL+EHDV+FLL++ + + A+ +R GL VRG E++E RDE +MN+F R D+ K P G RT+ + LDAAQ Sbjct: 77 MAVPIKEFKITEVKQPNIGEVKPSSITAEVTFSISSYKAQIRSEWDALKEHDVLFLLSIRPSFEPLSAEETAKASVPQRLGLQYVRGCEIIEIRDEEGTLMNDFSGRIKRDEWKPPKGQLRTVTVALDAAQ 207
BLAST of jgi.p|Trimin1|172740 vs. uniprot
Match: A0A7S4PVM5_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4PVM5_9DINO) HSP 1 Score: 101 bits (251), Expect = 4.370e-22 Identity = 55/131 (41.98%), Postives = 82/131 (62.60%), Query Frame = 1 Query: 1 MAAAVAALSITEVKRPRLGEKVPAEVRADLEYTVAALSPLVRAEWDALREHDVVFLLALHGP--PPDATPAQLAQLPFVERYGLMAVRGGEVVEQRDESDNVMNEFFARNDKKKGPPGVKRTLKLLLDAAQ 387 MA + + + V+RPR+G++VPAEVRA++ + + P VRAEWD LREHDV+FLL + P P D +L+ F E++G+ +RG EV E DE NV+++ ++K P G R +++LLD AQ Sbjct: 750 MALPLKGMEVMNVRRPRVGDQVPAEVRAEVRFCLTGTMPHVRAEWDQLREHDVIFLLRVEAPQDPFDGKVTELSVSEFPEKFGVRVLRGAEVTELLDEEGNVISD--PNPSERKTPVGDTRVVRVLLDPAQ 878
BLAST of jgi.p|Trimin1|172740 vs. uniprot
Match: A0A7S3UNF0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UNF0_HETAK) HSP 1 Score: 95.1 bits (235), Expect = 5.070e-22 Identity = 58/148 (39.19%), Postives = 76/148 (51.35%), Query Frame = 1 Query: 25 SITEVKRPRLGEKVPAEVRADLEYTVAALSPLVRAEWDALREHDVVFLLALHGPPPDATPAQLAQLP------------------------FVERYGLMAVRGGEVVEQRDESDNVMNEFFARNDKKKGPPGVKRTLKLLLDAAQVCR 396 +I EV +P LGEKVPA+VRA+++ V A R EWDALREHDV+FL + P D A L F +RYG++ VRGGEV E D N+MN+ + + P G RT++LL+D AQ R Sbjct: 4 TIVEVTKPELGEKVPAQVRAEVQVDVGAFQGEARFEWDALREHDVLFLATVSSPMRDEESGYNAFLDDQGRGGRKQGMKRGQTKWMEEDETFPQRYGVVYVRGGEVYEMADAEGNLMNDPSKPEARGRAPKGTLRTVRLLMDPAQYYR 151 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|172740 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_14641 ID=mRNA_14641|Name=jgi.p|Trimin1|172740|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=435bp|location=Sequence derived from alignment at Contig_95:149759..151774+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCGGCGGCGGTTGCTGCGCTGAGCATCACCGAAGTGAAGCGGCCGCGback to top protein sequence of jgi.p|Trimin1|172740 >Trimin1|172740|e_gw1.95.18.1 ID=Trimin1|172740|e_gw1.95.18.1|Name=jgi.p|Trimin1|172740|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=145bp MAAAVAALSITEVKRPRLGEKVPAEVRADLEYTVAALSPLVRAEWDALREback to top mRNA from alignment at Contig_95:149759..151774+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_14641 ID=mRNA_14641|Name=jgi.p|Trimin1|172740|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2016bp|location=Sequence derived from alignment at Contig_95:149759..151774+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_95:149759..151774+ >mRNA_14641 ID=mRNA_14641|Name=jgi.p|Trimin1|172740|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=435bp|location=Sequence derived from alignment at Contig_95:149759..151774+ (Tribonema minus UTEX_B_3156 )back to top |