mRNA_14569 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|353199 vs. uniprot
Match: A0A836CKZ3_9STRA (Cytochrome P450 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKZ3_9STRA) HSP 1 Score: 973 bits (2515), Expect = 0.000e+0 Identity = 540/540 (100.00%), Postives = 540/540 (100.00%), Query Frame = 1
Query: 1 MAHKYRAPGCFTVDLAGLSLHILTGQEAVDWFYKAPESELSERAAALDFGFAETLGHLNANAGAEVAESAAVMAGIAPGEAAVFNDGMLLVRRMSLHALVSYLVGRRVLELCPSLLADFLLLQDDVDEATAKAAAIPKTMGRPFFLQPVAERRRALTKRLAAAIKAAWEEDAEPQAHSSSGSGITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVWPKALRALPSKGAIGAWAEYVHSEAHRERLRRPADKEAARPVHPVEAASLAVGVLLCAHSGCATGAAQTLFALLEHPREMAALRAEMERSGVPTRERMLDVPPSARAQAWGDQIAGAAGAESLVHGSAPLCRRLDACINEALRLSAHAIGAVRKVVAPEGALVPAARGAPRRLPHGTYAAVSFIAAHRDAARFADPCAYRPARHLQEEGGGVEGVGGARSPQQLLHFSSGRHRCPGEAFAGLVMRSAVLALLSRFEIEVRLHVRSAAIGGDRMDARAGAGHWTRMWGGDAALRLAAPLPELDFGSAALAQRRDKCQLRLKANW 1620
MAHKYRAPGCFTVDLAGLSLHILTGQEAVDWFYKAPESELSERAAALDFGFAETLGHLNANAGAEVAESAAVMAGIAPGEAAVFNDGMLLVRRMSLHALVSYLVGRRVLELCPSLLADFLLLQDDVDEATAKAAAIPKTMGRPFFLQPVAERRRALTKRLAAAIKAAWEEDAEPQAHSSSGSGITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVWPKALRALPSKGAIGAWAEYVHSEAHRERLRRPADKEAARPVHPVEAASLAVGVLLCAHSGCATGAAQTLFALLEHPREMAALRAEMERSGVPTRERMLDVPPSARAQAWGDQIAGAAGAESLVHGSAPLCRRLDACINEALRLSAHAIGAVRKVVAPEGALVPAARGAPRRLPHGTYAAVSFIAAHRDAARFADPCAYRPARHLQEEGGGVEGVGGARSPQQLLHFSSGRHRCPGEAFAGLVMRSAVLALLSRFEIEVRLHVRSAAIGGDRMDARAGAGHWTRMWGGDAALRLAAPLPELDFGSAALAQRRDKCQLRLKANW
Sbjct: 1 MAHKYRAPGCFTVDLAGLSLHILTGQEAVDWFYKAPESELSERAAALDFGFAETLGHLNANAGAEVAESAAVMAGIAPGEAAVFNDGMLLVRRMSLHALVSYLVGRRVLELCPSLLADFLLLQDDVDEATAKAAAIPKTMGRPFFLQPVAERRRALTKRLAAAIKAAWEEDAEPQAHSSSGSGITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVWPKALRALPSKGAIGAWAEYVHSEAHRERLRRPADKEAARPVHPVEAASLAVGVLLCAHSGCATGAAQTLFALLEHPREMAALRAEMERSGVPTRERMLDVPPSARAQAWGDQIAGAAGAESLVHGSAPLCRRLDACINEALRLSAHAIGAVRKVVAPEGALVPAARGAPRRLPHGTYAAVSFIAAHRDAARFADPCAYRPARHLQEEGGGVEGVGGARSPQQLLHFSSGRHRCPGEAFAGLVMRSAVLALLSRFEIEVRLHVRSAAIGGDRMDARAGAGHWTRMWGGDAALRLAAPLPELDFGSAALAQRRDKCQLRLKANW 540
BLAST of jgi.p|Trimin1|353199 vs. uniprot
Match: R1ED46_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ED46_EMIHU) HSP 1 Score: 112 bits (281), Expect = 7.960e-23 Identity = 158/560 (28.21%), Postives = 211/560 (37.68%), Query Frame = 1
Query: 31 FTVDLAGLSLHILTGQEAV-DWFYKAPESELSERAAALDFGFAETLGHLNANAGAE-----VAESAAVMAGIAPGEAAV--------------------------FNDGMLLVRRMSLHALVSYLVGRRVLELC--PSLLADFLLLQDDVDEATAKAAAIPKTMGRPFFLQPVAERRRALTKRLAAAIKAAWEEDAEPQAHSSSGSGITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVWPKALRALPSKGAIGAWAEYVHSEAHRERLRRPADKEAARPVHPVEAASLAVGVLLCAHSGCATGAAQTLFALLEHPREMAALRAEMERSGVPTRERMLDVPPSARAQAWGDQIAGAAGAESLVHGSAPLCRRLDACINEALRLSAHAIGAVRKVVAPEGALVPAARGAPRRLPHGTYAAVSFIAAHRDAARF-ADPCAYRPARHLQEEGGGVEGVGGARSPQQLLHFSSGRHRCPGEAFAGLVMRSAVLALLSRFEIEVRLHVRSAAIGGDRMDARAGAGHWTRMWGGDAALRLAAPLPELDFGSAALAQRRDKCQLR 1605
F ++LAG + ++ AV A ES LS R A + GF ETLG LN G + + E+ P +A D L R L V L+G VLE + ++ F+ QD +++ATAKAA +P+T+ P L PVA RR LT+RLAAAI A E A+P LG W +A LP + A RRP+ + A LA+G+L +H + GAAQTL ALLE + D P+A ++A + GAE+L C + C+ E LRL AHAIGAVR VVAP G ++ R G A++ +A HR + AD A+RP+R E G S + FS G H CPGE A M V L++ AA+ G PLP + F A LAQR +R
Sbjct: 81 FRLNLAGKRMVVVGPDSAVIKEVATASESILSARRAVAEIGFNETLGSLNVYFGTDLHKRWIKETYGAWWARQPHDAPSGLRDEIRPLWRSLDRSLERERAASLRAADLFGLARATVLRCQVERLLGAPVLEAAGDAAFISAFMSFQDRIEDATAKAAVLPRTLSLPLVLWPVARMRRKLTRRLAAAIACA-ERGADPAT--------------------------------------LGSWLRAAATLPGELA-----------------RRPS----------AQVAELAIGLLFASHKNPSIGAAQTLCALLE----------------------LGDTHPTA------SRLAASPGAEALAG-----CHTIQRCVLETLRLCAHAIGAVRTVVAPGGFVLAGRYWVAR----GETIALAHVAVHRSTEVWGADADAFRPSRPEYGEAGAPASP---PSEYEYTTFSQGLHTCPGERLALRTMELLVAHFLTK----------GAALDG--------------------------PLPPVSFERATLAQRERVVAIR 498
BLAST of jgi.p|Trimin1|353199 vs. uniprot
Match: A0A813J5Y4_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813J5Y4_POLGL) HSP 1 Score: 84.0 bits (206), Expect = 2.070e-13 Identity = 116/482 (24.07%), Postives = 169/482 (35.06%), Query Frame = 1
Query: 28 CFTVDLAGLSLHILTGQEAVDWFYKAPESELSERAAALDFGFAETLGHLNANAGAEVAESAAVMAGIAPGEAAVFNDGMLLVRRMSLHALVSYLVGRRVLELCPSLLADFLLLQDDVDEATAKAAAIPKTMGRPFFLQPVAERRRALTKRLAAAIKAAWEEDAE-----PQAHSSSGSGITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVWP----------KALRALPSKGAIGAWAEYVHSEAHRERLRRPADKEAARPVHPVEAASLAVGVLLCAHSGCATGAAQTLFALLEHPREMAALRAEMERSGVPTRERMLDVPPSARAQAWGDQIAGAAGAESLVHGSAPLCRRLDACINEALRLSAHAIGAVRKVVAPEGALVPAARGAPRRLPHGTYAAVSFIAAHRDAARFADPCAYRPARHLQEEGGGVEGVGGARSPQQLLHFSSGRHRCPGEAFAGLVMRSAVLALLSRFEIEV 1428
CF +++AGL L ++ G+ + A E+ LS ++A DFGFAETLG LN G E+ G+ N R+ L+ V + V P + A + + L V E L A A + AE ++ G+T VW +A+ S+ I AW Y+ A ++ PV P EAA L VG+L +H A AQTL LLEHP EM + AE+ D S +A L+ I+E LR++AH IG +RKVVAPEG + + +P G Y +S + D + F +P + FS G H CPG+ +A M ++ +L R E ++
Sbjct: 79 CFRLNMAGLPLTVVAGRHDMAQVANAGEAILSAQSATADFGFAETLGSLNVYFGTELQHMVLKQTGLG-------NQSSEKARQSD--KLLELAVAKAVRTALPG----------QAGRISDAVAMMRRLSLHAVMLHLVGE------SVLLACDAAGGDFLAEFMTFQDHVEDATAKGVTMPAWFSRLFIWRPVRQERERLQVSLGRAIAAVWASDEPSQALWLEAVHGFQSRSMIPAWRRYLQRHGG-----SVATSQSDPPVSPEEAAELLVGLLFASHKNPAICLAQTLLLLLEHPAEMEKVLAELRNP--------RDASSSNQA--------------------------LELSISETLRITAHTIGGIRKVVAPEGFDLKSGF----HVPFGEYVVLSHTLPNSDPSTFVEPGRFNXXXXXXXX---------XXDEYDFTTFSHGLHACPGQHYARRFMLLSLAMMLHRCEFKL 483
BLAST of jgi.p|Trimin1|353199 vs. uniprot
Match: A0A6U1W8A6_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A6U1W8A6_TRICV) HSP 1 Score: 63.2 bits (152), Expect = 6.820e-8 Identity = 36/90 (40.00%), Postives = 55/90 (61.11%), Query Frame = 1
Query: 256 DGMLLVRRMSLHALVSYLVGRRVLE------LCPSLLADFLLLQDDVDEATAKAAAIPKTMGRPFFLQPVAERRRALTKRLAAAIKAAWE 507
D L+RR+++ +L+ LVGRR ++ P+LL D + QD V++ATAKAA +P+ + P L P A RR+ L RL A ++ AW+
Sbjct: 13 DLFALIRRVAIRSLLRLLVGRRFVDDXXXXXXNPALLDDLMSFQDAVEDATAKAAVLPRPVALPLCLWPTARRRKKLQDRLEALVQNAWD 102
BLAST of jgi.p|Trimin1|353199 vs. uniprot
Match: A0A0M0K676_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K676_9EUKA) HSP 1 Score: 64.3 bits (155), Expect = 3.120e-7 Identity = 92/332 (27.71%), Postives = 126/332 (37.95%), Query Frame = 1
Query: 673 LPSKGAIGAWAEYVHSEAHRERLRRPADKEAARPVHPVEAASLAVGVLLCAHSGCATGAAQTLFALLEHPREMAALRAEMERSGVPTRERMLDVPPSARAQAWGDQIAGAAGAESLVHGSAPLCRRLDAC------INEALRLSAHAIGAVRKVVAPEGALVPAARGAPRRLPHGTYAAVSFIAAHRDAARFADPCA--------YRPARHLQEEGGGVEGVGGARSPQQLLH------FSSGRHRCPGEAFAGLVMRSAVLALLSRFEIEVRLHVRSAAIGGDRMDARAGAGHWTRMWGGDAALRLAAPLPELDFGSAALAQRRDKCQLRL 1608
L A+G+W + R R PA + +E A LA G+L +H + GAAQT+ ALLE PR + D+P G ++ AA E++ + P L C + E LRLSAHAIGAVR V A G ++ A G A++ IA HR A + C Y P H+ ++ + G + +L FS G H+CPGE A M V ALLS + + L LP + F A LAQR+ K Q+ L
Sbjct: 195 LTELAALGSWYRSM-------RGRSPA-------LSSLEIAELATGLLFASHKNPSIGAAQTVCALLELPRPGS------------------DLP--------GSEVREAAFEEAMRMAANPSAATLSECHVIRTAVLETLRLSAHAIGAVRTVAAEGGFILDDKYWAAP----GETIALTHIAVHRSEAIWGPNCKRFSLDRNEYEP--HVADDPKNEHVMDGDPAGGVVLDEYTYTTFSHGLHKCPGERLALRTMECVVAALLS------------------------------------SGVHLDTELPPVSFERATLAQRQGKVQVLL 444
BLAST of jgi.p|Trimin1|353199 vs. uniprot
Match: A0A4P9VZR9_9FUNG (Cytochrome P450 n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9VZR9_9FUNG) HSP 1 Score: 59.7 bits (143), Expect = 2.410e-6 Identity = 36/93 (38.71%), Postives = 50/93 (53.76%), Query Frame = 1
Query: 1168 LPHGTYAAVSFIAAHRDAARFADPCAYRPARHL-QEEGGGVEGVGGARSPQQ-----LLHFSSGRHRCPGEAFAGLVMRSAVLALLSRFEIEV 1428
+P G++ S + D ARF DP + P RHL EEG G + G Q+ L F +GRHRC GEAFA + +R+ + A + FE E+
Sbjct: 107 IPAGSFLCGSQAVSQMDPARFPDPEKFDPRRHLGSEEGSGEWTINGVDVAQKSAKSHFLPFGAGRHRCIGEAFAYIQIRTIITAFIREFEFEL 199
BLAST of jgi.p|Trimin1|353199 vs. uniprot
Match: A0A1Z5K8N6_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8N6_FISSO) HSP 1 Score: 57.0 bits (136), Expect = 6.610e-5 Identity = 54/196 (27.55%), Postives = 87/196 (44.39%), Query Frame = 1
Query: 31 FTVDLAGLSLHILTGQEAVDWFYKAPESELSERAAALDFGFAETLGHLNANAG-----------AEVAESAAVMAGI------------APGEAAVFNDGMLLVRRMSLHALVSYLVGRRVLELCPSLLADFLLLQDDVDEATAKAAAIPKTMGRPFFLQPVAERRRALTKRLAAAIKAAWEEDAEPQAHSSSGSG 549
F ++LAG + ++T ++ APE+ LS A + GF TLG N G A A VM+ + A +D + RR + A + +G+ + +L++D ++ D V++ATAKAA +P+ + P L+PV +R L KR+AA + EP S+S G
Sbjct: 71 FRINLAGRRMIMVTSPAVMEKVTAAPETILSSETAVREIGFDYTLGLFNVTEGTSFHRKVLKSDAHAAFLKRVMSQLQHSFDTELSKTRANKGRVEISDLFVFSRRSFVRACLVAFIGKNLES--DALISDIMIFMDRVEDATAKAAVLPRYLAIPLVLRPVQAQRLQLQKRIAALL--------EPMLQSASAEG 256
BLAST of jgi.p|Trimin1|353199 vs. uniprot
Match: A0A0L0T0R0_ALLM3 (Uncharacterized protein n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0T0R0_ALLM3) HSP 1 Score: 56.6 bits (135), Expect = 9.840e-5 Identity = 50/146 (34.25%), Postives = 66/146 (45.21%), Query Frame = 1
Query: 1051 LDACINEALRLSAHAIGAVRKVVAPE---GALVPAARGAPRRLPHGTYAAVSFIAAHRDAARFADPCAYRPARHL---------------------QEEGGGVEGVGGARSPQQLLHFSSGRHRCPGEAFAGLVMRSAVLALLSRF 1416
LDACI E LRL + +RKVV P G +VPA G Y S + RD + DP A++P R L ++ G GV G G ARS L F +GRHRC GE FA + +++ + L+ F
Sbjct: 373 LDACIRETLRLRSPIYAIMRKVVRPVEIMGHVVPA----------GHYLCASPAVSQRDPEVYEDPMAFKPRRWLDTTNNAQMQKILRAETDMAAAEDFGFGVVG-GSARS--NYLPFGAGRHRCIGEPFAYVQLKTIIATLVREF 505 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353199 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_14569 ID=mRNA_14569|Name=jgi.p|Trimin1|353199|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1725bp|location=Sequence derived from alignment at Contig_148:343923..348921+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCACATAAATACAGAGCACCAGGGTGCTTCACGGTTGACCTTGCCGGback to top protein sequence of jgi.p|Trimin1|353199 >Trimin1|353199|estExt_Genemark1.C_Ctg_1480049 ID=Trimin1|353199|estExt_Genemark1.C_Ctg_1480049|Name=jgi.p|Trimin1|353199|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=541bp MAHKYRAPGCFTVDLAGLSLHILTGQEAVDWFYKAPESELSERAAALDFGback to top mRNA from alignment at Contig_148:343923..348921+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_14569 ID=mRNA_14569|Name=jgi.p|Trimin1|353199|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4999bp|location=Sequence derived from alignment at Contig_148:343923..348921+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_148:343923..348921+ >mRNA_14569 ID=mRNA_14569|Name=jgi.p|Trimin1|353199|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1623bp|location=Sequence derived from alignment at Contig_148:343923..348921+ (Tribonema minus UTEX_B_3156 )back to top |