mRNA_14463 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|153027 vs. uniprot
Match: A0A835ZDJ1_9STRA (REJ domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDJ1_9STRA) HSP 1 Score: 372 bits (955), Expect = 1.720e-128 Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 1
Query: 1 STATPYSWSTYVVLDAAALVPGGTYVFSLSGTDKFKAVGKATITVIANQAPSPGVFEVTPTNGVALETLFTFTGSLWSDDVDDYPLSYRFMYVVGDYTSDSQPVVIRGSSMSPSTTGILPVGNDANRQVSTLLYVSDRLGATAVAISTVTVQPVQKAAAELTAFLSTQATNLLGDAESNQNPELLVSLASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASLEKTSENLDSQ 735
STATPYSWSTYVVLDAAALVPGGTYVFSLSGTDKFKAVGKATITVIANQAPSPGVFEVTPTNGVALETLFTFTGSLWSDDVDDYPLSYRFMYVVGDYTSDSQPVVIRGSSMSPSTTGILPVGNDANRQVSTLLYVSDRLGATAVAISTVTVQPVQKAAAELTAFLSTQATNLLGDAESNQNPELLVSLASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASLEKTSENLDSQ
Sbjct: 1 STATPYSWSTYVVLDAAALVPGGTYVFSLSGTDKFKAVGKATITVIANQAPSPGVFEVTPTNGVALETLFTFTGSLWSDDVDDYPLSYRFMYVVGDYTSDSQPVVIRGSSMSPSTTGILPVGNDANRQVSTLLYVSDRLGATAVAISTVTVQPVQKAAAELTAFLSTQATNLLGDAESNQNPELLVSLASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASLEKTSENLDSQ 245
BLAST of jgi.p|Trimin1|153027 vs. uniprot
Match: A0A7S4DB10_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB10_HETAK) HSP 1 Score: 117 bits (293), Expect = 2.760e-26 Identity = 73/194 (37.63%), Postives = 110/194 (56.70%), Query Frame = 1
Query: 1 STATPYSWSTYVVLDAAALVPGGTYVFSLSGTDKF--KAVGKATITVIANQAPSPGVFEVTPTNGVALETLFTFTGSLWSDDVDDYPLSYRFMYVVGDYTSDSQPVVIRGSSMSPSTTGILPVG-NDANRQVSTLLYVSDRLGATAVAISTVTVQPVQKAAAELTAFLSTQATNLLGDAESNQNPELLVSLAST 573
S++T S S VV+D L PG TY+F L+ D + G +T+TV N+AP G V+PT G L+T F+ T + W DD DDYPL+Y+F YV G+YT S + + S S + +LP+G + +N V T+ V+DR GA A +TV V P++ + L+ S +LL DAE + + E ++ ++
Sbjct: 326 SSSTTTSGSLSVVVDLTVLTPGSTYIFRLTAYDDQDPQNSGYSTVTVPVNEAPRSGKLTVSPTTGYTLDTSFSLTATNWVDDTDDYPLTYKFEYVAGNYTESSSTTALSSTQNSGSLSTLLPLGLSSSNYSVVTIAIVADRHGAKGEATATVYVLPLETSVGALSNLTS----SLLADAEDSGDAETACTVVTS 515
BLAST of jgi.p|Trimin1|153027 vs. uniprot
Match: G4ZXJ9_PHYSP (GPS domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZXJ9_PHYSP) HSP 1 Score: 95.9 bits (237), Expect = 7.870e-19 Identity = 65/166 (39.16%), Postives = 93/166 (56.02%), Query Frame = 1
Query: 55 LVPGGTYVFSLSGTDKFKAVGKATITVIANQAPSPGVFEVTPTNGVALETLFTFTGSLWSDDVDDYPLSYRF-------MYVVGDYTSDSQPVVIR-GSSMSP---------STTGILPVGNDANRQ-VSTLLYVSDRLGATAVAISTVTVQPVQKAAAELTAFLS 498
L PG TY F L D VG ++TV+ N P+ G F V+P++G A++ FT T SLWSDD DDYPLSY + ++ D +D +V + SM+P +TT + P GN A+ + V+ + ++SDRLGA A+A T+ V + A A+ T FLS
Sbjct: 4091 LTPGLTYNFRLVANDTGGNVGFGSVTVVVNSPPTSGTFTVSPSSGYAMQDSFTLTCSLWSDDKDDYPLSYSYGVLSAASFKLLQDNAADVNALVAQLRKSMTPLVATQLSPTATTKMFPPGNLADSENVTIVAFISDRLGAVALAYDTIEVLLPEAAKAQPTTFLS 4256
BLAST of jgi.p|Trimin1|153027 vs. uniprot
Match: T0Q6C3_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q6C3_SAPDV) HSP 1 Score: 94.0 bits (232), Expect = 3.580e-18 Identity = 64/171 (37.43%), Postives = 96/171 (56.14%), Query Frame = 1
Query: 55 LVPGGTYVFSLSGTDKFKAVGKATITVIANQAPSPGVFEVTPTNGVALETLFTFTGSLWSDDVDDYPLSYRFMYVVGDYTSDSQPVVIRGSSMSPSTTGILPVGNDANRQVSTLLYVSDRLG-ATAVAISTVTVQPVQKAAAELTAFLSTQATNLLGDAESNQNPELLVSL 564
L G TYVF L+GTDKF ATI+V N+ P+ G+ +PT+G L T F + W D D PL+Y F Y+VG ++ + + + ++S S T + P+G AN ++ + YV+D G AT V V P AAA+ TA LS Q+ +LL + ++ +P +V+L
Sbjct: 3374 LTAGKTYVFVLTGTDKFGQSSNATISVQINEPPTSGLLLSSPTSGTTLATSFALSSLNWVDV--DLPLTYAFKYIVGPASAGATEIALGDYALSTSFTTVFPLGGGANSTITIVAYVADAYGYATKVYSEIVVAAPTGSAAAQQTA-LSDQS-SLLASSAASTDPGQVVNL 3540
BLAST of jgi.p|Trimin1|153027 vs. uniprot
Match: A0A6G0WHI1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHI1_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 3.580e-18 Identity = 58/179 (32.40%), Postives = 95/179 (53.07%), Query Frame = 1
Query: 34 VVLDAAALVPGGTYVFSLSGTDKFKAVGKATITVIANQAPSPGVFEVTPTNGVALETLFTFTGSLWSDDVDDYPLSYRFMYVVGDYTSDSQPVVIRGSSMSPSTTGILPVGNDANRQVSTLLYVSDRLGATAVAISTVTVQPVQKAAAELTAFLSTQATNLLGDAESNQNPELLVSLAS 570
+VL A L G TYVF L+G DK+ A +V+ N+ P+ G P +G L T F + W D+ D PL + F Y+VGDY+ + V + +++ S + P G N ++ + Y++D G A++TVTV + AA+ AFL Q T+ L + S+++P +++L +
Sbjct: 3954 MVLLANTLKAGRTYVFILTGMDKYNQTSSAQTSVVMNEPPTSGTVTANPQSGSVLSTSFHLSCDNWVDE--DLPLQFSFKYIVGDYSPTATQVPLGDFALTTSFDTVFPAGGGKNNTITIVSYIADSYGYATQALTTVTVTLPKTDAAQTQAFLQNQ-TSQLANLASSKDPGQVLNLVN 4129
BLAST of jgi.p|Trimin1|153027 vs. uniprot
Match: A0A8J5J3E3_9STRA (REJ domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J3E3_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.610e-17 Identity = 67/196 (34.18%), Postives = 103/196 (52.55%), Query Frame = 1
Query: 55 LVPGGTYVFSLSGTDKFKAVGKATITVIANQAPSPGVFEVTPTNGVALETLFTFTGSLWSDDVDDYPLSYRF-------MYVVGDYTSDSQPVVIR-GSSMSP---------STTGILPVGNDANRQ-VSTLLYVSDRLGATAVAISTVTVQPVQKAAAELTAFLSTQ------ATNLLGDAESNQNPELLVSLAS 570
L G TY F L TD +VG +++VI N P+ G F V+P +G A++ FTFT SLWSDD DDYPL+Y F V+ ++DS +V + SM+P +T + P + A+ + V+ L ++SDRLGA A+A T+ V + A + F+S + +G +E N +L +++S
Sbjct: 969 LTAGLTYNFRLVATDSVGSVGFGSVSVIVNSPPASGTFVVSPQSGYAMQDTFTFTCSLWSDDADDYPLTYSFGVLSTADFEVIQKNSTDSNTLVAQLRKSMTPLVVNQLTPLATAQMFPPADMADSESVTVLAFISDRLGAVALAYDTIEVLLPEAAKSSPIVFVSEMFDANGTLKSSIGGSEDRVNAAILATVSS 1164
BLAST of jgi.p|Trimin1|153027 vs. uniprot
Match: W2QIT1_PHYPN (GPS domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QIT1_PHYPN) HSP 1 Score: 92.0 bits (227), Expect = 1.650e-17 Identity = 62/161 (38.51%), Postives = 91/161 (56.52%), Query Frame = 1
Query: 25 STYVVLDAAALVPGGTYVFSLSGTDKFKAVGKATITVIANQAPSPGVFEVTPTNGVALETLFTFTGSLWSDDVDDYPLSYRF-------MYVVGDYTSDSQPVVIR-GSSMSP---------STTGILPVGNDANRQ-VSTLLYVSDRLGATAVAISTVTV 453
ST + + LV G TY F L TD +VG +I+V+ N P+ G F V+P +G A+E FTFT SLWSDD +DYPL+Y F V+ + ++DS +V + SM+P +T + P + A+ + V+ L ++SDRLGA A+A T+ V
Sbjct: 4245 STNNAIRSFKLVAGLTYNFRLVATDTVGSVGFGSISVVVNSPPASGTFVVSPQSGYAMEDTFTFTCSLWSDDAEDYPLTYSFGVLSTADFEVIQENSTDSNNLVAQLRKSMTPLVVNQLTPLATAQMFPPADMADSESVTVLAFISDRLGAVALAYDTIEV 4405
BLAST of jgi.p|Trimin1|153027 vs. uniprot
Match: A0A6G0M1T9_9STRA (GPS domain-containing protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6G0M1T9_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 2.240e-17 Identity = 63/166 (37.95%), Postives = 92/166 (55.42%), Query Frame = 1
Query: 55 LVPGGTYVFSLSGTDKFKAVGKATITVIANQAPSPGVFEVTPTNGVALETLFTFTGSLWSDDVDDYPLSYRF-------MYVVGDYTSDSQPVVIR---------GSSMSPS-TTGILPVGNDANRQ-VSTLLYVSDRLGATAVAISTVTVQPVQKAAAELTAFLS 498
L PG TY F L D VG ++TV+ N PS G F V+P++G A++ LFT T SLWSDD DDYPLSY F + + +D +V + + +SPS TT +LP + A+ + V+ + ++SD+LGA A+A T+ V + A + T F+S
Sbjct: 4293 LTPGLTYNFRLVANDTGGNVGFGSVTVVVNSPPSSGTFTVSPSSGYAMQDLFTLTCSLWSDDKDDYPLSYAFGVLSAANFEALKNNATDVNSLVAQLRRYMTPLVATQLSPSATTKMLPPDSLADSENVTIVAFISDQLGAVALAYDTIEVLLPEAAREQPTTFIS 4458
BLAST of jgi.p|Trimin1|153027 vs. uniprot
Match: A0A329S3U0_9STRA (GPS domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S3U0_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 5.570e-17 Identity = 62/166 (37.35%), Postives = 91/166 (54.82%), Query Frame = 1
Query: 55 LVPGGTYVFSLSGTDKFKAVGKATITVIANQAPSPGVFEVTPTNGVALETLFTFTGSLWSDDVDDYPLSYRF-------MYVVGDYTSDSQPVVIR-GSSMSP---------STTGILPVGNDANRQ-VSTLLYVSDRLGATAVAISTVTVQPVQKAAAELTAFLS 498
L G TY F L TD +VG +++VI N P+ G F V+P +G A++ FTFT SLWSDD DDYPL+Y F V+ ++DS +V + SM+P +T + P + A+ + V+ L ++SDRLGA A+A T+ V + A + F+S
Sbjct: 4227 LTAGLTYNFRLVATDSVGSVGFGSVSVIVNSPPASGTFVVSPQSGYAMQDTFTFTCSLWSDDADDYPLTYSFGVLSTADFEVIQKNSTDSNTLVAQLRKSMTPLVVNQLTPLATAQMFPPADMADSESVTVLAFISDRLGAVALAYDTIEVLLPEAAKSSPIVFVS 4392
BLAST of jgi.p|Trimin1|153027 vs. uniprot
Match: D0NKT1_PHYIT (Transmembrane protein, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NKT1_PHYIT) HSP 1 Score: 82.4 bits (202), Expect = 3.240e-14 Identity = 55/163 (33.74%), Postives = 85/163 (52.15%), Query Frame = 1
Query: 25 STYVVLDAAALVPGGTYVFSLSGTDKFKAVGKATITVIANQAPSPGVFEVTPTNGVALETLFTFTGSLWSDDVDDYPLSYRF-------MYVVGDYTSDSQ-----------PVVIRGSSMSPSTTGILPVGNDA--NRQVSTLLYVSDRLGATAVAISTVTV 453
ST + + L G TY F L TD VG +++V+ N P+ G F V+P +G A++ FT T SLWSDD DD+PL+Y F ++ + ++DS P+V+ + ++P T + D + V+ L ++SDRLGA A+A T+ V
Sbjct: 4034 STNNAIRSFKLAAGLTYNFRLVATDTVGNVGFGSVSVVVNSPPASGTFVVSPQSGYAMQDTFTLTCSLWSDDADDFPLTYSFGVLSTAHFEMIEENSTDSNTLMAQLRKSMTPIVV--NQLTPLATAKMFAPEDMADSESVTVLAFISDRLGAVALAFDTIKV 4194 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|153027 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_14463 ID=mRNA_14463|Name=jgi.p|Trimin1|153027|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=735bp|location=Sequence derived from alignment at Contig_132:390558..391292- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. AGCACCGCAACCCCATACAGCTGGTCCACTTATGTGGTGCTGGATGCGGCback to top protein sequence of jgi.p|Trimin1|153027 >Trimin1|153027|gw1.132.69.1 ID=Trimin1|153027|gw1.132.69.1|Name=jgi.p|Trimin1|153027|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=245bp STATPYSWSTYVVLDAAALVPGGTYVFSLSGTDKFKAVGKATITVIANQAback to top mRNA from alignment at Contig_132:390558..391292- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_14463 ID=mRNA_14463|Name=jgi.p|Trimin1|153027|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=735bp|location=Sequence derived from alignment at Contig_132:390558..391292- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_132:390558..391292- >mRNA_14463 ID=mRNA_14463|Name=jgi.p|Trimin1|153027|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=735bp|location=Sequence derived from alignment at Contig_132:390558..391292- (Tribonema minus UTEX_B_3156 )back to top |