mRNA_14354 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|146856
Unique NamemRNA_14354
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|146856 vs. uniprot
Match: A0A836CN48_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN48_9STRA)

HSP 1 Score: 688 bits (1775), Expect = 1.500e-250
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 1
Query:    1 PNFRPEGKADARLVFTEEVQNDIWQHQNPSSCEGQQYLQLLPHNDGGLGSLLHVATVALACAMQQNAILVYHADYGARFSHGSFCAPDSSNLDCFFMPVSNCSAYVADSNLTQLPIPLVRKRRLEVPEKWRQRWAETRQTADLLYWWRAQAVSYVARLNPPTSRELITRRLAHAAAGTAPLPLPDDTVSMHVRHGDKAFEMVLRSWQEHRTRADELAMARHFEGRTLFLSTEDPEVVTEARADGTSASKCLPNPGIPAPLCTDSPRHRVLAFDDLILFSLENLLLALEATHFVGSRGSNWNRLIDELRMLWPGDLKSCCAPYAEVGCNPPQH 996
            PNFRPEGKADARLVFTEEVQNDIWQHQNPSSCEGQQYLQLLPHNDGGLGSLLHVATVALACAMQQNAILVYHADYGARFSHGSFCAPDSSNLDCFFMPVSNCSAYVADSNLTQLPIPLVRKRRLEVPEKWRQRWAETRQTADLLYWWRAQAVSYVARLNPPTSRELITRRLAHAAAGTAPLPLPDDTVSMHVRHGDKAFEMVLRSWQEHRTRADELAMARHFEGRTLFLSTEDPEVVTEARADGTSASKCLPNPGIPAPLCTDSPRHRVLAFDDLILFSLENLLLALEATHFVGSRGSNWNRLIDELRMLWPGDLKSCCAPYAEVGCNPPQH
Sbjct:    1 PNFRPEGKADARLVFTEEVQNDIWQHQNPSSCEGQQYLQLLPHNDGGLGSLLHVATVALACAMQQNAILVYHADYGARFSHGSFCAPDSSNLDCFFMPVSNCSAYVADSNLTQLPIPLVRKRRLEVPEKWRQRWAETRQTADLLYWWRAQAVSYVARLNPPTSRELITRRLAHAAAGTAPLPLPDDTVSMHVRHGDKAFEMVLRSWQEHRTRADELAMARHFEGRTLFLSTEDPEVVTEARADGTSASKCLPNPGIPAPLCTDSPRHRVLAFDDLILFSLENLLLALEATHFVGSRGSNWNRLIDELRMLWPGDLKSCCAPYAEVGCNPPQH 332          
BLAST of jgi.p|Trimin1|146856 vs. uniprot
Match: A0A835ZAN1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAN1_9STRA)

HSP 1 Score: 478 bits (1230), Expect = 9.510e-167
Identity = 235/336 (69.94%), Postives = 268/336 (79.76%), Query Frame = 1
Query:    1 PNFRPEGKADARLVFTEEVQNDIWQHQNPSSCEGQQYLQLLPHNDGGLGSLLHVATVALACAMQQNAILVYHADYGARFSHGSFCAPDSSNLDCFFMPVSNCSAYVADSNLTQLPIPLVRKRRLEVPEKWRQRWAETRQTADLLYWWRAQAVSYVARLNPPTSRELITRRLAHAAAGTAPLPLPDDTVSMHVRHGDKAFEMVLRSWQEHRTRADELAMARHFEGRTLFLSTEDPEVVTEARADGTSASKCLPNPGIPAPLCTDSPRHRVLA----FDDLILFSLENLLLALEATHFVGSRGSNWNRLIDELRMLWPGDLKSCCAPYAEVGCNPPQH 996
            P+FRP G+  AR VFT EVQ DIWQHQNP SC+G++YL+L PH  GGLGSLLHV T A+A AMQQNAILVYH DYGA  SHGSFC   S +L+CFFMP+SNCSAY+AD+ +  LP+  V +RRL+VP+KWRQRWA+TRQ  DLLYWWRAQAV+YV RLNP TSRELI+RR AHAAAGT PLPLP+DTVS+HVRHGDK  EM LRSWQEH+TRADELA AR F GRT FLSTEDPEVV EA ADGT     LP          D+     +A     DDL+LFSLENL +ALEATHF+G+RGSNWNRLIDELRM+WPGD +SCCAPYAEVGC+PPQ+
Sbjct:   40 PSFRPVGREGARPVFTAEVQADIWQHQNPPSCDGRKYLRLQPHTQGGLGSLLHVTTAAIAYAMQQNAILVYHKDYGATLSHGSFCPAHSRSLNCFFMPLSNCSAYMADAEMPGLPVYKVGRRRLDVPKKWRQRWADTRQKGDLLYWWRAQAVAYVTRLNPQTSRELISRRRAHAAAGTVPLPLPNDTVSVHVRHGDKGAEMALRSWQEHKTRADELAKARRFRGRTAFLSTEDPEVVKEAHADGTWDILVLP-------YRRDNGDFAQMAELGVSDDLVLFSLENLFIALEATHFLGTRGSNWNRLIDELRMVWPGDSRSCCAPYAEVGCDPPQN 368          
BLAST of jgi.p|Trimin1|146856 vs. uniprot
Match: A0A835YS04_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS04_9STRA)

HSP 1 Score: 286 bits (731), Expect = 6.730e-90
Identity = 170/363 (46.83%), Postives = 213/363 (58.68%), Query Frame = 1
Query:   13 PEGKADARLVFTEEVQNDIWQHQNPSSCEGQQYLQLLPHNDGGLGSLLHVATVALACAMQQNAILVYHADYGARFSHGSFCAPDSSNLDCFFMPVSNCSAYVAD--SNLT--------QLPIPLVRKRRLEVPEKWRQRWAETRQTA----DLLYWWRAQAVSYVARLNPPTSRELITRRLAHAAAGTAPLPLPDDTVSMHVRHGDKAFEMVLRSWQEHRTRADELAMARHFEGRTLFLSTEDPEVVTEARA------------------DGTSASKCLPN-----PGIPAPLCTDSPRHRVLAFDDLILFSLENLLLALEATHFVGSRGSNWNRLIDELRMLWPGDLKSCCAPYAEVGCNPP 990
            P     ARL FT EVQ DIW+HQNP +CEGQ+Y++  PH+  GLGS+L+ A+  L  AM +  I++YH   GA    GS+CA    N  C FMP SNC+AY  +  +N+T          P+P+V       P+KW QRWAET  ++    +L YWWRAQA  Y  RLN  TS+ELITRR+  AA+G APLPLP +T+S+HVRHGDK  EM L SW  H  RAD LA  + F  R ++LST+DP+VV  A                    DG     C  N     PG+      D   H   A  ++ LF++E+LLLALEATHFVG RGS+W RLIDELRM+  G  KSCC PY  V C+ P
Sbjct:   94 PADGDSARLRFTAEVQQDIWRHQNPPTCEGQRYMET-PHHGFGLGSILNRASGMLGFAMNKGVIMLYHEKLGAPNFLGSYCA-GVLNPACIFMPPSNCTAYARNPRNNVTVEKNYLDHSYPMPVV-------PDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFTRLNARTSQELITRRMRSAASGAAPLPLPPNTISVHVRHGDKRSEMKLASWNAHLARADRLAHKQGFSERFIYLSTDDPKVVHAAHMPLRDPLYSVFSLPCPELMDGLGVLPCRTNITSANPGL------DVAEHGAHA-GEIALFAVESLLLALEATHFVGQRGSSWARLIDELRMVVVGSSKSCCLPYGNVSCDLP 440          
BLAST of jgi.p|Trimin1|146856 vs. uniprot
Match: A0A835YGT7_9STRA (FUT8_N_cat domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGT7_9STRA)

HSP 1 Score: 298 bits (764), Expect = 9.270e-89
Identity = 162/342 (47.37%), Postives = 216/342 (63.16%), Query Frame = 1
Query:    4 NFRPEGKADARLV-FTEEVQNDIWQHQNPSSCEGQQYLQLLPHNDGGLGSLLHVATVALACAMQQNAILVYHADYGARFSHGSFCAPDSS-NLDCFFMPVSNCSAYVADSNLTQLPIPLVRKRRLEVPEKWRQRWAETRQTADLLYWWRAQAVSYVARLNPPTSRELITRRLAHAAAGTAPLPLPDDTVSMHVRHGDKAFEMVLRSWQEHRTRADELAMARHFEGRTLFLSTEDPEVVTEARADGTSASKCLPNP---GIPAPLCTDSPRHRVLAF-------DDLILFSLENLLLALEATHFVGSRGSNWNRLIDELRMLWPGDLKSCCAPYAEVGCNPPQ 993
            N+RP+  +D  L+ FT+EVQ DIW+HQNP SCEGQ ++   P++  GLGS+LHVAT  L  A  Q +ILV+   +G +F  G  C    + N  CFFMP SNCS +V  S +  +P  + +   ++VP+KWR RW +T QT D++YWWRAQAV+Y+ R N  T+  L  RRL  A  G APLPLP +TVS+HVRHGDK  EM   +W+EH  RA+++A AR  + R ++++TEDP V  + + +    +  LP P   G     C     H    F       D+++LFSL+ LLLALE THFVG RGSNW RLIDELRM++ G  KS   P+ E+GC PPQ
Sbjct:   82 NYRPKQLSDNPLLPFTKEVQADIWKHQNPPSCEGQSFIHQ-PNHPAGLGSVLHVATAGLGYAFNQKSILVFGEYFGQQFGSGRLCDEAGAFNSQCFFMPASNCSTFVNASTVPAVPHKM-KDYEMQVPQKWRTRWQDTNQTGDIIYWWRAQAVAYLFRFNEQTAEMLRVRRLQIARQGVAPLPLPPNTVSVHVRHGDKVNEMKTYTWEEHLVRAEDVAKARQLKERHMYVTTEDPAVALQVQENPDWTTFILPCPKLIGGHELNCRTDKTHGNPVFQDDHMFEDEMVLFSLQGLLLALEGTHFVGVRGSNWTRLIDELRMVY-GRPKSSSLPFVELGCLPPQ 420          
BLAST of jgi.p|Trimin1|146856 vs. uniprot
Match: A0A835YU43_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU43_9STRA)

HSP 1 Score: 263 bits (673), Expect = 9.700e-82
Identity = 157/335 (46.87%), Postives = 199/335 (59.40%), Query Frame = 1
Query:   19 GKADARLVFTEEVQNDIWQHQNPSSCEGQQYLQLLPHNDGGLGSLLHVATVALACAMQQNAILVYHADYGARFSHGSFCAPDSSNLDCFFMPVSNCSAYVAD----------SNLTQLPIPLVRKRRLEVPEKWRQRWAETRQTA----DLLYWWRAQAVSYVARLNPPTSRELITRRLAHAAAGTAPLPLPDDTVSMHVRHGDKAFEMVLRSWQEHRTRADELAMARHFEGRTLFLSTEDPEVVTEARA-----------------DGTSASKCLPNPGIPAPLCTDSPRHRVLAFDDLILFSLENLLLALEATHFVGSRGSNWNRLIDELRML 930
            G   ARL FT EVQ+DIW+HQNP +CEG++YL+  P++  GLGSLL+ A+  L  AM Q  I++YH + G+    GS+CA    N  C FMP SNC+AY  D          S+    P+P+V       P+KW QRWAET  ++    +L YWWRAQA  Y +RLN  TS+E+I RRL  AA G APLPLP DT+++HVRHGDK+ EM L SW++H  R D LA  R      ++LST+DP+VV  A A                 DG     C  N     P   D       A D + LF++E+LLLALEATHFVG RGS+W RLIDELRM+
Sbjct:   80 GDDSARLRFTAEVQHDIWRHQNPPTCEGRRYLET-PYHRFGLGSLLNRASGTLGFAMNQGLIMLYHEELGSPNFLGSYCA-GVLNPSCIFMPPSNCTAYARDPRNKVKIHTGSDDHSYPMPVV-------PDKWVQRWAETDMSSSGMVNLQYWWRAQAAGYFSRLNARTSQEMIARRLRSAARGAAPLPLPPDTIAVHVRHGDKSTEMKLASWKKHHARVDRLARQRGLNEHFIYLSTDDPDVVHAAHAIRERNYRVFSLPCPALMDGAGVLPCRTNSTSANP-GYDMEEDGTHA-DQIALFAVESLLLALEATHFVGQRGSSWARLIDELRMV 403          
BLAST of jgi.p|Trimin1|146856 vs. uniprot
Match: A0A836CMT9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMT9_9STRA)

HSP 1 Score: 259 bits (662), Expect = 2.590e-80
Identity = 157/352 (44.60%), Postives = 195/352 (55.40%), Query Frame = 1
Query:    1 PNFRPEGKADARLVFTEEVQNDIWQHQNPSSCEGQQYLQLLPHNDGGLGSLLHVATVALACAMQQNAILVYHADYGARFSHG---SFCAPDS-SNLDCFFMPVSNCSAYVA---DSNLTQLPI--PLVRKRRLEVPEKWRQRWAETRQTADLLYWWRAQAVSYVARLNPPTSRELITRRLAHAAAGTAPLPLPDDTVSMHVRHGDKAFEMVLRSWQEHRTRADELAMARHFEGRTLFLSTEDPEVVTEARADGTSASKCLPNPGIP-APLCTDSPRHRVLAFD------------DLILFSLENLLLALEATHFVGSRGSNWNRLIDELRMLWPGDLKSCCAPYAEVGCNPP 990
            PN+R      +RL FTEEVQ DIW HQNP SCE + ++ L      GLG L+ VA   LA AM+   ILV H  + A  + G   S+C+       DCFFMP+SNCS ++    + N    P   PLV       P KW++RWAET QT  LL WWRAQ  +Y  RLN  T+REL  RRL  AAAG APLPLP  T+S+HVRHGDK  E+ L SW +H    +  A A+ ++ R LF++T+D EV    RA     +  +     P    C +  R R    D            DL LFSL+ LL ALEATHF G RGSNW R+ID LRM+  G   S   PY +VG + P
Sbjct:   59 PNYRISDAFASRLPFTEEVQADIWAHQNPQSCENRTFV-LQGSKPAGLGYLMGVANFPLAWAMEHGHILVLHQGFAAAQAEGEQDSYCSSQQLRGWDCFFMPLSNCSDHIGKRVERNFKWAPTADPLV-------PAKWQRRWAETNQTGSLLQWWRAQTTAYATRLNARTARELALRRLRSAAAGAAPLPLPPGTISVHVRHGDKYKELELMSWGDHLGAVNAAARAQGWKERALFVTTDDSEVAAAVRAGVPGWTAYIQPCEAPYGARCAEQVRCRTTETDVNPGYATSDAAADLTLFSLQGLLTALEATHFAGQRGSNWVRVIDRLRMVMVGGAASFSTPYIDVGASLP 402          
BLAST of jgi.p|Trimin1|146856 vs. uniprot
Match: A0A835ZC10_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC10_9STRA)

HSP 1 Score: 251 bits (642), Expect = 6.430e-79
Identity = 134/282 (47.52%), Postives = 172/282 (60.99%), Query Frame = 1
Query:  151 LLHVATVALACAMQQNAILVYHADYGARFSHGSFC-APDSSNLDCFFMPVSNCSAYVADSNLTQLPIPLVRKRRLEVPEKWRQRWAETRQTADLLYWWRAQAVSYVARLNPPTSRELITRRLAHAAAGTAPLPLPDDTVSMHVRHGDKAFEMVLRSWQEHRTRADELAMARHFEGRTLFLSTEDPEVVTEARADGTSASKCLPNPGIPAPLCTDSPRHRVLAFDDLILFSLENLLLALEATHFVGSRGSNWNRLIDELRMLWPGDLKSCCAPYAEVGCNPPQ 993
            +LHVAT  L  A  Q +IL+Y  DYG  F  G  C A  + N  CFFMP SNCSA V  +    +P       R +VP+KWR RW  T QT D++YWWRAQAV+Y+ R NP T+  L  RRL  A  G APLPLP +TVS+HVRHGDK  EM   SW+EH  RA ++A AR    R ++++T+D  V  +A  +G     C        P   D  +      D+++LFSL+ LLLALE THFVG+RGSNW+RLIDELRM++ G  +     + E+GC+PPQ
Sbjct:    1 MLHVATAGLGYAFNQGSILLYGDDYGKHFGSGRLCDAAGAHNSQCFFMPASNCSATVDAAAAPAVP-QKAWDYRTQVPQKWRDRWEATNQTGDIVYWWRAQAVAYLFRFNPQTAEALSARRLQIARQGVAPLPLPLNTVSVHVRHGDKVVEMTTFSWEEHLARAQDVAEARRLAERYMYVTTDDSAVALQAELNGGHDLNCRSESATENPAFQDDHQFE----DEMVLFSLQGLLLALEGTHFVGARGSNWSRLIDELRMVY-GRPEGSALAFVELGCDPPQ 276          
BLAST of jgi.p|Trimin1|146856 vs. uniprot
Match: A0A835Z6Q9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Q9_9STRA)

HSP 1 Score: 233 bits (594), Expect = 1.500e-68
Identity = 150/351 (42.74%), Postives = 189/351 (53.85%), Query Frame = 1
Query:    1 PNFRPEGKADARLVFTEEVQNDIWQHQNPSSCEGQQYLQLLPHNDGGLGSLLHVATVALACAMQQNAILVYHADYGARFSHGSFC-APDSSNLDCFFMPVSNCSAYVADSNLTQLPIPLVRKRRLEVPEKWRQRW-AET------RQTADLLYWWRAQAVSYVARLNPPTSRELITRRLAHAAAGTAPLPLPDDTVSMHVRHGDKAFEMVLRSWQEHRTRADELAMARHF--EGRTLFLSTEDPEVVTEARADGTSASKCLPNP----GIPAPLCT---------DSPRHRVLAFDDLILFSLENLLLALEATHFVGSRGSNWNRLIDELRMLWPGDLKSCCAPYAEVGCN 984
            PNFR  G    RL  TEEVQ+DIW+ QNP SC G+  L L P +D GL + LH A  +L  AM+   +  +HA  GA    G +C A  + N  C  MP +NC+ + A        +P    +   +P KWR R+ AE       R+   L YWWRAQ  +Y+ RLN  TS EL  RR A AA G+APLPLP D  S+HVRHGDK  EM L+SW  H   A + A AR      R ++L+T+DP VV  ARA     +  LP P    G   P  T         D+     +  D++ LFSLE L++ALEATHFVG RGS+W  LID LR    G   S   PY +V C+
Sbjct:  193 PNFRLSGAPHTRLPLTEEVQDDIWRSQNPPSCAGRA-LVLHPPSDYGLSAELHWAAGSLGMAMEHGHLFSWHAATGASAFTGHYCDAAGAHNPSCLLMPPTNCTDHAAAVAAGVEIVPYKAGQNYTIPTKWRNRFEAEVPPGSPWRKVMTLNYWWRAQVATYLFRLNERTSHELTQRRRASAARGSAPLPLPLDAFSVHVRHGDKWKEMTLQSWDAHEGAARDAARARGVPESRRAVYLTTDDPTVVESARATPGWTTYVLPCPVAADGALLPCRTTDNTTNPAFDAGTEGHMHADEITLFSLEGLMVALEATHFVGQRGSSWTVLIDNLRQTLVGSDFSFNTPYVDVDCS 542          
BLAST of jgi.p|Trimin1|146856 vs. uniprot
Match: A0A836CJ51_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ51_9STRA)

HSP 1 Score: 216 bits (551), Expect = 4.000e-64
Identity = 143/350 (40.86%), Postives = 182/350 (52.00%), Query Frame = 1
Query:    1 PNFRPEGKADARLVFTEEVQNDIWQHQNPSSCEGQQYLQLLPHNDGGLGSLLHVATVALACAMQQNAILVYHADYGARFSHGSFCAPDS-SNLDCFFMPVSNCSAYVADSNLTQLPIPLVRKRRLEVPEKWRQRW---AETRQTADLLYWWRAQAVSYVARLNPPTSRELITRRLAHAAAGTAPLPLPDDTVSMHVRHGDKAFEMVLRSWQEHRTRADELAMARHFEG--RTLFLSTEDPEVVTEARADGTSASKCLPNP----GIPAPLCT------------DSPRHRVLAFDDLILFSLENLLLALEATHFVGSRGSNWNRLIDELRMLWPGDLKSCCAPYAEVGCN 984
            P FR  G    RL  TEEVQ DIW+ QNP +C G   L +   ++ GL + LH A  +L  AM+   I  +HA  G +   G +C      N  CFF+P SNCS   A +    +P  +       +P K+       +  R+   L YWWRAQ  +Y+ R N  TSRELI RR   AA G  PLPLP +T S+HVRHGDK  EM L+SW  H   AD  A AR      R ++L+T+DP VV  A A        LP P    G P P  T            DS +    A D+++LF+LE L++ALEATHFVG RGS+W  LID+LR    G   S   PY +V C+
Sbjct:   21 PYFRLSGTPQTRLPLTEEVQADIWRSQNPPACAGHA-LVVHRRSNFGLSAQLHWAAGSLGMAMEHGHIFTWHAASGTKAFMGRYCDEAGVHNPSCFFVPPSNCSDQAAAAGAAVVPYAV---HNYTIPSKFESEMPPGSPWRKVMTLNYWWRAQVATYLFRFNKRTSRELIQRRQRSAARGAPPLPLPPNTFSIHVRHGDKWKEMNLQSWDAHLHAADVAARARGVPASQRFVYLTTDDPRVVESALATHGWTVYVLPCPLQADGSPLPCRTTDNTTNPAFGISDSEQGHADA-DEIMLFALEGLMIALEATHFVGQRGSSWTVLIDDLRHTLVGSAFSFDTPYIDVDCS 365          
BLAST of jgi.p|Trimin1|146856 vs. uniprot
Match: A0A836CC71_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC71_9STRA)

HSP 1 Score: 185 bits (469), Expect = 5.730e-52
Identity = 102/224 (45.54%), Postives = 127/224 (56.70%), Query Frame = 1
Query:  376 VPEKWRQRWAETRQTADLLYWWRAQAVSYVARLNPPTSRELITRRLAHAAAGTAPLPLPDDTVSMHVRHGDKAFEMVLRSWQEHRTRADELAMARHFEGRTLFLSTEDPEVVTEARADG------------TSASKCLPNPGIPAPLCTDSPRHRVLAFD------DLILFSLENLLLALEATHFVGSRGSNWNRLIDELRMLWPGDLKSCCAPYAEVGCNPPQ 993
            VP KW++RWAET QT +LLYWWRAQ  +Y+ R N  T+REL  RRL  AA+G  PLPLP  T ++HVRHGDK  EM L SW++H    +  A    +  R L++ST+D  V  E  A G                K LP   +P     +S        D      DL L SLE+LL+ALEA HF G RGSNW RLID LR++  GD   CC PY +VG + P+
Sbjct:  138 VPAKWQRRWAETNQTMNLLYWWRAQGSAYLLRFNARTARELALRRLRAAASGAVPLPLPPGTAAVHVRHGDKFKEMALMSWRDHLAAVEAAAERERWPERRLYVSTDDAAVAAEVAAPGGVPGWTVHVLPCPEPRKRLPE-RVPCRTEANSDNPGTARIDGVSYAADLTLVSLEDLLIALEAMHFAGQRGSNWTRLIDRLRLVLAGDPVGCCTPYIDVGLSLPE 360          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|146856 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CN48_9STRA1.500e-250100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835ZAN1_9STRA9.510e-16769.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YS04_9STRA6.730e-9046.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YGT7_9STRA9.270e-8947.37FUT8_N_cat domain-containing protein n=1 Tax=Tribo... [more]
A0A835YU43_9STRA9.700e-8246.87Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CMT9_9STRA2.590e-8044.60Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZC10_9STRA6.430e-7947.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z6Q9_9STRA1.500e-6842.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CJ51_9STRA4.000e-6440.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CC71_9STRA5.730e-5245.54Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_143contigContig_143:357428..359053 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|146856|gw1.143.52.1
Max annot lvl4751|Fungi
EggNOG OGs28KCQ@1|root,2S4QB@2759|Eukaryota,3A7D3@33154|Opisthokonta,3P5FX@4751|Fungi,3R3F5@4890|Ascomycota
Evalue5.8e-39
Seed ortholog13349.G1WY00
Hectar predicted targeting categoryother localisation
TranscriptId147178
TrackFilteredModels1
ProteinId146856
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|146856gene_14354Tribonema minus UTEX_B_3156 geneContig_143 357428..359053 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_14354_1exon_14354_1Tribonema minus UTEX_B_3156 exonContig_143 357428..358161 +
exon_14354_2exon_14354_2Tribonema minus UTEX_B_3156 exonContig_143 358357..358438 +
exon_14354_3exon_14354_3Tribonema minus UTEX_B_3156 exonContig_143 358874..359053 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_14354CDS_14354Tribonema minus UTEX_B_3156 CDSContig_143 357428..358161 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|146856Trimin1|146856|gw1.143.52.1Tribonema minus UTEX_B_3156 polypeptideContig_143 357428..359053 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_14354 ID=mRNA_14354|Name=jgi.p|Trimin1|146856|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=996bp|location=Sequence derived from alignment at Contig_143:357428..359053+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CCCAACTTTCGGCCAGAGGGGAAAGCTGATGCCCGGCTAGTGTTCACCGA
GGAAGTACAGAATGACATCTGGCAGCACCAGAATCCCTCATCCTGTGAAG
GACAGCAGTACCTGCAGCTGCTCCCACATAACGACGGCGGCTTGGGCTCC
CTGTTGCATGTCGCAACTGTTGCCCTGGCGTGCGCTATGCAGCAAAACGC
CATCCTGGTATATCATGCGGATTACGGTGCCAGGTTCAGTCATGGCAGCT
TCTGTGCGCCTGACAGCAGTAATTTGGATTGCTTTTTCATGCCGGTGTCC
AACTGCTCGGCCTATGTGGCAGATTCGAACCTGACGCAGCTGCCGATACC
GTTGGTCCGCAAACGGCGCCTTGAGGTGCCCGAGAAGTGGCGACAGCGGT
GGGCGGAGACGCGGCAGACAGCGGACCTCCTGTACTGGTGGCGCGCACAG
GCGGTCTCGTATGTCGCACGCTTGAACCCGCCGACGTCGCGCGAACTCAT
CACCCGCAGACTAGCTCACGCCGCTGCAGGTACCGCGCCGCTGCCGCTGC
CTGATGATACGGTGTCGATGCATGTGAGGCATGGCGACAAGGCTTTTGAG
ATGGTGCTGCGGTCATGGCAAGAGCACAGAACACGCGCTGACGAGCTGGC
AATGGCACGCCATTTCGAGGGGCGCACCTTGTTTTTGTCGACCGAGGATC
CGGAGGTGGTGACGGAGGCGCGTGCGGATGGGACATCTGCCTCAAAATGC
CTTCCGAACCCCGGCATCCCTGCTCCTCTGTGCACTGATAGCCCGAGACA
CCGCGTGCTAGCATTTGATGATCTGATCCTATTTTCATTGGAAAATTTGC
TGCTCGCACTGGAAGCAACACATTTCGTCGGTTCACGGGGCTCAAACTGG
AATCGGTTAATAGATGAACTGCGCATGTTGTGGCCAGGTGATCTCAAGAG
CTGCTGCGCCCCTTATGCTGAGGTAGGTTGCAATCCACCGCAGCAC
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protein sequence of jgi.p|Trimin1|146856

>Trimin1|146856|gw1.143.52.1 ID=Trimin1|146856|gw1.143.52.1|Name=jgi.p|Trimin1|146856|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=332bp
PNFRPEGKADARLVFTEEVQNDIWQHQNPSSCEGQQYLQLLPHNDGGLGS
LLHVATVALACAMQQNAILVYHADYGARFSHGSFCAPDSSNLDCFFMPVS
NCSAYVADSNLTQLPIPLVRKRRLEVPEKWRQRWAETRQTADLLYWWRAQ
AVSYVARLNPPTSRELITRRLAHAAAGTAPLPLPDDTVSMHVRHGDKAFE
MVLRSWQEHRTRADELAMARHFEGRTLFLSTEDPEVVTEARADGTSASKC
LPNPGIPAPLCTDSPRHRVLAFDDLILFSLENLLLALEATHFVGSRGSNW
NRLIDELRMLWPGDLKSCCAPYAEVGCNPPQH
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mRNA from alignment at Contig_143:357428..359053+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_14354 ID=mRNA_14354|Name=jgi.p|Trimin1|146856|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1626bp|location=Sequence derived from alignment at Contig_143:357428..359053+ (Tribonema minus UTEX_B_3156 )
CCCAACTTTCGGCCAGAGGGGAAAGCTGATGCCCGGCTAGTGTTCACCGA GGAAGTACAGAATGACATCTGGCAGCACCAGAATCCCTCATCCTGTGAAG GACAGCAGTACCTGCAGCTGCTCCCACATAACGACGGCGGCTTGGGCTCC CTGTTGCATGTCGCAACTGTTGCCCTGGCGTGCGCTATGCAGCAAAACGC CATCCTGGTATATCATGCGGATTACGGTGCCAGGTTCAGTCATGGCAGCT TCTGTGCGCCTGACAGCAGTAATTTGGATTGCTTTTTCATGCCGGTGTCC AACTGCTCGGCCTATGTGGCAGATTCGAACCTGACGCAGCTGCCGATACC GTTGGTCCGCAAACGGCGCCTTGAGGTGCCCGAGAAGTGGCGACAGCGGT GGGCGGAGACGCGGCAGACAGCGGACCTCCTGTACTGGTGGCGCGCACAG GCGGTCTCGTATGTCGCACGCTTGAACCCGCCGACGTCGCGCGAACTCAT CACCCGCAGACTAGCTCACGCCGCTGCAGGTACCGCGCCGCTGCCGCTGC CTGATGATACGGTGTCGATGCATGTGAGGCATGGCGACAAGGCTTTTGAG ATGGTGCTGCGGTCATGGCAAGAGCACAGAACACGCGCTGACGAGCTGGC AATGGCACGCCATTTCGAGGGGCGCACCTTGTTTTTGTCGACCGAGGATC CGGAGGTGGTGACGGAGGCGCGTGCGGATGGGACGTGGGACATACTAGTG CTGCCATACAGCCGTGAGAACTGGATCTTAAAGCGGATGTAGGCGCTGGG GGTAAGAGCACACCGCTTTGTTGTTTGCTGCCATGCTGTGTTCACAGCTC CAGCTGTCTTCCCATTGGCTGCTGCACGCAGCAAATGGCGAACTTCTGCT GTTCAGATGAAGGTGCCACTTGAATGCAGATCTGCCTCAAAATGCCTTCC GAACCCCGGCATCCCTGCTCCTCTGTGCACTGATAGCCCGAGACACCGCG TGCTAGCATTTGTATCATGCAGCGGTCACATCAGATTCTGTTGACTTTCG TCACAATGTTTTCAATGACTCAATTTCAGCATTAAGCAGCAGTGTGCCGT GTCTCTGATGTATGCAGTGCCGGCGCCCGAACTGGCTCAAAATTTGGCCT TGCTAGGCTTCATGCACGGCGGTCGTGGCACACGATGCAACCCATAACCA TGCACCGTATCATTCAACTTGGACTTGAAGTTGCATCTTGTCACGGGAAA TCCACTGCAGCTTTCAAGATGTCTTGCTTTCGTGCGCACTGCATTGTCTT GCATTTTTGCACGCTGCTTTGTCCAAGACTTGCATTTGTGCACTTTGCTA CTGCCTAGATCCTAGAACCTTTTGATTGTATCGTGAATGACACTTGCTGA TCATCCTCCCCCCCCCCCCCCCCCCCCCCCCTCCCCTTCCCGCCAGGATG ATCTGATCCTATTTTCATTGGAAAATTTGCTGCTCGCACTGGAAGCAACA CATTTCGTCGGTTCACGGGGCTCAAACTGGAATCGGTTAATAGATGAACT GCGCATGTTGTGGCCAGGTGATCTCAAGAGCTGCTGCGCCCCTTATGCTG AGGTAGGTTGCAATCCACCGCAGCAC
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Coding sequence (CDS) from alignment at Contig_143:357428..359053+

>mRNA_14354 ID=mRNA_14354|Name=jgi.p|Trimin1|146856|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=996bp|location=Sequence derived from alignment at Contig_143:357428..359053+ (Tribonema minus UTEX_B_3156 )
CCCAACTTTCGGCCAGAGGGGAAAGCTGATGCCCGGCTAGTGTTCACCGA
GGAAGTACAGAATGACATCTGGCAGCACCAGAATCCCTCATCCTGTGAAG
GACAGCAGTACCTGCAGCTGCTCCCACATAACGACGGCGGCTTGGGCTCC
CTGTTGCATGTCGCAACTGTTGCCCTGGCGTGCGCTATGCAGCAAAACGC
CATCCTGGTATATCATGCGGATTACGGTGCCAGGTTCAGTCATGGCAGCT
TCTGTGCGCCTGACAGCAGTAATTTGGATTGCTTTTTCATGCCGGTGTCC
AACTGCTCGGCCTATGTGGCAGATTCGAACCTGACGCAGCTGCCGATACC
GTTGGTCCGCAAACGGCGCCTTGAGGTGCCCGAGAAGTGGCGACAGCGGT
GGGCGGAGACGCGGCAGACAGCGGACCTCCTGTACTGGTGGCGCGCACAG
GCGGTCTCGTATGTCGCACGCTTGAACCCGCCGACGTCGCGCGAACTCAT
CACCCGCAGACTAGCTCACGCCGCTGCAGGTACCGCGCCGCTGCCGCTGC
CTGATGATACGGTGTCGATGCATGTGAGGCATGGCGACAAGGCTTTTGAG
ATGGTGCTGCGGTCATGGCAAGAGCACAGAACACGCGCTGACGAGCTGGC
AATGGCACGCCATTTCGAGGGGCGCACCTTGTTTTTGTCGACCGAGGATC
CGGAGGTGGTGACGGAGGCGCGTGCGGATGGGACATCTGCCTCAAAATGC
CTTCCGAACCCCGGCATCCCTGCTCCTCTGTGCACTGATAGCCCGAGACA
CCGCGTGCTAGCATTTGATGATCTGATCCTATTTTCATTGGAAAATTTGC
TGCTCGCACTGGAAGCAACACATTTCGTCGGTTCACGGGGCTCAAACTGG
AATCGGTTAATAGATGAACTGCGCATGTTGTGGCCAGGTGATCTCAAGAG
CTGCTGCGCCCCTTATGCTGAGGTAGGTTGCAATCCACCGCAGCAC
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