mRNA_14330 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|353078
Unique NamemRNA_14330
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|353078 vs. uniprot
Match: A0A835Z819_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z819_9STRA)

HSP 1 Score: 2223 bits (5761), Expect = 0.000e+0
Identity = 1204/1204 (100.00%), Postives = 1204/1204 (100.00%), Query Frame = 1
Query:    1 MAATYQKHAAARDDAEPGTGKQAVADVSGIEVNNRKSRRARXXXXXXDREADDVLAAEVQQEATSTRRLEPEQMPAELYQRWIHLSNLAGSAEAVDVLQDIVRSTSGGEVRSELFHALFPFDLDGFQLEALDALGARKNVIVSAPTGSGKTVAGELAIYYALALGLRVFYTTPLKALSNQKFSDFRRRFGAERVGLLTGDSSYNREAQVCVMTTEVFRNMLYDSAAGIVGGEGAAATLGPDELKDVFAVVFDEFHYMNDRDRGTVWEESVISCPRHVLLVALSATMANVQDIAGWMDQTHGPTELVMSDFRPVPLRYWFANNRGIYPLFKDRESGPGARNGATATHAERVAMGKQGGRKGNWGAARQLPDRLKINPELEAMHQEEMHKRVAAERGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTRGVSVQREVPSYPYLVRCLARRDLLPAIVFVFSRAGCDKAAREVWGGGGSLLQAEESEVVRAKVEAFRAANPQVPFDEDRAELLTHGIAAHHAGMLPAYKSLVEELFIANLCKVVFATETLAAGVNMPARSTVISVLSKRGDTGIMPLLPSQLLQMAGRAGRRGLDVLGNVVVMRSRFEDVTDAHRLLLLPLDSIESKFRSSYSMAVNILKTRDLGSAKTLVEMSFGNYLQMKRLSPAQAAASEAEVRLETIRSKLEGLDLSEAKGYRKLWERLQSEQRIAGYLEEQEAEAEQEIVETILPLSRMGAGLLLTTGETGALVGDYPHPHGTPSGTTYEEHWCLVLKQDGSVVAAGPQHVRYIDLDDDKGLSRENALKASIMLAPAAKGVWYPPPLDELEGPVWGGAGGGKTGGALERPHMLVPSHAAVDTWDNDLLKALGGGIPTIPEPATPGHVLRQLAVVQRVREQLEAHPLHGLDNVTKEEVLNASKDISALEDQVRNGWRSELKFRQPAWDDFVSITRVLIRYGALLPEDLSQESDVEDVGSNEKLRLRSTAFGDLVGGINADNELWLALVLTSSAIKALSDVQLAGLVPAIISEYSRPDMFNLYGVSEEVSLCVEALVPLATELTTVQLENAVDLPVKLDASLGGLVESWALGCDWAELCASTSLDQGDICRLLRRTMEVLRQIALLPGVDRLVRDRARRAVNMMDRFPVSDEATFVSDKEAESAEEGEAAAEGGEGEQEEGVELALEEGVEGEAEAPEVEAGA 3612
            MAATYQKHAAARDDAEPGTGKQAVADVSGIEVNNRKSRRARXXXXXXDREADDVLAAEVQQEATSTRRLEPEQMPAELYQRWIHLSNLAGSAEAVDVLQDIVRSTSGGEVRSELFHALFPFDLDGFQLEALDALGARKNVIVSAPTGSGKTVAGELAIYYALALGLRVFYTTPLKALSNQKFSDFRRRFGAERVGLLTGDSSYNREAQVCVMTTEVFRNMLYDSAAGIVGGEGAAATLGPDELKDVFAVVFDEFHYMNDRDRGTVWEESVISCPRHVLLVALSATMANVQDIAGWMDQTHGPTELVMSDFRPVPLRYWFANNRGIYPLFKDRESGPGARNGATATHAERVAMGKQGGRKGNWGAARQLPDRLKINPELEAMHQEEMHKRVAAERGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTRGVSVQREVPSYPYLVRCLARRDLLPAIVFVFSRAGCDKAAREVWGGGGSLLQAEESEVVRAKVEAFRAANPQVPFDEDRAELLTHGIAAHHAGMLPAYKSLVEELFIANLCKVVFATETLAAGVNMPARSTVISVLSKRGDTGIMPLLPSQLLQMAGRAGRRGLDVLGNVVVMRSRFEDVTDAHRLLLLPLDSIESKFRSSYSMAVNILKTRDLGSAKTLVEMSFGNYLQMKRLSPAQAAASEAEVRLETIRSKLEGLDLSEAKGYRKLWERLQSEQRIAGYLEEQEAEAEQEIVETILPLSRMGAGLLLTTGETGALVGDYPHPHGTPSGTTYEEHWCLVLKQDGSVVAAGPQHVRYIDLDDDKGLSRENALKASIMLAPAAKGVWYPPPLDELEGPVWGGAGGGKTGGALERPHMLVPSHAAVDTWDNDLLKALGGGIPTIPEPATPGHVLRQLAVVQRVREQLEAHPLHGLDNVTKEEVLNASKDISALEDQVRNGWRSELKFRQPAWDDFVSITRVLIRYGALLPEDLSQESDVEDVGSNEKLRLRSTAFGDLVGGINADNELWLALVLTSSAIKALSDVQLAGLVPAIISEYSRPDMFNLYGVSEEVSLCVEALVPLATELTTVQLENAVDLPVKLDASLGGLVESWALGCDWAELCASTSLDQGDICRLLRRTMEVLRQIALLPGVDRLVRDRARRAVNMMDRFPVSDEATFVSDKEAESAEEGEAAAEGGEGEQEEGVELALEEGVEGEAEAPEVEAGA
Sbjct:    1 MAATYQKHAAARDDAEPGTGKQAVADVSGIEVNNRKSRRARXXXXXXDREADDVLAAEVQQEATSTRRLEPEQMPAELYQRWIHLSNLAGSAEAVDVLQDIVRSTSGGEVRSELFHALFPFDLDGFQLEALDALGARKNVIVSAPTGSGKTVAGELAIYYALALGLRVFYTTPLKALSNQKFSDFRRRFGAERVGLLTGDSSYNREAQVCVMTTEVFRNMLYDSAAGIVGGEGAAATLGPDELKDVFAVVFDEFHYMNDRDRGTVWEESVISCPRHVLLVALSATMANVQDIAGWMDQTHGPTELVMSDFRPVPLRYWFANNRGIYPLFKDRESGPGARNGATATHAERVAMGKQGGRKGNWGAARQLPDRLKINPELEAMHQEEMHKRVAAERGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTRGVSVQREVPSYPYLVRCLARRDLLPAIVFVFSRAGCDKAAREVWGGGGSLLQAEESEVVRAKVEAFRAANPQVPFDEDRAELLTHGIAAHHAGMLPAYKSLVEELFIANLCKVVFATETLAAGVNMPARSTVISVLSKRGDTGIMPLLPSQLLQMAGRAGRRGLDVLGNVVVMRSRFEDVTDAHRLLLLPLDSIESKFRSSYSMAVNILKTRDLGSAKTLVEMSFGNYLQMKRLSPAQAAASEAEVRLETIRSKLEGLDLSEAKGYRKLWERLQSEQRIAGYLEEQEAEAEQEIVETILPLSRMGAGLLLTTGETGALVGDYPHPHGTPSGTTYEEHWCLVLKQDGSVVAAGPQHVRYIDLDDDKGLSRENALKASIMLAPAAKGVWYPPPLDELEGPVWGGAGGGKTGGALERPHMLVPSHAAVDTWDNDLLKALGGGIPTIPEPATPGHVLRQLAVVQRVREQLEAHPLHGLDNVTKEEVLNASKDISALEDQVRNGWRSELKFRQPAWDDFVSITRVLIRYGALLPEDLSQESDVEDVGSNEKLRLRSTAFGDLVGGINADNELWLALVLTSSAIKALSDVQLAGLVPAIISEYSRPDMFNLYGVSEEVSLCVEALVPLATELTTVQLENAVDLPVKLDASLGGLVESWALGCDWAELCASTSLDQGDICRLLRRTMEVLRQIALLPGVDRLVRDRARRAVNMMDRFPVSDEATFVSDKEAESAEEGEAAAEGGEGEQEEGVELALEEGVEGEAEAPEVEAGA 1204          
BLAST of jgi.p|Trimin1|353078 vs. uniprot
Match: D7G373_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G373_ECTSI)

HSP 1 Score: 843 bits (2179), Expect = 2.960e-282
Identity = 535/1138 (47.01%), Postives = 685/1138 (60.19%), Query Frame = 1
Query:  196 TRRLEPEQMPA---ELYQRWIHLSNLAGSAEAVDVLQDIVRSTSGGEVRSELFHALFPFDLDGFQLEALDALGARKNVIVSAPTGSGKTVAGELAIYYALALGLRVFYTTPLKALSNQKFSDFRRRFGAERVGLLTGDSSYNREAQVCVMTTEVFRNMLYDSAAGIVGGEGAAATLGPDELKDVFAVVFDEFHYMNDRDRGTVWEESVISCPRHVLLVALSATMANVQDIAGWMDQTHGPTELVMSDFRPVPLRYWFANNRGIYPLFKDRESGPGARNGATATHAERVAMGKQGGRKGNWGAARQLPDRLKINPELEAMHQEEMHKRVAAERGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTRGVSVQREVPSYPYLVRCLARRDLLPAIVFVFSRAGCDKAAREVWGGGGSLLQAEESEVVRAKVEAFRAANPQVPFDEDRAELLTHGIAAHHAGMLPAYKSLVEELFIANLCKVVFATETLAAGVNMPARSTVISVLSKRGDTGIMPLLPSQLLQMAGRAGRRGLDVLGNVVVMRSRFEDVTDAHRLLLLPLDSIESKFRSSYSMAVNILKTRDLGSAKTLVEMSFGNYLQMKRLSPAQAAASEAEVRLETIRSKLEGLDLSEAKGYRKLWERLQSEQRIAGYLEEQEAEAEQEIVETILPLSRMGAGLLLTTGETGALVGDYP-------------HPHGTPSGTTYEEHWC-----LVLKQDGSVVAAGPQHVRYIDLDDDKGLSRENALKASIMLAPAAKGVWY-PPPLDELEGPVWGGAGGGKTGGAL--------ERPHM-------------LVPSHAAVDTWDNDLLKALGGGIPTIPEPAT---PGHVLRQLAVVQRVREQLEAHPLHGLDNVTKEEVLNASKDISALEDQVRNGWRSELKFRQPAWDDFVSITRVLIRYGALLPEDLSQESDVEDVGSNEKLRLRSTAFGDLVGGINADNELWLALVLTSSAIKALSDVQLAGLVPAIISEYSRPDMFNLYGVSEEVSLCVEALVPLATELTTVQLENAVDLPVKLDASLGGLVESWALGCDWAELCASTSLDQGDICRLLRRTMEVLRQIALLPGVDRLVRDRARRAVNMMDRFPVSDEATFV 3471
            TR +  E M A   EL   W  L  +AGSA AV +LQ IV +T  G V+ ELF ALFPF+LD FQ EAL  L  R NVIVSAPTGSGKTV GELA+         VFYTTPLKALSNQKF DFRR+FG ++VGLLTGDSS+NR+AQV VMTTEVFRNMLYDS                 EL DVFAVVFDEFHYMNDRDRGTVWEESVI+CP+ VL+VALSATM+NV +I  W++ THG + LV+SDFRPVPL                                                        L+IN EL   H+ ++   +AA+R                  XXXXXXXXXXXXXXXXX      +    +  R VPS+PYLVRCL R+DLLPAIVF+FSR GCD+AA++V    G  +Q     ++   V+ F  A                 +     G  P + +L+          VVFATETLAAGVNMPAR+TVI+ LSKR DTGI+ L PSQLLQM GRAGRRG D  G+VV+MRSRFED  +AHRLLL P+D IES+F+SSY MAV +L+TRD+ SA+ LVE SFGN+++ KR+ PAQ+ ASEA+ +L+ ++ +L+G  L+EAK YRKLWER++SE+ I  YL+ Q+ EAEQE+VETILPL+R+G+ + L  G T AL+G+                  G   G    E        L+L + G+V A  P  +R ID   + G+S   A + + M++P  +  W      +E +G     A   + G           E P +             L+PS      WD   L   G  I    E      PGH+ RQL+V+ RV EQ+E HP+H +++   E V   SK+I +LE+QVR GW++E K +QPAWD+F+++ RVL RY AL   ++S                  TAFG +VG INA+NELW+ALVLT  +I  L   +LA L+PAI++EY+RPD+F LYG SE VS  +E L P+A+EL+ +Q+   V+ PV+LD  L GLVE WA GCDW+EL ASTSLDQGD+CR+LRR ME+LRQI +LPG+  +++DRAR A + +DRFPVSD+ +++
Sbjct:  330 TREVYEEAMAALTPELRAMWTELQEVAGSASAVPLLQSIVNATPDGAVQPELFQALFPFELDPFQTEALRGLAGRNNVIVSAPTGSGKTVVGELAV---------VFYTTPLKALSNQKFQDFRRQFGEDKVGLLTGDSSFNRDAQVAVMTTEVFRNMLYDSEE-------------TGELDDVFAVVFDEFHYMNDRDRGTVWEESVINCPKTVLMVALSATMSNVGEIKDWVEHTHGASSLVVSDFRPVPLS-------------------------------------------------------LRINVELLESHENDL---LAAKR-----YSQRNDDDGRGGSXXXXXXXXXXXXXXXXXYRREARKNMRNAAYRAVPSFPYLVRCLGRKDLLPAIVFIFSRVGCDQAAKQVTTSVG--VQFFWPCILDTVVDHFLQA--------------LDWMRPARQGQRPCHPTLLRRT-------VVFATETLAAGVNMPARATVITTLSKRIDTGIVKLNPSQLLQMGGRAGRRGKDSSGSVVLMRSRFEDCIEAHRLLLSPMDGIESQFKSSYGMAVGVLRTRDMASARVLVEKSFGNFVRRKRVGPAQSRASEAQEKLDELKDQLQGTTLAEAKFYRKLWERMESEKGILAYLQAQDLEAEQEVVETILPLARLGSAITLADGRTSALLGEMAPVGATAQLLDRQSSDGGVSEGGAGGERCSSAGRYLILDRSGNVEAVLPSQMRQIDCGHEAGISATLAAELATMVSP--RSAWSCSTNKEESQGQAQAAAPPARAGLVAVLEDRFPREPPALAEEGLPANGQAISLIPSEEETKGWDASALVNAGLCILEDEEGTATRVPGHIQRQLSVMSRVAEQMENHPVHQVED--PESVARLSKEIISLEEQVRQGWKTEQKLKQPAWDEFLAVCRVLKRYDALKDAEVSTP----------------TAFGRMVGSINAENELWMALVLTRKSILQLGYTELASLMPAILNEYTRPDLFTLYGPSEGVSAFLEELAPVASELSEIQMLEQVEQPVRLDGKLCGLVEGWANGCDWSELVASTSLDQGDLCRILRRAMEMLRQIPVLPGLPAVLKDRARLAADSLDRFPVSDDTSYL 1339          
BLAST of jgi.p|Trimin1|353078 vs. uniprot
Match: A0A4D9D0G8_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0G8_9STRA)

HSP 1 Score: 752 bits (1942), Expect = 2.560e-245
Identity = 469/1095 (42.83%), Postives = 621/1095 (56.71%), Query Frame = 1
Query:  265 AGSAEAVDVLQDIVRSTSGGEVRSELFHALFPFDLDGFQLEALDALGARKNVIVSAPTGSGKTVAGELAIYYALALGLRVFYTTPLKALSNQKFSDFRRRFGAERVGLLTGDSSYNREAQVCVMTTEVFRNMLYDSAAGIVGGEGAAATLGPDELKDVFAVVFDEFHYMNDRDRGTVWEESVISCPRHVLLVALSATMANVQDIAGWMDQTHGPTELVMSDFRPVPLRYWFANNRGIYPLFKDRESGPGARNGATATHAERVAMGKQGGRKGNWGAARQLPDRLKINPELEAMHQEEMH--KRVAAERGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTRGVSVQREVPS-------YPYLVRCLARRDLLPAIVFVFSRAGCDKAAREVWGGGGSL--LQAEESEVVRAKVEAFRAANPQVPFDEDRAELLTHGIAAHHAGMLPAYKSLVEELFIANLCKVVFATETLAAGVNMPARSTVISVLSKRGDTGIMPLLPSQLLQMAGRAGRRGLDVLGNVVVMRSRFEDVTDAHRLLLLPLDSIESKFRSSYSMAVNILKTRDLGSAKTLVEMSFGNYLQMKRLSPAQAAASEAEVRL---ETIRSKLEGLDLSEAKGYRKLWERLQSEQRIAGYLEEQEAEAEQEIVETILPLSRMGAGLLLTTGETGALVGDYPHPHGTPSGTTYEEHWCLVLKQDGSVVAAGPQHVRYIDLDDDKGLSRENALKASIMLAPAAKGVWYPPPLDELEGPVWGGAGG-GKTGGALERPHMLVPSHAAVDTWDNDLLKAL----GGGIPTIPEPATPGHVLRQLAVVQRVREQLEAHPLHGLDNVTKEEVLNASKDISALEDQVRNGWRSELKFRQPAWDDFVSITRVLIRYGALLPEDLSQESDVEDVGS---------NEKLRLRSTAFGDLVGGINADNELWLALVLTSSAIKALSDVQLAGLVPAIISEYSRPDMFNLYGVSEEVSLCVEALVPLATELTTVQLENAVDLPVKLDASLGGLVESWALGCDWAELCASTSLDQGDICRLLRRTMEVLRQIALLPG--VDRLVRDRARRAVNMMDRFPVSDE 3459
            AG+ E + +L++ V +T  GEV+ E F A+FPF LD FQL ALDALG R+NV+VSAPTGSGKTVAGELAIYYALAL LRV+YTTPLKALSNQKF+DF R+FG ERVGLLTGD++ NR AQV +MTTEV+RNMLY   AG              EL  VFAVVFDEFHYMND +RGTVWEESVI  P H+L VALSAT+ANV  +AGW+   HGPT  V+S FRPVPL+Y+F +N GIY LF D ++GPGA  G T T   + A+G   G             R                  K++A    P                                          G    +  P        Y  LV  L RRDLLPAIVF+FSRAGCD+AA EV G    L  L   E + ++ ++ AFR ANPQVP ++++  LL  G+A HHAG+LP YK+LVEELF  NL +VVFATETLAAGVNMPAR+TVIS LSK+     + L PSQLLQMAGRAGRRG D +G+VV+MRSR ED  DA  LL  P+DSI S FRSSY+M VNIL+TRDL S K LVE SFGNYL+      A +   E EV +   + ++ +L G+D  E + Y  L E+L    R    L+ + A+ E++ V+ +L   R+GAGLLL  G T AL+G+   PH     T+ + +  + L Q+G +VA     +R ++ + D GL  E A + S++L    +G           G +W  AGG G            V       + +   L A     G  +P++P P     ++RQ A+V  ++EQ+   PL GL       +L    ++  +E +++   +     RQ  W+DF++   +L  YGAL+     + S      S         +    L  +  G L+G + A+NELW +LVL S  +  +  V L G++ +++++ S+ ++   Y  SE   L +E L P+  EL   Q    +D P  LD  L G+ + W  G  W EL  +TSLDQGD+CR +R+ ++ LRQI +LP   V   +++ AR A + MDRFPVSD+
Sbjct:  136 AGTPEVLALLKEAVAATGTGEVKREFFKAIFPFPLDDFQLAALDALGGRENVVVSAPTGSGKTVAGELAIYYALALDLRVYYTTPLKALSNQKFADFCRQFGPERVGLLTGDTNINRGAQVTIMTTEVYRNMLYTGDAG--------------ELDQVFAVVFDEFHYMNDPERGTVWEESVILSPPHILFVALSATIANVGQVAGWISTVHGPTRTVLSHFRPVPLKYYFIDNEGIYRLFDDDDAGPGAPKGLT-TLVRQSAVGMGAGXXXXXXXXXXXXKRXXXXXXXXXXXXXXXXXKKKIAMVEAPQPVNDFLRRRALRERRLLAESAGIGGREGKGSRSMKGGA---GFGKGKRPPDGIRFTAWYRDLVDALNRRDLLPAIVFIFSRAGCDRAAAEVGGIASKLGLLSHAEKKQIKDRLSAFRLANPQVPLEKEKVRLLLCGLATHHAGLLPVYKALVEELFNENLIRVVFATETLAAGVNMPARATVISTLSKKIGKVTINLQPSQLLQMAGRAGRRGKDTMGHVVLMRSRSEDALDAFNLLCAPVDSIRSHFRSSYAMVVNILRTRDLESCKLLVERSFGNYLK------AYSLGEEQEVDIANRDELKGRLGGVDAGELRMYEDLQEKLMKATRAERNLKREAAKLEEKYVKAVLGAVRLGAGLLLRDGRTLALIGEATLPHPL---TSTQLNLYVGLSQNGKLVAVAIGDIRSVEAEKD-GLDVETAFQISLLLEGTGQG-----------GLLWRPAGGSGXXXXXXXXTLTFVAEPVDQQSQEAQDLAAYLLEHGQRVPSLPLPMPSPDLVRQQALVASLQEQIALSPLSGLGEAASASLLAVRNELERVERRIKKREKMLRGVRQKEWEDFLAAVDLLEEYGALVDTHQQRVSTATSPPSAPXXXXSSLSPSRALVPSGLGQLLGTVRAENELWASLVLLSDGLADMDAVDLVGVMSSLVNDISKSEVKVKYTASEAAFLHLERLEPIREELLMAQKARGLDFPCPLDPLLAGVAQCWLAGFSWRELVETTSLDQGDVCRHVRKVIDALRQIPVLPKGLVPERLKNTAREAADAMDRFPVSDD 1191          
BLAST of jgi.p|Trimin1|353078 vs. uniprot
Match: A0A7S2DG78_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DG78_9STRA)

HSP 1 Score: 701 bits (1808), Expect = 1.730e-230
Identity = 454/1119 (40.57%), Postives = 631/1119 (56.39%), Query Frame = 1
Query:  253 LSNLAGSAEAVDVLQDIVRSTSGGEVRSELFHALFPFDLDGFQLEALDALGARKNVIVSAPTGSGKTVAGELAIYYALALGLRVFYTTPLKALSNQKFSDFRRRFGAERVGLLTGDSSYNREAQVCVMTTEVFRNMLYDSAAGIVGGEGAAATLGPDELKDVFAVVFDEFHYMNDRDRGTVWEESVISCPRHVLLVALSATMANVQDIAGWMDQTHGPTELVMSDFRPVPLRYWFANNRGIYPLFKDRESGPGARNGATATHAERVAMGKQGGRKGNWGAARQLPDRLKINPEL--EAMHQEEMHKRVAAERGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTRGVSVQREVPSYPYLVRCLARRDLLPAIVFVFSRAGCDKAAREVWGG-----GGSLLQAEESEVVRAKVEAF-RAANPQVPF--DEDRAELLTHGIAAHHAGMLPAYKSLVEELFIANLCKVVFATETLAAGVNMPARSTVISVLSKRGDTGIMPLLPSQLLQMAGRAGRRGLDVLGNVVVMRSRFEDVTDAHRLLLLPLDSIESKFRSSYSMAVNILKTRDLGSAKTLVEMSFGNYLQMKRLSPAQAAASEA------EVRLETIRSKLEGLDLSEAKGYRKLWERLQSEQRIAGYLEEQEAEAEQEIVETILPLSRMGAGLLLT-TGETGALVGDYPHPH--GTPSGTTYEEHWCLVLKQDG--SVVAAGPQHVRYIDLDDDKGLSRENALKASIMLAPAAKGVWYPPPLDELEGPVWGGAGGGKTGGALERPHMLVPSHAAVDTWDNDLLKALGGGIPTI-PEPATPGHVLRQLAVVQRVREQLEAHPLHGL---DNVTKEEVLNASKDISALEDQVRNGWRSELKFRQ----------PAWDDFVSITRVLIRYGALLPEDLSQESDVEDVGSNEKLRLRSTAFGDLVGGINADNELWLALVLTSSAIKALSDVQLAGLVPAIISEYSRPDMFNLYGVSEEVSLCVEALVPLATELTTVQLENAVDLPVKLDASLGGLVESWALGC-DWAELCASTSLDQGDICRLLRRTMEVLRQIALLPGVDRLVRDRARRAVNMMDRFPVSDEATFVSDKEAESAEE 3501
            L  +AG+ + V+VLQ+I + +  G +  ELF ALF FDLD FQLEAL ALG R++V+VSAPTGSGKTVAGELAI+YALALGL+V YTTPLKALSNQKF DFRR++GA RVGLLTGDS  NREA V VMTTEVFRNMLYD                 + ++DVFAVV DE HYMND  RGTVWEES+IS P+ +L+V LSAT++N +DI GW +  HGPT+LV +DFRPVPLRY + +N+GI PLF+D ++GPG R       A+++   K+            L   L++NP L  E   Q+   +  ++ RG                                               Q++VPSYPY+ RCLAR+DLLPAIVF+FSR GC++AA +V        G  L +A+ + +   +++AF R    Q  F   E+R  L   G+  HHAGMLP  K+LVE+LF A L K+ FATETLAAG+NMPAR+TVIS LSKRGD GI PL  +Q+LQMAGRAGRRG+D  G  V+++SR +D      LLL P+++I S FR SY M   +L+   L  A+ L + SFG Y+Q   L  A A  S+       E+++E +R  +    L+E K Y K  ER+++ +RI GYL  Q A  E +  E +LP +R GA L+L  + +  A +G   H    G    +  +     VL       V+   P+ + ++DL++  GL   +A +    +    +  W   P                      RP       A  +  + ++L+     +P++ PE    G + +Q A V+R +E+  A     L   ++   E ++  ++++  +E  VR   +   K ++            W+DF+++  VL R+ A+              G N     + T  G LVG  N+DNELWLAL+LTS  ++ LS  +LA L+ A++ +Y+RPD F  +G S  V++  E+L  LA  L   Q+E  VD PV+L  S  GLVESWA G   W +L +STS++QGD+C +LRRTMEVLR +  +  +   VRD AR A + M+R P+SD  T++  ++  SAE+
Sbjct:  106 LKAVAGTTQVVEVLQEIAQESPTGALPDELFRALFSFDLDSFQLEALQALGTRRSVVVSAPTGSGKTVAGELAIWYALALGLKVMYTTPLKALSNQKFRDFRRQYGAHRVGLLTGDSGVNREAPVLVMTTEVFRNMLYDDL---------------NMVQDVFAVVLDELHYMNDPSRGTVWEESIISAPKSLLIVGLSATVSNAKDIVGWFEHVHGPTKLVTTDFRPVPLRYLYGSNKGISPLFRDPDAGPGGR-------AQKLDSKKK------------LKRALELNPALLDEDSEQQFGGQGSSSWRGDVTVGGNSKLAYAARRGGNENRRP-----------------------QQKVPSYPYVARCLARKDLLPAIVFIFSRLGCERAANDVANSLRSDYGLGLSRADTARITE-RLDAFDRRVGDQAEFTLSEERRLLFLKGLGVHHAGMLPLEKTLVEDLFSAGLLKICFATETLAAGINMPARTTVISTLSKRGDNGIGPLSVAQVLQMAGRAGRRGMDQEGAAVILKSRSDDAHSGRDLLLKPIEAIVSHFRPSYGMVAKLLRQYTLAEAEELTKRSFGTYVQ--ELESASAEGSDGSRLAKLEIKMEDLRQSVAPYTLTEIKDYTKASERVEAAERILGYLIAQTAANEAKTFEALLPFARHGAALILRPSSQASAALGVTVHAALLGVRFSSDVDISAVTVLTAPPHCEVLEVQPEDIAHLDLEEGVGLPPADAREMFATMEALPRDKWVQQPSGRF------------------RP-------ALSEGVNLEVLRVGSKVVPSVEPEYLESGEIAKQRAKVKR-QERRRARKREVLALSEHTDLEALMKDAEELDKIEVSVRRLQKRLAKQKKRREKQVEAGSQVWEDFLAMRDVLERFSAI-------------DGDN-----KPTDLGLLVGSANSDNELWLALILTSPCVRRLSAPELASLISAVMIQYTRPDTFVAFGPSAAVTIAAESLRELAETLYDAQVEFDVDCPVQLAGSYAGLVESWASGLVTWNQLTSSTSMNQGDVCTMLRRTMEVLRSMTSIAALPNSVRDNARTAADAMNRAPLSD-VTYLDRRQDSSAED 1119          
BLAST of jgi.p|Trimin1|353078 vs. uniprot
Match: A0A0G4EJS4_VITBC (Uncharacterized protein n=5 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJS4_VITBC)

HSP 1 Score: 635 bits (1638), Expect = 2.850e-204
Identity = 442/1129 (39.15%), Postives = 600/1129 (53.14%), Query Frame = 1
Query:  253 LSNLAGSAEAVDVLQDIVRSTSGGEVRS-----ELFHALFPFDLDGFQLEALDALGARKNVIVSAPTGSGKTVAGELAIYYALALGLRVFYTTPLKALSNQKFSDFRRRFGAERVGLLTGDSSYNREAQVCVMTTEVFRNMLYDSAAGIVGGEGAAATLGPDELKDVFAVVFDEFHYMNDRDRGTVWEESVISCPRHVLLVALSATMANVQDIAGWMDQTHGPTELVMSDFRPVPLRYWFANNRGIYPLFKDRESGPGARNGATATHAERVAMGKQ-------GGRKGNWGAA----RQLPDRLKINPELEAMHQEEMHKRVAAERGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTRGVS--------VQREVPSYPYLVRCLARRDLLPAIVFVFSRAGCDKAAREVWGGGGSLLQAEESEVVRAKVEAFRAANPQVPFDEDRAELLTHGIAAHHAGMLPAYKSLVEELFIANLCKVVFATETLAAGVNMPARSTVISVLSKRGDTGIMPLLPSQLLQMAGRAGRRGLDVLGNVVVMRSRFEDVTDAHRLLLLPLDSIESKFRSSYSMAVNILKTRDLGSAKTLVEMSFGNYLQMKR---------LSPAQAAASEAEVRLETIRSKLE--GLDLSEAKGYRKLWERLQSEQRIAGYLEEQEAEAEQEIVETILPLSRMGAGLLLTTGETGALVGDYPHPHGTP---SGTTYEEHWCLVLKQDGSVVAAGPQHVRYIDLDDDKGLSRENALKASIMLAPAAKGVWYPPPL--DELEGPVWGGAGGGKTGGALERPHMLVPSHAAVDTWDNDLLKALGGGIPTIPEPATPGHVLRQLAVVQRVREQLEAHPLHGLDNVTKEEVLNASKDISALEDQVRNGWRS-------ELK-----FRQPAWDDFVSITRVLIRYGALLPEDLSQESDVEDVGSNEKLRLRSTAFGDLVGGINADNELWLA-LVLTSSAIKALSDVQLAGLVPAIISEYSRPDMFNLYGVSEEVSLCVEALVPLATELTTVQLENAVDLPVKLDASLGGLVESWALGCDWAELCASTSLDQGDICRLLRRTMEVLRQIALLPG-------VDRLVRDRARRAVNMMDRFPVSDE 3459
            +  +AGS  A+++L+ ++ S +G +  +     EL  ALFPF LD FQ+EAL ++   +NVIVSAPTGSGKTV  E+AI++ALA G +VFYT+PLKALSNQKFSDF++ +G E VGLLTGD   NREA V VMTTEVFRN+LY  A      E   + +      +  +V+FDEFHY+ND  RGTVWEE VI+CP+H+ +V LSATMAN  D+  W+   HGPT+LV+S+ RPVPLRY FA N+G+YPLF+D E+GPGARNG      E   M  +       GG + + G      +     + +NP  E + ++ +   V   R                XXXXXXXXXXX              + R +            E P+   LV  + ++ LLPAI+F+FSR+GCD +AR +      LL   E + V+AK+  F   NP++  +  R  LL  GI +HHAG+LP YK L+EELF ANL KV+FATETLAAGVNMPAR+T I+VL K G  G+  L  SQLLQMAGRAGRRG D  G+VV++RS   D  +A   LL PLDSI+S+FR +Y +A N+L+ RDL  ++ L+E SFG +LQ +R         L PA A     + R+   R +L   G+D++E   YR+ ++RLQ+E+     +           V  +LP  R G  + L  GE GA VG        P   +G        +VL   G +V A P  +  +D     GL   +A      +A     VW        E +GPVWG    G     LE P        A+     DL + +G  +                      +  LE   +H      +++VL    D+ ALE Q++ G RS       ELK       +P W +F+++ RVL ++GAL  E +                   T+FG LVG +NA NELWL  +V     I  L+  Q AGL+ A+  ++SR         S  +   V  L   A  L   Q    +DL + +D +   LVE+WA G  W EL A T+L+QGD+C L+RRT EVLRQ++ LP        V   V + A  AV  +DR+PV +E
Sbjct:   10 IRRVAGSPAAINLLEAVITSRAGSDYLTNGEMEELMKALFPFTLDAFQVEALRSILKSRNVIVSAPTGSGKTVISEMAIWFALARGRKVFYTSPLKALSNQKFSDFQQIYGEETVGLLTGDVVRNREAPVLVMTTEVFRNILYGEAIR----EDEYSYVPSKLTGETVSVIFDEFHYINDPSRGTVWEECVINCPKHINIVGLSATMANPMDLKDWLAGVHGPTDLVVSEHRPVPLRYMFATNKGLYPLFRDAEAGPGARNGVPLLEGEEEDMAAEEDILELAGGLRASEGKIITPKKPRAPLIPLNPVFEDLRKDTIRSLVKRHRPGIEARLRRQSNNGGRXXXXXXXXXXXMSYDDDDVDQFEGRKERSLQSLVSAKQIADAETPTLSKLVSQMRKKQLLPAIIFMFSRSGCDSSARRLAADSMELLSEAEKQAVQAKLREFAQENPELLIEPWRIGLLRKGIGSHHAGLLPLYKILLEELFNANLIKVLFATETLAAGVNMPARTTAITVLRKYGSEGLTRLSTSQLLQMAGRAGRRGKDHEGSVVLIRSDRTDAREAAMTLLAPLDSIKSQFRITYGLATNVLRVRDLSKSRELIEKSFGVFLQARRREAEGRMEILDPAVA-----KERINDTRQRLREMGVDMNELDIYRRAFQRLQAEKDWLSTVRTSAEADRAAAVSKMLPTFRKGGAVELINGEVGAFVGLLDQQFRPPQLSTGALARAPLAIVLTTTGQLVVACPNAIVNLDPRSQVGLPYPDARTVVDTMA-----VWLNQQQRQGEGDGPVWGEVLPGLYW--LEMPDEPTDRQGAILY---DLCEEVGSEVVPPAAAVQXXXXXXXXXXXXXAQRNLEEAAIHT--RTDRQQVLRMGLDLLALEKQLKRGNRSARTAQLNELKEAYGSLTRPPWQEFLAVGRVLAKWGALTDEFVP------------------TSFGSLVGYLNAANELWLGHVVCWEPVIDRLNPSQFAGLIHAVTKDFSRKASDIKVRPSSALMDAVSELEDHAERLREDQENELIDLSIPVDINTASLVEAWADGMSWEELTARTNLEQGDLCSLIRRTAEVLRQLSSLPHGYIRDRVVSAQVPELAAAAVRRIDRYPVREE 1099          
BLAST of jgi.p|Trimin1|353078 vs. uniprot
Match: A0A7S3E935_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E935_9RHOD)

HSP 1 Score: 617 bits (1591), Expect = 1.890e-197
Identity = 421/1126 (37.39%), Postives = 592/1126 (52.58%), Query Frame = 1
Query:  241 RWI-HLSNLAGSAEAVDVLQDIVRSTSGG-----EVRSELFHALFPFDLDGFQLEALDALGARKNVIVSAPTGSGKTVAGELAIYYALALGLRVFYTTPLKALSNQKFSDFRRRFGAERVGLLTGDSSYNREAQVCVMTTEVFRNMLYDSAAGIVGGEGAAATLGPDELKDVFAVVFDEFHYMNDRDRGTVWEESVISCPRHVLLVALSATMANVQDIAGWMDQTHGPTELVMSDFRPVPLRYWFANNRGIYPLFKDRESGPGARNGATATHAERVAMGKQGGRKGNWGAARQLPDRLKINPELEAMHQEEMHKRVAAERGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTRGVSVQREVPSYPYLVRCLARRDLLPAIVFVFSRAGCDKAAREVWGGGGS-LLQAEESEVVRAKVEAFRAANPQVPFDEDRAELLTHGIAAHHAGMLPAYKSLVEELFIANLCKVVFATETLAAGVNMPARSTVISVLSKR-GDTGIMPLLPSQLLQMAGRAGRRGLDVLGNVVVMRSRFEDVTDAHRLLLLPLDSIESKFRSSYSMAVNILKTRDLGSAKTLVEMSFGNYLQMK----RLSPAQAAASEAEVRLETIRSKLEGLDLSEAKGYRKLWERLQSEQRIAGYLEE-----QEAEAEQEIVETILPLSRMGAGLLLTTG--------------ETGALVG----------DYPHPHGTPSGTTYEEHWCLVLKQDGSVVAAGPQHVRYIDLDDDKGLSRENALKASIMLAPAAKGVWYPPPLDELEGPVWGGAGGGKTGGALERPHMLVPSHAAVDTWDNDLLKALGGGIPTIPEPATPGHVLRQLAVVQRVREQLEAHPLHGLDNVTKEEVLNASKDISALE-----DQVRNGWRSELKF---RQPAWDDFVSITRVLIRYGALLPEDLSQESDVEDVGSNEKLRLRSTAFGDLVGGINADNELWLALVLTSSAIKALSDVQLAGLVPAIISEYSRPDMFNLYGVSEEVSLCVEALVPLATELTTVQLENAVDLPVKLDASLGGLVESWALGCDWAELCASTSLDQGDICRLLRRTMEVLRQIALLPGVDRLVRDRARRAVNMMDRFPVSDEATFV 3471
            RW+  +S +AG  EA  VL+D       G     E + +L  + F F LD FQL+A+ AL   ++ +V+APTGSGKTV GE A+Y ALA GLRVFYTTPLKALSNQK+SDF+++FGA RVGLLTGD S NR+A + VMTTEV+RNMLY S +G        + +GP  + +++AVVFDEFHYMNDR+RGTVWEESVI  P+  LLVALSATM NV ++  W  + HGPTELV+S FRPVPL + F N  G++ L   R   PG                        +G    +  ++  N  L+A      H+ +A +                                                  +EVPSY YL+RCL +R +LPAIVF+FSR GCD+AA  +  G  S LL  EE+ +V  KV  F  A+P +   ED+  L   GI++HHAG+LP +K++VEELF   L KVVFATETLAAG+NMPAR+TVIS LSKR G  G + L  S++ QMAGRAGRRG D  G  V +RS+FE    A+ ++   ++++ S F +++ M +N+LK RDL  +K LVE SFG +L  K    RL   +   S+AE  +E  +  LE   L E     KL  RL++EQ++   L +     Q A+ EQ     ILP   +G   ++                 ET    G          +Y    G        E    VL Q   +   G +H  ++D++ +        LK            W     +E++   W      K      R H    S   +    +    AL   +P I  P  PGH+L Q  +++ VR++L  + L+  D   + +++ A K +  L+     +Q+R+  R   K     +  W  F+S   VL  +G L     +Q+ +V ++GS             L   + + NELW+++VL S +I  +   QLAGL+ A+++E +R D    +    E    V+ + PL + L   Q +  +D+ V LD S  G+VE+WA G +W+EL   T+L +GDICR LRR M++LRQI  LP +   ++  ARRA+N+MDRFPV+D+ T+V
Sbjct:   38 RWLPEVSQVAGKPEAAFVLRDAWAGVPDGGSLSAEDKVDLTASAFSFPLDDFQLKAIRALARSESAVVAAPTGSGKTVIGEAAVYLALAQGLRVFYTTPLKALSNQKYSDFKKQFGASRVGLLTGDVSANRDADILVMTTEVYRNMLYASESGF-----EVSGVGPSMMDNIYAVVFDEFHYMNDRERGTVWEESVIISPKRTLLVALSATMRNVDEVRAWFSEVHGPTELVVSSFRPVPLDFGFCNRNGLFTLTSQR---PG------------------------YGGRNMINPKVCSNDVLKAAKMRVEHRGIAGDWDEDVRKGKKPRRGNRKASPAEIAKEIDYMFEEGMKKGRMLKVMNARPSNQEVPSYAYLIRCLRKRSMLPAIVFIFSRDGCDRAAGMIAEGEHSDLLTKEEAALVDEKVSEFENAHPGL-IGEDKLRLARKGISSHHAGLLPIWKAVVEELFQDGLIKVVFATETLAAGINMPARTTVISALSKRAGAEGTVELSTSEVFQMAGRAGRRGKDKRGTCVFVRSQFEGAETAYNIINQEVEALSSTFAATFGMVLNLLKRRDLDGSKELVEKSFGAFLMRKGRQERLG-GRGTMSDAETFVEA-KKLLETAPLDEVSRLAKLSNRLRTEQKVLKKLAQINLLNQIADREQ-----ILPFVPVGTKAIIVQKDADTTCLNVQKVELETHLFQGRPDSLWKGLVEYAVVLGNVEVDPESEELTAVLTQSNEIRLLGNKHFVHVDVEGE-------TLK------------W-----EEVDPGEW------KARFVPSRGHFEFSSTDQMYYAGSSESSALADLVPEISFPPVPGHLLAQKDLMEGVRQKLSENLLY--DRKNRNDLVKAFKAVKKLKKQFTVEQLRSVERKMDKLSVQEESNWKVFMSAAEVLQEFGFL-----TQDYEVTELGS-------------LGASLRSSNELWISMVLLSDSISKMQPPQLAGLISALLAEGARRDQVITFQADPETLEAVDEIRPLYSNLEAAQRKKKLDIVVTLDESDAGMVEAWAKGIEWSELMRGTNLQEGDICRRLRRVMDMLRQIPRLPILSEAIKLNARRAINLMDRFPVADDVTYV 1073          
BLAST of jgi.p|Trimin1|353078 vs. uniprot
Match: A0A7S0ZII0_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZII0_9RHOD)

HSP 1 Score: 613 bits (1580), Expect = 9.970e-196
Identity = 428/1118 (38.28%), Postives = 599/1118 (53.58%), Query Frame = 1
Query:  253 LSNLAGSAEAVDVLQDIVRSTSG-GEVRSELFHALFPFDLDGFQLEALDALGARKNVIVSAPTGSGKTVAGELAIYYALALGLRVFYTTPLKALSNQKFSDFRRRFGAERVGLLTGDSSYNREAQVCVMTTEVFRNMLYDSAAG-IVGGEGAAATLGPDELKDVFAVVFDEFHYMNDRDRGTVWEESVISCPRHVLLVALSATMANVQDIAGWMDQTHGPTELVMSDFRPVPLRYWFANNRGIYPLFKDRESGPGARNGATATHAERVAMGKQGGRKGNWGAARQLPDRLKINPELEAMHQEEMHKRVAAERGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTRGVSVQREVPSYPYLVRCLARRDLLPAIVFVFSRAGCDKAAREVWGGGGSLLQAEESEVVRAKVEAFRAANPQVPFDEDRAELLTHGIAAHHAGMLPAYKSLVEELFIANLCKVVFATETLAAGVNMPARSTVISVLSKR-GDTGIMPLLPSQLLQMAGRAGRRGLDVLGNVVVMRSRFEDVTDAHRLLLLPLDSIESKFRSSYSMAVNILKTRDLGSAKTLVEMSFGNYLQMKRLSPAQAAASEAEVRLETI-------RSKLEGLDLSEAKGYRKLWERLQSEQRIAGYLEEQEAEAEQEIVETILPLSRMGAGLLLTT----------GETGAL-----VGDYP------------HPHGTPSGTTYEEHWCLVLKQDGSVVAAGPQHVRYIDLDDDKGLSREN-ALKASIMLAPAAKGVWYPPPLDELEGPVWGGAGGGKTGGALERPHMLVPSHAAVDTWDNDLLKALGGGIPTIPEPATPGHVLRQLAVVQRVREQLEAHPLHGLDNVTKEEVLNASKDISALEDQVRNGWRSELKFRQPA---WDDFVSITRVLIRYGALLPEDLSQESDVEDVGSNEKLRLRSTAFGDLVGGINADNELWLALVLTSSAIKALSDVQLAGLVPAIISEYS-RPDMFNLYGVSEEV-SLCVEALVPLATELTTVQLENAVDLPVKLDASLGGLVESWALGCDWAELCASTSLDQGDICRLLRRTMEVLRQIALLPGVDRLVRDRARRAVNMMDRFPVSDEATFVSD 3477
            +   AG+ + ++ LQ      S      S L  + FPF LD FQ++A++A+   K+VI+SAPTGSGKT+ GE AI  ALA G+R FYTTPLKALSNQKF DF+ +FGA+RVGLLTGDSS NR+A V VMTTE++RNMLY + +G +VGG   A  +    +  V+AVV DEFHYMNDRDRGTVWEESVI  P H++LVALSATMANV+D+  WM   HGPTEL++SD+RPVPL + F   +G+ PLF  R S               V  G++ G       A+ L D L +  EL +   ++    V+ ++G                                         +R  +  RE PS+P++VRCL R++LLPAI+F+FSR GCD+AA E+     +L+ ++E  V++ +V  FR  NP V   EDR EL  +GIA+HHAGMLP +KS VE LF   L KVVFATETLAAG+NMPAR+TVIS LSKR G+ G + L  S++LQMAGRAGRRG DV+G+ +++RS FE    A+ L+   LDS+ESKF  SY M +N+LK R +  +K L+E SFG+YL       A    S+ +V+ E +       +  LE +   +   Y+K  ER ++E+R   YLEEQ  E   + V+  L  + +G  LLL +          G++  L       D                 G PS   Y+    L L      +A+ P +V   D +    +S  + A      L      V   P  DE     W  AG         R             +   + +     +  IP   +   +L Q + V   +EQL++  +H   +  + E++ A +  S L ++  N    + +   P+   W+DF+S+ R+L  +G               +  N K+    T+ G L   +  +NE+WL+ VLTS  I+ L   Q A  + A+IS+   R D++  + +S E+ S+CV+ L  LA  +   Q +N +     +D     L E+WA G  W EL + TSL +GDICR LRR M+ LRQI  LP V   +R  ARRA+ +MDR+PVSD+ T+  D
Sbjct:   79 IQQTAGTPQVIEFLQYASSHYSAKSNEMSILIQSAFPFKLDDFQIQAVNAMTNAKSVIISAPTGSGKTLIGEAAILLALASGMRAFYTTPLKALSNQKFYDFQAQFGADRVGLLTGDSSINRDADVVVMTTEIYRNMLYAAESGDMVGGVLGAVGV----VDSVYAVVLDEFHYMNDRDRGTVWEESVIISPPHIVLVALSATMANVKDVQNWMTHVHGPTELIVSDYRPVPLSFGFCRRQGLEPLFDTRRS---------------VKSGRKNGTSRPLINAKLLDDPLTM--ELISKAVKQRVGGVSRKKG-----------------------GLGSVMDNLDEVLTIAQNSRRRASYRETPSFPFVVRCLRRKNLLPAIIFLFSRDGCDRAAMEILDEQEALVNSQEKSVLQERVAQFRRENPGVVV-EDRLELARNGIASHHAGMLPLWKSFVESLFQDGLIKVVFATETLAAGINMPARTTVISALSKRRGEEGHVLLSTSEVLQMAGRAGRRGKDVVGHSIILRSPFEGPLHAYHLVTKGLDSLESKFTPSYGMVLNLLKRRSIEDSKLLLEKSFGSYLASSLSGVADEMKSKKQVKREKMIELMKYCKELLESVKTKDLVMYQKTRERFKAERRSLVYLEEQRREERMKEVDEKLAFASIGTSLLLQSLPRKKRRLKSGKSDELDFYIEAEDIDVEEELMEDDSKFSSDGNPSKIAYKS--ALFLGIYPEKIASLPYYVAVTDANTLFFVSSLHIAYVGECELKEEMNDVIEFPSSDE-----WSTAG---------RRRFRAEGSEETKKFVKYIREV---SMNEIPFTESDSAILEQQSRVDLRKEQLKSLEIHSRSD--RLELIKAGRAFSILSEKYGNELLKQSEEEIPSNSSWNDFMSVVRILQEFGY--------------IDENHKV----TSLGKLGAAVRTENEIWLSTVLTSEEIQNLYPQQFAAALSAVISDSRMRNDVYLDFELSPELESVCVD-LQFLANRIIRSQEQNGIYFSAMVDRQEASLTEAWASGMLWNELLSRTSLQEGDICRKLRRVMDALRQIPHLPIVSESLRTNARRALTLMDRYPVSDDITYSGD 1111          
BLAST of jgi.p|Trimin1|353078 vs. uniprot
Match: A0A3D1PCR4_9CYAN (DEAD/DEAH box helicase n=1 Tax=Cyanobacteria bacterium UBA11049 TaxID=2055787 RepID=A0A3D1PCR4_9CYAN)

HSP 1 Score: 594 bits (1531), Expect = 1.750e-192
Identity = 398/1038 (38.34%), Postives = 536/1038 (51.64%), Query Frame = 1
Query:  346 HALFPFDLDGFQLEALDALGARKNVIVSAPTGSGKTVAGELAIYYALALGLRVFYTTPLKALSNQKFSDFRRRFGAERVGLLTGDSSYNREAQVCVMTTEVFRNMLYDSAAGIVGGEGAAATLGPDELKDVFAVVFDEFHYMNDRDRGTVWEESVISCPRHVLLVALSATMANVQDIAGWMDQTHGPTELVMSDFRPVPLRYWFANNRGIYPLFKDRESGPGARNGATATHAERVAMGKQGGRKGNWGAARQLPDRLKINPELEAMHQEEMHKRVAAERGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTRGVSVQREVPSYPYLVRCLARRDLLPAIVFVFSRAGCDKAAREVWGGGGSLLQAEESEVVRAKVEAFRAANPQVPFDEDRAELLTHGIAAHHAGMLPAYKSLVEELFIANLCKVVFATETLAAGVNMPARSTVISVLSKRGDTGIMPLLPSQLLQMAGRAGRRGLDVLGNVVVMRSRFEDVTDAHRLLLLPLDSIESKFRSSYSMAVNILKTRDLGSAKTLVEMSFGNYLQMKRLSPAQAAASEAEVRLETIRSKLEGLDLSEAKGYRKLWERLQSEQRIAGYLEEQEAEAEQEIVETILPLSRMGAGLLLTTGETGALVGDYPHPHGTPSGTTYEEHWCLVLKQDGSVVAAGPQHVRYIDLDDDKGLSRENALKASIMLAPAAKGVWYPPPLDELEGPVWGGAGGGKTGGALERPHMLVPSHAAVDTWDNDLLKALGGGIPTIPEPATPGHVLRQLAVVQRVREQLEAHPLHGLDNVTKEEVLNASKDISALEDQVRNGWRSEL-KFRQPAWDDFVSITRVLIRYGALLPEDLSQESDVEDVGSNEKLRLRSTAFGDLVGGINADNELWLALVLTSSAIKALSDVQLAGLVPAIISEYSRPDMFNLYGVSEEVSLCVEALVPLATELTTVQLENAVDLPVKLDASLGGLVESWALGCDWAELCASTSLDQGDICRLLRRTMEVLRQIALLPGVDRLVRDRARRAVNMMDRFPVSD 3456
            +++FPF+LD FQ  A+ AL A ++V+V APTGSGKT+ GE AIY ALA G RVFYTTPLKALSNQK  DFR RFGA+RVGLLTGD S NR+A + VMTTE+FRNMLY +  G VG            L DV AVV DE HYMNDR RGTVWEES+I CP  + LVALSAT+AN   +  W+D+ HGPT+L+ S+FRPVPL + F N +G++PL  D+ +G                                     KINP L+        KR + ++G                                          R    + E PS  Y +  L  RD+LPAI F+FSR GCDKA  E+  G  SL+   E+  ++ +++ F   NP+      + E L  GIAAHHAG+LPA+K LVEELF   L KVVFATETLAAG+NMPAR+TVIS LSKR D G   L PS+ LQMAGRAGRRG+D +G+VV +++ FE   +A  L     D + S+F  SY M +N+L+T  L  AK L+E SFG YL    L P   A +E E +LE +++++  +D  +   Y KL +RL+ E+++   LEEQ  EA  E +   +  +  G  L L              P  TP          LV K  GS      Q   +I L  D         +  I+       ++   P  ++ G +               P   +P         N+   A+   IP + +  T   VL Q   V  V  QL AHPLH L       +L     I+ L+ ++    R+EL ++    W +FV +  +L R+G L                     L  T  G +   +  DNELWL L L S  +  L+   LA  V A++SE  RPD +  + +S EV   +  L     +L  +Q    V LP+ L+  L  L+E WALG +W ELC +TSLD+GD+ RLLRRT+++L QI  +P +   ++  A RA+ ++DRFPV++
Sbjct:   13 NSIFPFELDEFQKSAIAALNADRSVVVCAPTGSGKTLVGEYAIYRALARGKRVFYTTPLKALSNQKLRDFRDRFGAQRVGLLTGDVSINRDAPILVMTTEIFRNMLYGTPIGEVGTS----------LVDVEAVVLDECHYMNDRQRGTVWEESIIYCPSEIQLVALSATIANSDRLTDWIDRVHGPTQLIYSEFRPVPLEFHFGNTKGLFPLL-DKNTG-------------------------------------KINPRLKP-------KRGSGDKG-----------------------------------------ARKQGPRPEAPSIEYTLSHLYTRDMLPAIYFIFSRRGCDKAVEEL--GNVSLVNKSEASQLKRQIDEFLRRNPEAG-RLGQIEPLYRGIAAHHAGILPAWKGLVEELFQQGLIKVVFATETLAAGINMPARTTVISTLSKRTDRGHRLLNPSEFLQMAGRAGRRGMDKIGHVVTLQTPFEGAKEAAYLATSKPDPLVSQFTPSYGMVLNLLQTHTLEQAKELIERSFGQYLATLYLQPQYEALAELENQLEHLQTQMNFVDAEQLDRYEKLRQRLKVERQLLKTLEEQAQEARYEQLSLTISFAMSGTVLSLRGKNV---------PTATPIPAV------LVAKIPGS-----GQFPYFICLGCDN--------RWYIVTVQDVADLYAELPRLDIPGNLM--------------PPAEMPLKPGQSRRGNEETAAIASAIPDLAQWHTAPEVLAQQERVAAVSAQLTAHPLHQLGPAN---ILKRRTRIAELQAEIDER-RAELERYSHHHWQEFVHLIEILQRFGCLD-------------------ELMPTPLGQVAAAVRGDNELWLGLALASGELDNLAPHHLAAAVAALVSETPRPDSWVRFALSSEVEEALARLRSTRRQLFQLQRRYDVTLPIWLEYDLVALLEQWALGVEWTELCDNTSLDEGDVVRLLRRTVDLLSQIPHIPHISASLQRNAYRAIQLLDRFPVNE 886          
BLAST of jgi.p|Trimin1|353078 vs. uniprot
Match: A0A2P8QHM9_9CYAN (DEAD/DEAH box helicase n=7 Tax=Chroococcidiopsidales TaxID=1890505 RepID=A0A2P8QHM9_9CYAN)

HSP 1 Score: 592 bits (1525), Expect = 1.310e-191
Identity = 398/1038 (38.34%), Postives = 542/1038 (52.22%), Query Frame = 1
Query:  349 ALFPFDLDGFQLEALDALGARKNVIVSAPTGSGKTVAGELAIYYALALGLRVFYTTPLKALSNQKFSDFRRRFGAERVGLLTGDSSYNREAQVCVMTTEVFRNMLYDSAAGIVGGEGAAATLGPDELKDVFAVVFDEFHYMNDRDRGTVWEESVISCPRHVLLVALSATMANVQDIAGWMDQTHGPTELVMSDFRPVPLRYWFANNRGIYPLFKDRESGPGARNGATATHAERVAMGKQGGRKGNWGAARQLPDRLKINPELEAMHQEEMHKRVAAER--GPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTRGVSVQREVPSYPYLVRCLARRDLLPAIVFVFSRAGCDKAAREVWGGGGSLLQAEESEVVRAKVEAFRAANPQVPFDEDRAELLTHGIAAHHAGMLPAYKSLVEELFIANLCKVVFATETLAAGVNMPARSTVISVLSKRGDTGIMPLLPSQLLQMAGRAGRRGLDVLGNVVVMRSRFEDVTDAHRLLLLPLDSIESKFRSSYSMAVNILKTRDLGSAKTLVEMSFGNYLQMKRLSPAQAAASEAEVRLETIRSKLEGLDLSEAKGYRKLWERLQSEQRIAGYLEEQEAEAEQEIVETILPLSRMGAGLLLTTGETGALVGDYPHPHGTPSGTTYEEHWCLVLKQDGSVVAAGPQHVRYIDLDDDKGLSRENALKASIMLAPAAKGVWYPPPLDELEGPVWGGAGGGKTGGALERPHMLVPSHAAVDTWDNDLLKALGGGIPTIPEPATPGHVLRQLAVVQRVREQLEAHPLHGLDNVTKEEVLNASKDISALEDQVRNGWRSELKFRQPAWDDFVSITRVLIRYGALLPEDLSQESDVEDVGSNEKLRLRSTAFGDLVGGINADNELWLALVLTSSAIKALSDVQLAGLVPAIISEYSRPDMFNLYGVSEEVSLCVEALVPLATELTTVQLENAVDLPVKLDASLGGLVESWALGCDWAELCASTSLDQGDICRLLRRTMEVLRQIALLPGVDRLVRDRARRAVNMMDRFPVSD 3456
            ++FPF+LD FQ +A+ AL A ++V+V APTGSGKT+ GE AIY AL+ G RVFYTTPLKALSNQK  DFR RFGA+ VGLLTGD S NR+A + VMTTE+FRNMLY +  G VG            L+ V AVV DE HYMNDR RGTVWEES+I CP  + LVALSAT+AN   +  W+ + HGPTEL+ S+FRPVPL ++F N +GI+PL  D +SG                                     KINP L         K+ +++R  GP                                              + E P     V  L  RD+LPAI F+FSR GCDKA  E+   G +L+  EE+  ++ +++ F   NP       + E L  GIAAHHAG+LPA+K LVEELF   L KVVFATETLAAG+NMPAR+TVIS LSKR D G   L PS+ LQMAGRAGRRG+D LG+VV +++ FE   +A  L     D + S+F  SY M +N+L+  +L  AK L+E SFG YL    L P   A +E E RL  ++++++ +D      Y KL +RL+ E+++   LEEQ  EA  E +   +  +  G  L L                G    T+      LV K  GS      Q   +I L  D       +   + + A  A+       LD  E  +               P + +P         N+    +   IP +P       VL Q   V  V+EQL AHPLH L N     +L     I+ L+ ++        ++    W++F+ +  +L R+GAL  +DL+                  T  G +   +  DNELWL L L SS +  L+   LA  + A+++E  RPD +  Y +SEEV + + ++ P+  +L  +Q    V +P+ L+  L  L+E W+LG +W ELCA+TSLD+GD+ RLLRRT+++L QI  +P +   +R  A RA+ +MDRFPV++
Sbjct:   14 SIFPFELDEFQRQAIAALNANRSVVVCAPTGSGKTLIGEYAIYRALSRGKRVFYTTPLKALSNQKLRDFRDRFGADLVGLLTGDVSINRDAPILVMTTEIFRNMLYGTPIGEVGTS----------LEGVEAVVLDECHYMNDRQRGTVWEESIIYCPPDIQLVALSATIANSDQLTDWICRVHGPTELIYSEFRPVPLEFYFGNPKGIFPLL-DPKSG-------------------------------------KINPRLRP-------KKGSSDRKQGP----------------------------------------------RPETPKLIDTVGHLYSRDMLPAIYFIFSRRGCDKAVEEL--AGVTLVNLEEAAQLKIQIDEFLRRNPDAG-RVGQVEPLYRGIAAHHAGILPAWKGLVEELFQQGLIKVVFATETLAAGINMPARTTVISTLSKRTDRGHRLLNPSEFLQMAGRAGRRGMDKLGHVVTLQTPFEGAKEAVYLATAKPDPLVSQFAPSYGMVLNLLQIHNLAEAKELIERSFGQYLATLYLKPQYDAIAEMEDRLADLQTQMQSVDEDRLNHYEKLRQRLKVERQLLKVLEEQALEARLEQLSLTINFAMSGTLLSL---------------RGKHVQTSTPIPAVLVAKIPGS-----GQAPYFICLGRDNRWYVAASSDIADLFAEFAR-------LDIPEHLM---------------PPVEMPLKPGQARKGNEETATIATQIPDLPPWHAAPEVLEQQHRVIAVQEQLTAHPLHHLGNPAS--ILKRKTRIAQLQTEIEERQAELERYAHRHWEEFLHLMEILQRFGAL--DDLTP-----------------TNLGKVAAAVRGDNELWLGLALASSELDNLAPHHLAAAIAALVTETPRPDSWVRYLLSEEVDIALASIRPIRRQLFQLQRRYNVTIPIWLEYDLVALIEQWSLGVEWTELCANTSLDEGDVVRLLRRTLDLLSQIPHVPFLSESLRRNAYRAIQLMDRFPVNE 884          
BLAST of jgi.p|Trimin1|353078 vs. uniprot
Match: A0A7C3ZQM0_9CYAN (DEAD/DEAH box helicase n=1 Tax=Planktothricoides sp. SpSt-374 TaxID=2282167 RepID=A0A7C3ZQM0_9CYAN)

HSP 1 Score: 592 bits (1525), Expect = 1.350e-191
Identity = 388/1036 (37.45%), Postives = 541/1036 (52.22%), Query Frame = 1
Query:  352 LFPFDLDGFQLEALDALGARKNVIVSAPTGSGKTVAGELAIYYALALGLRVFYTTPLKALSNQKFSDFRRRFGAERVGLLTGDSSYNREAQVCVMTTEVFRNMLYDSAAGIVGGEGAAATLGPDELKDVFAVVFDEFHYMNDRDRGTVWEESVISCPRHVLLVALSATMANVQDIAGWMDQTHGPTELVMSDFRPVPLRYWFANNRGIYPLFKDRESGPGARNGATATHAERVAMGKQGGRKGNWGAARQLPDRLKINPELEAMHQEEMHKRVAAERGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTRGVSVQREVPSYPYLVRCLARRDLLPAIVFVFSRAGCDKAAREVWGGGGSLLQAEESEVVRAKVEAFRAANPQVPFDEDRAELLTHGIAAHHAGMLPAYKSLVEELFIANLCKVVFATETLAAGVNMPARSTVISVLSKRGDTGIMPLLPSQLLQMAGRAGRRGLDVLGNVVVMRSRFEDVTDAHRLLLLPLDSIESKFRSSYSMAVNILKTRDLGSAKTLVEMSFGNYLQMKRLSPAQAAASEAEVRLETIRSKLEGLDLSEAKGYRKLWERLQSEQRIAGYLEEQEAEAEQEIVETILPLSRMGAGLLLTTGETGALVGDYPHPHGTPSGTTYEEHWCLVLKQDGSVVAAGPQHVRYIDLDDDKGLSRENALKASIMLAPAAKGVWYPPPLDELEGPVWGGAGGGKTGGALERPHMLVPSHAAVDTWDNDLLKALGGGIPTIPEPA-TPGHVLRQLAVVQRVREQLEAHPLHGLDNVTKEEVLNASKDISALEDQVRNGWRSELKFRQPAWDDFVSITRVLIRYGALLPEDLSQESDVEDVGSNEKLRLRSTAFGDLVGGINADNELWLALVLTSSAIKALSDVQLAGLVPAIISEYSRPDMFNLYGVSEEVSLCVEALVPLATELTTVQLENAVDLPVKLDASLGGLVESWALGCDWAELCASTSLDQGDICRLLRRTMEVLRQIALLPGVDRLVRDRARRAVNMMDRFPVSD 3456
            +FPF LD FQ +A+DAL A K+V+V APTGSGKT+ GE AI+ AL  G RVFYTTPLKALSNQKF DFR +FGAE+VGLLTGDSS NREA V VMTTE+FRNMLY +A G VG            L  V AVV DE HYMNDR RGTVWEES+I CP  + +VALSAT+AN Q +  W+ + HGPTEL+ S++RPVPL+Y F + +G++ L   +                                        KINP+L+A+                                                       +RG   + + PS  +++  L ++D+LPAI F+FSR GCDK+  ++     +L+   E+ ++ A+VE F AANP++        +L  GIA+HHAG+LP +K+ VEELF   L KVVFATETLAAG+NMPAR+TVIS LSKR D G   L  S+ LQMAGRAGRRG+D +G++V +++RFE   +A  L     D + S+F  +Y M +N+L+T +L   K LVE SFG YL   +++   AA  E+  R E +  +L  +D    + Y +   RL+   R     E    EA        +P+++ G  L        +L G   H     S         LV K  GS      Q    + L  D   +R   + +S ++A +   V             WG      T GA   P  L+P          +  K +   +P++P P  T   VL Q   V  +  QLEAHP+H   + +   +L   +    L++++        ++    W++F+ + +VL+  G L+P            G N+ L+   +  G+ V  I  DNELWL L L S  ++ L   Q A +  A+++E SRP+ +  Y +SEEV   +  L  +  +L  VQ  + V LPV L+  L  +VE WALG +W  LCA TSLD+GD+ R+LRRT++ L QI  +P +   VR  A RA+ ++DRFPV++
Sbjct:   11 VFPFALDDFQNQAIDALNAGKSVVVCAPTGSGKTLIGEYAIHRALYSGGRVFYTTPLKALSNQKFRDFRHQFGAEKVGLLTGDSSINREAAVLVMTTEIFRNMLYGTAIGAVGTS----------LDGVEAVVLDECHYMNDRQRGTVWEESIIYCPPEIQVVALSATVANSQQLTDWICRVHGPTELIYSEYRPVPLQYHFCSTKGLFALLDGKGQ--------------------------------------KINPKLKAL-------------------------------------------------------SRGRKGREDAPSLTFVMTQLWQKDMLPAIYFIFSRRGCDKSVEDLLSQDVNLVNDREARLIEARVEEFLAANPELARASQVRPVL-RGIASHHAGILPTWKAFVEELFQDGLIKVVFATETLAAGINMPARTTVISSLSKRTDDGHRLLTASEFLQMAGRAGRRGMDKVGHLVTLQTRFEGAKEAAFLATAGADPLVSQFTPTYGMVLNLLQTHNLEETKELVESSFGQYLATLQVADKIAAIEESSRRNEQLLHQLSNVDDGICRDYEQKSHRLKEANRFLKTAETNALEASAAAAVLAIPVAQPGDVL--------SLKGPNVHSRAPISAV-------LVQKLPGS-----GQFPYLVCLGQD---NRWYVVSSSDVVATSTSKV------------NWG------TAGAPPIPDELIPKPGQHRQGKPETAK-IAALLPSLPSPLETDSEVLAQQQRVAALEAQLEAHPIHQWGDPST--LLKRQRKAEELQEEISKNREKVARYLGRYWEEFLDLIQVLVEIGGLVP-----------TGENDTLQFSVSEMGESVAAIRGDNELWLGLALMSGWLERLDPHQFAAVCAALVTEVSRPNTWTRYELSEEVDRVLSGLQGIRRKLFQVQHRHDVALPVWLERDLIAIVEQWALGVEWFALCAETSLDEGDVVRILRRTLDFLSQIPHVPHISDDVRANAYRAMALIDRFPVNE 887          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353078 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z819_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G373_ECTSI2.960e-28247.01DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A4D9D0G8_9STRA2.560e-24542.83Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A7S2DG78_9STRA1.730e-23040.57Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A0G4EJS4_VITBC2.850e-20439.15Uncharacterized protein n=5 Tax=Vitrella brassicaf... [more]
A0A7S3E935_9RHOD1.890e-19737.39Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A7S0ZII0_9RHOD9.970e-19638.28Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A3D1PCR4_9CYAN1.750e-19238.34DEAD/DEAH box helicase n=1 Tax=Cyanobacteria bacte... [more]
A0A2P8QHM9_9CYAN1.310e-19138.34DEAD/DEAH box helicase n=7 Tax=Chroococcidiopsidal... [more]
A0A7C3ZQM0_9CYAN1.350e-19137.45DEAD/DEAH box helicase n=1 Tax=Planktothricoides s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_143contigContig_143:213163..222770 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|353078|estExt_Genemark1.C_Ctg_1430023
BRITEko00000,ko00001,ko00002,ko01000,ko03019
KEGG ModuleM00392
KEGG Pathwayko03018,map03018
KEGG koko:K12599
GOsGO:0000003,GO:0000373,GO:0000375,GO:0000377,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006810,GO:0007275,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0008380,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009892,GO:0009987,GO:0010154,GO:0010467,GO:0010468,GO:0010494,GO:0010496,GO:0010497,GO:0010501,GO:0010605,GO:0010608,GO:0010629,GO:0016070,GO:0016071,GO:0016441,GO:0016458,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019222,GO:0022414,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034641,GO:0035770,GO:0036464,GO:0040029,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048316,GO:0048519,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0051179,GO:0051234,GO:0060255,GO:0061458,GO:0065007,GO:0070013,GO:0070035,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:1901360,GO:1901363,GO:1990904
Descriptionnuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay
COG categoryL
Max annot lvl2759|Eukaryota
EggNOG OGsCOG4581@1|root,KOG0947@2759|Eukaryota
Evalue4.84e-283
Seed ortholog2880.D7G373
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-03_004770.1
TranscriptId353400
TrackFilteredModels1
ProteinId353078
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353078gene_14330Tribonema minus UTEX_B_3156 geneContig_143 213163..222770 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353078Trimin1|353078|estExt_Genemark1.C_Ctg_1430023Tribonema minus UTEX_B_3156 polypeptideContig_143 213163..222770 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_14330_12exon_14330_12Tribonema minus UTEX_B_3156 exonContig_143 213163..213667 -
exon_14330_11exon_14330_11Tribonema minus UTEX_B_3156 exonContig_143 214321..214631 -
exon_14330_10exon_14330_10Tribonema minus UTEX_B_3156 exonContig_143 215019..215201 -
exon_14330_9exon_14330_9Tribonema minus UTEX_B_3156 exonContig_143 216189..216611 -
exon_14330_8exon_14330_8Tribonema minus UTEX_B_3156 exonContig_143 216923..217193 -
exon_14330_7exon_14330_7Tribonema minus UTEX_B_3156 exonContig_143 217571..217842 -
exon_14330_6exon_14330_6Tribonema minus UTEX_B_3156 exonContig_143 218416..218535 -
exon_14330_5exon_14330_5Tribonema minus UTEX_B_3156 exonContig_143 219645..220227 -
exon_14330_4exon_14330_4Tribonema minus UTEX_B_3156 exonContig_143 220906..221381 -
exon_14330_3exon_14330_3Tribonema minus UTEX_B_3156 exonContig_143 221758..221931 -
exon_14330_2exon_14330_2Tribonema minus UTEX_B_3156 exonContig_143 222377..222648 -
exon_14330_1exon_14330_1Tribonema minus UTEX_B_3156 exonContig_143 222746..222770 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_14330CDS_14330Tribonema minus UTEX_B_3156 CDSContig_143 222746..222770 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_14330 ID=mRNA_14330|Name=jgi.p|Trimin1|353078|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3615bp|location=Sequence derived from alignment at Contig_143:213163..222770- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCAGCGACATACCAGAAGCACGCGGCGGCACGCGACGATGCGGAGCC
GGGAACCGGCAAGCAGGCAGTGGCAGATGTAAGCGGCATAGAGGTCAACA
ATAGGAAAAGCAGGCGGGCGCGTGCAAGGGCGCGGCGGCGGGACCGGGAG
GCAGACGATGTTCTCGCTGCTGAGGTGCAGCAGGAGGCCACTAGCACTAG
GAGATTGGAGCCAGAGCAGATGCCTGCAGAGCTGTATCAGAGGTGGATAC
ACTTATCAAACCTGGCTGGCTCTGCAGAGGCAGTGGATGTCTTACAGGAC
ATTGTGAGAAGCACATCTGGCGGCGAGGTGCGGTCGGAGCTATTTCATGC
GCTCTTCCCTTTTGACCTGGATGGGTTTCAGCTGGAGGCGTTGGATGCGC
TGGGTGCCCGCAAAAACGTCATTGTCAGTGCCCCCACCGGCAGCGGCAAG
ACTGTCGCCGGAGAATTAGCGATTTACTATGCGCTAGCCCTTGGGCTGCG
CGTGTTCTACACCACCCCCCTCAAGGCCCTCAGCAACCAGAAGTTCAGCG
ACTTCCGGCGCCGCTTTGGCGCCGAGCGCGTGGGCCTCCTGACGGGCGAC
TCCAGCTACAACCGCGAGGCGCAGGTGTGCGTGATGACCACGGAGGTCTT
CCGCAACATGCTCTACGACAGCGCCGCGGGGATAGTGGGGGGGGAGGGCG
CGGCGGCGACGCTGGGGCCCGACGAGCTGAAGGACGTGTTTGCCGTGGTG
TTTGATGAGTTTCACTACATGAACGACAGGGACCGCGGCACCGTGTGGGA
GGAGAGTGTGATCAGCTGCCCGCGGCACGTGCTGCTGGTGGCGCTGAGTG
CGACGATGGCCAACGTGCAGGACATTGCGGGGTGGATGGACCAGACGCAC
GGGCCCACGGAGCTCGTGATGAGTGACTTCCGGCCGGTGCCGCTCAGGTA
CTGGTTTGCCAACAACAGGGGCATCTACCCCCTCTTCAAGGACCGCGAGT
CCGGCCCGGGCGCGCGCAACGGCGCCACCGCCACGCACGCGGAGCGCGTG
GCCATGGGCAAGCAGGGCGGCCGCAAGGGCAACTGGGGCGCCGCGAGACA
GCTGCCCGATAGGCTCAAGATCAACCCTGAGCTAGAGGCCATGCATCAGG
AGGAGATGCACAAGAGGGTGGCCGCGGAGAGGGGCCCTCCCCCCAGGGGC
GGGCGGGGAGGGGAGCGGGGGGGGGGGGACTCCGCCTCCGCGGGGGGCAA
GAATCGGGCTTCGCGGGACTGGAAGGGGGGTGGTGGCGGGGGTGGGGGGG
GGGGGAGGACCAGGGGGGTGTCTGTGCAGCGGGAGGTGCCCAGCTACCCG
TACCTGGTGCGGTGTCTGGCGCGGCGCGATCTGCTGCCGGCGATCGTGTT
CGTGTTCAGCCGCGCGGGGTGCGACAAGGCGGCACGCGAGGTGTGGGGGG
GGGGCGGCTCGCTGCTGCAGGCGGAGGAGAGCGAGGTGGTGAGGGCCAAG
GTGGAGGCCTTCAGGGCAGCCAATCCGCAGGTACCATTTGATGAGGACCG
TGCTGAGCTGCTGACACACGGCATTGCTGCGCACCACGCTGGCATGCTGC
CCGCATACAAGTCCCTCGTGGAGGAGCTCTTCATTGCTAATCTCTGCAAG
GTGGTCTTCGCCACGGAGACCCTCGCCGCCGGCGTCAACATGCCCGCGCG
CAGCACCGTCATCTCAGTGCTCAGCAAGCGCGGCGACACGGGCATCATGC
CGCTGCTGCCGAGCCAGCTGCTGCAGATGGCGGGGCGCGCAGGGCGGCGC
GGCCTGGACGTCCTGGGCAACGTGGTGGTGATGCGCAGCCGCTTCGAGGA
CGTGACGGACGCGCACCGCCTGCTGCTCTTGCCGCTGGACTCGATAGAGT
CCAAGTTCCGCAGCAGCTACAGCATGGCGGTGAACATCCTCAAGACGCGC
GACCTGGGCAGCGCCAAGACCCTAGTTGAGATGAGCTTTGGCAACTACCT
GCAGATGAAGCGATTGAGCCCAGCACAGGCGGCGGCGTCAGAGGCGGAGG
TCCGGCTAGAGACCATTCGCTCCAAGCTTGAGGGTCTGGACCTGTCTGAG
GCCAAGGGCTACCGCAAGCTGTGGGAGAGGCTGCAGTCGGAGCAGAGGAT
TGCGGGGTACTTGGAGGAGCAGGAGGCGGAGGCAGAGCAGGAGATCGTGG
AGACAATCCTGCCCCTCAGCCGCATGGGTGCAGGCCTCCTGCTCACGACC
GGCGAAACGGGGGCGCTGGTGGGGGACTACCCCCACCCCCACGGAACCCC
CTCAGGCACCACCTACGAGGAGCACTGGTGCCTGGTGCTCAAGCAAGACG
GCAGCGTGGTGGCGGCGGGGCCGCAGCACGTGCGCTACATCGACCTAGAC
GACGACAAGGGTCTGAGCAGGGAGAATGCGCTGAAAGCCAGCATCATGCT
CGCGCCCGCAGCCAAGGGGGTGTGGTACCCGCCCCCCCTGGACGAGCTGG
AGGGGCCGGTGTGGGGGGGCGCGGGGGGAGGGAAGACGGGGGGGGCTCTG
GAGAGGCCGCATATGCTGGTGCCGTCGCACGCGGCGGTGGACACCTGGGA
CAACGACCTGCTCAAGGCGCTGGGGGGCGGCATACCTACCATCCCCGAGC
CAGCGACCCCCGGCCATGTGCTGCGGCAGCTGGCGGTGGTGCAGCGCGTA
AGGGAGCAGCTTGAGGCGCACCCTTTGCATGGCCTCGACAACGTGACCAA
GGAGGAAGTGCTCAACGCCAGCAAGGATATCTCTGCGCTTGAGGATCAGG
TGCGGAATGGGTGGCGCTCGGAGCTCAAGTTCCGCCAGCCCGCGTGGGAT
GACTTTGTCTCCATCACCAGAGTACTCATCAGATACGGAGCGCTGCTGCC
AGAAGACCTGTCGCAGGAGAGTGACGTTGAAGATGTGGGCTCCAACGAGA
AGTTGAGGTTGAGGTCCACGGCGTTTGGCGACCTCGTGGGCGGCATCAAC
GCGGACAACGAGCTGTGGCTCGCGCTGGTGCTAACGTCCAGCGCCATCAA
GGCGCTCTCGGACGTGCAGCTGGCGGGCCTGGTGCCCGCTATTATCAGCG
AGTACTCGAGACCGGACATGTTCAACCTCTACGGCGTCAGCGAAGAGGTC
TCCCTCTGCGTAGAGGCGCTAGTCCCCCTAGCCACAGAGCTCACGACGGT
GCAGCTCGAAAACGCCGTCGACCTCCCCGTCAAGCTCGACGCCTCTCTCG
GCGGTCTCGTGGAGTCGTGGGCGCTGGGCTGTGATTGGGCAGAGCTCTGC
GCCAGCACATCGCTCGACCAGGGCGACATCTGCCGCCTGCTGCGCCGCAC
CATGGAGGTGCTGCGCCAGATTGCGCTGCTGCCGGGGGTGGACCGGCTTG
TGCGCGACCGCGCGCGCCGCGCTGTGAACATGATGGACCGGTTCCCCGTC
AGCGACGAGGCCACGTTCGTCAGCGACAAGGAGGCGGAGAGCGCGGAGGA
AGGGGAGGCTGCTGCCGAAGGGGGGGAGGGGGAGCAGGAGGAGGGGGTGG
AGTTGGCATTGGAGGAGGGGGTAGAGGGGGAGGCAGAGGCGCCTGAAGTT
GAGGCTGGGGCATGA
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protein sequence of jgi.p|Trimin1|353078

>Trimin1|353078|estExt_Genemark1.C_Ctg_1430023 ID=Trimin1|353078|estExt_Genemark1.C_Ctg_1430023|Name=jgi.p|Trimin1|353078|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1205bp
MAATYQKHAAARDDAEPGTGKQAVADVSGIEVNNRKSRRARARARRRDRE
ADDVLAAEVQQEATSTRRLEPEQMPAELYQRWIHLSNLAGSAEAVDVLQD
IVRSTSGGEVRSELFHALFPFDLDGFQLEALDALGARKNVIVSAPTGSGK
TVAGELAIYYALALGLRVFYTTPLKALSNQKFSDFRRRFGAERVGLLTGD
SSYNREAQVCVMTTEVFRNMLYDSAAGIVGGEGAAATLGPDELKDVFAVV
FDEFHYMNDRDRGTVWEESVISCPRHVLLVALSATMANVQDIAGWMDQTH
GPTELVMSDFRPVPLRYWFANNRGIYPLFKDRESGPGARNGATATHAERV
AMGKQGGRKGNWGAARQLPDRLKINPELEAMHQEEMHKRVAAERGPPPRG
GRGGERGGGDSASAGGKNRASRDWKGGGGGGGGGGRTRGVSVQREVPSYP
YLVRCLARRDLLPAIVFVFSRAGCDKAAREVWGGGGSLLQAEESEVVRAK
VEAFRAANPQVPFDEDRAELLTHGIAAHHAGMLPAYKSLVEELFIANLCK
VVFATETLAAGVNMPARSTVISVLSKRGDTGIMPLLPSQLLQMAGRAGRR
GLDVLGNVVVMRSRFEDVTDAHRLLLLPLDSIESKFRSSYSMAVNILKTR
DLGSAKTLVEMSFGNYLQMKRLSPAQAAASEAEVRLETIRSKLEGLDLSE
AKGYRKLWERLQSEQRIAGYLEEQEAEAEQEIVETILPLSRMGAGLLLTT
GETGALVGDYPHPHGTPSGTTYEEHWCLVLKQDGSVVAAGPQHVRYIDLD
DDKGLSRENALKASIMLAPAAKGVWYPPPLDELEGPVWGGAGGGKTGGAL
ERPHMLVPSHAAVDTWDNDLLKALGGGIPTIPEPATPGHVLRQLAVVQRV
REQLEAHPLHGLDNVTKEEVLNASKDISALEDQVRNGWRSELKFRQPAWD
DFVSITRVLIRYGALLPEDLSQESDVEDVGSNEKLRLRSTAFGDLVGGIN
ADNELWLALVLTSSAIKALSDVQLAGLVPAIISEYSRPDMFNLYGVSEEV
SLCVEALVPLATELTTVQLENAVDLPVKLDASLGGLVESWALGCDWAELC
ASTSLDQGDICRLLRRTMEVLRQIALLPGVDRLVRDRARRAVNMMDRFPV
SDEATFVSDKEAESAEEGEAAAEGGEGEQEEGVELALEEGVEGEAEAPEV
EAGA*
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mRNA from alignment at Contig_143:213163..222770-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_14330 ID=mRNA_14330|Name=jgi.p|Trimin1|353078|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9608bp|location=Sequence derived from alignment at Contig_143:213163..222770- (Tribonema minus UTEX_B_3156 )
ATGGCAGCGACATACCAGAAGCACGGTACGTTTCAAACCACCGTATGTGC CCATCACTTCCCCCGCAGCTCACTGTTGACATTCATGTATCTGCGCCTTT TGCCTACCGCAGTTGCTTGCAGCGGCGGCACGCGACGATGCGGAGCCGGG AACCGGCAAGCAGGCAGTGGCAGATGTAAGCGGCATAGAGGTCAACAATA GGAAAAGCAGGCGGGCGCGTGCAAGGGCGCGGCGGCGGGACCGGGAGGCA GACGATGTTCTCGCTGCTGAGGTGCAGCAGGAGGCCACTAGCACTAGGAG ATTGGAGCCAGAGCAGATGCCTGCAGAGCTGTATCAGAGGTGGATACACT TATCAAACCTGGCTGGCTCTGCAGAGGCAGTGGATGTCTTACAGGTGAGC CCGGCGAACACAAGGTGCAACCATGAAGGAGACCTGTGCCTTCTGCACAC ATCTGTGTTGGCATGCAATGTCTTGCAGCATTGCCGGAGTGCTATGGCCT CAGTACATTGCGATATATATGGTTTTTGCCATTCCTGACGTCCAGCTGCA TGGCACAATGACAGCCAAGTCCTGTTGTGCAGGCTGGATTGCAAACGCCC TGAGTGCATCTCAGCCTAATGCGGCAACTGTGTCTTGGAGCAGTGACATG ATGCACTTGACAAGTGCATGGAGCATGCTTACTCAGGCCATGTAGCGCCG TCGTCTGCCACCATGATCCTTCTGTTGAGATGAATCTCTGTGCACAAACA GCACACTAGACATGATCATATGTCTTGTACTGTCGACAACGCTCGACATG GTAACGTAACCGGCGCCTTGCATATCATCTTGTGTGCAGGACATTGTGAG AAGCACATCTGGCGGCGAGGTGCGGTCGGAGCTATTTCATGCGCTCTTCC CTTTTGACCTGGATGGGTTTCAGCTGGAGGCGTTGGATGCGCTGGGTGCC CGCAAAAACGTCATTGTCAGTGCCCCCACCGGCAGCGGCAAGACTGTCGC CGGAGAATTAGCGGTGCGTGCTGGTCATGCTCTTTGCACGCGTCATTTGC GCAATCATGGAGTCGGATAATGCAGTGTGTGTGTTGCGTAGCGGCGTGCA GTCAGCCTGTGTGATGCGAGCCAGGCTGCGGCCGAGCATCTGCTGCGTGC GCCCTGCGCTGTTTGCTTGTGCACTGAGAACCTATGCTGTGCATATGCGC GCAAGACATTTTACAGCTGTACTATAAACAGCTCACACTGCGCACGACGT TCTGATGCAACCAAGACCCGGCATACTGGCTGGCACCAGCACCACAGCAC CCAATAATATTCATATCCTGCCAGTAGTTCGCTGTGACCCGTCTGATTGT GCATACCGCACTCACTCTCCCCCTCCCACCACGGTGCAGATTTACTATGC GCTAGCCCTTGGGCTGCGCGTGTTCTACACCACCCCCCTCAAGGCCCTCA GCAACCAGAAGTTCAGCGACTTCCGGCGCCGCTTTGGCGCCGAGCGCGTG GGCCTCCTGACGGGCGACTCCAGCTACAACCGCGAGGCGCAGGTGTGCGT GATGACCACGGAGGTCTTCCGCAACATGCTCTACGACAGCGCCGCGGGGA TAGTGGGGGGGGAGGGCGCGGCGGCGACGCTGGGGCCCGACGAGCTGAAG GACGTGTTTGCCGTGGTGTTTGATGAGTTTCACTACATGAACGACAGGGA CCGCGGCACCGTGTGGGAGGAGAGTGTGATCAGCTGCCCGCGGCACGTGC TGCTGGTGGCGCTGAGTGCGACGATGGCCAACGTGCAGGACATTGCGGGG TGGATGGACCAGACGCACGGGCCCACGGAGCTCGTGATGAGTGACTTCCG GCCGGTGCCGCTCAGGTATGTAGATATGCATGCGATTGGGTATGTATGGG GTAACACTAGGGGTAGGTATACGTGTATGTTAAGTGATACAAATTGTAGT TCTAGACTGTATGTGTATGCTGCTTCGAAGTACGTCAACTGATCGAATGG TTTGACATATTGTATGTGTGGATGCTGCTCCATGGTGTAGTTATAGGACA GTGCGTTTATCTTGAAGTGCGCAAAACACATGCTCCGCCACTTGCATTTA CAGTCAACACTGTGTGCAGCTACAGCAACTGAGATCTGCTGCACCTCGCA GGTGCAGCGGCATCTTGCGCTCTACTGATCTTGGCACCAAGACGGGTAGA GAGTAGAGTGCAAAGCAGGAGCTGCGGCGGTGTATGTATGGTGTTGTGAG TTGCGAGTTGTCCAGCTGTCAGCTGCGCAGTGCTCAGGTCTTGGACATTA GACGACATGAGCAACTATATAGCACCTCGTTGCTGACTTCTTCACAGGCA TCGCAGACAGCTGCACAGTCATCTTGCGTTCACCACCACTGGCCACTTGC ACATCTCAGCCGACTGAGCCTGAAAGCCGCCTGCCTGTGCCAACAGGTCA GCCACGCACTTCAACACTCCTCACGCCCCTGCCACTTCAACTGACGCCCA TTGCCCCCCCCCCCCCCCCCCCCCCCTCGCCACCACCTTTCAGGTACTGG TTTGCCAACAACAGGGGCATCTACCCCCTCTTCAAGGACCGCGAGTCCGG CCCGGGCGCGCGCAACGGCGCCACCGCCACGCACGCGGAGCGCGTGGCCA TGGGCAAGCAGGGCGGCCGCAAGGGCAACTGGGGCGCCGCGAGACAGCTG CCCGATAGGCTCAAGATCAACCCTGAGCTAGAGGCCATGCATCAGGAGGA GATGCACAAGAGGGTGGCCGCGGAGAGGGGCCCTCCCCCCAGGGGCGGGC GGGGAGGGGAGCGGGGGGGGGGGGACTCCGCCTCCGCGGGGGGCAAGAAT CGGGCTTCGCGGGACTGGAAGGGGGGTGGTGGCGGGGGTGGGGGGGGGGG GAGGACCAGGGGGGTGTCTGTGCAGCGGGAGGTGCCCAGCTACCCGTACC TGGTGCGGTGTCTGGCGCGGCGCGATCTGCTGCCGGCGATCGTGTTCGTG TTCAGCCGCGCGGGGTGCGACAAGGCGGCACGCGAGGTGTGGGGGGGGGG CGGCTCGCTGCTGCAGGCGGAGGAGAGCGAGGTGGTGAGGGCCAAGGTGG AGGCCTTCAGGGCAGCCAATCCGCAGGTGTGTTTTTGGGGATTGCTGCAA TGGGGCACCTTGCCGGTGCTTGTACAGAGCGTTTTGACATGTCGCATTGG TGTGTTGGAGCGTTCGGTCGATGCAGGTTATATTGCACTTTCGCGGCATG TTCAGGGGGCAGGGGGTCGTTTGTGTGTGCAATCGCCCGAACCAACTGGC TGAAGGTATCATATTGTATTGTCACAACGCATCAGGGCGTGTGACGATGG TGGGAGAAGGGGGTTGGAGCACTCATGGTGTGAGATGGCTCTCAGAGTGC CGTCCGTTGTTTGCGGTATCGTGTACTCACTGAAGCACCCCTGTACGTTA GCAGCCACGTGTAATGTGGCAGCACTGCAGATTTCCTCAGCTCAAGTTGA AGCGTGACATCCTCACCGGACACGTGTCGCGGTTGACCCTTGTCTGTTTC GCTGTGCTTACCACCTGATTAGGGTGTTTGCAAGCACTGAGCAGTGGTAC TTGCATTGCCTGGCTTGCAGGCGCAGAAGAAAGCATTGTACTTAAGTAAC AGACGGCTGGTTCAAACTTTAACGTCAACTTCAACACAAAATCTGGCTGT TGCATTGTGTACGTGTCAGCCACAATTTCCACCCGTAACGAAGCTGTGTG TGATGTTGCTGCAGCCAATATCTTTTGGCGAGTCGCCATGCTTGCTGTGT GTATGTTGGCACGTGCTTGCCTACCTGTGTCATCATCAGTGCAGCTGGGT TTGGTGACATGAACGCATGTTGAGGGCGTCATTGGAAGCAGCGGCAGGTT CGGGCACACAATAGCCACTGTCATTAGCTATCACCACTGCGCTGTCATGA AGGGTAGTGATCCACGTGTGAGTTTGGCCCCAGGTTCGTGTACATGCATC ATGATTCGTAACAGTTCTCATGGGTTAGCATCAGCTCAGCTCTCTACAGT TCATGGGTGTGGATGTTTCTGAGATGCAGGTGTGAGAACCAATTAGCCAT GTTACAGCTCTACAACAGAACAACACGAAGCACGCGTACTGCTATCTTGA CAGATAGGCCGTGGCATCATCACTGGCATCACCAGCTCATCATTTTCCAT CCATTCTCATTGTGCGCATGTTGATTGCGTTCCAGGTACCATTTGATGAG GACCGTGCTGAGCTGCTGACACACGGCATTGCTGCGCACCACGCTGGCAT GCTGCCCGCATACAAGTCCCTCGTGGAGGAGCTCTTCATTGCTAATCTCT GCAAGGTGAGCGCTGTGCACATGCATGTAAGGTATGTAGGTATGTACTTC GAAGTAAGCATGTATATACTTGAACGTATGCACCTTCAAGCCTTTCAAAT GCACTGTGCGTGCGAGTTCTGATGCAGTGCATGTTGTCGTGCGTCGCGTA AAGTGCAGTTTGCGTTGACTTTGCGGAATCACCTCCCAGTGCACTCTCAA GATTAGCCTCTGAGCAACACTGTGTGCGTTGACCAGACACTGCAAAATGG CAGTTTACATCTTACACACTGTGAGCGGCTGTTCAGGATTGTCAAAAGCA TGCAGTCTGATACAGGGATGCGCCATCCACATGAGCTGATATTCACCTTC AAGTTTCCTCTGTGTTTGGGCTTCGTGTTGACCAACGTTATATCATACAC GCCATGGCACACCCACATCACCCCAGTGCTCAGCCGGTGTGGCAGCGCGT AGCGCATGCTGCCAAGGCTGTCATGTCAGCACGCATGCAGCGCCACAAAG CCTCGAACAGTGCAACGGCGGCGATCACCTCACAGGACACGCACACACCC CTGTGCACCCCCCCCCTCCCCGCATCAGGTGGTCTTCGCCACGGAGACCC TCGCCGCCGGCGTCAACATGCCCGCGCGCAGCACCGTCATCTCAGTGCTC AGCAAGCGCGGCGACACGGGCATCATGCCGCTGCTGCCGAGCCAGCTGCT GCAGATGGCGGGGCGCGCAGGGCGGCGCGGCCTGGACGTCCTGGGCAACG TGGTGGTGATGCGCAGCCGCTTCGAGGACGTGACGGACGCGCACCGCCTG CTGCTCTTGCCGCTGGACTCGATAGAGTCCAAGTTCCGCAGCAGCTACAG GTGGGGGCGGGTGTGACGCGCCGGTATGCAGTTGAAGTAGCTTCGAGCGT TGTGTGTGCTGCGCGTGAATGATCGGTCTTCAGCAGGCCAGCCCCTTGAT ATGGCTTCGTGCTGTCGCTTTGCAAAGAGTTCAAAAGCCCGCATCTTGAG TCGCTCAAGCGCAACTGCAAGCATGCTCAGGCAGCAGCGTCTTTGGCATC TCTGGCGCAGGCAGTCGTTGAACGAACAAGGCGTACTCACTTGCACGCCT TCATCACGATTTGCGATCACGACTCGCGATCACGACTCGTGATCATGACT CGCAATCATGACCGACGCGTCACCGCTCACCTCCGACCCCATCCCCGCGC ACTTCAACACACGCGCGCGCGCCGCAGCATGGCGGTGAACATCCTCAAGA CGCGCGACCTGGGCAGCGCCAAGACCCTAGTTGAGATGAGCTTTGGCAAC TACCTGCAGATGAAGCGATTGAGCCCAGCACAGGCGGCGGCGTCAGAGGC GGAGGTCCGGCTAGAGACCATTCGCTCCAAGCTTGAGGGTCTGGACCTGT CTGAGGCCAAGGGCTACCGCAAGCTGTGGGAGAGGCTGCAGTCGGAGCAG AGGATTGCGGGGTACTTGGAGGAGCAGGAGGCGGAGGCAGAGCAGGAGGT GTGCTTACGACATGTGTTGAGCGTTGCAACACGACTCTGTTGGGACAGTG CCCATTTAGGTTCTTGTGTCCGAGACATGGTCGGAGTTGATTCAGAGTGC AAGCGAGTGACTCGCCACAACTTCACAGCTCAGAGCCAATATTGGGCTTC CTGCGCCATGCCTCAGTTATTCCATGCAGTAGCGTGCGCACTGCGCACTC AATTAACACCCCCTCCTTTTTCATGCAACAAGGGACACCTTGCCTTAAAG TCACACACACACACCCCTCAACTCTCAACGTCCGGCACTGTTTCGCATCC CTCCCACAGATCGTGGAGACAATCCTGCCCCTCAGCCGCATGGGTGCAGG CCTCCTGCTCACGACCGGCGAAACGGGGGCGCTGGTGGGGGACTACCCCC ACCCCCACGGAACCCCCTCAGGCACCACCTACGAGGAGCACTGGTGCCTG GTGCTCAAGCAAGACGGCAGCGTGGTGGCGGCGGGGCCGCAGCACGTGCG CTACATCGACCTAGACGACGACAAGGGTCTGAGCAGGGAGAATGCGCTGA AAGCCAGCATCATGCTCGCGCCCGCAGCCAAGGGGGTGTGGTACCCGCCC CCCCTGGACGAGCTGGAGGGGCCGGTGTGGGGGGGCGCGGGGGGAGGGAA GACGGGGGGGGCTCTGGAGAGGCCGCATATGCTGGTGCCGTCGCACGCGG CGGTGGACACCTGGGACAACGACCTGCTCAAGGTGAGGTGGATGCGTGGC TTGCAGTGTTGTACGGCTTTCTTTTGTCAGGTACTGCGAAGTAGTAGTGA AGTACATGGTTGAAACCACGCTGCATATCTTGTGCAACTGGTGCGGCGGT TGACCCCTGGGACAACGACCTGCTCAAGGTGAACTGGATGAAGTTGTAAT TTGTCATTATGACATGCAGCTTCATAGTTCAAGTTGAAGTGAGATGCAGA AGAGCTGCGCTGGTGCCGTTGCACGCAGCGGTGGACACCTGGGACAATGA GCTGCTTAAGGTGGGGTAGATGCGTGGCCTGCAGTGTTTTGTACAGCTTC TTCGACCAGATACACAAGTAGCCAAGTACTTCGAACAAGCAATTGACTCC ATGCTACTATCTTGTGCATTGCCCTTAATCTTGCTGCTGTTGCTGCACGG AAGCAATTGTGCCTGCTCTTGCTCAAGGAAGCGGAAGCGCTTCATGGTCG CTCTGCTACGCTGTGTCCATTGATCTGTGCGGCATGGCAGGCAGGTACTG TAACTTGTGGAGTGTGCTAACTCCGCTTCAGTATGCTAGACTGGGCACTT GGGTTTCAGCGTGTATGACGTTATTGATCTATGCTTTGTCTTCGACAACT TCAAGTGTTGTCTGATGGTGCTCTGCGCTGCAGGCAACTTCAAGTCTCTT GTGATGTCGATGACCTTCTCTGCAGGTGCTGCGTGGCAGGATAGCTATAC CGTTTGTATCCTGTACTTGGGGGAAGCATCACCTCTGGCAACTTCAAGTC TTTTGTGATGATGACCTCCTCTGCAGGCGCTGGGGGGCAGTATGTATACC TGCAATATGTTACTGGTATCTTGTACCTGGGATGTATCACCTTTGACAAC TTCAACTTCAACTACCCCATGACGTCCATGATCTTCTTCGCAGGCGCTAC AGCATGATAATTATATCCTGTACCTGGGGAAGTATCACATCTGACCACTT CAAGTCTCTTTTGATGCAGGCGCTGGGGGGCGGCATACCTACCATCCCCG AGCCAGCGACCCCCGGCCATGTGCTGCGGCAGCTGGCGGTGGTGCAGCGC GTAAGGGAGCAGCTTGAGGCGCACCCTTTGCATGGCCTCGACAACGTGAC CAAGGAGGAAGTGCTCAACGCCAGCAAGGATATCTCTGCGCTTGAGGATC AGGTTGGTGCACCATATTGCATGGGGGCAGGGCCGGCGACATGGCAGCGC ACAACTTAAAGGAGTAGGGGGGGAGTGTTGTGTATCTGTTGGCATGTCAC TTTGCAGTTCTTCAGTTGTTCTGGGGTGTTGCGCTTTTTAAACTCTTGTT GTGCACGTCAAGCTGACAATTTCTGGTTGGCTAGTTCGCACATGATCAGG TCTCCTGCTGCCACGGCACTTTCAATGAATGAATGCGGTGGTAACCCGCT TAAAGGTGGTGTGATGGTGAATCGCATCCGCACACAACGCTCGCCACGAG CACGGTGCTGTCGACATGTGTATTATAGGTCTAGTCCACGGGCAGGATGG CTGAGACTGCCCCCCGCTGCGTTCCTCACGTGCGCGCAGGTGCGGAATGG GTGGCGCTCGGAGCTCAAGTTCCGCCAGCCCGCGTGGGATGACTTTGTCT CCATCACCAGAGTACTCATCAGATACGGAGCGCTGCTGCCAGAAGACCTG TCGCAGGAGAGTGACGTTGAAGATGTGGGCTCCAACGAGAAGTTGAGGTT GAGGTCCACGGCGTTTGGCGACCTCGTGGGCGGCATCAACGCGGACAACG AGCTGTGGCTCGCGCTGGTGCTAACGTCCAGCGCCATCAAGGCGCTCTCG GACGTGCAGCTGGCGGGCCTGGTGCCCGCTATTATCAGCGAGTACTCGAG GTGAGCGCTGCTGCCATCGCTGAGCGCTGCCGTAGCATAGAGCTGCATGG AGGTGCGGCGCGCGCGCATCGCCCTCGCAGTTCCTCTGCGTACAACCCAG GCCATGATTGTGGGAGGAGCAGAGGAAATGCTGTTGGCACATGACTGTCG TGCTTGGCAACAATCAGCACAGTGCCGCGTGTCGTGCTTGCCCAGGACCT TTCTGGCACCAGTGATCATGACGATGACGCTCCACGCTCCTTGTGGGTGT GAGTCTTGCGACCCCGAGGCCCTGGCATACTTTAACAGTGTCATAGTCTG GTATGCACCCCTGTCTCACTCACTGCTGCCACAGGCTGCATGCATGAGGC CATGTGTATCCAGAGATAGTACCCTTGAAGCCTGTGCGCATGCTGCGCAA CTGGTACACCTTGACGTGCTTGACTCATGGTAACGTGCCACTTCGCGTTC CCAGTGCCTTTGAACGCTGTCTGTAGGCCTGGCATGTCAAGCTTGCACAG TGTCTGCTTCCTTAAAATGGCCGTCGTGCTACGCACACACCGCCTACTCC TGCGCGTGTGCTCAACGGACACAGTGTACGCAAGCAGACAGCGACACCCC ATAACCACGCCTCCTCGTTGCCATCCTGCTGTGTATAATACATCGCATCG CAGACCGGACATGTTCAACCTCTACGGCGTCAGCGAAGAGGTCTCCCTCT GCGTAGAGGCGCTAGTCCCCCTAGCCACAGAGCTCACGACGGTGCAGCTC GAAAACGCCGTCGACCTCCCCGTCAAGCTCGACGCCTCTCTCGGCGGTCT CGTGGAGTCGTGGGCGCTGGGCTGTGATTGGGCAGAGCTCTGCGCCAGCA CATCGCTCGACCAGGGCGACATCTGCCGCCTGCTGCGCCGCACCATGGAG GTGCTGCGCCAGATTGCGCTGCTGCCGGGGGTGGACCGGCTTGTGCGCGA CCGCGCGCGCCGCGCTGTGAACATGATGGACCGGTTCCCCGTCAGCGACG AGGCCACGTTCGTCAGCGACAAGGAGGCGGAGAGCGCGGAGGAAGGGGAG GCTGCTGCCGAAGGGGGGGAGGGGGAGCAGGAGGAGGGGGTGGAGTTGGC ATTGGAGGAGGGGGTAGAGGGGGAGGCAGAGGCGCCTGAAGTTGAGGCTG GGGCATGA
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Coding sequence (CDS) from alignment at Contig_143:213163..222770-

>mRNA_14330 ID=mRNA_14330|Name=jgi.p|Trimin1|353078|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=3615bp|location=Sequence derived from alignment at Contig_143:213163..222770- (Tribonema minus UTEX_B_3156 )
ATGGCAGCGACATACCAGAAGCACGCGGCGGCACGCGACGATGCGGAGCC
GGGAACCGGCAAGCAGGCAGTGGCAGATGTAAGCGGCATAGAGGTCAACA
ATAGGAAAAGCAGGCGGGCGCGTGCAAGGGCGCGGCGGCGGGACCGGGAG
GCAGACGATGTTCTCGCTGCTGAGGTGCAGCAGGAGGCCACTAGCACTAG
GAGATTGGAGCCAGAGCAGATGCCTGCAGAGCTGTATCAGAGGTGGATAC
ACTTATCAAACCTGGCTGGCTCTGCAGAGGCAGTGGATGTCTTACAGGAC
ATTGTGAGAAGCACATCTGGCGGCGAGGTGCGGTCGGAGCTATTTCATGC
GCTCTTCCCTTTTGACCTGGATGGGTTTCAGCTGGAGGCGTTGGATGCGC
TGGGTGCCCGCAAAAACGTCATTGTCAGTGCCCCCACCGGCAGCGGCAAG
ACTGTCGCCGGAGAATTAGCGATTTACTATGCGCTAGCCCTTGGGCTGCG
CGTGTTCTACACCACCCCCCTCAAGGCCCTCAGCAACCAGAAGTTCAGCG
ACTTCCGGCGCCGCTTTGGCGCCGAGCGCGTGGGCCTCCTGACGGGCGAC
TCCAGCTACAACCGCGAGGCGCAGGTGTGCGTGATGACCACGGAGGTCTT
CCGCAACATGCTCTACGACAGCGCCGCGGGGATAGTGGGGGGGGAGGGCG
CGGCGGCGACGCTGGGGCCCGACGAGCTGAAGGACGTGTTTGCCGTGGTG
TTTGATGAGTTTCACTACATGAACGACAGGGACCGCGGCACCGTGTGGGA
GGAGAGTGTGATCAGCTGCCCGCGGCACGTGCTGCTGGTGGCGCTGAGTG
CGACGATGGCCAACGTGCAGGACATTGCGGGGTGGATGGACCAGACGCAC
GGGCCCACGGAGCTCGTGATGAGTGACTTCCGGCCGGTGCCGCTCAGGTA
CTGGTTTGCCAACAACAGGGGCATCTACCCCCTCTTCAAGGACCGCGAGT
CCGGCCCGGGCGCGCGCAACGGCGCCACCGCCACGCACGCGGAGCGCGTG
GCCATGGGCAAGCAGGGCGGCCGCAAGGGCAACTGGGGCGCCGCGAGACA
GCTGCCCGATAGGCTCAAGATCAACCCTGAGCTAGAGGCCATGCATCAGG
AGGAGATGCACAAGAGGGTGGCCGCGGAGAGGGGCCCTCCCCCCAGGGGC
GGGCGGGGAGGGGAGCGGGGGGGGGGGGACTCCGCCTCCGCGGGGGGCAA
GAATCGGGCTTCGCGGGACTGGAAGGGGGGTGGTGGCGGGGGTGGGGGGG
GGGGGAGGACCAGGGGGGTGTCTGTGCAGCGGGAGGTGCCCAGCTACCCG
TACCTGGTGCGGTGTCTGGCGCGGCGCGATCTGCTGCCGGCGATCGTGTT
CGTGTTCAGCCGCGCGGGGTGCGACAAGGCGGCACGCGAGGTGTGGGGGG
GGGGCGGCTCGCTGCTGCAGGCGGAGGAGAGCGAGGTGGTGAGGGCCAAG
GTGGAGGCCTTCAGGGCAGCCAATCCGCAGGTACCATTTGATGAGGACCG
TGCTGAGCTGCTGACACACGGCATTGCTGCGCACCACGCTGGCATGCTGC
CCGCATACAAGTCCCTCGTGGAGGAGCTCTTCATTGCTAATCTCTGCAAG
GTGGTCTTCGCCACGGAGACCCTCGCCGCCGGCGTCAACATGCCCGCGCG
CAGCACCGTCATCTCAGTGCTCAGCAAGCGCGGCGACACGGGCATCATGC
CGCTGCTGCCGAGCCAGCTGCTGCAGATGGCGGGGCGCGCAGGGCGGCGC
GGCCTGGACGTCCTGGGCAACGTGGTGGTGATGCGCAGCCGCTTCGAGGA
CGTGACGGACGCGCACCGCCTGCTGCTCTTGCCGCTGGACTCGATAGAGT
CCAAGTTCCGCAGCAGCTACAGCATGGCGGTGAACATCCTCAAGACGCGC
GACCTGGGCAGCGCCAAGACCCTAGTTGAGATGAGCTTTGGCAACTACCT
GCAGATGAAGCGATTGAGCCCAGCACAGGCGGCGGCGTCAGAGGCGGAGG
TCCGGCTAGAGACCATTCGCTCCAAGCTTGAGGGTCTGGACCTGTCTGAG
GCCAAGGGCTACCGCAAGCTGTGGGAGAGGCTGCAGTCGGAGCAGAGGAT
TGCGGGGTACTTGGAGGAGCAGGAGGCGGAGGCAGAGCAGGAGATCGTGG
AGACAATCCTGCCCCTCAGCCGCATGGGTGCAGGCCTCCTGCTCACGACC
GGCGAAACGGGGGCGCTGGTGGGGGACTACCCCCACCCCCACGGAACCCC
CTCAGGCACCACCTACGAGGAGCACTGGTGCCTGGTGCTCAAGCAAGACG
GCAGCGTGGTGGCGGCGGGGCCGCAGCACGTGCGCTACATCGACCTAGAC
GACGACAAGGGTCTGAGCAGGGAGAATGCGCTGAAAGCCAGCATCATGCT
CGCGCCCGCAGCCAAGGGGGTGTGGTACCCGCCCCCCCTGGACGAGCTGG
AGGGGCCGGTGTGGGGGGGCGCGGGGGGAGGGAAGACGGGGGGGGCTCTG
GAGAGGCCGCATATGCTGGTGCCGTCGCACGCGGCGGTGGACACCTGGGA
CAACGACCTGCTCAAGGCGCTGGGGGGCGGCATACCTACCATCCCCGAGC
CAGCGACCCCCGGCCATGTGCTGCGGCAGCTGGCGGTGGTGCAGCGCGTA
AGGGAGCAGCTTGAGGCGCACCCTTTGCATGGCCTCGACAACGTGACCAA
GGAGGAAGTGCTCAACGCCAGCAAGGATATCTCTGCGCTTGAGGATCAGG
TGCGGAATGGGTGGCGCTCGGAGCTCAAGTTCCGCCAGCCCGCGTGGGAT
GACTTTGTCTCCATCACCAGAGTACTCATCAGATACGGAGCGCTGCTGCC
AGAAGACCTGTCGCAGGAGAGTGACGTTGAAGATGTGGGCTCCAACGAGA
AGTTGAGGTTGAGGTCCACGGCGTTTGGCGACCTCGTGGGCGGCATCAAC
GCGGACAACGAGCTGTGGCTCGCGCTGGTGCTAACGTCCAGCGCCATCAA
GGCGCTCTCGGACGTGCAGCTGGCGGGCCTGGTGCCCGCTATTATCAGCG
AGTACTCGAGACCGGACATGTTCAACCTCTACGGCGTCAGCGAAGAGGTC
TCCCTCTGCGTAGAGGCGCTAGTCCCCCTAGCCACAGAGCTCACGACGGT
GCAGCTCGAAAACGCCGTCGACCTCCCCGTCAAGCTCGACGCCTCTCTCG
GCGGTCTCGTGGAGTCGTGGGCGCTGGGCTGTGATTGGGCAGAGCTCTGC
GCCAGCACATCGCTCGACCAGGGCGACATCTGCCGCCTGCTGCGCCGCAC
CATGGAGGTGCTGCGCCAGATTGCGCTGCTGCCGGGGGTGGACCGGCTTG
TGCGCGACCGCGCGCGCCGCGCTGTGAACATGATGGACCGGTTCCCCGTC
AGCGACGAGGCCACGTTCGTCAGCGACAAGGAGGCGGAGAGCGCGGAGGA
AGGGGAGGCTGCTGCCGAAGGGGGGGAGGGGGAGCAGGAGGAGGGGGTGG
AGTTGGCATTGGAGGAGGGGGTAGAGGGGGAGGCAGAGGCGCCTGAAGTT
GAGGCTGGGGCATGA
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