mRNA_1433 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|161921 vs. uniprot
Match: A0A835Z623_9STRA (Peptidase C14 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z623_9STRA) HSP 1 Score: 499 bits (1284), Expect = 1.780e-178 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1 Query: 1 MGKSKALCIGINYGKTANALQGCVNDAKNLQKLLVDSGAVAAEDITVLCEPTGEDICNAISKLAELSKSQDLDYIFISYSGHGTQIKDTTGDETDGKDEAICPADFGTRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTLSGEATLPGKIAYISGCRDTQTSADAFDQDSRQFTGAMTSALIKAHKVDEETHHDVFALVADMKKLLRAGGYSQIPVLSSSFDIPRQFAFIPHL 747 MGKSKALCIGINYGKTANALQGCVNDAKNLQKLLVDSGAVAAEDITVLCEPTGEDICNAISKLAELSKSQDLDYIFISYSGHGTQIKDTTGDETDGKDEAICPADFGTRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTLSGEATLPGKIAYISGCRDTQTSADAFDQDSRQFTGAMTSALIKAHKVDEETHHDVFALVADMKKLLRAGGYSQIPVLSSSFDIPRQFAFIPHL Sbjct: 1 MGKSKALCIGINYGKTANALQGCVNDAKNLQKLLVDSGAVAAEDITVLCEPTGEDICNAISKLAELSKSQDLDYIFISYSGHGTQIKDTTGDETDGKDEAICPADFGTRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTLSGEATLPGKIAYISGCRDTQTSADAFDQDSRQFTGAMTSALIKAHKVDEETHHDVFALVADMKKLLRAGGYSQIPVLSSSFDIPRQFAFIPHL 249
BLAST of jgi.p|Trimin1|161921 vs. uniprot
Match: A0A835YZ34_9STRA (Caspase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ34_9STRA) HSP 1 Score: 483 bits (1244), Expect = 2.850e-171 Identity = 241/248 (97.18%), Postives = 244/248 (98.39%), Query Frame = 1 Query: 1 MGKSKALCIGINYGKTANALQGCVNDAKNLQKLLVDSGAVAAEDITVLCEPTGEDICNAISKLAELSKSQDLDYIFISYSGHGTQIKDTTGDETDGKDEAICPADFGTRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTLSGEATLPGKIAYISGCRDTQTSADAFDQDSRQFTGAMTSALIKAHKVDEETHHDVFALVADMKKLLRAGGYSQIPVLSSSFDIPRQFAFIPH 744 MGKSKALCIGINYGKTANALQGCVNDAKNLQKLLVDSGAVAAEDITVLCEPTGE+ICNAISKLAELSKSQDLDY FISYSGHGTQIKDTTGDETDGKDEAICPADFG RGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTLSG+ATLPGKIAYISGCRDTQTSADAFDQDSRQFTGAMTSALIKA K+DEETHHDVFALVA MKKLLRAGGYSQIPVLSSSFDIPRQFAFIPH Sbjct: 1 MGKSKALCIGINYGKTANALQGCVNDAKNLQKLLVDSGAVAAEDITVLCEPTGEEICNAISKLAELSKSQDLDYTFISYSGHGTQIKDTTGDETDGKDEAICPADFGMRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTLSGDATLPGKIAYISGCRDTQTSADAFDQDSRQFTGAMTSALIKAQKLDEETHHDVFALVAGMKKLLRAGGYSQIPVLSSSFDIPRQFAFIPH 248
BLAST of jgi.p|Trimin1|161921 vs. uniprot
Match: A0A835ZCN1_9STRA (Peptidase C14, caspase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCN1_9STRA) HSP 1 Score: 389 bits (998), Expect = 6.830e-135 Identity = 188/248 (75.81%), Postives = 218/248 (87.90%), Query Frame = 1 Query: 1 MGKSKALCIGINYGKTANALQGCVNDAKNLQKLLVDSGAVAAEDITVLCEPTGEDICNAISKLAELSKSQDLDYIFISYSGHGTQIKDTTGDETDGKDEAICPADFGTRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTLSGEATLPGKIAYISGCRDTQTSADAFDQDSRQFTGAMTSALIKAHKVDEETHHDVFALVADMKKLLRAGGYSQIPVLSSSFDIPRQFAFIPH 744 M +S+ALCIGINYGKTANALQGCVNDA NL KLL SGAVA EDITVLCEPTGE++CNAIS LA+LS SQ+L+Y+FISYSGHGTQ+KD TGDE DG+DEAICP+DF +GVITDDLLKSLLQ+FN TTVCFLADACHSGS+LD+NR YTS++CTLSG+A LPGKIAYISGCRD QTSADA+DQDSR + G MT A IK+ K++ T DVF LVA+M+KLLRA GY+QIPVL++SFDIPR F+FIP+ Sbjct: 1 MSRSRALCIGINYGKTANALQGCVNDANNLSKLLDGSGAVAMEDITVLCEPTGEELCNAISHLADLSVSQNLNYVFISYSGHGTQVKDVTGDEADGRDEAICPSDFNIKGVITDDLLKSLLQRFNIATTVCFLADACHSGSLLDMNRQYTSKICTLSGDAELPGKIAYISGCRDPQTSADAYDQDSRTYQGVMTCARIKSQKINPATRTDVFKLVAEMRKLLRAQGYAQIPVLTASFDIPRAFSFIPY 248
BLAST of jgi.p|Trimin1|161921 vs. uniprot
Match: A0A836CI31_9STRA (Peptidase C14, caspase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI31_9STRA) HSP 1 Score: 298 bits (762), Expect = 6.070e-99 Identity = 151/246 (61.38%), Postives = 183/246 (74.39%), Query Frame = 1 Query: 7 KSKALCIGINYGKTANALQGCVNDAKNLQKLLVDSGAVAAEDITVLCEPTGEDICNAISKLAELSKSQDLDYIFISYSGHGTQIKDTTGDETDGKDEAICPADFGTRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTLSGEATLPGKIAYISGCRDTQTSADAFDQDSRQFTGAMTSALIKAHKVDEETHHDVFALVADMKKLLRAGGYSQIPVLSSSFDIPRQFAFIPH 744 KS+ALCIGINY +++ALQGC+NDAKNL LL SGAVA+ +I +LCE T I ++ LA+ K L Y FISYSGHGTQ+ D DETDGKDE ICP+DF GVITDD+LK + QF + TTVCFL DACHSGSMLDLN TY + + T+SG +L K+ ISGCRD QTSADAFDQ S +TGAMTSA++K+ K DV LVA+M+K+LRAGG+SQ PVLS+SF +PRQFAFIP+ Sbjct: 4 KSRALCIGINYTGSSSALQGCINDAKNLSALLNASGAVASANIQLLCEATAAQIHEGLTNLAQKCKDDKLTYAFISYSGHGTQVADLNKDETDGKDECICPSDFTKSGVITDDMLKDRIAQFPSWTTVCFLCDACHSGSMLDLNHTYVNSIDTVSGTNSLACKVVMISGCRDNQTSADAFDQSSSAYTGAMTSAMLKSLKNVFACRTDVIRLVAEMRKVLRAGGFSQYPVLSTSFTLPRQFAFIPY 249
BLAST of jgi.p|Trimin1|161921 vs. uniprot
Match: A0A836CKL4_9STRA (Putative caspase-1, p20 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKL4_9STRA) HSP 1 Score: 216 bits (550), Expect = 9.220e-67 Identity = 120/247 (48.58%), Postives = 158/247 (63.97%), Query Frame = 1 Query: 10 SKALCIGINYGKTANALQGCVNDAKNLQKLLVDSGAVAAEDITVLCEPTGEDICNAISKLAELSKSQDLDYIFISYSGHGTQIKDTTGDETDGKDEAICPADFGTRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTLSGEATLPGK-IAYISGCRDTQTSADAFDQDSRQFTGAMTSALIKAHKVDEETHHDVFALVADMKKLLRAGGYSQIPVLSSSFDIPRQFAFIPHL 747 S+AL + NY T L+GC ND L+ LV SGAV + VL E + D A+ LA S+ + L Y+FI+YSGHGTQ++D GDE DG DEAICP D T GV++DDLL+ + F T+V F+ DACHSGSMLDL +Y R C +G A+ G+ + ISGCRD+QTSADAF Q+ GA+T L+++ + E DVF LV + + L+ GG+ Q+PVLSSSF IPR+ AF+P L Sbjct: 3 SRALLLCNNYVGTDAELRGCHNDGDCLKAALVSSGAVPEGRVRVLREASAADAVAALEDLARRSREERLAYVFIAYSGHGTQVRDADGDEADGLDEAICPGDVETAGVVSDDLLRRVFAGFYYRTSVVFVCDACHSGSMLDLRFSYDGRRCADAGAASDVGRRVLMISGCRDSQTSADAF-LGGTQYGGALTDCLLRSLRDVPEARGDVFRLVHETCRRLKEGGFDQVPVLSSSFLIPRRHAFMPDL 248
BLAST of jgi.p|Trimin1|161921 vs. uniprot
Match: A0A6C0CTM3_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CTM3_9ZZZZ) HSP 1 Score: 177 bits (448), Expect = 1.850e-51 Identity = 108/245 (44.08%), Postives = 145/245 (59.18%), Query Frame = 1 Query: 7 KSKALCIGINYGKTANA-LQGCVNDAKNLQKLLVDSGAV----AAEDITVLCEPTGEDICNAISKLAELSKSQDLDYIFISYSGHGTQIKDTTGDETDGKDEAICPADFGTRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTL--SGEATLPGKIAYISGCRDTQTSADAFD-QDSRQFTGAMTSALIKAHKVDEETHHDVFALVADMKKLLRAGGYSQIPVLSSSFDI 717 KSKA+ GINY T A L+GCVND +N+ K L + A D + TG I N+I KLA S +LD ++I YSGHG I D GDE+DGKDE I PAD+ RGVITDDL+K +L+ FN T V + D CHSG++ DL Y + ++ I +SGC D QTSADA++ + R+F+GAMTS L+ A E + F + D+KK+LRA ++Q+P L+SSF + Sbjct: 2 KSKAILFGINYNNTPQARLRGCVNDVRNMAKFLKEKAKYDVVKAYTDDDDFNKVTGSYIINSIYKLAIDSHRHNLDRVWIHYSGHGCAINDRDGDESDGKDECIVPADYNYRGVITDDLIKRVLRYFNKRTQVTCIFDCCHSGTIGDLKYEYRDPHVYREENAKSKCQSNIMLLSGCMDHQTSADAYNVRGRREFSGAMTSCLLVAM----ENSSNAFEVFDDLKKMLRAKRFTQVPRLTSSFKV 242
BLAST of jgi.p|Trimin1|161921 vs. uniprot
Match: A0A835XKF2_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XKF2_9CHLO) HSP 1 Score: 172 bits (437), Expect = 2.440e-49 Identity = 100/257 (38.91%), Postives = 153/257 (59.53%), Query Frame = 1 Query: 7 KSKALCIGINYGKT-ANALQGCVNDAKNLQKLLVDS-GAVAAEDITVLCEPTGEDICNA------ISKLAELSKSQDLDYIFISYSGHGTQIKDTTGDETDGKDEAICPADFGTRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTL-SGEATLPGKIAYISGCRDTQTSADAFDQDS-RQFTGAMTSALIKAHKVDEETHHDVFALVADMKKLLRAGGYSQIPVLSSSFDI--PRQFAFIP 741 +++AL G+NY ++ALQGC+ND +N++ L++ GA D+ G +A +S+LA L+ +DL++++I YSGHGT++ D + DE DG DE + P+D+ T GVI DD L L +QFN T V + D+CHSG+++DL ++ R CT+ + + + I +SGC D+QTSADA++ D RQ+TGAMTS ++ + D F LV M+ LR ++Q P L SSF + P A +P Sbjct: 28 RARALLFGLNYAHMPSSALQGCINDVQNMKAYLMNRLGAELVCDVATDDTAAGRTATSAMGMTRKLSELAVLTYKEDLEFVWIHYSGHGTRVVDRSKDELDGYDECLVPSDYTTAGVIPDDYLAKLFEQFNPKTRVIAVFDSCHSGTVVDLKYSWEGRACTMENSNSRVRAPIMALSGCLDSQTSADAYNVDGQRQYTGAMTSVMLHVLQTTGAAADDAFLLVDAMRAHLREQNFTQWPKLCSSFSLVLPSSRAMLP 284
BLAST of jgi.p|Trimin1|161921 vs. uniprot
Match: A0A7M3UPF5_POV01 (Uncharacterized protein n=1 Tax=Pyramimonas orientalis virus TaxID=455367 RepID=A0A7M3UPF5_POV01) HSP 1 Score: 166 bits (421), Expect = 2.430e-47 Identity = 105/253 (41.50%), Postives = 149/253 (58.89%), Query Frame = 1 Query: 7 KSKALCIGINYGKTANA-LQGCVNDAKNLQKLLV-----DSGAVAAEDITVLCEPTGEDICNAISKLAELSKSQDLDYIFISYSGHGTQIKDTTG--DETDGKDEAICPADFGTRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTLSGE---ATLPGKIAYISGCRDTQTSADAFD-QDSRQFTGAMTSALIKAHKVDEETHHDVFALVADMKKLLRAGGYSQIPVLSSSFDIPRQF 729 KSKA+ GINY T A L+GCVND KN+ K L D V +++ + G+ I N++ KLA S L+ ++I +SGHGT ++D+ G DE+DG DE I P+D+ GVI DD +K +L+ FN T V + D CHSG++ DL Y T E + I ISGC D+QTSADAF+ Q RQ+TGAMTS L++ K E+ +F ++ ++ LLR + Q P+LSSSF++P+ + Sbjct: 2 KSKAILFGINYVNTPQARLRGCVNDVKNVAKYLTKEEKYDVVKVYSDEADET-KTRGQSIVNSMYKLAIDSHRYRLERVWIHFSGHGTHVRDSYGYRDESDGNDECIVPSDYNRCGVIRDDTIKRILRMFNPTTKVTCVFDCCHSGTIGDLKYVYKKIDRTPEIENNGSKCMANICLISGCTDSQTSADAFNVQGKRQYTGAMTSCLLEVLK--NESDKSIFNVLESLRDLLRQKRFPQYPLLSSSFEVPQNY 251
BLAST of jgi.p|Trimin1|161921 vs. uniprot
Match: A0A6C0E8Z1_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0E8Z1_9ZZZZ) HSP 1 Score: 159 bits (403), Expect = 1.600e-44 Identity = 97/242 (40.08%), Postives = 140/242 (57.85%), Query Frame = 1 Query: 16 ALCIGINYGKTANALQGCVNDAKNLQKLLVDSGAVAAEDITVLCE-------PTGEDICNAISKLAELSKSQDLDYIFISYSGHGTQIKDTTGDETDGKDEAICPADFGTRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYT--SRLCTLSGEATLPGKIAYISGCRDTQTSADAFDQDSRQFTGAMTSALIKAHKVDE--ETHHDVFALVADMKKLLRAGGYSQIPVLSSS 708 AL IGINY T+N L GC+ND N++ +L+ + AE+I V+ E PT +I N L + + I+ YSGHG+ I DT GDE DGKDE I P D+ G+I+DDLL + ++ +T L D CHSG++LDL Y ++ T + ++ + GK+ ISGC+D QTSADA +++GAMT+A +K+ ++ E T++ + L+ D LR Y QIP LSSS Sbjct: 5 ALLIGINYKGTSNELNGCINDVTNMRDVLIKNFGYLAENIVVMTEDQPNNLKPTALNIMNQFGSLIIKAHHKQAKEIWFHYSGHGSYIDDTNGDELDGKDEVIVPLDYEKSGMISDDLLHNYMEYLPVETRFFCLFDCCHSGTILDLKHRYLGGNKHHTENNKSKIKGKVVMISGCKDDQTSADALI--GTKWSGAMTAAFLKSMELCEYKTTYYHLLDLMRDY---LRENKYDQIPQLSSS 241
BLAST of jgi.p|Trimin1|161921 vs. uniprot
Match: A0A6C0M0H5_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0M0H5_9ZZZZ) HSP 1 Score: 150 bits (380), Expect = 4.250e-41 Identity = 93/241 (38.59%), Postives = 125/241 (51.87%), Query Frame = 1 Query: 4 GKSKALCIGINY-GKTANALQGCVNDAKNLQKLLVDSGAVAA----EDITVLCEPTGEDICNAISKLAELSKSQDLDYIFISYSGHGTQIKDTTGDETDGKDEAICPADFGTRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTLSGEATLPGKIAYISGCRDTQTSADA-FDQDSRQFTGAMTSALIKAHKVDEETHHDVFALVADMKKLLRAGGYSQIPVLSSS 708 GK KAL G+NY L+GCVND K++ L G ED+ ++ T + I I +LA S + LD + I YSGHG I+DT+GDE+DG DE +CP D + GVITDD L L+ FN T + + D CHSGS LDL Y + + + + ISGCRD QTSADA F +F+GA+T L+ KV G++Q+P++SSS Sbjct: 16 GKKKALLFGLNYTASEVGRLRGCVNDIKDMSVFLRGKGFEVEMYHDEDLDLVYGTTYDGIVRGIQRLAIASWKESLDAVVIHYSGHGYYIRDTSGDESDGYDECLCPTDMDSNGVITDDYLHELINSFNPKTRITVILDCCHSGSALDLPYCYKTSYDVVIEDKKCNVNVTMISGCRDNQTSADANFGTIYDKFSGALTKNLLDILKVQPNILP--IXXXXXXXXXXXXXGFNQLPMISSS 254 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161921 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_1433 ID=mRNA_1433|Name=jgi.p|Trimin1|161921|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=750bp|location=Sequence derived from alignment at Contig_18:1039181..1039930+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGGTAAATCGAAAGCGCTTTGCATTGGTATCAACTATGGCAAGACGGCback to top protein sequence of jgi.p|Trimin1|161921 >Trimin1|161921|e_gw1.18.320.1 ID=Trimin1|161921|e_gw1.18.320.1|Name=jgi.p|Trimin1|161921|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=250bp MGKSKALCIGINYGKTANALQGCVNDAKNLQKLLVDSGAVAAEDITVLCEback to top mRNA from alignment at Contig_18:1039181..1039930+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_1433 ID=mRNA_1433|Name=jgi.p|Trimin1|161921|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=750bp|location=Sequence derived from alignment at Contig_18:1039181..1039930+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_18:1039181..1039930+ >mRNA_1433 ID=mRNA_1433|Name=jgi.p|Trimin1|161921|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=750bp|location=Sequence derived from alignment at Contig_18:1039181..1039930+ (Tribonema minus UTEX_B_3156 )back to top |