mRNA_14234 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|351690
Unique Name	mRNA_14234
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

[Close]

BLAST of jgi.p|Trimin1|351690 vs. uniprot
Match: A0A836C6Z9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6Z9_9STRA)

HSP 1 Score: 290 bits (743), Expect = 8.030e-98
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 1

Query:  112 MAAMFEHVCRGFFIFLFLVAGSLHFVSPYKEDMANLVPPFYWNQMHLVYVSGVMELAGGIFLCTRHYRAAAGWLLFLLINITLQAHVYAQLYDVAPMASQTGGAIPSAGVWAARNALQAAWMAMLWYLWQGGNKPATKRA 531
            MAAMFEHVCRGFFIFLFLVAGSLHFVSPYKEDMANLVPPFYWNQMHLVYVSGVMELAGGIFLCTRHYRAAAGWLLFLLINITLQAHVYAQLYDVAPMASQTGGAIPSAGVWAARNALQAAWMAMLWYLWQGGNKPATKRA
Sbjct:    1 MAAMFEHVCRGFFIFLFLVAGSLHFVSPYKEDMANLVPPFYWNQMHLVYVSGVMELAGGIFLCTRHYRAAAGWLLFLLINITLQAHVYAQLYDVAPMASQTGGAIPSAGVWAARNALQAAWMAMLWYLWQGGNKPATKRA 140

[Close]

BLAST of jgi.p|Trimin1|351690 vs. uniprot
Match: UPI000E5B3E77 (hypothetical protein n=1 Tax=Chitinophaga alhagiae TaxID=2203219 RepID=UPI000E5B3E77)

HSP 1 Score: 60.5 bits (145), Expect = 6.680e-8
Identity = 41/136 (30.15%), Postives = 67/136 (49.26%), Query Frame = 1

Query:  103 CVNMAAMFEHVCRGFFIFLFLVAGSLHFVSPYKEDMANLVPPFYWNQMHLVYVSGVMELAGGIFLCTRHYRAAAGWLLFLLINITLQAHVYAQLYDVAPMASQTGGAIPSAGVWAARNALQAAWMAMLWYL-WQGG 507
            C+ M AM      G F+              Y   M  ++P F   +  LV+++G++E+AGGI L  +HYR  A  LL +   + L A++YA L+ +    + TGG  P   +W  R  +Q  ++A +W+  W+ G
Sbjct:   32 CIAMCAMLCFAALGHFL--------------YPAGMEMMMPSFIPFKKGLVFITGLLEIAGGIGLLFQHYRRTAALLLIIFFILVLPANIYAALHHINYQTATTGGPGPEY-LWL-RVPMQLVFIAWVWFFGWRRG 151

[Close]

BLAST of jgi.p|Trimin1|351690 vs. uniprot
Match: A0A5S4FCZ2_9ACTN (Uncharacterized protein n=1 Tax=Nonomuraea turkmeniaca TaxID=103838 RepID=A0A5S4FCZ2_9ACTN)

HSP 1 Score: 58.9 bits (141), Expect = 2.660e-7
Identity = 42/113 (37.17%), Postives = 58/113 (51.33%), Query Frame = 1

Query:  157 LFLVAGSLHFVS------PYKEDMANLVPPFYWNQMHLVYVSGVMELAGGIFLCTRHYRAAAGWLLFLLINITLQAHVYAQL--YDVAPMASQTGGAIPSAGV--WAARNALQ 465
            + ++  S HFV       P+  DM  +VPPF      +VY++GV+ELAG + L     R AAG  L LL  + L A+VYA L   DV P+  +    +   G+  WAAR   Q
Sbjct:   38 MLVMTASAHFVPAGVTFMPHHADMVAMVPPFVPFPALMVYLTGVLELAGAVGLVLEGTRRAAGICLALLFVLLLPANVYAALAGQDVTPLWQRVPEQVLYIGIALWAARTRTQ 150

[Close]

BLAST of jgi.p|Trimin1|351690 vs. uniprot
Match: UPI000DD2DE3B (DoxX family protein n=1 Tax=Glycomyces dulcitolivorans TaxID=2200759 RepID=UPI000DD2DE3B)

HSP 1 Score: 57.8 bits (138), Expect = 7.230e-7
Identity = 35/86 (40.70%), Postives = 49/86 (56.98%), Query Frame = 1

Query:  139 RGFFIFLFLVAGSLHFVSPYKEDMANLVPP-FYWNQMHLVYVSGVMELAGGIFLCTRHYRAAAGWLLFLLINITLQAHVYAQLYDV 393
            RG    LFL  G +HFV  ++E M  +VPP   W +  LV+V+GV+E+AG I L  R ++  A   L LL+     A++YA L  V
Sbjct:   33 RGGLTALFLTTGVVHFVPGFRESMIAMVPPGLPWPEA-LVFVTGVLEIAGAIGLWVRPFKRTAAVCLVLLMLAMFPANIYAALNGV 117

[Close]

BLAST of jgi.p|Trimin1|351690 vs. uniprot
Match: UPI0016613E48 (hypothetical protein n=1 Tax=Nonomuraea sp. SYSU D8015 TaxID=2593644 RepID=UPI0016613E48)

HSP 1 Score: 57.0 bits (136), Expect = 1.420e-6
Identity = 34/86 (39.53%), Postives = 47/86 (54.65%), Query Frame = 1

Query:  157 LFLVAGSLHFVS------PYKEDMANLVPPFYWNQMHLVYVSGVMELAGGIFLCTRHYRAAAGWLLFLLINITLQAHVYAQLYDVA 396
            + ++  S HFV       P   D+  +VPPF      +VY++GV+ELAG + L     R AAG  L LL  + L A+VYA L D+A
Sbjct:   38 MLVMTASAHFVPASVTFMPNHADLVAMVPPFVPLPAFMVYLTGVLELAGAVGLVLEGTRRAAGICLALLFVVLLPANVYAALADIA 123

[Close]

BLAST of jgi.p|Trimin1|351690 vs. uniprot
Match: UPI00082C0124 (hypothetical protein n=1 Tax=Microtetraspora niveoalba TaxID=46175 RepID=UPI00082C0124)

HSP 1 Score: 55.5 bits (132), Expect = 7.050e-6
Identity = 40/105 (38.10%), Postives = 52/105 (49.52%), Query Frame = 1

Query:   97 LKCVNMAAMFEHVCRGFFIFLFLVAGSLHFVS------PYKEDMANLVPPFYWNQMHLVYVSGVMELAGGIFLCTRHYRAAAGWLLFLLINITLQAHVYAQLYDV 393
            L  V  A +      G  + L + A S HFV       P   DM  +VPPF      +VY++GV+ELAG + L     R AAG  L LL  + L A+V+A L DV
Sbjct:   20 LGLVRFATLRVSAAHGLAVMLVMTA-SAHFVPSDVTFMPNHADMVAMVPPFVPFPAFVVYLTGVLELAGAVGLALPATRKAAGICLALLFALMLPANVHAALADV 123

[Close]

BLAST of jgi.p|Trimin1|351690 vs. uniprot
Match: A0A519D2X6_9EURY (Uncharacterized protein n=2 Tax=Archaea TaxID=2157 RepID=A0A519D2X6_9EURY)

HSP 1 Score: 53.9 bits (128), Expect = 1.010e-5
Identity = 32/91 (35.16%), Postives = 47/91 (51.65%), Query Frame = 1

Query:  121 MFEHVCRGFFIFLFLVAGSLHFVSPYKEDMANLVPPFYWNQMHLVYVSGVMELAGGIFLCTRHYRAAAGWLLFLLINITLQAHVYAQLYDV 393
            M  HV    +   F++ G  HF +P  +    +VPPF    + LVY++GVME+AGGI +     R  AG LL L +     A++Y    D+
Sbjct:    1 MLTHVLATIYGVAFILVGIAHFRNP--QLFVEIVPPFLPFPLFLVYLTGVMEIAGGIGIIHPASRVLAGRLLVLFLIAVFPANLYMWFSDI 89

[Close]

BLAST of jgi.p|Trimin1|351690 vs. uniprot
Match: A0A1G9TP32_9ACTN (Uncharacterized protein n=1 Tax=Nonomuraea jiangxiensis TaxID=633440 RepID=A0A1G9TP32_9ACTN)

HSP 1 Score: 54.3 bits (129), Expect = 1.490e-5
Identity = 38/92 (41.30%), Postives = 49/92 (53.26%), Query Frame = 1

Query:  157 LFLVAGSLHFVSPYKEDMAN------LVPPFYWNQMHLVYVSGVMELAGGIFLCTRHYRAAAGWLLFLLINITLQAHVYAQLYDVAPMASQT 414
            + ++  S HFV P    M N      +VPPF      +VY++GV+ELAG + L     R AAG  L LL  + L A+VYA L DV P A  T
Sbjct:   39 MLVMTASAHFVPPGVSFMPNHADLLAMVPPFVPFPAAVVYLTGVLELAGAVGLVLPGTRRAAGACLALLFVLLLPANVYAALADV-PFAGGT 129

[Close]

BLAST of jgi.p|Trimin1|351690 vs. uniprot
Match: A0A162BFH4_9GAMM (Uncharacterized protein n=2 Tax=Pseudoalteromonas luteoviolacea TaxID=43657 RepID=A0A162BFH4_9GAMM)

HSP 1 Score: 53.5 bits (127), Expect = 1.810e-5
Identity = 33/85 (38.82%), Postives = 48/85 (56.47%), Query Frame = 1

Query:  139 RGFFIFLFLVAGSLHFVS-PYKEDMANLVPPFYWNQMHLVYVSGVMELAGGIFLCTRHYRAAAGWLLFL-LINITLQAHVYAQLY 387
            R  F  LFL++G  HF + PY  D+   V P+   ++ L++VSG++ELAG + +         GWLL L L+ +TL  H Y  LY
Sbjct:   18 RFLFTSLFLLSGITHFTNAPYYLDLMPQVVPY---KVTLIWVSGIVELAGALMILFNWKARLGGWLLVLFLLPVTLVVHGYEMLY 99

[Close]

BLAST of jgi.p|Trimin1|351690 vs. uniprot
Match: A0A438MPE1_9ACTN (Putative membrane protein n=1 Tax=Nonomuraea polychroma TaxID=46176 RepID=A0A438MPE1_9ACTN)

HSP 1 Score: 53.9 bits (128), Expect = 1.830e-5
Identity = 37/102 (36.27%), Postives = 52/102 (50.98%), Query Frame = 1

Query:  157 LFLVAGSLHFVS------PYKEDMANLVPPFYWNQMHLVYVSGVMELAGGIFLCTRHYRAAAGWLLFLLINITLQAHVYAQLYDVAPMASQTGGAIPSAGVW 444
            + ++  S HFV       P   DM  +VPPF      +VY++GV+ELAG + L     R AAG  L +L    L A+V+A L DV      T G  P++ +W
Sbjct:   38 MLVMTASAHFVPAGVTFMPNHGDMVAMVPPFVPFPAFMVYLTGVLELAGAVGLMLERTRKAAGVCLAVLFVAMLPANVHAALNDV------TLGGEPASPLW 133

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|351690 vs. uniprot

BLAST of jgi.p|Trimin1|351690 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18


Match Name	E-value	Identity	Description
A0A836C6Z9_9STRA	8.030e-98	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
UPI000E5B3E77	6.680e-8	30.15	hypothetical protein n=1 Tax=Chitinophaga alhagiae...	[more]
A0A5S4FCZ2_9ACTN	2.660e-7	37.17	Uncharacterized protein n=1 Tax=Nonomuraea turkmen...	[more]
UPI000DD2DE3B	7.230e-7	40.70	DoxX family protein n=1 Tax=Glycomyces dulcitolivo...	[more]
UPI0016613E48	1.420e-6	39.53	hypothetical protein n=1 Tax=Nonomuraea sp. SYSU D...	[more]
UPI00082C0124	7.050e-6	38.10	hypothetical protein n=1 Tax=Microtetraspora niveo...	[more]
A0A519D2X6_9EURY	1.010e-5	35.16	Uncharacterized protein n=2 Tax=Archaea TaxID=2157...	[more]
A0A1G9TP32_9ACTN	1.490e-5	41.30	Uncharacterized protein n=1 Tax=Nonomuraea jiangxi...	[more]
A0A162BFH4_9GAMM	1.810e-5	38.82	Uncharacterized protein n=2 Tax=Pseudoalteromonas ...	[more]
A0A438MPE1_9ACTN	1.830e-5	36.27	Putative membrane protein n=1 Tax=Nonomuraea polyc...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_97	contig	Contig_97:445224..449661 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|351690\|estExt_Genemark1.C_Ctg_970046
Description	Membrane
COG category	S
Max annot lvl	976\|Bacteroidetes
EggNOG OGs	COG4270@1\|root,COG4270@2\|Bacteria,4PK6U@976\|Bacteroidetes,1FK9U@1100069\|Bacteroidetes Order II. Incertae sedis
Evalue	6.97e-10
Seed ortholog	1089550.ATTH01000002_gene80
Hectar predicted targeting category	signal peptide
TranscriptId	352012
Track	FilteredModels1
ProteinId	351690

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351690	gene_14234	Tribonema minus UTEX_B_3156	gene	Contig_97 445224..449661 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351690	Trimin1\|351690\|estExt_Genemark1.C_Ctg_970046	Tribonema minus UTEX_B_3156	polypeptide	Contig_97 445424..448257 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_14234_4	exon_14234_4	Tribonema minus UTEX_B_3156	exon	Contig_97 445224..445566 -
exon_14234_3	exon_14234_3	Tribonema minus UTEX_B_3156	exon	Contig_97 447095..447266 -
exon_14234_2	exon_14234_2	Tribonema minus UTEX_B_3156	exon	Contig_97 448150..448304 -
exon_14234_1	exon_14234_1	Tribonema minus UTEX_B_3156	exon	Contig_97 449598..449661 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_14234	UTR3_14234	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_97 445224..445423 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_14234	CDS_14234	Tribonema minus UTEX_B_3156	CDS	Contig_97 448150..448257 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_14234	UTR5_14234	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_97 449598..449661 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_97:445224..449661-
coding sequence from alignment at Contig_97:445224..449661-

spliced messenger RNA

>mRNA_14234 ID=mRNA_14234|Name=jgi.p|Trimin1|351690|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=734bp|location=Sequence derived from alignment at Contig_97:445224..449661- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCGAGCAACAAGTAAAATCGTTGCCTTGGTGACTGGAGTGAGCCGCTGTC
GACGTCCTTCTCAGATCGCCGCGGAGCTGCAGCGCCGCACATCAACTTGA
AGTGCGTCAACATGGCCGCCATGTTTGAACACGTGTGCCGCGGCTTCTTC
ATCTTCCTGTTCCTCGTCGCCGGCTCCCTTCACTTCGTTTCGCCGTACAA
GGAAGACATGGCGAACCTGGTCCCCCCCTTCTACTGGAACCAGATGCACC
TCGTGTACGTCTCGGGCGTCATGGAGCTGGCGGGGGGGATTTTTCTGTGC
ACCAGGCACTATCGCGCCGCGGCGGGCTGGCTACTGTTCCTGCTCATCAA
CATCACACTTCAGGCACACGTCTACGCGCAGCTCTACGATGTGGCCCCCA
TGGCGTCGCAGACGGGGGGCGCCATCCCCTCCGCCGGCGTGTGGGCAGCG
CGCAACGCCCTACAAGCCGCCTGGATGGCCATGCTGTGGTACCTGTGGCA
AGGGGGAAACAAGCCCGCCACCAAGAGGGCATGAGAGCAATGGCATTGCC
GCTGCCACCGCCGTCGCTGCCGCCGCTGCTGCCGCCGCCGCCGCTGCCGC
TGCACAGAGCACTGCTGCTGAGGACTGCAGCGCCTGGTTGAGTGCCGCTG
CTGCTGCTGTTGTGCAGTCCTACCATCTTGGTGTTCAGGGCCGTGCAAAA
GAAATGCGCTGAGGACCCCGAGGTGATATTTGAG

protein sequence of jgi.p|Trimin1|351690

>Trimin1|351690|estExt_Genemark1.C_Ctg_970046 ID=Trimin1|351690|estExt_Genemark1.C_Ctg_970046|Name=jgi.p|Trimin1|351690|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=141bp
MAAMFEHVCRGFFIFLFLVAGSLHFVSPYKEDMANLVPPFYWNQMHLVYV
SGVMELAGGIFLCTRHYRAAAGWLLFLLINITLQAHVYAQLYDVAPMASQ
TGGAIPSAGVWAARNALQAAWMAMLWYLWQGGNKPATKRA*

mRNA from alignment at Contig_97:445224..449661-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_14234 ID=mRNA_14234|Name=jgi.p|Trimin1|351690|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4438bp|location=Sequence derived from alignment at Contig_97:445224..449661- (Tribonema minus UTEX_B_3156 )
GCGAGCAACAAGTAAAATCGTTGCCTTGGTGACTGGAGTGAGCCGCTGTC
GACGTCCTTCTCAGGTAAGCTTCGCTTCATGCGCCATTCGGCATGACTCC
ATGACATTGTGCTTACGACGCTTAGCTCTGTGCTAGATTATCCAGGAGGC
GGCCCACATCCATGCACCGGTTGTTTTGTCTGTGCTGGCTCTCGTCCGTA
AGGCAGTGTCAACATTCAGTATCTTTCAAATGTGACCAGCTGTAACATTT
TGCTCCAGAACTTAGCTTTAGCTAAGTTACGCTCTGACGTGGGAATGTGC
TGCATACATAGCTCGTGCATGCTTGTACGCCGCATACTTACGCTTAATAA
CCTTGGTTTTTTGTGCTGCGTAGTACCCATGAGACGTGGTACCCTACCAC
ATCCATAATGCTCGAGAATCAAGCTTGCATATATATTGCACATGACTGTG
CCAAAGTCGTGTACACATGGTGTATGCAACTACTAATACTAGCAGGTGAA
TGGACTTGCATTTGTGAGACCCACAAAGATGGCCAACTGGCCAACTGGTC
AACTTGCGGCAACTTCAGCAGCTTCATCTAGCTTGCCTGTACTGTACACC
TTGCGAATAATTCTGGAGCAAACGGTCGTGTGTACGCCATGTACATGCCG
TTTTATTGATAAGGCGCATGGTACTCTGCAGCTCGCACTCACCGAGACCA
TAAGATGTACAAAATGTACTAGCAGCAACTGCCCAATTCAAGTCTGGCTG
TGACATGGCGATATAATGTGTGTACTACGTAGTACATGCTCTAATTTAGT
ATGTGCTGCAGATTGGCGTCCGTTATTGTCACGCGTGGATCGTTGCAGAG
CCGCAGCGGCCTACTAGCCGGTTGCCACTGGCATGCATGATGATTTTCCT
TCGAGATGGCACATGCACATGCTGCGGCAGCTGAGCTTCGCCAGCCACCG
AAATGCATCGACAGCGCTTGGACGCACAGCACAGTGAAAACTTGTCACTG
CGTCAGGCCATTGCCACCAAGAGGCGTGAACAGTGACAGGTCGTCTGAGA
AGCGAAGCTCAGCCTGCGGCGCACAGGGTCAGGGTTAGGGTTAGGTCGGT
GTTGAAGAACAGGTTTGGGGTCTTGGCGAGGGTTCAGCTCATTGACAAGT
TGCGTTGAAAGTCAGCCTGCGGCTGCCCCCTTGCGGCAAACTGGCTTAAC
AGTTGGCCTAGCGTCAGGTCAGGGTCAATGTTAGGCCTACGATTATGGTT
CGAGTCAGAAAATAAGTACCAACTCGTACTGACATCGGGTCCTCGTGTTG
TGTGCTTGCTGGCCTGACAAGTGGCATGTATGCTTGGTGCCCTGTGTCGC
CACGCAGATCGCCGCGGAGCTGCAGCGCCGCACATCAACTTGAAGTGCGT
CAACATGGCCGCCATGTTTGAACACGTGTGCCGCGGCTTCTTCATCTTCC
TGTTCCTCGTCGCCGGCTCCCTTCACTTCGTTTCGCCGTACAAGGAAGAC
ATGGCGAACCTGGTGCGTACCGCAACTGATTCTCGCTCTGGAGGTAAAAA
AGTATAAGTCTGGATGATGAAGAAACGATCACTACAAGGTGCCTCATGAC
ATGTCATCGTCACAGAATATTACTACGATGTTCAACAGTAAGCTTTTGAC
TCACCGCTGCGCATTTAGTACGTACACATTGACGTATCACAATCTATTTA
GATGATCCGTAGTTCATGAAGGGTACTTCATGAGCCTGCAGTACTTCGTG
AAGTCATTGTTGATGCACGAGTGGTTCTAGCATGGGGCACCAAAAGTATG
TTCCTGTGTGTATTACGCATGTGCGCGCGATTGTGCATGCTCCTTTGGCT
GGCGTGCCAGCAAGAACGATGGGCTCTTCCTCAGAGATCGCATTCATCTC
ATGCCCATGTCGATATCGATCATCTGCTATGTTGAAGACTCTGCTGTTGA
AGTGCGCATCACGCCACGGTGCTGCTGATATTGACGCAGTGGGCGACGCC
GAAGTGTCAGTGAAGTCTGCAAGAGGGGCAAGCTGCAATTGCAGTGACGT
GCCAACGAGTAGACAGGACCCTGCGGCGCTGCAGCATGCATCTACACAGA
CACCCATGATCTGCCACGTTGCTGTTTTTGCAGTCGCAGCATGCACCTGC
TGCCGCTTGAAGTACACACTGGGCGTTGGCGGAGTCATGCAGTTGGCTCA
GTCTACATTGCAACATCCGTGCCTCGAGGAGAGATAGTGCCACAGCAGCG
TACCAGTTCCAGGAATTGTTTGGAACTGACGCACGCGAAACCGCCTCGCC
GCCCGCAGGCCCCCCCCCTTTTACTGTAACCAGGTACAGCCCCCCCGTTT
GTGACTGACGCACGTGAAACGCCTGACGTGTAACCGCCCCCGCAGGTCCC
CCCCTTCTACTGGAACCAGATGCACCTCGTGTACGTCTCGGGCGTCATGG
AGCTGGCGGGGGGGATTTTTCTGTGCACCAGGCACTATCGCGCCGCGGCG
GGCTGGCTACTGTTCCTGCTCATCAACATCACACTTCAGGCACACGTCTA
CGCGCAGCTCTACGATGGTGAGGACTCCTTGCCCTACGTCTAACCCTAAC
CCTCACCCTAACCTTCCCCTAAATCTGCTTATCCTGCTCGTTAACATCAC
GCTTCAGGCGCACGTGTACGCGCAGCTCTACGGTGGTGAGGAACCCTAAC
TCTAGCCTTAACCCAAACCTCACCCTGCTTTTTCTGCTCATCAACATCAC
GCTTCAGACGCACGTGTACGCGCAGCTGTACAATGGTGAGGACCCCTTGC
GTACCATGCAGGTTCCGGACCTTTTTGTAGTCTGCAGACTCCGGAGGCGT
GCCCGGGGGCAGCGTTGCGCCTTTGGAAGTTGAAGGTGGTGCGTGTGCTG
TTGTGTTGGACAAGTTGGTGCATGTGACCGGAGGCGGCTCCAGGAAGTGA
GCGTGTTCAGCATACGCTGACGTTGCGCTGCGGAACACGAACTATGAAAA
AGACAACAGGGGTGTCAATTGCACCACTTCAAGCAATCATTGGCATGTGT
GCGCATCGATGTGCTCCTGAGCAACTGCAAAACCCCCTGAGAGGGCGTGG
CAGCCTCCAGACTACTGTCTCAGACTCTGCTATCAAAGTACACTCCAAAA
TGGTGCCGATGTGCATCTATCCAAGCACCCTAACCCTATCCTAACTCTAA
CTCCCCAAAAACTAATACTAACCCTAACCCTGATCGCGTGGAGCGCTGTC
ATGTGCCTCAAAGCACCAGTCTCTGAGGCGTGCGGGCTATGCAGCAGCAG
AGCTCAGCAGCAGTGAGTGGCAGATGCGCCTTGCGAAGCGTCCGACGTCT
GCAGCGCTCGACGCCGTCGCAGACCCTGCGAGGGTTGCCTAGCCTTGATC
CTAACCCTAGCAGTGAGCGCGCGCGCTCACCTCGGCGGAGCATTGCGCGG
CACTGTGGTGCGCAATCAGCAACAAGGAGGCGATCTGAGCTGAAGTTGAA
GATTGCGTCCGTACTTGTGAGAGCTGGTGATGCCATCGCAGACCCTGCTG
AGGGTCTCCCCCTTGCGGTCAGGGCTAGGGTCAGTTTCAGGTGCATATGC
GCGCTCAATTCTCTACCAGTGGAGGATCGTGCGATGCTCTGTGTGCATTC
AGCAACAAGGAGGCGATCTGAACATGCTGAAGTTGGAAATTGCGTCCGTA
CTTGTCAAAGCTCATGCCGCCGAAGGCTTTCGCTGTCGCTGCCGCTAAGT
ACTGCTGTACATATGATGCCTCATCCACCTGTGCCCCCCCCCCCCCCCCC
CCCCCTCTGACAGCCGCCTACGGCGCCATTGATGGGCGACGTCATGCCGT
CCGTCAGCGACGCAAGTTACGCACGGTGGACATGTGACCGACTGTTTCAT
CACATTTCGGCTGGTCAAACTCAGCAAATGACTGGTACTCGTGGTCATCA
CGCATGTACTCATGGCAAGTGTTTTTGATACAAGACGTGTAATTTTAGGA
TACAAGACGCACAGCTAGTTGTGCAGGCTGCTGAGCGCGAAGCCCCCCCC
CCCCCCATCCCCCCCCACCGCCCCACCCCCCCACCCCCTCCGCAGTGGCC
CCCATGGCGTCGCAGACGGGGGGCGCCATCCCCTCCGCCGGCGTGTGGGC
AGCGCGCAACGCCCTACAAGCCGCCTGGATGGCCATGCTGTGGTACCTGT
GGCAAGGGGGAAACAAGCCCGCCACCAAGAGGGCATGAGAGCAATGGCAT
TGCCGCTGCCACCGCCGTCGCTGCCGCCGCTGCTGCCGCCGCCGCCGCTG
CCGCTGCACAGAGCACTGCTGCTGAGGACTGCAGCGCCTGGTTGAGTGCC
GCTGCTGCTGCTGTTGTGCAGTCCTACCATCTTGGTGTTCAGGGCCGTGC
AAAAGAAATGCGCTGAGGACCCCGAGGTGATATTTGAG

Coding sequence (CDS) from alignment at Contig_97:445224..449661-

>mRNA_14234 ID=mRNA_14234|Name=jgi.p|Trimin1|351690|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=423bp|location=Sequence derived from alignment at Contig_97:445224..449661- (Tribonema minus UTEX_B_3156 )
ATGGCCGCCATGTTTGAACACGTGTGCCGCGGCTTCTTCATCTTCCTGTT
CCTCGTCGCCGGCTCCCTTCACTTCGTTTCGCCGTACAAGGAAGACATGG
CGAACCTGGTCCCCCCCTTCTACTGGAACCAGATGCACCTCGTGTACGTC
TCGGGCGTCATGGAGCTGGCGGGGGGGATTTTTCTGTGCACCAGGCACTA
TCGCGCCGCGGCGGGCTGGCTACTGTTCCTGCTCATCAACATCACACTTC
AGGCACACGTCTACGCGCAGCTCTACGATGTGGCCCCCATGGCGTCGCAG
ACGGGGGGCGCCATCCCCTCCGCCGGCGTGTGGGCAGCGCGCAACGCCCT
ACAAGCCGCCTGGATGGCCATGCTGTGGTACCTGTGGCAAGGGGGAAACA
AGCCCGCCACCAAGAGGGCATGA