mRNA_141 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|157495 vs. uniprot
Match: A0A835Z664_9STRA (J domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z664_9STRA) HSP 1 Score: 669 bits (1725), Expect = 5.200e-243 Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 1 Query: 1 MFFGGGFPQTSTDDSHYRALGLNRDATQVDIKKAYRQIALKHHPDKNQNAESADIFKAANAAYEVLSDSERKQHYDSFGLQQPPQQNVNPHDMFAQFFNMQPRQTPATIHEVTMTFEEIFAGKHYKMRVNVDIECPTCLKSCSTCQGSGVQVCMRELAPGFIQRIETMCLDCNGQRKSASKVCKSCNGKGTTLSSQNIEFDVPPGASSGDSFAFKGANGNGGDIVFVTKLEPHNVFKRQGLNLHMSKTLTLVESLCGFTFDVTKLDGTTVHVNREREVTKPQATHIIKKAGFRCGADCGDIIITFMVEFPKSVDESRHIAESLMRLLNR 987 MFFGGGFPQTSTDDSHYRALGLNRDATQVDIKKAYRQIALKHHPDKNQNAESADIFKAANAAYEVLSDSERKQHYDSFGLQQPPQQNVNPHDMFAQFFNMQPRQTPATIHEVTMTFEEIFAGKHYKMRVNVDIECPTCLKSCSTCQGSGVQVCMRELAPGFIQRIETMCLDCNGQRKSASKVCKSCNGKGTTLSSQNIEFDVPPGASSGDSFAFKGANGNGGDIVFVTKLEPHNVFKRQGLNLHMSKTLTLVESLCGFTFDVTKLDGTTVHVNREREVTKPQATHIIKKAGFRCGADCGDIIITFMVEFPKSVDESRHIAESLMRLLNR Sbjct: 1 MFFGGGFPQTSTDDSHYRALGLNRDATQVDIKKAYRQIALKHHPDKNQNAESADIFKAANAAYEVLSDSERKQHYDSFGLQQPPQQNVNPHDMFAQFFNMQPRQTPATIHEVTMTFEEIFAGKHYKMRVNVDIECPTCLKSCSTCQGSGVQVCMRELAPGFIQRIETMCLDCNGQRKSASKVCKSCNGKGTTLSSQNIEFDVPPGASSGDSFAFKGANGNGGDIVFVTKLEPHNVFKRQGLNLHMSKTLTLVESLCGFTFDVTKLDGTTVHVNREREVTKPQATHIIKKAGFRCGADCGDIIITFMVEFPKSVDESRHIAESLMRLLNR 329
BLAST of jgi.p|Trimin1|157495 vs. uniprot
Match: K3XBN2_GLOUD (Uncharacterized protein n=22 Tax=Oomycota TaxID=4762 RepID=K3XBN2_GLOUD) HSP 1 Score: 201 bits (511), Expect = 9.640e-58 Identity = 129/350 (36.86%), Postives = 188/350 (53.71%), Query Frame = 1 Query: 4 FFGGGF--------PQTSTD-DSHYRALGLNRDATQVDIKKAYRQIALKHHPDKNQNAESADIFKAANAAYEVLSDSERKQHYDSFGLQ--QPPQQNVNPHDMFAQFFN--------MQPRQTPATIHEVTMTFEEIFAGKHYKMRVNVDIECPTCL---------KSCSTCQGSGVQVCMRELAPGFIQRIETMCLDCNGQRKSA--SKVCKSCNGKGTTLSSQNIEFDVPPGASSGDSFAFKGANGNG-----GDIVFVTKLEPHNVFKRQGLNLHMSKTLTLVESLCGFTFDVTKLDGTTVHVN-REREVTKPQATHIIKKAGFRCGADC---GDIIITFMVEFPKS 936 FFGG F PQ + D D Y ALG+ + AT +IKKAYR++ALK+HPDK + E +FK AYEVLSD E+++ YD +G + Q + D+F+QFF P++ H + ++ E+++ GK K+ VN D+ C C K+C TCQG G++V +R++APG +Q+++++C DC GQ KS S CK C GK T + +E + G +G F G GDI+FV + + H F+R+G NL M K +TLVE+LCGF V LDG +H+ R E+ KP + G + G ++I F V+FP+S Sbjct: 9 FFGGDFGGGHGHGGPQKAVDNDKFYEALGVPKTATGDEIKKAYRKLALKNHPDKGGDPE---LFKTITVAYEVLSDPEKRELYDQYGEEGLQNGGGGGDASDLFSQFFRGAQGGRRRTGPQKGEDLTHPLKVSLEDLYNGKTVKLAVNRDVLCSRCEGRGGAEGAEKTCDTCQGRGMRVQLRQIAPGMVQQMQSVCPDCRGQGKSIRESDRCKHCKGKKVTKERKVLEVHIEKGMRNGQRITFSGEADQAPGTVPGDIIFVVQEKEHATFQRKGANLIMEKKITLVEALCGFEMIVEHLDGRHLHIKTRPGEIIKPNQFKAVHGEGMPTHGNPFVKGQLVILFKVQFPES 355
BLAST of jgi.p|Trimin1|157495 vs. uniprot
Match: A0A067CDA0_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067CDA0_SAPPC) HSP 1 Score: 201 bits (510), Expect = 1.320e-57 Identity = 132/346 (38.15%), Postives = 188/346 (54.34%), Query Frame = 1 Query: 10 GGGFPQTSTDDSH-YRALGLNRDATQVDIKKAYRQIALKHHPDKNQNAESADIFKAANAAYEVLSDSERKQHYDSFG---LQQPPQQNVNPHDMFAQFFN---MQPRQTPA---TIHEVTMTFEEIFAGKHYKMRVNVDIECPTCL---------KSCSTCQGSGVQVCMRELAPGFIQRIETMCLDCNGQRKSASKV--CKSCNGKGTTLSSQNIEFDVPPGASSGDSFAFKG----ANGN-GGDIVFVTKLEPHNVFKRQGLNLHMSKTLTLVESLCGFTFDVTKLDGTTVHVN-REREVTKPQATHIIKKAGFRCGADC---GDIIITFMVEFPKSV--DESR 951 G G P+ + D+S Y LG+ +DAT +IKKA+R++ALK+HPDK + E +FK AYE LSD E+++ YD FG LQQ D+F+Q F QPR P H + ++ E+++ GK K+ VN D+ C C K CSTC G G+++ R++APG +Q+++++C DC GQ K+ CK C G T + +E + G +G FKG A G GDIVFV + + H F+R+G NL M K +TLVE+LCGF V LDG +HV + EV KP + G + G ++I F +EFP SV D++R Sbjct: 21 GHGMPRGNVDNSKFYETLGVAKDATAAEIKKAFRKLALKNHPDKGGDPE---LFKDITVAYETLSDPEKREIYDKFGEEGLQQGXXXXXXXADIFSQMFGGGMRQPRGPPRGEDLTHPLKVSLEDLYNGKTVKLAVNRDVVCAGCSGKGGPDGAEKMCSTCNGRGMRIQHRQIAPGMVQQVQSVCPDCRGQGKTIRDADRCKGCKGNKVTKERKVLEVHIEKGMRNGQRITFKGEADQAPGTIAGDIVFVVQEKEHATFQRKGANLIMEKKITLVEALCGFETIVEHLDGRHLHVKTKPGEVIKPNQFKAVHGEGMPQHGNPFVKGQLVILFKIEFPTSVSADQAR 363
BLAST of jgi.p|Trimin1|157495 vs. uniprot
Match: A0A1V9Z143_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z143_9STRA) HSP 1 Score: 196 bits (499), Expect = 4.860e-56 Identity = 127/355 (35.77%), Postives = 193/355 (54.37%), Query Frame = 1 Query: 4 FFGGG-----FPQTSTDDSHYRALGLNRDATQVDIKKAYRQIALKHHPDKNQNAESADIFKAANAAYEVLSDSERKQHYDSFG---LQQPPQQNVNPHDMFAQFFN---MQPRQTPAT---IHEVTMTFEEIFAGKHYKMRVNVDIECPTC---------LKSCSTCQGSGVQVCMRELAPGFIQRIETMCLDCNGQRKSASKV--CKSCNGKGTTLSSQNIEFDVPPGASSGDSFAFKGANGNG-----GDIVFVTKLEPHNVFKRQGLNLHMSKTLTLVESLCGFTFDVTKLDGTTVHVN-REREVTKPQATHIIKKAGFRCGADC---GDIIITFMVEFPKSV--DESRHIA 960 FFGGG P+++ + +Y LG+ + A++ DIKKA+R++ALK+HPDK + E +FK AYEVLSD E+++ YD +G LQ N D+F Q F Q R P + H + ++ E+++ GK K+ VN DI C TC +SC G G+++ R++APG +Q+++++C DC GQ K ++ C SC GK T + +E + PG G FKG + GDIVF+ + + H+ F+R+G NL M K ++LVE+LCGF + LDG +HV + EV KP + G + G ++I F VEFP ++ D+ R +A Sbjct: 9 FFGGGGHGGASPKSADNSKYYELLGVPKTASEADIKKAFRKLALKNHPDKGGDPE---LFKDITVAYEVLSDPEKRELYDKYGEEGLQGGXXXXXNAADIFGQMFGGGMRQQRGPPRSEDLTHPLKVSLEDLYNGKMVKLAVNRDIICNTCDGRGGKSGAERSCDXXXGRGMRIQHRQIAPGMVQQVQSVCPDCRGQGKIINEADRCSSCKGKKVTKERKVLEVHIEPGMRHGQRITFKGESDQAPGVVPGDIVFIVQEKEHDTFQRKGPNLIMEKKISLVEALCGFECMIEHLDGRHLHVKTKPGEVIKPNQFKAVHGEGMPQHGNPFVKGQLVILFKVEFPDTLSRDQKRVLA 360
BLAST of jgi.p|Trimin1|157495 vs. uniprot
Match: A0A485KLS9_9STRA (Aste57867_8971 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLS9_9STRA) HSP 1 Score: 193 bits (490), Expect = 1.170e-54 Identity = 128/348 (36.78%), Postives = 187/348 (53.74%), Query Frame = 1 Query: 4 FFGGGF-------PQTSTDD-SHYRALGLNRDATQVDIKKAYRQIALKHHPDKNQNAESADIFKAANAAYEVLSDSERKQHYDSFGLQQPPQQNVNPH---DMFAQFFN-----MQPRQTPATIHEVTMTFEEIFAGKHYKMRVNVDIECPTCL---------KSCSTCQGSGVQVCMRELAPGFIQRIETMCLDCNGQRKSASKV--CKSCNGKGTTLSSQNIEFDVPPGASSGDSFAFKG----ANG-NGGDIVFVTKLEPHNVFKRQGLNLHMSKTLTLVESLCGFTFDVTKLDGTTVHVNRER-EVTKPQATHIIKKAGFRCGADC---GDIIITFMVEFPKSV 939 FFGGGF P D+ S Y LG+ ++A+ DIKKAYR++ALK+HPDK + E +FK AYE LSD ++++ YD +G + Q H D+F+Q F P++ H + ++ E+++ GK K+ VN D+ C C SC+TC G G++V +R++APG +Q+++++C DC GQ KS + CK C G T + +E + G G FKG A G GDIVFV + + H+VF+R+G NL M + ++LVE+LCGF V LDG +HV EV KP + G + G ++I F VEFP +V Sbjct: 12 FFGGGFEGHGHGGPSKPVDNTSFYETLGVPKNASAADIKKAYRKLALKNHPDKGGDPE---LFKNITVAYEALSDPDKRELYDKYGEEGLQQGGGGGHPGADIFSQMFGGGGRQRGPQRGEDLTHPLKVSLEDLYNGKTVKLAVNRDVLCGGCSGRGGPEGAETSCNTCNGRGMRVQLRQIAPGMVQQVQSVCPDCRGQGKSIREADRCKVCKGNKVTKERKVLEVHIEKGMRHGQRITFKGEADQAPGVQAGDIVFVVQEKEHSVFQRKGGNLIMEQKISLVEALCGFETIVEHLDGRHLHVKSVAGEVIKPNQFKAVHGEGMPQHGNPFVKGQLVILFKVEFPNTV 356
BLAST of jgi.p|Trimin1|157495 vs. uniprot
Match: A0A6G0WI92_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WI92_9STRA) HSP 1 Score: 192 bits (487), Expect = 3.110e-54 Identity = 127/356 (35.67%), Postives = 189/356 (53.09%), Query Frame = 1 Query: 4 FFGGGF-------PQTSTDDS-HYRALGLNRDATQVDIKKAYRQIALKHHPDKNQNAESADIFKAANAAYEVLSDSERKQHYDSFGLQQPPQQNVNPH---DMFAQFFNMQ-------PRQTPATIHEVTMTFEEIFAGKHYKMRVNVDIECPTCL---------KSCSTCQGSGVQVCMRELAPGFIQRIETMCLDCNGQRKSA--SKVCKSCNGKGTTLSSQNIEFDVPPGASSGDSFAFKGANGNG-----GDIVFVTKLEPHNVFKRQGLNLHMSKTLTLVESLCGFTFDVTKLDGTTVHVNR-EREVTKPQATHIIKKAGFRCGADC---GDIIITFMVEFPKSV--DESR 951 FFG G+ P D+S +Y LG+ + A+ DIKKAYR++ALK+HPDK + E +FK AYEVLSD E+++ YD +G ++ QQ H D+F+Q F + P + H + ++ E+++ GK K+ VN D+ C +C +C+TC G G+++ MR++ PG +Q+++++C DC GQ K+ S CK C G T + +E + G +G F G GDI+FV + + H VF+R+G NL M K +TLVESLCGF V LDG +H+ EV KP + G + G ++I F VEFP + D+SR Sbjct: 9 FFGSGYDGHGHGGPSKPVDNSAYYETLGVPKTASAADIKKAYRKLALKNHPDKGGDPE---LFKNITVAYEVLSDPEKRELYDQYG-EEGLQQGGGGHPGADIFSQMFGGRGGQRSRGPARGEDLTHPLKVSLEDLYNGKTVKLAVNRDVLCGSCFGRGGPEGAETTCNTCNGRGMRIQMRQIGPGMVQQVQSVCPDCRGQGKTIRESDKCKVCKGNKVTKERKVLEVHIEKGMRNGQRITFSGEADQAPGTIPGDIIFVVQEKEHAVFQRKGGNLIMEKKITLVESLCGFETIVEHLDGRQLHIKSIAGEVIKPNQFKAVNGEGMPQHGNPFVKGQLVILFKVEFPTKLTPDQSR 360
BLAST of jgi.p|Trimin1|157495 vs. uniprot
Match: A0A1W0A380_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A380_9STRA) HSP 1 Score: 191 bits (485), Expect = 6.280e-54 Identity = 126/348 (36.21%), Postives = 187/348 (53.74%), Query Frame = 1 Query: 4 FFGG----------GFPQTSTDDSHYRALGLNRDATQVDIKKAYRQIALKHHPDKNQNAESADIFKAANAAYEVLSDSERKQHYDSFGLQQPPQQNVNPH---DMFAQFFN---MQPRQTPA---TIHEVTMTFEEIFAGKHYKMRVNVDIECPTCL---------KSCSTCQGSGVQVCMRELAPGFIQRIETMCLDCNGQRKSA--SKVCKSCNGKGTTLSSQNIEFDVPPGASSGDSFAFKG----ANGN-GGDIVFVTKLEPHNVFKRQGLNLHMSKTLTLVESLCGFTFDVTKLDGTTVHVN-REREVTKPQATHIIKKAGFRCGADC---GDIIITFMVEFP 930 FFGG G P+ + Y LG+++DA+ DIKKA+R++ALK+HPDK + E +FK AYE LSD E+++ YD +G ++ QQ P D+F+Q F QPR P H + ++ E+++ GK K+ VN D+ C C K+C TC G G+++ R++APG +Q+++++C DC GQ K+ S CK+C G T + +E + G + FKG A G GDIVFV + + H +F+R+G NL M K ++LVE+LCGF + LDG +HV + EV KP I G + G ++I F V+FP Sbjct: 9 FFGGSXXXXXXGGFGAPKNVDNSKFYNVLGVSKDASAADIKKAFRKLALKNHPDKGGDPE---LFKDITVAYETLSDPEKRELYDKYG-EEGLQQGGGPSAGADIFSQMFGGGMRQPRGPPRGEDLTHPLKVSLEDLYNGKTVKLAVNRDVICSGCXXXXXXXXXXKTCDTCNGRGMRIQHRQIAPGMVQQVQSVCPDCRGQGKTIRESDRCKACKGNKVTKERKVLEVHIEKGMRNNQRITFKGEADQAPGTIAGDIVFVVQEKEHALFQRKGANLIMEKKISLVEALCGFETIIEHLDGRHLHVKTKPGEVIKPNQFKAIHGEGMPQHGNPFVKGQLVILFKVDFP 352
BLAST of jgi.p|Trimin1|157495 vs. uniprot
Match: A0A2D4BE28_PYTIN (Uncharacterized protein n=3 Tax=Pythium TaxID=4797 RepID=A0A2D4BE28_PYTIN) HSP 1 Score: 190 bits (483), Expect = 1.210e-53 Identity = 126/361 (34.90%), Postives = 189/361 (52.35%), Query Frame = 1 Query: 4 FFGGGF------PQTSTDDS-HYRALGLNRDATQVDIKKAYRQIALKHHPDKNQNAESADIFKAANAAYEVLSDSERKQHYDSFGLQ--QPPQQNVNPHDMFAQFFNMQPRQTPAT------IHEVTMTFEEIFAGKHYKMRVNVDIECPTCL---------KSCSTCQGSGVQVCMRELAPGFIQRIETMCLDCNGQRKSASKV--CKSCNGKGTTLSSQNIEFDVPPGASSGDSFAFKGANGNG-----GDIVFVTKLEPHNVFKRQGLNLHMSKTLTLVESLCGFTFDVTKLDGTTVHVN-REREVTKPQATHIIKKAGFRCGADC---GDIIITFMVEFPKSVDESRHIAESLMRLL 981 FFGGGF P D++ +Y LG+ ++AT DIKKAYR++ALK+HPDK + E +FK AYEVLSD E+++ YD +G + Q + D+F+QFF PR+ H + ++ E+++ GK K+ VN D+ C C K C TC G G++V MR+L PG +Q+++++ Q K+ + CK+C GK T + +E + G G F G GDI+FV + + H++F+R+G NL M K ++LVE+LCGF V LDG +HV R E+ KP + G + G ++I F V+FP+S S +L +L Sbjct: 9 FFGGGFEGGQMPPSKPVDNNKYYETLGVPKNATAADIKKAYRKLALKNHPDKGGDPE---LFKQITVAYEVLSDQEKRELYDQYGEEGLQNGGGAADASDLFSQFFRGGPRRRTGPQKGEDLTHPLKVSLEDLYNGKTVKLAVNRDVLCGRCEGRGGAEGAEKVCDTCHGRGMRVQMRQLGPGMVQQMQSVXXXXXXQGKTIREADRCKACKGKKVTKERKVLEVHIEKGMRHGQRITFAGEADQAPGTIPGDIIFVVQEKEHSIFQRKGGNLIMEKKISLVEALCGFEMIVEHLDGRHLHVKTRPGEIIKPNQFKAVHGEGMPTHGNPFVKGQLVIVFKVQFPESGSLSEKQLSTLKAVL 366
BLAST of jgi.p|Trimin1|157495 vs. uniprot
Match: T0QXT5_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QXT5_SAPDV) HSP 1 Score: 190 bits (482), Expect = 1.620e-53 Identity = 127/355 (35.77%), Postives = 190/355 (53.52%), Query Frame = 1 Query: 4 FFGG-----GFPQTSTDDS-HYRALGLNRDATQVDIKKAYRQIALKHHPDKNQNAESADIFKAANAAYEVLSDSERKQHYDSFG---LQQPPQQNVNPHDMFAQFFN---MQPRQTPA---TIHEVTMTFEEIFAGKHYKMRVNVDIECPTCL---------KSCSTCQGSGVQVCMRELAPGFIQRIETMCLDCNGQRKSASKV--CKSCNGKGTTLSSQNIEFDVPPGASSGDSFAFKGANGNG-----GDIVFVTKLEPHNVFKRQGLNLHMSKTLTLVESLCGFTFDVTKLDGTTVHVN-REREVTKPQATHIIKKAGFRCGADC---GDIIITFMVEFPKSV--DESRHI 957 FFGG G P+ + D+S +Y LG+ + A++VDIKKA+R++ALK+HPDK + D+FK AYEVLSD E+++ YD FG LQQ D+F+Q F QPR P H + ++ E+++ GK K+ VN D+ C C KS +++ R++APG +Q+++++C DC GQ K+ + CK+C G T + +E + PG +G FKG GDIVFV + + H F+R+G NL M K ++LVE+LCGF + LDG +H+ + EV KP ++ G + G ++I F VEFP + D+ R I Sbjct: 9 FFGGDGHGHGAPRGNVDNSKYYETLGVPKTASEVDIKKAFRKLALKNHPDKGGDP---DLFKEITVAYEVLSDPEKREVYDKFGEEGLQQGGXXXXXXADIFSQMFGGGMRQPRGPPRGEDLTHPLKVSLEDLYNGKMVKLAVNRDVLCGACEGRGGKAGAEKSXXXXXXXXMRIQHRQIAPGMVQQVQSVCPDCRGQGKTINDADRCKACKGNKVTKERKVLEVHIEPGMRNGQRITFKGEADQAPGAIAGDIVFVVQEKEHATFQRKGANLIMEKKISLVEALCGFECYIEHLDGRHLHIKTKPGEVIKPNQFKAVQGEGMPQHGNPFVKGQLVILFKVEFPAQMTRDQQRRI 360
BLAST of jgi.p|Trimin1|157495 vs. uniprot
Match: A0A836CFV4_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV4_9STRA) HSP 1 Score: 188 bits (478), Expect = 3.640e-53 Identity = 133/353 (37.68%), Postives = 183/353 (51.84%), Query Frame = 1 Query: 49 YRALGLNRDATQVDIKKAYRQIALKHHPDKNQNAESADIFKAANAAYEVLSDSERKQHYDSFGLQQ-PPQQNVNPH-DMFAQFF--------NMQP----------RQTPATIHEVTMTFEEIFAGKHYKMRVNVDIECPTC---------LKSCSTCQGSGVQVCMRELAPGFIQRIETMCLDCNGQRK--SASKVCKSCNGKGTTLSSQNIEFDVPPGASSGDSFAFKGA-----NGNGGDIVFVTKLEPHNVFKRQGLNLHMSKTLTLVESLCGFTFDVTKLDGTTVHV-NREREVTKPQATHIIKKAGFRC---GAD--CGDIIITFMVEFPKSVDESRHIAESLMRLL 981 Y LG+ +DA + IKKAYR++AL+HHPDK+ E FK+ + AYEVLSD E+++ YD FG P + NP D+F QFF N P TP H + +T ++IF GK ++M VN +I C +C + C C G GVQ MR +APG +QR+++MC C G+ K G Q I+ +PPG + F F+ + G++VFV + + H V+KR G NL M KTL++ ESLCGF F V ++G V V + E EVTKP ++K AG G D G +IITF V FP +D A+ L+R L Sbjct: 5 YTILGVEKDAEIIVIKKAYRKLALQHHPDKSGCPEK---FKSISHAYEVLSDPEKRKLYDQFGEDSFKPNFSPNPPPDVFQQFFGGGFSNSSNGFPGFFATATGGGNATPDIFHPLRVTLDDIFRGKTFRMCVNRNIVCRSCDGTGAPPGQARKCVGCAGIGVQHSMRAIAPGLMQRMQSMCPMCGGKGVCVDGDKXXXXXXGARVVADKQTIDVHMPPGTADQHRFVFRNLADECPGKSPGNVVFVVQTKEHPVYKRHGQNLIMRKTLSITESLCGFEFSVPHINGANVWVRSAEGEVTKPNTIKVLKDAGLPACPTGQDKEMGHMIITFAVAFPDRLDN----ADELLRYL 350 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157495 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_141 ID=mRNA_141|Name=jgi.p|Trimin1|157495|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=990bp|location=Sequence derived from alignment at Contig_3:563460..564449- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTTTTTTGGCGGAGGGTTTCCCCAGACGAGCACTGATGACAGCCATTAback to top protein sequence of jgi.p|Trimin1|157495 >Trimin1|157495|e_gw1.3.388.1 ID=Trimin1|157495|e_gw1.3.388.1|Name=jgi.p|Trimin1|157495|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=330bp MFFGGGFPQTSTDDSHYRALGLNRDATQVDIKKAYRQIALKHHPDKNQNAback to top mRNA from alignment at Contig_3:563460..564449- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_141 ID=mRNA_141|Name=jgi.p|Trimin1|157495|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=990bp|location=Sequence derived from alignment at Contig_3:563460..564449- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_3:563460..564449- >mRNA_141 ID=mRNA_141|Name=jgi.p|Trimin1|157495|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=990bp|location=Sequence derived from alignment at Contig_3:563460..564449- (Tribonema minus UTEX_B_3156 )back to top |