mRNA_14083 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|76912
Unique NamemRNA_14083
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|76912 vs. uniprot
Match: A0A836CCC3_9STRA (Acid phosphatase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCC3_9STRA)

HSP 1 Score: 522 bits (1344), Expect = 3.570e-185
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 2 
Query:   11 MRCLAWVLPAAAIALALRASDAFIAPPPQQRYLHSTTDVQRCSMMAKAKKGPAKARPKGTPVNIDVVTPFKLTQPSVIPEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPFQIGALAEIPNVVPRLVVFDLDKTCWLPEMFQLKGAPFRVAAGRVLDREGTEVALRPDVRNVLEELYTHPGLSSTRIACASRTNRGNWSRQVMELFVVFDGLLMSELFDFVEIQPGDKTAHFDELTTLSKVPYDEMLFFDDWERNIKDVSPLGVTCIHCPEGLTKQLWRQGLQKYASRKQ 901
            MRCLAWVLPAAAIALALRASDAFIAPPPQQRYLHSTTDVQRCSMMAKAKKGPAKARPKGTPVNIDVVTPFKLTQPSVIPEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPFQIGALAEIPNVVPRLVVFDLDKTCWLPEMFQLKGAPFRVAAGRVLDREGTEVALRPDVRNVLEELYTHPGLSSTRIACASRTNRGNWSRQVMELFVVFDGLLMSELFDFVEIQPGDKTAHFDELTTLSKVPYDEMLFFDDWERNIKDVSPLGVTCIHCPEGLTKQLWRQGLQKYASRKQ
Sbjct:    1 MRCLAWVLPAAAIALALRASDAFIAPPPQQRYLHSTTDVQRCSMMAKAKKGPAKARPKGTPVNIDVVTPFKLTQPSVIPEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPFQIGALAEIPNVVPRLVVFDLDKTCWLPEMFQLKGAPFRVAAGRVLDREGTEVALRPDVRNVLEELYTHPGLSSTRIACASRTNRGNWSRQVMELFVVFDGLLMSELFDFVEIQPGDKTAHFDELTTLSKVPYDEMLFFDDWERNIKDVSPLGVTCIHCPEGLTKQLWRQGLQKYASRKQ 297
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BLAST of jgi.p|Trimin1|76912 vs. uniprot
Match: A0A6H5JAJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAJ8_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 4.810e-51
Identity = 86/177 (48.59%), Postives = 115/177 (64.97%), Query Frame = 2 
Query:  374 ALAEIPNVVPRLVVFDLDKTCWLPEMFQLKGAPF-RVAAGRVLDREGTEVALRPDVRNVLEELYTHPGLSSTRIACASRTNRGNWSRQVMELFVVFDGLLMSELFDFVEIQPGDKTAHFDELTTLSKVPYDEMLFFDDWERNIKDVSPLGVTCIHCPEGLTKQLWRQGLQKYASRKQ 901
            A  E   +VPRLVV DLD T W PE++Q++GAPF +   G+V DR G  + L P VR  L E++       T++A ASRT+   W+RQVM L  +  GLLM  +F F EI  G K  HF E+   SKVPY+EM+FFDDW++N KDV  LGVTC+ C  GL +++W +GL K+A+ K+
Sbjct:   82 AAEESDGIVPRLVVMDLDYTLWKPELYQMRGAPFTKEKDGKVRDRSGEVIDLFPGVREALLEVHRGHRFRDTKLAIASRTSHERWARQVMGLIELEPGLLMRSVFSFTEIYSGSKVRHFGEIRRNSKVPYEEMIFFDDWDQNCKDVGKLGVTCVECRRGLIREVWTRGLAKFAAAKE 258
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BLAST of jgi.p|Trimin1|76912 vs. uniprot
Match: A0A7S2V3W0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3W0_9STRA)

HSP 1 Score: 173 bits (438), Expect = 8.150e-49
Identity = 84/165 (50.91%), Postives = 111/165 (67.27%), Query Frame = 2 
Query:  392 NVVPRLVVFDLDKTCWLPEMFQLKGAPFRVAAGRVLDREGTEVALRPDVRNVLEELYTHPGLSSTRIACASRTNRGNWSRQVMELFVVFDGLLMSELFDFVEIQPGDKTAHFDELTTLSKVPYDEMLFFDDWERNIKDVSPLGVTCIHCPEGLTKQLWRQGLQKY 886
              VP+LVVFDLD T W PEM+QL GAPF    G+V DR GTEV L  DVR++L  + T    SST+IA ASRT    W+ +VM L  V D L M+++F+F EI PG KTAHF  L   S++ + +M+FFDDW  N +DV+ LGVT + CP+G+T +++   LQK+
Sbjct:   63 TAVPKLVVFDLDYTMWNPEMYQLYGAPFEKRGGKVYDRSGTEVKLFRDVRSILRRIRTSEEFSSTKIASASRTEYPEWAYEVMSLMPVDDNLTMADVFEFNEIYPGTKTAHFRRLHQDSQIAFKDMVFFDDWNGNCRDVARLGVTTMECPQGMTMKVFDACLQKF 227
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BLAST of jgi.p|Trimin1|76912 vs. uniprot
Match: D7G270_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G270_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 1.980e-42
Identity = 80/170 (47.06%), Postives = 103/170 (60.59%), Query Frame = 2 
Query:  374 ALAEIPNVVPRLVVFDLDKTCWLPEMFQLKGAPF-RVAAGRVLDREGTEVALRPDVRNVLEELYTHPGLSSTRIACASRTNRGNWSRQVMELFVVFDGLLMSELFDFVEIQPGDKTAHFDELTTLSKVPYDEMLFFDDWERNIKDVSPLGVTCIHCPEGLTKQLWRQGLQ 880
            A  E    VPRLVV DLD T W PE++Q++GAPF +   G+V DR G  + L P VR  L E++       T++A ASRT+   W+RQVM L  +  GLLM  +F F EI  G K  HF E+   SKV Y+EM+FFDDW++N KDV  LGVTC+ C   +    WR+  Q
Sbjct:   88 AAEESDGSVPRLVVMDLDYTLWKPELYQMRGAPFTKKKDGKVRDRSGEVIDLFPGVREALLEVHRGHRFRDTKLAIASRTSHERWARQVMGLIELEPGLLMRSVFSFTEIYSGSKVRHFGEIRRNSKVSYEEMIFFDDWDQNCKDVGKLGVTCVECRR-VVSTFWRRACQ 256
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BLAST of jgi.p|Trimin1|76912 vs. uniprot
Match: A0A7S4CF23_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CF23_9EUGL)

HSP 1 Score: 146 bits (369), Expect = 1.390e-37
Identity = 75/174 (43.10%), Postives = 99/174 (56.90%), Query Frame = 2 
Query:  389 PNVVPRLVVFDLDKTCWLPEMFQL--KGAPF-RVAAGRVLDREGTEVALRPDVRNVLEELYTHPGLSSTRIACASRTNRGNWSRQVMELFVVFDGLLMSELFDFVEIQPGDKTAHFDELTTLSKVPYDEMLFFDDWERNIKDVSPLGVTCIHCPEGLTKQLWRQGLQKYASRKQ 901
            P   PRLV  DLD T W PEMF L   GAPF R   G + D  G E+ L    R ++  L T PG + T +A  S T+   W+ + M  F V DG+ +    D+ EI  G K  HF  +   S + Y++MLFFD+   N  DV  LGVTC+HCP+GLT+ +W QGL+++A R Q
Sbjct:  152 PGHRPRLVALDLDATVWYPEMFMLWGGGAPFVRRDDGALQDTAGRELRLMGSTRAIIRGLKTEPGWAGTALAYCSCTDEPAWAAECMRKFEVGDGMTLDSAADYKEIYKGRKVLHFQNIHAASGIAYEDMLFFDNENHNCVDVRALGVTCVHCPDGLTQGIWEQGLEQHADRAQ 325
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BLAST of jgi.p|Trimin1|76912 vs. uniprot
Match: A0A1W0A7X6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7X6_9STRA)

HSP 1 Score: 139 bits (350), Expect = 2.840e-36
Identity = 72/180 (40.00%), Postives = 106/180 (58.89%), Query Frame = 2 
Query:  398 VPRLVVFDLDKTCWLPEMFQLKGAPFRVAA-GRVLDREGTEVALRPDVRNVLEELYTHPGLSSTRIACASRTNRGNWSRQVMELFVVF------------DGLLMSELFDFVEIQPGDKTAHFDELTTLSKVPYDEMLFFDDWERNIKDVSPLGVTCIHCPEGLTKQLWRQGLQKYASRK 898
            +P+L+VFDLD T W PEM++L GAPFR    G V  R+G EV L  D   VL E+ + P    T++A AS T   +W+R+ M L  V             +  +++   D+  I P +K  HF +L   S VPY++MLFFD+   NI +V  LGV C +CP+GL+ Q+WR+G+ ++ S++
Sbjct:   10 IPKLIVFDLDFTLWYPEMYELVGAPFRRNKHGVVSARDGEEVHLFDDAHAVLTEIASLPEFRETQVAVASSTTYPHWARECMSLIQVRNAEMPKKNKKTKEAKVLNAFIDYQAIYPKNKKVHFKQLHEESGVPYEDMLFFDNEHYNIVNVQQLGVVCAYCPDGLSYQVWREGMDRFQSKE 189
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BLAST of jgi.p|Trimin1|76912 vs. uniprot
Match: C1MN59_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MN59_MICPC)

HSP 1 Score: 139 bits (351), Expect = 1.900e-35
Identity = 74/182 (40.66%), Postives = 106/182 (58.24%), Query Frame = 2 
Query:  398 VPRLVVFDLDKTCWLPEMFQLKGAPFR------VAAGRVLDREGTEVALRPDVRNVLEELYTHPGLSS--TRIACASRTNRGNWSRQVMELFVVFDG------LLMSELF-DFVEIQPGDKTAHFDELTTLSKVPYDEMLFFDDWERNIKDVSPLGVTCIHCPEGLTKQLWRQGLQKYASRK 898
            +P LV FDLD T W PE++ ++GAP+           RV+D  G E+   P     +  L +H   +   T+IA ASRTNRG W+ +VM +FVV DG        M E   D VE+  G K  HF++L   + +PY +MLFFD+ E+N +DV+ LGVTC+ C  G+T++ W  GL+ +A +K
Sbjct:   86 LPALVCFDLDDTIWFPELYMMRGAPWTKERCDTTGRERVMDASGEELRCYPAATAAMAMLRSHAAFAKRGTKIAVASRTNRGAWADEVMGMFVVDDGSGSGTTTTMRECVGDLVEMYSGTKKRHFEKLKARTGIPYADMLFFDNEEQNTRDVATLGVTCVLCVGGMTERAWEDGLRAFAEKK 267
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BLAST of jgi.p|Trimin1|76912 vs. uniprot
Match: K3WDD8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WDD8_GLOUD)

HSP 1 Score: 135 bits (339), Expect = 1.860e-34
Identity = 77/181 (42.54%), Postives = 102/181 (56.35%), Query Frame = 2 
Query:  398 VPRLVVFDLDKTCWLPEMFQLKGAPFRVAA--GRVLDREGTEVALRPDVRNVLEELYTHPG-LSSTRIACASRTNRGNWSRQVMELFVV----FDG------LLMSELFDFVEIQPGDKTAHFDELTTLSKVPYDEMLFFDDWERNIKDVSPLGVTCIHCPEGLTKQLWRQGLQKYASRKQ 901
            VP+LVVFDLD T WLPEM++L GAPF+  A  G V DR G EV   P V  VL  L   P  +  T +A AS+T   +W++  M L  V     DG        +  + D+  I P +K  HF++L   S V Y++MLFFD+   NI DV  LGV C +CP+GL+   W QG++ +   KQ
Sbjct:   30 VPKLVVFDLDFTLWLPEMYELYGAPFKKNATTGVVTDRSGEEVHFFPAVHAVLSILELDPQFMHETEVAAASKTTEPHWAKTCMRLMDVTLTPVDGNGAATKKSLQSIMDYEAIYPRNKRVHFEQLKEQSGVAYEDMLFFDNEYGNIVDVGKLGVVCAYCPQGLSDGSWLQGMEAFQKSKQ 210
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BLAST of jgi.p|Trimin1|76912 vs. uniprot
Match: A0A485KA08_9STRA (Aste57867_2390 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KA08_9STRA)

HSP 1 Score: 134 bits (338), Expect = 2.540e-34
Identity = 73/187 (39.04%), Postives = 106/187 (56.68%), Query Frame = 2 
Query:  398 VPRLVVFDLDKTCWLPEMFQLKGAPFRVAAGRVLDR-EGTEVALRPDVRNVLEELYTHPGLSSTRIACASRTNRGNWSRQVMELFVVFDGLLMSE----------------LFDFVEIQ---PGDKTAHFDELTTLSKVPYDEMLFFDDWERNIKDVSPLGVTCIHCPEGLTKQLWRQGLQKYASRK 898
            +P+L+VFDLD T W PEM++L GAPFR  A  V+   +G EV L  DV  +L E+   P  + T++A ASRT    W+R+ + L +V    +  E                L + V +Q   P +K  HF +L   S V +DEMLFFD+   NI+D+S +GVT ++CP G+T  +WRQG+ ++   K
Sbjct:   26 IPKLIVFDLDFTLWYPEMYELAGAPFRRDADGVVHACDGEEVHLFDDVHPILHEIALSPAFADTQVAVASRTEYPEWARECLGLILVRFHTMSEEEKGQLRRRQLDASAESLANLVHLQAIYPTNKRVHFKQLRDESGVDFDEMLFFDNEYGNIRDISSIGVTSVYCPNGMTLDVWRQGMVEFQKTK 212
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BLAST of jgi.p|Trimin1|76912 vs. uniprot
Match: W4GYJ4_9STRA (Magnesium-dependent phosphatase-1 n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GYJ4_9STRA)

HSP 1 Score: 133 bits (335), Expect = 6.450e-34
Identity = 73/186 (39.25%), Postives = 107/186 (57.53%), Query Frame = 2 
Query:  398 VPRLVVFDLDKTCWLPEMFQLKGAPFRVAA-GRVLDREGTEVALRPDVRNVLEELYTHPGLSSTRIACASRTNRGNWSRQVMELFVV-------------------FDGLLMSELFDFVEIQPGDKTAHFDELTTLSKVPYDEMLFFDDWERNIKDVSPLGVTCIHCPEGLTKQLWRQGLQKYASR 895
            VP+LVVFDLD T W PEM++L GAPFR +A G V  R+G EV L   V  VL E+        T++A ASRT   +W+R+ M L +V                    +G  ++ L ++  I P +K  HF +L   S V Y +MLFFD+   NI+D+S +GV+ ++CP+GLT ++W QG+  + ++
Sbjct:   24 VPKLVVFDLDFTLWYPEMYELAGAPFRRSAKGVVSARDGEEVHLFDAVHPVLHEIAFGVEFVETQVAVASRTTYPDWARECMNLIMVQFKELTEAEKAVQRRKRLNAEGETLANLVEYQAIYPTNKHVHFKQLADDSGVAYSDMLFFDNEYGNIRDISAMGVSSVYCPDGLTWEVWEQGMTAFQTK 209
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|76912 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CCC3_9STRA3.570e-185100.00Acid phosphatase-domain-containing protein n=1 Tax... [more]
A0A6H5JAJ8_9PHAE4.810e-5148.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2V3W0_9STRA8.150e-4950.91Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D7G270_ECTSI1.980e-4247.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4CF23_9EUGL1.390e-3743.10Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A1W0A7X6_9STRA2.840e-3640.00Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
C1MN59_MICPC1.900e-3540.66Predicted protein n=2 Tax=Micromonas pusilla TaxID... [more]
K3WDD8_GLOUD1.860e-3442.54Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A485KA08_9STRA2.540e-3439.04Aste57867_2390 protein n=1 Tax=Aphanomyces stellat... [more]
W4GYJ4_9STRA6.450e-3439.25Magnesium-dependent phosphatase-1 n=3 Tax=Aphanomy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_56contigContig_56:135513..142183 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|76912|CE76911_72
BRITEko00000,ko01000,ko01009
KEGG koko:K17619
EC3.1.3.48
GOsGO:0003674,GO:0003824,GO:0003993,GO:0004721,GO:0004725,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0030946,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0071704,GO:0140096,GO:1901564
Descriptionfructosamine metabolic process
COG categoryO
Max annot lvl2759|Eukaryota
EggNOG OGsKOG4549@1|root,KOG4549@2759|Eukaryota
Evalue1.18e-43
Seed ortholog2880.D7G270
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-16_002270.1
TranscriptId77234
TrackFilteredModels1
ProteinId76912
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|76912gene_14083Tribonema minus UTEX_B_3156 geneContig_56 135513..142183 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|76912Trimin1|76912|CE76911_72Tribonema minus UTEX_B_3156 polypeptideContig_56 135523..142044 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_14083_1exon_14083_1Tribonema minus UTEX_B_3156 exonContig_56 135513..135879 +
exon_14083_2exon_14083_2Tribonema minus UTEX_B_3156 exonContig_56 137310..137380 +
exon_14083_3exon_14083_3Tribonema minus UTEX_B_3156 exonContig_56 138629..138811 +
exon_14083_4exon_14083_4Tribonema minus UTEX_B_3156 exonContig_56 140363..140507 +
exon_14083_5exon_14083_5Tribonema minus UTEX_B_3156 exonContig_56 141266..141358 +
exon_14083_6exon_14083_6Tribonema minus UTEX_B_3156 exonContig_56 142000..142183 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_14083UTR5_14083Tribonema minus UTEX_B_3156 five_prime_UTRContig_56 135513..135522 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_14083CDS_14083Tribonema minus UTEX_B_3156 CDSContig_56 135523..135879 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_14083UTR3_14083Tribonema minus UTEX_B_3156 three_prime_UTRContig_56 142045..142183 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_14083 ID=mRNA_14083|Name=jgi.p|Trimin1|76912|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1043bp|location=Sequence derived from alignment at Contig_56:135513..142183+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GAAAGAACTCATGCGCTGTCTGGCGTGGGTGCTGCCTGCAGCTGCGATCG
CGCTGGCGCTGCGTGCCAGCGATGCCTTCATAGCACCACCTCCGCAGCAG
CGCTACCTGCACAGCACGACTGACGTCCAAAGATGCAGCATGATGGCTAA
AGCGAAGAAGGGGCCTGCAAAAGCCCGACCCAAGGGCACTCCCGTGAACA
TTGATGTAGTGACTCCATTTAAGCTCACTCAGCCTTCTGTGATACCGGAG
CAGCCTCGTGTGTCGGCCGAGGAGAAGAAGCTGCCTCAGGCTGGCAAGCA
GGAAGTTGCGGCTGGGAGCAAGGAGGGCGCTGCGGCGGGTGCTGAGGTTG
CTGCACCCCCATTTCAGATCGGCGCACTGGCGGAGATCCCAAACGTGGTG
CCGCGGCTGGTGGTGTTCGACTTGGACAAGACATGCTGGTTGCCAGAAAT
GTTTCAGCTGAAGGGAGCGCCGTTCCGCGTCGCCGCTGGGCGCGTTCTGG
ACCGCGAGGGAACAGAGGTGGCGCTGCGCCCCGACGTGAGGAACGTTCTC
GAGGAGCTCTACACGCACCCGGGGCTGTCGTCAACGCGCATCGCGTGCGC
GAGCCGGACGAACCGCGGCAACTGGTCACGGCAGGTGATGGAGCTCTTTG
TCGTATTCGATGGGCTGCTCATGTCGGAGCTCTTCGACTTCGTCGAGATA
CAGCCGGGGGACAAGACGGCGCATTTTGATGAGCTCACCACGCTGTCCAA
GGTCCCTTACGACGAGATGCTGTTCTTCGATGACTGGGAGCGCAACATCA
AGGACGTATCACCGCTCGGCGTGACCTGCATTCACTGCCCGGAGGGCCTC
ACAAAGCAGCTGTGGCGGCAAGGCCTGCAGAAATACGCATCGCGCAAGCA
GTGATAGTGACTGGCGGCGGCATCTGTGACAGCGCTCCGAAAGCCAGCTT
GCAGCAGTGCTCAACTCAAACCAAGTATAGCCTGCGCCGTGCGACATGGA
ACATTCCCCGGAGGCGCTAACCCTAGCGAGAGGGCTTGAACTC
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protein sequence of jgi.p|Trimin1|76912

>Trimin1|76912|CE76911_72 ID=Trimin1|76912|CE76911_72|Name=jgi.p|Trimin1|76912|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=298bp
MRCLAWVLPAAAIALALRASDAFIAPPPQQRYLHSTTDVQRCSMMAKAKK
GPAKARPKGTPVNIDVVTPFKLTQPSVIPEQPRVSAEEKKLPQAGKQEVA
AGSKEGAAAGAEVAAPPFQIGALAEIPNVVPRLVVFDLDKTCWLPEMFQL
KGAPFRVAAGRVLDREGTEVALRPDVRNVLEELYTHPGLSSTRIACASRT
NRGNWSRQVMELFVVFDGLLMSELFDFVEIQPGDKTAHFDELTTLSKVPY
DEMLFFDDWERNIKDVSPLGVTCIHCPEGLTKQLWRQGLQKYASRKQ*
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mRNA from alignment at Contig_56:135513..142183+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_14083 ID=mRNA_14083|Name=jgi.p|Trimin1|76912|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6671bp|location=Sequence derived from alignment at Contig_56:135513..142183+ (Tribonema minus UTEX_B_3156 )
GAAAGAACTCATGCGCTGTCTGGCGTGGGTGCTGCCTGCAGCTGCGATCG
CGCTGGCGCTGCGTGCCAGCGATGCCTTCATAGCACCACCTCCGCAGCAG
CGCTACCTGCACAGCACGACTGACGTCCAAAGATGCAGCATGATGGCTAA
AGCGAAGAAGGGGCCTGCAAAAGCCCGACCCAAGGGCACTCCCGTGAACA
TTGATGTAGTGACTCCATTTAAGCTCACTCAGCCTTCTGTGATACCGGAG
CAGCCTCGTGTGTCGGCCGAGGAGAAGAAGCTGCCTCAGGCTGGCAAGCA
GGAAGTTGCGGCTGGGAGCAAGGAGGGCGCTGCGGCGGGTGCTGAGGTTG
CTGCACCCCCATTTCAGGTGATTTTTCTCACAAATTCATGCAATACTAAG
TCACGACAGCGCTTGTGCGGCTCTGCTGATTTGTTCAATTCAATAAGCAA
ACTTCAACATGGACGCAGTATTGAGTGTGTGTGTGTGTGTGTGTTTTTTG
GCAGGCCTTCAATGCCATTAATTTGGTTGCGCATAACATCCCTCAACAGT
GGTTTGTGCGCTTAGCGACATCCACATGTACAATGATGTGTTCGCATAAG
AGTGAACATCCTCAGATTACTTCCAAGTTAGCCAGCTTGGCTTTGCACAT
ACCACCTCATTAGCCGTGCAGTCGCATACTCCTGTCTGCACAGGAGCACC
AAGAACTCATGCCATATGGGTCCGATTTATCAGACAGCTCCGTTGTCTTA
AACAACGACAAATCAGTCACACGCCGTGGTCTCTGTCTGTTCGGCGCGCC
GGTTGCCCTAACCCTAACCCTAACTCTTATTTTCTGTGAAGCTCGGCAGC
GGCAAGTGCTGTTGGTGTGAAGAGCTCATGCGTGTGCCACGCACACCTGA
CAGCAGAAAGGTACTGGCAGGCATTGCAACATCAAGACTCATACATAGCA
GCACTCCACGGCTGTGCTCAGGGCATGTACGCAAGGGCGCCGCCAGCGCA
TGCTATGTGTGTCGTTGTCCTGTACGTCTGAGCAACACGTACGCATAGCC
TAACGGCAGTATTTGCGCCTGGGAATTGCACTGCTGGGTACACCCACCCA
ACCCTGACGCTAAGACGCTGTGGCGGCAGCAGTTGCAGTGCAGTTGCAGT
CTACTGGTATCTTCAAGTTGAATCTAACACAACGTCCCACCAATATGCAG
TTGCTGGAGCGCCTCCTCCGCTGCATATACGGTACATACCTATATGTACA
AGCATACCATGCATACCGGTACCTACCTACCCAAGCCTACACTTCGTCTT
TCTCAGCACAGGCGAGAGCCGCGAGGTGGGTGCCCGCTGTTGATCTAACC
CTACCCAACCCCACCCCAACCCCCTAACTCTAAACTAACCCTAACCCTTT
TCGCACCGAGCCTTGCTGCCGTTTCACAATCGCTGATGTGTCCACGCGCC
TCACCCTAAGGTTCCCCCCCGCCCCCCCCCTCTAAGCCTAACCCAAAAGA
TAACTCCGAACCTAATCCTAAGGTTTCGCACCAAGCCTTGCTGCCGCCAC
ACAACCGTTGATGTGTCCACGCGCCTTACCCTAAGGCTTCCCCCGCCCCC
CCCCCTTAACCCTAACCCTGAAAGCCAACCCCAAACCTAAACCTAAGGTC
TCGCCCTGAAGGTTAGGGTTACATAAGGTTTACGAGTCAGCAAGTGTACA
CACGCCACAGATGACTGCGAGGGGACTTGCTGCAGAGACTCACAGAGACT
CAGACTTGGAGTTTCATTGGACATGCTGATGTGACTGCACTTCACAGATC
GGCGCACTGGCGGAGATCCCAAACGTGGTGCCGCGGCTGGTGGTGTTCGA
CTTGGACAAGACATGCTGGTGAGTCGAGTCAAGACGACTCCTTGACTCAC
TCAGTGGCTCTGACTCAAATCATGAGTGGAAGTACCGCGGCTCGTGGTCG
TTGGCCTGAAAGAGACGTGCTGGTGAGTCGAAATGAGTTGAGTCGACTCA
TTGACTCACCCTCAGCGGCCGTGACTTGTGGCGACTGTGACAAGTGCGGG
CTACTGGTGCTCGATGGGCAAGCCATGACCTTGCCCGACCTGAATCGTTC
ATTCATTTAGTGGCCATGACTGAATTGCGTAGCCAGTGTTCGACCTCGCC
AACTCATGCTGATGAAGCGAGTCAAGTCGACTTGTCTGGTTGAGTCTTTT
GCTGTTCCGCGTGGCTGCTGGTGTTGTGGTGTTTGACCCAGGCACAATGC
GCTGCTGACTTGACCTGATTCTGACTTGTTCACTCAACTCAGTGACCATG
ACTCATTTGCGTGGCCGGTGAAGTCTGACCCGGACAAGATGTGCTGCCGC
GGGGTGACTCGCTTACTTGACTCGATAACCATGACCTTACTGGTCATTTG
ACTCAGTGAGCGTGACTCACGCGCATGCTCATCGCAACAAAACTCACCTC
TAGACTCGTGGTTTGTGTTGACAACTGAGCCAACGAGTGCAGCGCTCCTA
ACCCTAAACCTTAACGTTAGCACTAAGCTCTCGTTTGCAATACGTACGTT
CATGCACATTCTGCCAAGCTCGACGCCATTCACCATGGCCCTTTTCCCTG
CACTGTCGCCCACCACTTGACTCTACTCGACTTAAACTCGACTTGACGAG
TCATGCCGCTGAGTCGCAATGGACACATACATACCCCGCTTTGTGAAGGG
ACAGCTGCCTTTTTGTGCTCACCCTGTGTTGGGGCTAGGTCAGGGTCAGG
GGTTGTATCAGGGTCAGGGTTCCTGAGTAACGCTGCGCGCGATGCTGATG
GTGATGCTCACGCGCTGCGATGCGCGCAGGCTGCTAGAGATGTTCCATTC
GAAGGGAGAAACACCGCTTCAGACTGCGTCTATACGGCAGAAATGCGGGC
CTTTGGAGTGCGTCAACGATGACCTTAACCCTAACCCTAAACCCTAACCC
TAACCACATGCTGTCACGCATGCAAACGCGAAGGCTGCCGGAGATGTTCC
AGTTAAAAGGTCGACTTGGGTCGACTTTAGGTCACCCTTGACGAAAGCCT
GTACCGGGAGGCTGACCATATTGCTCAAACGCTCTCACGGTTGCAACGCA
TTTTTTCAACGCGCAGGTTGCCAGAAATGTTTCAGCTGAAGGGAGCGCCG
TTCCGCGTCGCCGCTGGGCGCGTTCTGGACCGCGAGGGAACAGAGGTGGC
GCTGCGCCCCGACGTGAGGAACGTTCTCGAGGAGCTCTACACGCACCCGG
GGCTGTCGTCAACGCGCATCGCGTGCGCGAGCCGGACGAACCGCGGCAAG
TGAGTGAGTAGGAGAGTGAGTGAGTCAGCGAGTAAGTACCGGGGGCAGCG
AGTGATTACCTGGGGGGCTGTCGTCGATGCGCATCGCGTGCGCGAGCCGG
ACGAACCGCGGCAAGTGAGTGAGTAGGTGAGTGAGTGGGTCAGTGAGTCA
GTGGGTGCGTCGACTCGCACCGTGTGCGCGAGCCGGACAAACCGCGGCAA
GTGAGTGAGTTAGCGATGAAGTGAGTCAGCATGTGAGTACCAGGGGCTGA
CGTCGACGCGCAGTCACGTGACGTGAGCGGGACGAACCGCGGCAAGTGAG
TGACTAGGCGAGTGAGTGAGTCAGTGAGTGAGTGCTACCCGGGATTAGGG
CGTTGACGCGCATCGCGTGCGCGAGCCGGACGAATCGCGGCAAGTGAGTG
AGTAAGTAGTGAGTGATCACCCGGAGCTGTCGTCGACGCTAGGCGGGCCG
CAGAGTCTCGAAGGGGAGAGCGGCTGAACATGTGTGGACTGCGCAGCAAA
AAAAAAAAGAGGTCTCAGAGAGGGAAATCAACGCAAAGTTCAACGCGAAG
TGGCTCAGCCAGCAGCGCTGAAGGGGCCCCCCACTTTGCGGCAGTGCCAG
ACCAAGCGGAAGCACCTCCGCACCGCTGGCGGCGTCCCGCAGCGGCGCCC
TGAGGGCCAAATTCGAGTCAGACTCTCAAGTCCAACTCGAGTTTGCCTCA
GGGCGCCGGGCCTTGCCTGCGGGACGTCGCCAGCGGAGGTGCTTGCGCTT
GCCTTGGCGCACTACTGCAAGGGGAGGCCTTACAGCTCCGGCTGTCATGG
ACTGCAGCAGTAGACTGGGTGGCCATTGGCAGAGGGAGCGCCAGTACAAC
TCCCTTCACCACTTGTGACATTACATGTTTATTTCTGCTACCATGTATAG
ATGGCACTACATGTTTTGTGCGCCCGTACACTCCACACAATCCTTCTGTT
TCTGCAGCAGACATGATGGCGACTGTCTCGCTTTCCTCGCGCCTTCAGCG
CGATCACGTGAACAGTAAACTTCCCTTCACGCACGTGACGACCTCTGACC
TTCTCATCCATTAACAATAGTAAGTAATTCATGCTTCAACAGTCAATATA
AACTACTTTTACCAGATGTGTCTTGTGCCCCTCGTGGCAGCTGTGCGGCG
GGTCATGAAGCTCTTCGTTGGTTCCCTTCACGCTTTCTGACGCAAGTATG
TACTTCGACGTATGTGATTATGATAACTTTCTATTACTTCAAGTATACTA
CCAAGTGTGTCGTGCGCCCCCTCATTGCAGCTGGTCACGGCAGGTGATGG
AGCTCTTTGTCGTTTCTCTTCGCAACTTCTGACATCAGTACATACTTTCT
ATGTTTTACATTGCTGTTTATTATAGCAGCGGCGACCACGGTTATTGGTG
GAAGGCACTTGCGGCTAACCATTCCTTGTCACCTAGAGCTCTACGATCTT
TTGATTCGTTTCCATACGCATATACTTTCTATGGTTTTTATTGCTGTTGA
TCATATAAATTTACTATAATTCTAAATGTGTCATGCACCCCTCATTGCAG
CTGGTCACGGCAGGTGATGGAGCTCTTTGTCGTATTCGATGGGCTGCTCA
TGTCGGAGCTCTTCGACTTCGTCGAGATACAGCCGGGGGACAAGACGGCG
CATTTTGATGAGCTCACCACGCTGTCCAAGGTCCCTTACGACGAGGTGGG
TTGCCAGTTGAAGTATCACAATTGAAGTTCAAGATGGAGTGTATACATTG
TAAACCAGATGGCGCACCTCGATGAGCTCACCACGCTGTCCAAGGTCCGT
CATGACGGTCTTCAGTTGAAGTATCGCCACCGAAGTCCATGTTGAAGTGT
ATAGGAAGTAGACACTACGGCGCACTTTGATGAGCTCACCACCCTGACAA
GAACGCAACCCATTTCTGGAGGGGCTGAGGGCAATTGAGTAGGGACTGGG
CGATGTAGACGGCACCAGATGTTGGGCGCAAATACTGTGCACCGTTTTGT
TCGGCCTTGTGCTGAAGCTTGCAACTGTAGCACTTGAAATTCGCGAGGAC
TTCAAGGTGTAGTGAGTCATGACCGCGAGGCCTTGGGTACATCAATGATC
AGACACGCCATTCCATTGCGGTCTGCAGCACCATCGCAGGTGCCGTTCTT
TGGTGGAAGGGCAGGGTTAGATTATCTGCAGACAATGGTATGCCCACATG
CATCTGTGCCCATCACTTTCGACTGTCCCCTTGCTGCCCGCTGTGCCATC
GCAGACTTGAGACTCGACTCATTTGTCCATCACGACGAATGACTCAACAT
TGCCCTGTTGCTGTGCCATCGCAGATGCTGTTCTTCGATGACTGGGAGCG
CAACATGAGACATTGACAGTCTTTGAGATTCGACTTGCGACGCAACTCGC
CTGTTGTCGCTAATGAGTGACTCAACATTGCCTTGCTGCTGTGCCATTTG
CAGATGCTGTTCTTCGATGACTGGGAGCGCAACATCAAGGACGTATCACC
GCTCGGCGTGACCTGCATTCACTGCCCGGAGGGCCTCACAAAGCAGGTGG
GCATCACCACCATGCACTCTATGTACTTCTACTGATTTCACTTGCCAGTG
GGGCGCAAAGAGCCCACTCATCTTGTAATGCACTCCATGCATTCAGCACT
CCTTCTCCGCAGAGAGACGCAAACGCAAACGGGCTGCCCCCTCTTAACAC
TACCACCACCGCCCCACAACCAAACCCTACTTAGGGTTGCCCAGCCGTGA
GGCACACTTGTCCTGTCTTGGAAGACATTCATGCAGGCCTGGATCGCCTT
TGACTCCATGTACTTGGTTCAATTTCCGCGTAGGGCTCGAAAAAGCCCAG
ATGGTGGATCCAGCTTGTTGCTTACAAGCATCAACATGTACCATGTGGAA
ATTTGAAAGCGTATCAATGCACACTGGCGATCACTTCTAAACGACATCGC
CAAATGGCATCTCCCCCCCTTGAGAGTTCTCGTCCCTCTGCTCCGGGGCC
CCCCTAGACCCTGCCATGTGCTTCACACACATACAGCATGTACTTGAATA
CTTCACAACATACAGCATGTACTTCAATACATTGATGTACTTGAACTGGA
ATCCTCTTTTGTTGCTGCGCTGAACTGACGGTCATCATCAGCGCTCATGA
AGTTGCACCCTATGTGTGTATTCTTTCGCCTGCGCAGCTGTGGCGGCAAG
GCCTGCAGAAATACGCATCGCGCAAGCAGTGATAGTGACTGGCGGCGGCA
TCTGTGACAGCGCTCCGAAAGCCAGCTTGCAGCAGTGCTCAACTCAAACC
AAGTATAGCCTGCGCCGTGCGACATGGAACATTCCCCGGAGGCGCTAACC
CTAGCGAGAGGGCTTGAACTC
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Coding sequence (CDS) from alignment at Contig_56:135513..142183+

>mRNA_14083 ID=mRNA_14083|Name=jgi.p|Trimin1|76912|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=894bp|location=Sequence derived from alignment at Contig_56:135513..142183+ (Tribonema minus UTEX_B_3156 )
ATGCGCTGTCTGGCGTGGGTGCTGCCTGCAGCTGCGATCGCGCTGGCGCT
GCGTGCCAGCGATGCCTTCATAGCACCACCTCCGCAGCAGCGCTACCTGC
ACAGCACGACTGACGTCCAAAGATGCAGCATGATGGCTAAAGCGAAGAAG
GGGCCTGCAAAAGCCCGACCCAAGGGCACTCCCGTGAACATTGATGTAGT
GACTCCATTTAAGCTCACTCAGCCTTCTGTGATACCGGAGCAGCCTCGTG
TGTCGGCCGAGGAGAAGAAGCTGCCTCAGGCTGGCAAGCAGGAAGTTGCG
GCTGGGAGCAAGGAGGGCGCTGCGGCGGGTGCTGAGGTTGCTGCACCCCC
ATTTCAGATCGGCGCACTGGCGGAGATCCCAAACGTGGTGCCGCGGCTGG
TGGTGTTCGACTTGGACAAGACATGCTGGTTGCCAGAAATGTTTCAGCTG
AAGGGAGCGCCGTTCCGCGTCGCCGCTGGGCGCGTTCTGGACCGCGAGGG
AACAGAGGTGGCGCTGCGCCCCGACGTGAGGAACGTTCTCGAGGAGCTCT
ACACGCACCCGGGGCTGTCGTCAACGCGCATCGCGTGCGCGAGCCGGACG
AACCGCGGCAACTGGTCACGGCAGGTGATGGAGCTCTTTGTCGTATTCGA
TGGGCTGCTCATGTCGGAGCTCTTCGACTTCGTCGAGATACAGCCGGGGG
ACAAGACGGCGCATTTTGATGAGCTCACCACGCTGTCCAAGGTCCCTTAC
GACGAGATGCTGTTCTTCGATGACTGGGAGCGCAACATCAAGGACGTATC
ACCGCTCGGCGTGACCTGCATTCACTGCCCGGAGGGCCTCACAAAGCAGC
TGTGGCGGCAAGGCCTGCAGAAATACGCATCGCGCAAGCAGTGA
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