mRNA_14006 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|176502 vs. uniprot
Match: A0A835ZEH1_9STRA (Inosine/uridine-preferring nucleoside hydrolase domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEH1_9STRA) HSP 1 Score: 628 bits (1619), Expect = 2.160e-227 Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 1 Query: 1 DDALCLLACINSPAVELVGVSVTFGNANLTEMVDIARDLLDNFHPAGDLEVHVGAAGPGHHNVTTDAVAAMLNTATLDNGSSALTIVCAGPATNVASLLTLHPGVSTSIQEVVVVAGRRPGQRFTTGAATEHGHPDLNFENDPAAFAVLLASRMPLTYAPFEVSSQVRVTETDLAAALGSGGAVGAYVARVGAPWLRLWRDLFDVRYFHPFDSLAALRVTHPELLACDELESWVALGPDDAAHPGVQGRSGKELGGDETLKPYLLVGDGAPPGHDGPSRRVLYCHTPLEGAVQAIWESILPPVRGGGGAAAEL 939 DDALCLLACINSPAVELVGVSVTFGNANLTEMVDIARDLLDNFHPAGDLEVHVGAAGPGHHNVTTDAVAAMLNTATLDNGSSALTIVCAGPATNVASLLTLHPGVSTSIQEVVVVAGRRPGQRFTTGAATEHGHPDLNFENDPAAFAVLLASRMPLTYAPFEVSSQVRVTETDLAAALGSGGAVGAYVARVGAPWLRLWRDLFDVRYFHPFDSLAALRVTHPELLACDELESWVALGPDDAAHPGVQGRSGKELGGDETLKPYLLVGDGAPPGHDGPSRRVLYCHTPLEGAVQAIWESILPPVRGGGGAAAEL Sbjct: 1 DDALCLLACINSPAVELVGVSVTFGNANLTEMVDIARDLLDNFHPAGDLEVHVGAAGPGHHNVTTDAVAAMLNTATLDNGSSALTIVCAGPATNVASLLTLHPGVSTSIQEVVVVAGRRPGQRFTTGAATEHGHPDLNFENDPAAFAVLLASRMPLTYAPFEVSSQVRVTETDLAAALGSGGAVGAYVARVGAPWLRLWRDLFDVRYFHPFDSLAALRVTHPELLACDELESWVALGPDDAAHPGVQGRSGKELGGDETLKPYLLVGDGAPPGHDGPSRRVLYCHTPLEGAVQAIWESILPPVRGGGGAAAEL 313
BLAST of jgi.p|Trimin1|176502 vs. uniprot
Match: A0A6A7L655_9BACT (Nucleoside hydrolase n=1 Tax=Luteitalea sp. TaxID=2004800 RepID=A0A6A7L655_9BACT) HSP 1 Score: 205 bits (522), Expect = 2.430e-60 Identity = 121/287 (42.16%), Postives = 162/287 (56.45%), Query Frame = 1 Query: 1 DDALCLLACINSPAVELVGVSVTFGNANLTEMVDIARDLLDNFHPAGDLEVHVGAAGP---GHHNVTTDAVAAMLNTATLDNGSSALTIVCAGPATNVASLLTLHPGVSTSIQEVVVVAGRRPGQRFTTGAATEHGHPDLNFENDPAAFAVLLASRMPLTYAPFEVSSQVRVTETDLAAALGSGGAVGAYVARVGAPWLRLWRDLFDVRYFHPFDSLAALRVTHPELLACDELESWVALGPDDAAHPGVQGRSGKELGGDETLKPYLLVGDGAPPGHDGPSRRVLYC 852 DD L L+ +SP + + GVSV FGNA L + I + +++ F P G L+V+ G GP G ++A+AA L LTI+ GP TN+A++L P ++ I+ VV VAGRRPGQRFTTG + GH D NFE DP AF VLL +PL APFE+SS+V +T+TD+ L G ++A W + WRD+FDV F+PFD+LA +THP+LL C+ L + GPDD P VQG + +E KPYL+V RR YC Sbjct: 63 DDGLALIQAFHSPELVIRGVSVVFGNAPLADAFPIGQRVVERFGPRG-LQVYRGGRGPEDLGRTTPASEALAAALR-------REPLTILAIGPLTNMATILMDEPALAERIRAVVAVAGRRPGQRFTTGTSNPRGHRDFNFEQDPDAFRVLLDRDIPLVLAPFELSSKVWLTDTDVQR-LAEGSQAARWLAAPARAWSQTWRDVFDVDGFNPFDTLAVGYLTHPDLLTCETLPIAIETGPDDVTEPRVQGTTARE-------KPYLIVSASL----SAAGRRATYC 329
BLAST of jgi.p|Trimin1|176502 vs. uniprot
Match: A0A5S9IQ58_9BACT (Ribosylpyrimidine nucleosidase n=1 Tax=Candidatus Uabimicrobium amorphum TaxID=2596890 RepID=A0A5S9IQ58_9BACT) HSP 1 Score: 167 bits (422), Expect = 9.200e-46 Identity = 102/266 (38.35%), Postives = 144/266 (54.14%), Query Frame = 1 Query: 1 DDALCLLACINSPAVELVGVSVTFGNANLTEMVDIARDLLDNFHPAGDLEVHVGAAGPGHHNVTTDAVAAMLNTATLDNGSSALTIVCAGPATNVASLLTLHPGVSTSIQEVVVVAGRRPGQRFTTGAATEHGHPDLNFENDPAAFAVLLASRMPLTYAPFEVSSQVRVTETDLAAALGSGGAVGAYVARVGAPWLRLWRDLFDVRYFHPFDSLAALRVTHPELLACDELESWVALGPDDAAHPGVQGRSGKELGGDETLKPYLLV 798 DDAL LL SP + +VG+SV FGNA+L E IA+ L+ F D ++ V V ++ A+ A L LTI+ GP TN+A+++ HP ++ ++E++ VAGRRP QRF TG H D NFE DP AF LL + +PL APFE+SS+V + ++DL S A ++ WL LW +F V F+PFD+LA +T P+++ ++L + PDD +QG KE KPYLLV Sbjct: 39 DDALALLQAFRSPELNIVGISVVFGNASLKEGYPIAKLLVAKF---SDKKIPVYKGAKEGDEVGSETAASENLYAALQKRP--LTILALGPVTNIATVVKNHPKIAGQVKEIIAVAGRRPQQRFQTGTKNTKAHRDFNFEKDPQAFRELLKTEIPLVLAPFEISSKVWMKKSDLDYLEKSKDAACTWLVPHARNWLNLWEVVFYVDGFNPFDTLAVAYLTSPKMITSEKLPVAIQTLPDDVTEERMQGTKEKE-------KPYLLV 292
BLAST of jgi.p|Trimin1|176502 vs. uniprot
Match: A0A359LR79_9BACT (IU_nuc_hydro domain-containing protein n=1 Tax=Bryobacterales bacterium TaxID=2026791 RepID=A0A359LR79_9BACT) HSP 1 Score: 157 bits (396), Expect = 5.790e-42 Identity = 113/285 (39.65%), Postives = 142/285 (49.82%), Query Frame = 1 Query: 1 DDALCLLACINSPAVELVGVSVTFGNANLTEMVDIARDLLDNFHPAGDLEVHVGAAGPGHHNVTTDAVAAMLNTATLDNGSSALTIVCAGPATNVASLLTLHPGVSTSIQEVVVVAGRRPGQRFTTGAATEHGHPDLNFENDPAAFAVLLASRMPLTYAPFEVSSQVRVTETDL-AAALGSGGAVGAYVARVGAPWLRLWRDLFDVRYFHPFDSLAALRVTHPELLACDELESWVALGPDDAAHPGVQGRSGKELGGDETLKPYLLVGDGAPPGHDGPSRRVLYC 852 DD L LL SP +E+ GVS+ FGNA L I R+++ F P G + VH GAAG T A A+ A L G LT++ GP TNVA+++ HP + I+ VV VAGRRPGQ F G + DLNFE DP AF VLLA+R+PL AP+E+SS V +T +L AA + G A V W+ LW F F+PFD+LA + P L C + + V DD G KPYLLVG G V YC Sbjct: 47 DDGLALLQAFASPELEIRGVSIVFGNAELATASRIGREIVGRFGPKG-MAVHDGAAGESDLGKETAASRALA--AELRRGP--LTVLVLGPGTNVATVVRQHPELVGRIERVVAVAGRRPGQSFRAGPRQKTPFRDLNFELDPEAFRVLLAARVPLVLAPWEISSGVWLTRGELETAAKRNVGMEWMLPALVD--WIELWEREFGAEGFNPFDALAVGYLVKPGSLECSRMRARVEKAADDT--------------GASDRKPYLLVGAAR-----GGGEEVTYC 305
BLAST of jgi.p|Trimin1|176502 vs. uniprot
Match: A0A523DYN8_9BACT (IU_nuc_hydro domain-containing protein n=2 Tax=Bacteria TaxID=2 RepID=A0A523DYN8_9BACT) HSP 1 Score: 147 bits (371), Expect = 2.570e-38 Identity = 106/309 (34.30%), Postives = 151/309 (48.87%), Query Frame = 1 Query: 1 DDALCLLACINSPAVELVGVSVTFGNANLTEMVDIARDLLDNFHPAGDLEVHVGAAGPGHHNVTTDAVAAMLNTATLDNGSSALTIVCAGPATNVASLLTLHPGVSTSIQEVVVVAGRRPGQRFTTGAATEHGHP--DLNFENDPAAFAVLLASRMPLTYAPFEVSSQVRVTETDLAAALGSGGAVGAYVARVGAPWLRLWRDL-------FDVRYFHPFDSLAALRVTHPELLACDELESWVALGPDDAAHPGVQGRSGKELGGDETLKPYLLVGDGAPPGHDGPSRRVLYCHTPLEGAVQAIWESIL 900 DD L LL +SP +E+ GVSV FGN+ L + A++++ F P G LEV+ GAA + DA A+ + LT++ GP TNVA++L HP +++ I+E++ VAGRRPGQ F G E P D+NFE D F +LL S P+ APFE+S++ +++ D+ A V + +L RD F VR +PFD+LA +T P+ + CD L + PDD P KPYL+V RRV YCHT + V + +L Sbjct: 46 DDGLALLQSFHSPELEVRGVSVVFGNSALEQGYPNAQEIVKRFGPKG-LEVYKGAASRAELGIENDATRALAAALRREK----LTVLALGPVTNVATVLKNHPELASQIEEIIAVAGRRPGQTFVIG---EGRRPLMDMNFEYDSEGFQILLDSGAPIVLAPFEISAKTPISQRDIERF--------ARVPELADFFLEPLRDYVNWYDTHFQVRAIYPFDTLAVAYLTSPQWIHCDALPVQIQTHPDDI-EPSEN-------------KPYLIVSSELET-----ERRVTYCHTASDAFVPDLMRRLL 319
BLAST of jgi.p|Trimin1|176502 vs. uniprot
Match: A0A7V9CKX7_9BACT (Nucleoside hydrolase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7V9CKX7_9BACT) HSP 1 Score: 146 bits (368), Expect = 9.750e-38 Identity = 95/283 (33.57%), Postives = 135/283 (47.70%), Query Frame = 1 Query: 4 DALCLLACINSPAVELVGVSVTFGNANLTEMVDIARDLLDNFHPAGDLEVHVGAAGPGHHNVTTDAVAAMLNTATLDNGSSALTIVCAGPATNVASLLTLHPGVSTSIQEVVVVAGRRPGQRFTTGAATEHGHPDLNFENDPAAFAVLLASRMPLTYAPFEVSSQVRVTETDLAAALGSGGAVGAYVARVGAPWLRLWRDLFDVRYFHPFDSLAALRVTHPELLACDELESWVALGPDDAAHPGVQGRSGKELGGDETLKPYLLVGDGAPPGHDGPSRRVLYC 852 D + L+ + + + GVSVTFGN L +A D+++ G L G +GP T+A + + LTIV GP T VA+LL HP + + +Q VV+VAGRRPGQR TG GH D + E DP +F +LL S +P+T E + QV +T DLA + +G + WL +W+D+F V F PF A V HP C+ + + DD + P ++G + KPYL+V D P R V +C Sbjct: 53 DTMALVQAFGADRLRVAGVSVTFGNVPLVRGFPVAGDVMERLGTGG-LRPWRGPSGPDERFSPTEATELLAERLETEP----LTIVALGPLTTVAALLGRHPHLRSQLQRVVLVAGRRPGQRLLTGTTNPRGHRDPSVELDPDSFQLLLDSSVPVTVIALEAAMQVSLTSADLARFV-TGPRPARTIVPPARSWLGVWKDIFGVDGFVPFGLAAVDLVAHPSQARCEAASAQIEWADDDQSEPRLRGPA-------PATKPYLIVRT------DAPGRTVTWC 316
BLAST of jgi.p|Trimin1|176502 vs. uniprot
Match: A0A7Y4UIJ2_9BACT (IU_nuc_hydro domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7Y4UIJ2_9BACT) HSP 1 Score: 143 bits (360), Expect = 1.080e-36 Identity = 99/288 (34.38%), Postives = 139/288 (48.26%), Query Frame = 1 Query: 1 DDALCLLACINSPAVELVGVSVTFGNANLTEMVDIARDLLDNFHPAGDLEVHVGAAGPGHHNVTTDAVAAMLNTATLDNGSSALTIVCAGPATNVASLLTLHPGVSTSIQEVVVVAGRRPGQRFTTGAATEHGHPDLNFENDPAAFAVLLASRMPLTYAPFEVSSQVRVTETDLAAALGSGGAVGAYVARVGAPWLRLWRDLFDVRYFHPFDSLAALRVTHPELLACDELESWVALGPDDAAHPGVQGRSGKELGGDETLKPYLLVGDGAPPGHDGPSRRVLYCHTPL 864 DD L+ +S + + GVSV FGNA ++++ F P G L+++ GA + TDA A+ + I+ GP TNVA+++ HP + I E++ VAGRR GQRF A G D NFE D F VLL S++PLT AP+EVSS V + D+ + +G Y+ WL W+ + F+PFD+LA VTHP+LL + L + PDD P G + K+ KPYL+V R YC+ PL Sbjct: 40 DDGFALIQAFHSRELAIRGVSVVFGNAPFDIAWPNGQEIVRRFGPPG-LKIYAGADSAAKLGLETDASRALAAALKKER----FVILALGPVTNVATVIKNHPELHKQIIEIIAVAGRRAGQRFIARADQPRGFRDFNFELDVPGFQVLLDSKVPLTLAPWEVSSHVWLKAEDIER-MRNGNDATKYMVAPAMDWLARWQKDLGLDGFNPFDTLAIAWVTHPQLLKSEVLPIAIQTLPDDTQEP-KPGEAVKQ-------KPYLIVSK-----QHATKRTARYCYEPL 308
BLAST of jgi.p|Trimin1|176502 vs. uniprot
Match: A0A517YV50_9BACT (Pyrimidine-specific ribonucleoside hydrolase RihB n=1 Tax=Poriferisphaera corsica TaxID=2528020 RepID=A0A517YV50_9BACT) HSP 1 Score: 135 bits (339), Expect = 2.120e-33 Identity = 94/271 (34.69%), Postives = 132/271 (48.71%), Query Frame = 1 Query: 1 DDALCLLACINSPAVELVGVSVTFGNANLTEMVDIARDLLDNFHPA--GDLEVHVGAAGPGHHNVTTDAVAAMLNTATLDNGSSALTIVCAGPATNVASLLTLHPGVSTSIQEVVVVAGRRPGQRFTTGAATEHGHPDLNFENDPAAFAVLLASRMPLTYAPFEVSSQVRVTETDLAAALGSGGAVGAYVARVGAPWLRLWRDLFDV---RYFHPFDSLAALRVTHPELLACDELESWVALGPDDAAHPGVQGRSGKELGGDETLKPYLLV 798 DD L ++A +S V++ GVSV FGN+ + I +++ F P VHVGA T+AV AM+ ++ ++ GP TNVA++L P + IQ++VVVAGRRPGQ+ +G E DLNFEND VLL S + L P+EV+SQV +T DL GG G Y+ W W F + F+PFD+LA V P + +E+ + V G D G+E+ +K YL V Sbjct: 50 DDGLMMIAGFSSERVDVRGVSVVFGNSPVVYGKAIGGNIVRAFGPEYLWSEGVHVGAESDRDLGEETEAVKAMIAGLEGLEADESMVVLATGPVTNVATVLLKRPDLQEKIQKIVVVAGRRPGQKLRSGEMDEIRFTDLNFENDVEGMQVLLRSEVELVLVPWEVASQVWLTRDDLEKLRAEGGGRGIYIYATTQHWFDAWEKEFGAGKEKGFNPFDTLALGYVVDPGMFETEEVVARVERGLSDM--------KGEEM----KMKDYLTV 308
BLAST of jgi.p|Trimin1|176502 vs. uniprot
Match: A0A7W1YST5_9BACT (Nucleoside hydrolase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7W1YST5_9BACT) HSP 1 Score: 129 bits (323), Expect = 6.330e-33 Identity = 71/150 (47.33%), Postives = 83/150 (55.33%), Query Frame = 1 Query: 349 GRRPGQRFTTGAATEHGHPDLNFENDPAAFAVLLASRMPLTYAPFEVSSQVRVTETDLAAALGSGGAVGAYVARVGAPWLRLWRDLFDVRYFHPFDSLAALRVTHPELLACDELESWVALGPDDAAHPGVQGRSGKELGGDETLKPYLLV 798 GRRPGQRFTTG GH D NFE DPAAF V+L S +PL PFE+SS+V + E DL SG A A + WL LWR LF V FHPFD+LA + + C+ L +A PDD PGVQG + KPYLL Sbjct: 1 GRRPGQRFTTGTTNAKGHRDFNFELDPAAFRVILESEVPLVLTPFEISSRVWIDEADLTQLARSGAAARA-LEPPARRWLDLWRRLFSVEGFHPFDTLAIGYIVSSDAYQCERLPVSIATLPDDVTEPGVQGTRVES-------KPYLLA 142
BLAST of jgi.p|Trimin1|176502 vs. uniprot
Match: A0A1B1NVY3_9VIBR (Aldehyde dehydrogenase (NAD(+)) n=4 Tax=Vibrio TaxID=662 RepID=A0A1B1NVY3_9VIBR) HSP 1 Score: 136 bits (343), Expect = 3.040e-32 Identity = 92/274 (33.58%), Postives = 138/274 (50.36%), Query Frame = 1 Query: 1 DDALCLLACINSPAVELVGVSVTFGNANLTEMVDIARDLLDNFHPAGDLEVHVGA-----AGPGHHNVTTDAVAAMLNTATLDNGSSALTIVCAGPATNVASLLTLHPGVSTSIQEVVVVAGRRPGQ-RFTTGAATEHGHPDLNFENDPAAFAVLLASRMPLTYAPFEVSSQVRVTETDLAAALGSGGAVGAYVARVGAPWLRLWRDLFDVRYFHPFDSLAALRVTHPELLACDELESWVALGPDDAAHPGVQGRSGKELGGDETLKPYLLVGD 804 DDA +L+ N+P +++VGVS FGN + +A+ + + F P L V GA N T+A+A L T +LTI GPATN+ASL+ LHP + I++VV+VA R F G+ DLNFE DP A +LL + +PL + PFE++++ +T DL A L + VG Y+ + PWL +W + F + F PFD+LAA + +P ++ + + DD + G + KPYL+ D Sbjct: 265 DDAYAMLSLFNAPNLKVVGVSSVFGNTDSNSAFKLAKIVSNRFGPIA-LPVTKGAHQALNINDVQPNEATNALAKALQT-------GSLTIAAIGPATNIASLVLLHPELIERIEQVVLVASRSSANCHFIAGSKQTTPFRDLNFELDPDALRILLENDIPLVFIPFELANKFWLTGKDLDA-LKANPNVGRYLNQHSQPWLNMWCEDFGAQGFSPFDALAASYIINPNQFQSQQVSVEITIAEDDT--------KSHQFGQSNSYKPYLIASD 521 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|176502 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_14006 ID=mRNA_14006|Name=jgi.p|Trimin1|176502|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=942bp|location=Sequence derived from alignment at Contig_138:390010..391600- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GATGATGCGCTGTGCCTGCTGGCATGCATCAACAGCCCCGCCGTTGAGCTback to top protein sequence of jgi.p|Trimin1|176502 >Trimin1|176502|e_gw1.138.37.1 ID=Trimin1|176502|e_gw1.138.37.1|Name=jgi.p|Trimin1|176502|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=314bp DDALCLLACINSPAVELVGVSVTFGNANLTEMVDIARDLLDNFHPAGDLEback to top mRNA from alignment at Contig_138:390010..391600- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_14006 ID=mRNA_14006|Name=jgi.p|Trimin1|176502|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1591bp|location=Sequence derived from alignment at Contig_138:390010..391600- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_138:390010..391600- >mRNA_14006 ID=mRNA_14006|Name=jgi.p|Trimin1|176502|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=942bp|location=Sequence derived from alignment at Contig_138:390010..391600- (Tribonema minus UTEX_B_3156 )back to top |