mRNA_13970 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|176542 vs. uniprot
Match: A0A835ZB21_9STRA (Quinon protein alcohol dehydrogenase-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB21_9STRA) HSP 1 Score: 885 bits (2287), Expect = 0.000e+0 Identity = 437/437 (100.00%), Postives = 437/437 (100.00%), Query Frame = 1 Query: 1 MTAVLAHVHSFGLQSDCRSNIHFVDEGLVFYPCGSGSVLLSLETGEQQVVGGAAQGGITALGLSPNRRLLAVAERNPPDDEGVGTVYMYDVATLKRRKLLALPELGSDSIVAIAFSADGKMCLTQGAGPDWTLVLWNIEKAAKALCTVRTSAPMIGSAHAPPVRQADLCMTDPTLVCVSGDHILRFYRIAEGQLRPLNVNQKMELQDFMAHAWLPDERVALGTSTGDVLMLEGLEYHSTLMRPAGDTSERQAICCMAACGRGFVAGCVAGQLRIYERSDDPQELYRCQKVRMLEASPSGYPALTSIGVSPGEDTLAISTDTNQLYKVNLGSCDVQREDGGAGLFEHMGAPSHGPGPIQQTEGSIGGTRSARINAVDSCIWKPLVATVGADRTFRLWNYQTKVTASSLICLQLRFLRLPSDMPLTCDIALQCDGCLSK 1311 MTAVLAHVHSFGLQSDCRSNIHFVDEGLVFYPCGSGSVLLSLETGEQQVVGGAAQGGITALGLSPNRRLLAVAERNPPDDEGVGTVYMYDVATLKRRKLLALPELGSDSIVAIAFSADGKMCLTQGAGPDWTLVLWNIEKAAKALCTVRTSAPMIGSAHAPPVRQADLCMTDPTLVCVSGDHILRFYRIAEGQLRPLNVNQKMELQDFMAHAWLPDERVALGTSTGDVLMLEGLEYHSTLMRPAGDTSERQAICCMAACGRGFVAGCVAGQLRIYERSDDPQELYRCQKVRMLEASPSGYPALTSIGVSPGEDTLAISTDTNQLYKVNLGSCDVQREDGGAGLFEHMGAPSHGPGPIQQTEGSIGGTRSARINAVDSCIWKPLVATVGADRTFRLWNYQTKVTASSLICLQLRFLRLPSDMPLTCDIALQCDGCLSK Sbjct: 1 MTAVLAHVHSFGLQSDCRSNIHFVDEGLVFYPCGSGSVLLSLETGEQQVVGGAAQGGITALGLSPNRRLLAVAERNPPDDEGVGTVYMYDVATLKRRKLLALPELGSDSIVAIAFSADGKMCLTQGAGPDWTLVLWNIEKAAKALCTVRTSAPMIGSAHAPPVRQADLCMTDPTLVCVSGDHILRFYRIAEGQLRPLNVNQKMELQDFMAHAWLPDERVALGTSTGDVLMLEGLEYHSTLMRPAGDTSERQAICCMAACGRGFVAGCVAGQLRIYERSDDPQELYRCQKVRMLEASPSGYPALTSIGVSPGEDTLAISTDTNQLYKVNLGSCDVQREDGGAGLFEHMGAPSHGPGPIQQTEGSIGGTRSARINAVDSCIWKPLVATVGADRTFRLWNYQTKVTASSLICLQLRFLRLPSDMPLTCDIALQCDGCLSK 437
BLAST of jgi.p|Trimin1|176542 vs. uniprot
Match: D7FKX6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKX6_ECTSI) HSP 1 Score: 379 bits (974), Expect = 1.890e-116 Identity = 193/398 (48.49%), Postives = 264/398 (66.33%), Query Frame = 1 Query: 10 VLAHVHSFGLQSDCRSNIHFVDEGLVFYPCGSGSVLLSLETGEQQVVGGAAQGGITALGLSPNRRLLAVAERNPPDDEGVGTVYMYDVATLKRRKLLALPELGSDSIVAIAFSADGKMCLTQGAGPDWTLVLWNIEKAAKALCTVRTSAPMIGSAHAPPVRQADLCMTDPTLVCVSGDHILRFYRIAEGQLRPLNVNQKMELQDFMAHAWLPDERVALGTSTGDVLMLEGLEYHSTLMRPAGDTSERQAICCMAACGRGFVAGCVAGQLRIYERSDDPQELYRCQKVRMLEASPSGYPALTSIGVSPGEDTLAISTDTNQLYKVNLGSCDVQREDGGAGLFEHMGAPSHGPGPIQQTEGSIGGTRSARINAVDSCIWKPLVATVGADRTFRLWNYQTK 1203 VL+H H FGL++D +SN+HFVDE LV YPCG V L +E+ QQ++ G A GITAL L+ NRRLLAVAE + ++G TV +YDV L+RRK+L+ PE+GS +IV++AFSADG++CLTQG P+W LVLW EKAAK +C+V+ S+P AP V QAD C +DP +VCV+GD ILRF+R+ + Q +PL ++ KMELQ + AH WL D++V + T GD+ + E LE+ L P + AIC +AA +GFVAG G LR++ERSD+P E ++C K +EA+ S ++T++ +SP ED LA++T NQ+Y + L + D+ +ED FE M P P + G G S+RI V +WKPLVATVG D+ RLWN+Q K Sbjct: 11 VLSHGHLFGLKTDVKSNVHFVDEHLVVYPCGHSVVFLHVESRAQQLISGTASAGITALALTTNRRLLAVAE-SAMTEKGCPTVNIYDVVNLRRRKMLSWPEMGSPNIVSVAFSADGRLCLTQGGAPEWKLVLWTAEKAAKVICSVKISSPGANGDPAPAVNQADFCPSDPAVVCVTGDKILRFFRVVDAQFKPLPLSLKMELQVYTAHCWLADDQVVVSTDQGDLYLFETLEFRCALGTPTVE-----AICILAAFTKGFVAGGANGVLRVFERSDEPGEFFKCLKTFRIEANVS---SITNLAISPSEDQLALTTSNNQIYSLALSNTDILKED--TMNFERMAGPFPIPTAPTRPGGGTTGVPSSRITGVSVAVWKPLVATVGMDKALRLWNFQDK 397
BLAST of jgi.p|Trimin1|176542 vs. uniprot
Match: A0A1V9ZVW4_9STRA (WD domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVW4_9STRA) HSP 1 Score: 272 bits (696), Expect = 9.440e-79 Identity = 151/404 (37.38%), Postives = 234/404 (57.92%), Query Frame = 1 Query: 4 TAVLAHVHSFGLQSDCRSNIHFVDEGLVFYPCGSGSVLLSLETGEQQVVGG--AAQGGITALGLSPNRRLLAVAERNPPDDEGVGTVYMYDVATLKRRKLLALPELGSDSIVAIAFSADGKMCLTQGAGPDWTLVLWNIEKAAKALCTVRTSAPMIGSAHAPPVRQADLCMTDPTLVCVSGDHILRFYRIAEGQLRPLNVNQKMELQDFMAHAWLPDERVALGTSTGDVLMLEGLEYHSTLMRPAGDTSERQAICCMAACGRGFVAGCVAGQLRIYERSDDPQELYRCQKVRMLEASPSGYPALTSIGVSPGEDTLAISTDTNQLYKVNLGSCDVQREDGGAGLFEHMGAPSHGPGPIQQTEGSIGGTRSARINAVDSCIWKPLVATVGADRTFRLWNYQTKVT 1209 +A+L H + +GL+ R+NI F DE +V YPCG V+ S+ET EQQ + G GGITA+ +S +R+ +A+AE++ G +++YD+ T +R+K L+ P+LGSDS V++AFS+DGK + QG P+W LVLW+ EK K + +R+ A + + Q D D +C G ++F+++ +GQLR + K E +F+ H WLPD+RV T TG++ + E LE+ + L + +E Q I + A +GFV G G +RIYE+SDD +E ++ K ++ + + ++ +SP EDTL S ++NQL+ + L S D+ +ED A FE + P H PG S++I +D CI KPL+ T G D++ R+WNY K T Sbjct: 6 SAMLVHRYMYGLKGTVRNNIAFSDENIVVYPCGHNLVVHSIETKEQQFIHGMEGGTGGITAMAVSSSRKYIAIAEKSE-----YGLIHVYDLTTFRRKKPLSYPDLGSDSYVSLAFSSDGKYIVAQGGHPEWNLVLWSWEKI-KVVAAIRSVAQ-----YGCTIVQVDFSPNDTNTICGCGASTIKFFKVIDGQLRQQVSSLKREPGNFLCHTWLPDDRVVAATLTGELWLFENLEFRAIL---SSSPTEGQYISSLLAYSKGFVGGGSGGIIRIYEKSDDAREHFKRTKTFTIDGNSH---CIQNLAISPSEDTLVCSLESNQLFMLTLSSTDILKED--AMNFELVSTPFHRPGS----------NNSSQITGLDVCIRKPLIVTCGVDKSVRVWNYNDKST 380
BLAST of jgi.p|Trimin1|176542 vs. uniprot
Match: A0A485KTU8_9STRA (Aste57867_11744 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTU8_9STRA) HSP 1 Score: 271 bits (693), Expect = 2.080e-77 Identity = 153/405 (37.78%), Postives = 232/405 (57.28%), Query Frame = 1 Query: 4 TAVLAHVHSFGLQSDCRSNIHFVDEGLVFYPCGSGSVLLSLETGEQQVVGGAAQG---GITALGLSPNRRLLAVAERNPPDDEGVGTVYMYDVATLKRRKLLALPELGSDSIVAIAFSADGKMCLTQGAGPDWTLVLWNIEKAAKALCTVRTSAPMIGSAHAPPVRQADLCMTDPTLVCVSGDHILRFYRIAEGQLRPLNVNQKMELQDFMAHAWLPDERVALGTSTGDVLMLEGLEYHSTLMRPAGDTSERQAICCMAACGRGFVAGCVAGQLRIYERSDDPQELYRCQKVRMLEASPSGYPALTSIGVSPGEDTLAISTDTNQLYKVNLGSCDVQREDGGAGLFEHMGAPSHGPGPIQQTEGSIGGTRSARINAVDSCIWKPLVATVGADRTFRLWNYQTKVT 1209 ++ L H + +GL+ ++NI F DE +V YPCG V+ S+ET EQQ + G G G TA+ L NR+ LAVAER VG + +YD+ +++R+K L P+LG+D+ V++AFS DGK CL QG P+W LVLW+ EK K + T + SA GS + Q D D +CVSG+ +F+++A+GQL+ + K E +F+AHAWLP++RV T TG++ + E +E+ + L ++ Q + + +GFV G G +RIYE+SDD +E ++ K ++ + + ++ +SP EDTL S + NQLY + L S D+ +ED A FE + H PG ++I +D+CI KPL+ T G D++ R+WNY K T Sbjct: 12 SSTLVHRYLYGLKGSVKNNIAFCDENVVAYPCGHCIVVHSIETKEQQFLHGMEGGTSAGFTAMALGANRKYLAVAERGD-----VGVINIYDLTSMRRKKPLVYPDLGADAYVSLAFSGDGKYCLGQGGAPEWNLVLWSWEKT-KVVNTFK-SAAQYGST----IAQVDFSPADSNTICVSGNGTFKFFKVADGQLKQQANSLKREPGNFLAHAWLPEDRVVAATITGELWLFENMEFRTVL---GSSPTDGQYCSSLLSYSKGFVCGGSGGMVRIYEKSDDSREHFKRTKTFTIDGNAQ---CIHNLAISPSEDTLICSLENNQLYMLTLSSTDILKED--AMNFELVSTAFHRPG-----------ANGSQITGLDTCIRKPLIVTCGVDKSVRVWNYNDKST 386
BLAST of jgi.p|Trimin1|176542 vs. uniprot
Match: T0QGV6_SAPDV (Uncharacterized protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0QGV6_SAPDV) HSP 1 Score: 270 bits (691), Expect = 3.360e-77 Identity = 156/403 (38.71%), Postives = 230/403 (57.07%), Query Frame = 1 Query: 7 AVLAHVHSFGLQSDCRSNIHFVDEGLVFYPCGSGSVLLSLETGEQQVVGGAA--QGGITALGLSPNRRLLAVAERNPPDDEGVGTVYMYDVATLKRRKLLALPELGSDSIVAIAFSADGKMCLTQGAGPDWTLVLWNIEKAAKALCTVRTSAPMIGSAHAPPVRQADLCMTDPTLVCVSGDHILRFYRIAEGQLRPLNVNQKMELQDFMAHAWLPDERVALGTSTGDVLMLEGLEYHSTLMRPAGDTSERQAICCMAACGRGFVAGCVAGQLRIYERSDDPQELYRCQKVRMLEASPSGYPALTSIGVSPGEDTLAISTDTNQLYKVNLGSCDVQREDGGAGLFEHMGAPSHGPGPIQQTEGSIGGTRSARINAVDSCIWKPLVATVGADRTFRLWNYQTKVT 1209 A+L H + +GL+ RSN+ F +E V +PCG V+ ++ET EQQ + G GGITA+ ++ +R+ +AVAER+ G +++YD+ TL+R+K L+ P+LGSD V++AFSADGK + QG P+W LVLW+ EK K + TVR S GS V Q D D +C SG ++F+++ +GQLR + K E +F+ H WLPD+R+ TG++ + E LE+ L + S+ Q I + A +GFV G G +RIYE+SDD +E Y+ K ++ S + ++ +SP ED L S ++NQLY + L S D+ +ED A FE + P H PG S+ I +D CI KPL+ T G D++ R+WNY K T Sbjct: 8 AMLVHRYMYGLKGSVRSNVAFCEENTVVFPCGHNLVVHNIETKEQQFIHGIEGNAGGITAMAVASSRKYVAVAERSEH-----GLIHVYDLTTLRRKKPLSFPDLGSDVYVSLAFSADGKYIIAQGGHPEWNLVLWSWEKT-KVVATVR-SVSQYGST----VVQVDFSPNDNNTICASGASTIKFFKLVDGQLRQQVNSLKREPGNFLCHTWLPDDRLVAAALTGELWLFESLEFRIVL---SSSPSDGQYISSLLAYTKGFVGGGAGGVIRIYEKSDDVREQYKRTKSFTIDGSSQ---IVQNLAISPSEDMLVCSLESNQLYMLTLSSTDILKED--AMNFELVSTPFHRPGA----------NGSSHITGLDVCIRKPLIVTCGVDKSVRVWNYSDKST 381
BLAST of jgi.p|Trimin1|176542 vs. uniprot
Match: A0A7S3HTH2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTH2_9STRA) HSP 1 Score: 246 bits (628), Expect = 1.480e-70 Identity = 146/406 (35.96%), Postives = 215/406 (52.96%), Query Frame = 1 Query: 1 MTAVLAHVHSFGLQSDCRSNIHFVDEGLVFYPCGSGSVLLSLETGEQQVVGGAAQG-----GITALGLSPNRRLLAVAERNPPDDEGVGTVYMYDVATLKRRKLLALPELGSDSIVAIAFSADGKMCLTQGAGPDWTLVLWNIEKAAKALCTVRTSAPMIGSAHAPPVRQADLCMTDPTLVCVSGDHILRFYRIAEGQLRPLNVNQKMELQDFMAHAWLPDERVALGTSTGDVLMLEGLEYHSTLMRPAGDTSERQAICCMAACGRGFVAGCVAGQLRIYERSDDPQELYRCQKVRMLEASPSGYPALTSIGVSPGEDTLAISTDTNQLYKVNLGSCDVQREDGGAGLFEHMGAPSHGPGPIQQTEGSIGGTRSARINAVDSCIWKPLVATVGADRTFRLWNYQTK 1203 M+ L +FGL ++ + F +E + Y CG +++ E+ EQ + + GITA+ +S +++++AVAE+ P V YD TLK+R++L E+GS I +AFS DG+ L QGAGP+W LVLWNIEK AK +C+V+ I + PV Q C DP+ + V G ILR +R EGQLR + + EL +F++H WLPDE + +GT GD++++E E+ + G E + I CM A GRGFVAG G+LR YER DD +E Y + L P + + V+P +D+L T QL V L + ++ G G E++ HGP +I G A I +D +W+ ++ T G D T R+WN K Sbjct: 1 MSGKLVVKQAFGLNPQIKNCVAFTEEHHLAYACGHQIAVINTESKEQNFISATSTYQHQSLGITAVVVSVSKKIIAVAEKVEP----AAIVTFYDTHTLKKRRVLTYNEIGSSEIKCLAFSEDGRHMLAQGAGPEWNLVLWNIEKTAKVVCSVK-----IAQSDETPVHQISFCPWDPSTIIVVGKSILRLFRFVEGQLRQATITVRRELSNFISHLWLPDENLLVGTDAGDIMLIENFEFRGYISTSVGPDEEPRPINCMTAHGRGFVAGTNNGELRTYERQDDLKEKYALEDTCRL---PGNRGHILTFAVAP-DDSLVCGTSRQQLVSVVLSNIAGIKD--GTGGVENILTSFHGP--------NIRG--DASITGIDVAMWRQILVTTGKDGTVRVWNTADK 381
BLAST of jgi.p|Trimin1|176542 vs. uniprot
Match: A0A2R5GJ19_9STRA (Cilia-and flagella-associated protein 57 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJ19_9STRA) HSP 1 Score: 250 bits (638), Expect = 8.660e-70 Identity = 156/415 (37.59%), Postives = 223/415 (53.73%), Query Frame = 1 Query: 7 AVLAHVHSFGLQSDCRSNIHFVDEGLVFYPCGSGSVLLSLETGEQQVVGGAA-QGGITALGLSPNRRLLAVAERNPPDDEGVGTVYMYDVATLKRRKLLALPELGSDSIVAIAFSADGKMCLTQGAGPDWTLVLWNIEKAAKALCTVRTSAPMI-GSAHAPPVRQADLCMTDPTLVCVSGDHILRFYRIAEGQLRPLNVNQKMELQDFMAHAWLPD-ERVALGTSTGDVLMLEGLEYHSTL--MRPAGDTSERQAICCMAACGRGFVAGCVAGQLRIYERSDDPQELYRCQKVRMLEASPSGYPALTSIGVSPGEDTLAISTDTNQLYKVNLGSCDVQREDGGAGLFEHMGAPSHGP-----GPIQQTEGSIGGTR------SARINAVDSCIWKPLVATVGADRTFRLWNYQTK 1203 A L H FGL+SD R N+ ++DE V YPCG L +LET Q+ + G+ GGI A SPNR+L+A+AER+ V +YD ++LK+RK+LA E+ SD +V IAFS D K L QGA PDW ++ W EK C V + A + G+A + D C D T +CV GD +L+F R+ +G R L + K E+Q +M HAWL + ER+ + T TGD+L+ E EY L M+ D E I + A +G V G LR++E++DDP E YR K ++ S + ++ +SP ED ++ S NQ+Y + L + D+ + + FE + HGP G T G+ +++ +D C+ KP VAT G DRT R+WNY K Sbjct: 2 AALELEHVFGLRSDVRGNVVYLDETTVAYPCGHVVALYNLETKVQRFIHGSDWSGGICAFAASPNRKLIAIAERSAD----CPVVSIYDASSLKKRKVLACSEMRSDDLVNIAFSGDSKQILAQGAAPDWVVMAWAWEKNK---CIVSSKASNVQGNA----ITCTDFCPWDSTTLCVIGDGLLKFLRVQDGTTRSLPFSFKREIQQYMCHAWLRELERLVVATDTGDLLLFENFEYRGALAFMQQDDDGLEMLPIDSLVAYNKGLVCGGAHNSLRVFEQADDPHEYYRHTKTFTIDGKMS---RVINLALSPSEDVISCSLANNQVYVLGLSNTDILKAE--EMNFELLTTSVHGPFINDAGMAATTAGAXXXXXXEDAGAGSQVTGLDVCMRKPFVATCGIDRTVRVWNYVEK 400
BLAST of jgi.p|Trimin1|176542 vs. uniprot
Match: A0A7S2W8R2_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W8R2_9STRA) HSP 1 Score: 234 bits (598), Expect = 1.540e-69 Identity = 138/404 (34.16%), Postives = 214/404 (52.97%), Query Frame = 1 Query: 31 FGLQSDCRSNIHFVDEGLVFYPCGSGSVLLSLET-GEQQVVGGAAQGGITALGLSPNRRLLAVAERNPPDDEGVGTVYMYDVATLKRRKLLALPELGSDSIVAIAFSADGKMCLTQGAGPDWTLVLWNIEKAAKALCTVRTSAPMIGSAHAPPVRQADLCMTDPTLVCVSGDHILRFYRIAEGQLRPLNVNQKMELQDFMAHAWLPDERVALGTSTGDVLMLEGLEYHSTL----------MRPAGDTSERQAICCMAACGRGFVAGCVAGQLRIYERSDDPQELYRCQKVRMLEASPSGYPALTSIGVSPGEDTLAISTDTNQLYKVNLGSCDVQREDGGAGLFEHMGAPSHGPG----------PIQQTEGSI--GGTRSARINAVDSCIWKPLVATVGADR 1173 FGL+ D R N+ +VDE V YPCG V+L+ ET G++ + G GGI+AL +SPN++ +AVAER T+ ++D+A+LK+RK+L ++ S IV ++FS+DGK ++QG PDW ++ WN EKA S + + + D C D + VC GD +L+F RI +G +P+ + K E Q ++ HAWLP++R + T TG++ + E E+ + + +T E I + A +GF G LR++E SDDP E YR K +++ + + ++ +SP ED L S ++QLY + L + D+ + + FE + HGP +QQ + I GG+ A I +D C+ KP VAT G DR Sbjct: 8 FGLRGDIRGNVLYVDENTVIYPCGHVVVVLNTETRGQRFLPGSERSGGISALAVSPNKKFVAVAERGER-----ATITVFDIASLKKRKILTCTDIQSKDIVNLSFSSDGKQLISQGGAPDWHMICWNWEKAKVF------SGGKVSNNQGNRIICTDFCPWDNSAVCTYGDGVLKFIRIQDGTTKPIPFSFKREAQQYLCHAWLPEDRFVIATDTGELFLFESFEFRGAIGVTNKTVDPDKKKEENTLETLPIDSLVAYNKGFACGGAQNTLRVFEVSDDPHEYYRHAKTFVIDGKDA---RVMNLALSPSEDYLLCSLSSHQLYVLGLSNTDILKAE--EMNFELLTTSVHGPFIPENKSGNQVQMQQVQAQIAAGGSSPAVITGLDCCMRKPFVATAGIDR 395
BLAST of jgi.p|Trimin1|176542 vs. uniprot
Match: A0A7S3ZSU0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSU0_9STRA) HSP 1 Score: 241 bits (614), Expect = 1.030e-66 Identity = 150/403 (37.22%), Postives = 223/403 (55.33%), Query Frame = 1 Query: 10 VLAHVHSFGLQSDCRSNIHFVDEGLVFYPCGSGSVLLSLETGEQQVVGGAAQG-GITALGLSPNRRLLAVAERNPPDDEGVGTVYMYDVATLKRRKLLALPELGSDSIVAIAFSADGKMCLTQGAGPDWTLVLWNIEK-AAKALCTVRTSAPMIGSAHAPPVRQADLCMTDPTLVCVSGDH-ILRFYRIAEGQLRPLNVNQKMELQDFMAHAWLPD-ERVALGTSTGDVLMLEGLEYHSTLMRPAGDTSERQAICCMAACGRGFVAGCVAGQLRIYERSDDPQELYRCQKVRMLEASPSGYPALTSIGVSPGEDTLAISTDTNQLYKVNLGSCDVQREDGGAGLFEHMGAPSHGPGPIQQTEGSIGGTRSARINAVDSCIWKPLVATVGADRTFRLWNYQTKV 1206 VL H+FGL+ D S IH+ DE YPCG VL + E +Q+++ G Q GITAL L+P+R+ L VAER + + +YDV K+++++ ++ +D+IV +AFS DGK LTQG+GP+WTLVLW +K K + + RTS GS VR A D ++ SGD+ ILRF R+ E Q R + N K + QD++ H+++ + + + L GD+L E E+ + L P G S+ +A + A +GFVAG + G LR++E+SDDP+ Y CQ+V + + L + VSP E+TL I++ L NL +CDV D FE + H G + A+D+C KPL+ATVG+D ++W+Y+ KV Sbjct: 6 VLCARHAFGLKGDVSSPIHYGDEATTIYPCGHSVVLYNSEAKDQELIPGLPQTKGITALALAPSRKWLCVAERGLETAQ----IGVYDVVHRKKKRVVQYQDIQTDTIVHMAFSHDGKYLLTQGSGPEWTLVLWAFDKKTVKPVGSTRTSD---GSRSR--VRMASFSPRDHGIIAASGDNGILRFLRVQEHQFRAIPFNLKRDPQDYLCHSFVGNRDALVLAGENGDLLYFENFEFRALLTGPPG--SKTEATSSLVAFSKGFVAGGIEGSLRVFEKSDDPRAHYECQRVFHVNDA-----TLMDLTVSPSEETLLIASSDLALTTFNLANCDVANADDSK-CFESLATSYHAAGVL----------------ALDTCARKPLIATVGSDHLLKVWDYRRKV 375
BLAST of jgi.p|Trimin1|176542 vs. uniprot
Match: A0A7S1PBI4_9ALVE (Hypothetical protein (Fragment) n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1PBI4_9ALVE) HSP 1 Score: 225 bits (574), Expect = 1.000e-64 Identity = 136/400 (34.00%), Postives = 223/400 (55.75%), Query Frame = 1 Query: 13 LAHVHSFGLQSDCRSNIHFVDEGLVFYPCGSGSVLLSLETGEQQVVGGAAQG-GITALGLSPNRRLLAVAERNPPDDEGVGTVYMYDVATLKRRKLLALPELGSDSIVAIAFSADGKMCLTQGAGPDWTLVLWNIEKAAKALCTVRTSAPMIGSAHAPPVRQADLCMTDPTLVCVSGDHILRFYRIAEGQLRPL-NVNQKMELQDFMAHAWLPDERVALGTSTGDVLMLE-GLEYHSTLMRPAGDTSERQAICCMAACGRGFVAGCVAGQLRIYERSDDPQELYRCQKVRMLEASPSGYPALTSIGVSPGEDTLAISTDTNQLYKVNLGSCDVQREDGGAGLFEHMGAPSHGPGPIQQTEGSIGGTRSARINAVDSCIWKPLVATVGADRTFRLWNYQTK 1203 LA H FGL+SD ++ +HF +E + YP G +VL S++ Q+ GA + GITA+ +SP++R +AVAER + +YD+ T K+R+ L+ E S V++ FS++ K L+ G PDW+LV W+ +KA K + +V+ S +AH P+ + + TD TL V G+ + R +R+ +G L+PL + K E Q + H WL D+R+ +GT G++L+ + G E+ L P + R A+C MA+ +GF+ G G ++I+E+SDDP+E++R K ++ + + VSP E+ LA+ +QLY+ +L + D+ + + L + + H + + +D+CI KPL+AT GAD+T R+WNY K Sbjct: 50 LAPRHVFGLKSDVKNLLHFAEETQLIYPAGHNTVLYSIDHRTQKFFSGADETLGITAITISPSKRYVAVAERTE-----TAIISIYDLVTAKKRRSLSYAECASHEYVSLCFSSENKFLLSLGGPPDWSLVYWSWDKA-KVIASVKAS-----NAHGAPLYECSVNPTDSTLAVVIGEGVFRSFRLQDGTLKPLPHPLSKKEPQPYTCHTWLSDDRLVVGTENGELLLFDNGGEFKMVL--PCSPSEIRSALC-MASYSKGFITGGEEGAIKIFEKSDDPKEVFR--KTVDVKVENAAGSRVMGFAVSPSEEILAVGLSNSQLYQFSLAASDLLKSEEAPNL-DFLLTSFH----------------TGAVLGMDTCIRKPLMATCGADKTVRVWNYLEK 416 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|176542 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_13970 ID=mRNA_13970|Name=jgi.p|Trimin1|176542|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1314bp|location=Sequence derived from alignment at Contig_138:147136..150764+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGACGGCGGTGTTAGCACATGTGCACAGCTTTGGCCTGCAGAGCGACTGback to top protein sequence of jgi.p|Trimin1|176542 >Trimin1|176542|e_gw1.138.68.1 ID=Trimin1|176542|e_gw1.138.68.1|Name=jgi.p|Trimin1|176542|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=438bp MTAVLAHVHSFGLQSDCRSNIHFVDEGLVFYPCGSGSVLLSLETGEQQVVback to top mRNA from alignment at Contig_138:147136..150764+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_13970 ID=mRNA_13970|Name=jgi.p|Trimin1|176542|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3629bp|location=Sequence derived from alignment at Contig_138:147136..150764+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_138:147136..150764+ >mRNA_13970 ID=mRNA_13970|Name=jgi.p|Trimin1|176542|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1314bp|location=Sequence derived from alignment at Contig_138:147136..150764+ (Tribonema minus UTEX_B_3156 )back to top |