mRNA_13931 (mRNA) Tribonema minus UTEX_B_3156
|
Overview
Homology
BLAST of jgi.p|Trimin1|352527 vs. uniprot
Match: A0A835ZHQ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHQ9_9STRA) HSP 1 Score: 897 bits (2319), Expect = 0.000e+0 Identity = 525/526 (99.81%), Postives = 525/526 (99.81%), Query Frame = 3
Query: 135 MPPEYNDTMSGSSAAAESTXAGGSGEDKQQQLDALQAQIDAEDARLREARQNLRFWRHPIKVLRLFIMQASSWAKDTFHLLVTHPAVTFVGVPLVALWLFLEHVPGAYTDEHILAXXXXXXXXXXXXXXXXXXXXKNDRCEKAIKFFVWWIDXXXXXXXXXXXXVGLGVLSSVGLGTGMHSGVLFLFPHIMKVCLAADECESLDFDSAGNMWLSQDPALFACPDDDGAGGFGGGRPGYVSVLLKVYPACVLWGIGTAIGEIPPYAVSRAAALAGVHNEELDMVERLERQQSQELGKWDLMTKMKVWMVHFLQHHGFVGVFLMSAWPNMAFDLCGICCGHFLMPFWTFFGATLLGKAGVKVLLQAMFFTMLFTESALEHFMGVXXXXXXXXXXXXXXXXXXXXDVIRSVTPAQWGLGDLMHRALVSGKAQFHVKKVHAGSAAAKAKTSTPTGLAAQLKGAWQLVMFSFITFFAISCIEQFARMKAASLDAAHIEALREKAGLKRRDPPHXXXXXXXXXXXXPSNKLD 1712
MPPEYNDTMSGSSAAAEST AGGSGEDKQQQLDALQAQIDAEDARLREARQNLRFWRHPIKVLRLFIMQASSWAKDTFHLLVTHPAVTFVGVPLVALWLFLEHVPGAYTDEHILAXXXXXXXXXXXXXXXXXXXXKNDRCEKAIKFFVWWIDXXXXXXXXXXXXVGLGVLSSVGLGTGMHSGVLFLFPHIMKVCLAADECESLDFDSAGNMWLSQDPALFACPDDDGAGGFGGGRPGYVSVLLKVYPACVLWGIGTAIGEIPPYAVSRAAALAGVHNEELDMVERLERQQSQELGKWDLMTKMKVWMVHFLQHHGFVGVFLMSAWPNMAFDLCGICCGHFLMPFWTFFGATLLGKAGVKVLLQAMFFTMLFTESALEHFMGVXXXXXXXXXXXXXXXXXXXXDVIRSVTPAQWGLGDLMHRALVSGKAQFHVKKVHAGSAAAKAKTSTPTGLAAQLKGAWQLVMFSFITFFAISCIEQFARMKAASLDAAHIEALREKAGLKRRDPPHXXXXXXXXXXXXPSNKLD
Sbjct: 1 MPPEYNDTMSGSSAAAESTTAGGSGEDKQQQLDALQAQIDAEDARLREARQNLRFWRHPIKVLRLFIMQASSWAKDTFHLLVTHPAVTFVGVPLVALWLFLEHVPGAYTDEHILAXXXXXXXXXXXXXXXXXXXXKNDRCEKAIKFFVWWIDXXXXXXXXXXXXVGLGVLSSVGLGTGMHSGVLFLFPHIMKVCLAADECESLDFDSAGNMWLSQDPALFACPDDDGAGGFGGGRPGYVSVLLKVYPACVLWGIGTAIGEIPPYAVSRAAALAGVHNEELDMVERLERQQSQELGKWDLMTKMKVWMVHFLQHHGFVGVFLMSAWPNMAFDLCGICCGHFLMPFWTFFGATLLGKAGVKVLLQAMFFTMLFTESALEHFMGVXXXXXXXXXXXXXXXXXXXXDVIRSVTPAQWGLGDLMHRALVSGKAQFHVKKVHAGSAAAKAKTSTPTGLAAQLKGAWQLVMFSFITFFAISCIEQFARMKAASLDAAHIEALREKAGLKRRDPPHXXXXXXXXXXXXPSNKLD 526
BLAST of jgi.p|Trimin1|352527 vs. uniprot
Match: D7FTV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV0_ECTSI) HSP 1 Score: 323 bits (829), Expect = 2.660e-99 Identity = 192/459 (41.83%), Postives = 249/459 (54.25%), Query Frame = 3
Query: 282 RQNLRFWRHPIKVLRLFIMQASSWAKDTFHLLVTHPAVTFVGVPLVALWLFLEHVPGAYTDEHILAXXXXXXXXXXXXXXXXXXXXKNDRCEKAIKFFVWWIDXXXXXXXXXXXXVGLGVLSSVGLGTGMHSGVLFLFPHIMKVCLAADECESLDFDSAGNMWLSQDPALFAC-PDDD---------------------GAGGFGGGRPGYVSVLLKVYPACVLWGIGTAIGEIPPYAVSRAAALAGVHNEELDMVERLERQQSQELGKWDLMTKMKVWMVHFLQHHGFVGVFLMSAWPNMAFDLCGICCGHFLMPFWTFFGATLLGKAGVKVLLQAMFFTMLFTESALEHFMGVXXXXXXXXXXXXXXXXXXXXDVIRSVTPAQWGLGDLMHRALVSGKAQFHVKKVHAGSAAAKAKTSTPTG-----LAAQLKGAWQLVMFSFITFFAISCIEQFAR 1577
R+ + FWRHPI LRLF WA+ + + HPA V +P VA L LE VPG +T + A + +KF +WW VGLG +SSVGLG G +GVLFLFPHIMK CLA +EC SLDF S+G+MW S A+F+C P+D+ G GG + ++ +KVYPAC+LWGIGTAIGEIPPYA+SRAAA AG +E + + LE + + LGK+DL+T++K+WM+ L+ GF+GVFL+++ PNMAFDLCG+CCGHF+MPF TFF A LLGKAGVK++LQ FFTM F E LE F+ VIR TP LG ++H ALV KAQFH S G + ++LK W +V+ + FA SCIE+ A+
Sbjct: 69 RRRIGFWRHPIVTLRLFGKCVVRWARSSARAVAAHPAFVLVAIPGVAALLVLEAVPGPHTAFLVQA-------------------------KHVVKFVLWW--------------VGLGTVSSVGLGCGFQTGVLFLFPHIMKTCLAVEECNSLDFPSSGDMWFSASDAIFSCGPEDELFNAASGEVLAGAHEDFLLGGGVGGHAASQVSFLGTFMKVYPACLLWGIGTAIGEIPPYALSRAAAEAGEEADEDEELLDLENRDPKLLGKFDLVTRIKMWMIGLLKRKGFMGVFLLASVPNMAFDLCGMCCGHFMMPFSTFFSAVLLGKAGVKIILQTAFFTMAFHEHHLEAFI----------------------TVIRRWTPESLNLGGILHVALVQMKAQFHTLAGEGESVVQAVDIEDGAGGVVEAVISRLKAGWTVVLVVIVLAFAGSCIEEIAK 466
BLAST of jgi.p|Trimin1|352527 vs. uniprot
Match: A0A6H5JRW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRW9_9PHAE) HSP 1 Score: 316 bits (809), Expect = 1.000e-95 Identity = 196/475 (41.26%), Postives = 254/475 (53.47%), Query Frame = 3
Query: 282 RQNLRFWRHPIKVLRLFIMQASSWAKDTFHLLVTHPAVTFVGVPLVALWLFLEHVPGAYTDEHILAXXXXXXXXXXXXXXXXXXXXKNDRCEKAIKFFVWWIDXXXXXXXXXXXXVGLGVLSSVGLGTGMHSGVLFLFPHIMKVCLAADECESLDFDSAGNMWLSQDPALFAC-PDDD---------------------GAGGFGGGRPGYVSVLLKVYPACVLWGIGTAIGEIPPYAVSRAAALAGVHNEELDMVERLERQQSQELGKWDLMTKMKVWMVHFLQHHGFVGVFLMSAWPNMAFDLCGICCGHFLMPFWTFFGATLLGKAGVKVLLQAMFFTMLFTESALEHFMGVXXXXXXXXXXXXXXXXXXXXDVIRSVTPAQWGLGDLMHRALVSGKAQFHVKKVHAGSAAAKAKTSTPTG-----LAAQLKGAWQLVMFSFITFFAISCIEQFARMKAASLDAAHIEALRE 1625
R+ + F RHPI LRLF + WA+ + + HPA V +P VA L LE VPG +T + A + +KF VWW VGLG +SSVGLG G +GVLFLFPHIMK CLA +EC+SLDF S+G+MW S A+F+C P+D+ GAGG + ++ +KVYPAC+LWGIGTAIGEIPPYA+SRAAA AG +E + + LE + + LGK+DL+T++K+WM+ L+ GF+GVFL+++ PNMAFDLCG+CCGHF+MPF TFF A LLGKAG+ +LQ FFTM F E LE F+ VIR TP LG ++H ALV KAQFH A G + ++LK W +V+ + FA SCIE+ A+ AA D I E
Sbjct: 69 RRRIGFLRHPIITLRLFGKCVARWARSSARAVAAHPAFALVAIPGVAALLVLEAVPGPHTAFLMQA-------------------------KHVVKFVVWW--------------VGLGTVSSVGLGCGFQTGVLFLFPHIMKTCLAVEECKSLDFPSSGDMWFSASDAIFSCGPEDEHFNAASGEVLAGADEDFLLGGGAGGHAASQVSFLGTFMKVYPACLLWGIGTAIGEIPPYALSRAAAEAGEEADEDEELLDLENRDPKLLGKFDLVTRIKMWMIGLLKRKGFMGVFLLASVPNMAFDLCGMCCGHFMMPFSTFFSAVLLGKAGI--ILQTAFFTMAFHEHHLEAFI----------------------TVIRRWTPESLNLGGILHVALVQMKAQFHTLAGEGELAVQAMDIEDGAGGVVEAVISRLKAGWTVVLVVIVLAFAGSCIEEIAKRSAAYEDKETIRVFAE 480
BLAST of jgi.p|Trimin1|352527 vs. uniprot
Match: A0A662YBP0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YBP0_9STRA) HSP 1 Score: 299 bits (766), Expect = 1.330e-91 Identity = 189/451 (41.91%), Postives = 240/451 (53.22%), Query Frame = 3
Query: 270 LREARQNLRFWRHPIKVLRLFIMQASSWAKDTFHLLVTHPAVTFVGVPLVALWLFLEHVPGAYTDEHILAXXXXXXXXXXXXXXXXXXXXKNDRCEKAIKFFVWWIDXXXXXXXXXXXXVGLGVLSSVGLGTGMHSGVLFLFPHIMKVCLAADECESLDFDSAGNMWLSQDPALFACPDDDGAGGFGGGRPGYVSVLLKVYPACVLWGIGTAIGEIPPYAVSRAAALAGVHNEELDMVERLERQQSQELGKWDLMTKMKVWMVHFLQHHGFVGVFLMSAWPNMAFDLCGICCGHFLMPFWTFFGATLLGKAGVKVLLQAMFFTMLFTESAL---EHFMGVXXXXXXXXXXXXXXXXXXXXDVIRSVTPAQWGLGDLMHRALVSGKAQFHVKKVHAGSAAAKAKTSTPTGLAAQLKGAWQLVMFSFITFFAISCIEQFARMKAASLDAAHIE 1613
LR R+ L R P++VL F + +++ + H A FV +PL+ LWL G + +L D +KF WW VGLGVLSSVGLGTGMHSG+LFLFPHI V A EC SLDFDS +MW S A D F ++ KV+ C+LWG GTA GEIPPYA+SRAA LAG NEE + + ++ ++++M +MK WM+ FL+ HGF GV LMSAWPNMAFDLCGICCGHFLMPFWTFFGATL+GKA +KV LQA FF +FT++ + E F+G VTPAQWGLG + L+ + +FH V A + A + T L +QL G+W VM +FI +FAISCIEQFA+ AA D ++
Sbjct: 19 LRLERKKLTLLRRPLRVLYHFSFVLARFSQWLVLTVARHKATRFVLLPLLLLWLAASSRDGPHRT--VL-----------------------DEFNTTVKFVTWW--------------VGLGVLSSVGLGTGMHSGMLFLFPHIFLVVQGAQECRSLDFDSRTHMWFSAFEASCQNVPDQSTVTF-------AAIFWKVFWPCMLWGAGTAAGEIPPYALSRAAKLAGQRNEEFEEI-------AESTSQFNVMNRMKEWMISFLEKHGFWGVLLMSAWPNMAFDLCGICCGHFLMPFWTFFGATLIGKALIKVNLQAAFFITIFTDAHMKRVEAFIG-------------------------RVTPAQWGLGSRVSEFLLECREKFHTAHVKAAAEQASGGAAASTSLVSQL-GSW--VMVAFIAYFAISCIEQFAQQHAAEEDEEKVK 388
BLAST of jgi.p|Trimin1|352527 vs. uniprot
Match: A0A0P1APX1_PLAHL (Vacuole membrane protein VMP1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APX1_PLAHL) HSP 1 Score: 294 bits (752), Expect = 1.420e-89 Identity = 182/452 (40.27%), Postives = 247/452 (54.65%), Query Frame = 3
Query: 270 LREARQNLRFWRHPIKVLRLFIMQASSWAKDTFHLLVTHPAVTFVGVPLVALWLFLEHVPGAYTDEHILAXXXXXXXXXXXXXXXXXXXXKNDRCEKAIKFFVWWIDXXXXXXXXXXXXVGLGVLSSVGLGTGMHSGVLFLFPHIMKVCLAADECESLDFDSAGNMWL-SQDPALFACPDDDGAGGFGGGRPGYVSVLLKVYPACVLWGIGTAIGEIPPYAVSRAAALAGVHNEELDMVERLERQQSQELGKWDLMTKMKVWMVHFLQHHGFVGVFLMSAWPNMAFDLCGICCGHFLMPFWTFFGATLLGKAGVKVLLQAMFFTMLFTESALEHFMGVXXXXXXXXXXXXXXXXXXXXDVIRSVTPAQWGLGDLMHRALVSGKAQFHVKKVHAGSAAAKAKTSTPTGLAAQLKGAWQLVMFSFITFFAISCIEQFARMKAASLDAAHIEALR 1622
LR+ R+ L +R P VL F + + K + A FV +PL+ LWL G++ ++L D +++KF WW GLGVLSSVGLGTGMHSG+LFLFPHI V A+EC+SLDFDS +MW S + P+ + ++ KV+ C+LWG GTA GEIPPYA+SRAA LAG+ NEE + + ++ ++++M KMK WM+ FLQ HGF GV LMSAWPNMAFDLCGICCGHFLMPFWTFFGATL+GKA +K LQA FF +FT++ L+ + I +TP QWGLG ++ L+ + +FH +V+A + A ++ L +QL G+W +M +FI +FAISCIEQFA+ AA D ++ ++
Sbjct: 16 LRQERKKLTLFRRPFSVLYHFSIVLLHFLKWLALRVQRSRATRFVLLPLLVLWLVASGRDGSH--RYLL-----------------------DNFNESVKFVAWWF--------------GLGVLSSVGLGTGMHSGILFLFPHIFLVVQGAEECKSLDFDSRHHMWFHSFEANCNRVPEVS--------TVTFAAIFWKVFLPCMLWGAGTAAGEIPPYALSRAARLAGLPNEEFEEI-------AESKSQFNVMNKMKDWMIRFLQRHGFWGVLLMSAWPNMAFDLCGICCGHFLMPFWTFFGATLIGKALIKANLQAAFFITIFTDAHLKQVEAL----------------------IGLITPEQWGLGSRVNEFLLECRKKFHSAQVNAAAEHAGTAAASTGSLVSQL-GSW--IMVAFIAYFAISCIEQFAQQHAAEEDEKKLKKMK 388
BLAST of jgi.p|Trimin1|352527 vs. uniprot
Match: A0A3M6VC90_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VC90_9STRA) HSP 1 Score: 293 bits (750), Expect = 2.720e-89 Identity = 184/443 (41.53%), Postives = 238/443 (53.72%), Query Frame = 3
Query: 270 LREARQNLRFWRHPIKVLRLFIMQASSWAKDTFHLLVTHPAVTFVGVPLVALWLFLEHVPGAYTDEHILAXXXXXXXXXXXXXXXXXXXXKNDRCEKAIKFFVWWIDXXXXXXXXXXXXVGLGVLSSVGLGTGMHSGVLFLFPHIMKVCLAADECESLDFDSAGNMWLSQDPALFACPDDDGAGGFGGGRPGYVSVLLKVYPACVLWGIGTAIGEIPPYAVSRAAALAGVHNEELDMVERLERQQSQELGKWDLMTKMKVWMVHFLQHHGFVGVFLMSAWPNMAFDLCGICCGHFLMPFWTFFGATLLGKAGVKVLLQAMFFTMLFTESALEHFMGVXXXXXXXXXXXXXXXXXXXXDVIRSVTPAQWGLGDLMHRALVSGKAQFHVKKVHAGSAAAKAKTSTPTGLAAQLKGAWQLVMFSFITFFAISCIEQFARMKAASLD 1598
LR+ R+ L +R P+ V F + + K + + A FV +PL+ LWL G + H L D IKF VWW VGLGVLSSVGLGTGMHSG+LFLFPHI V A+EC+SLDFDS +MW P C D + ++ KV+ C+LWG GTA GEIPPYA+SRAA LAG NEE + + ++ +++LM MK WM+ FL+ HGF GV LMSAWPNMAFDLCGICCGHFLMPFWTFFGATL+GKA +K +QA FF +FT++ L+ + I +TP QWGLG + L+ + +FH +V A + A ++ + L +QL G+W +M +FI +FAISCIEQFA+ AA D
Sbjct: 15 LRQERKKLTLFRRPLSVFYHFGIVFFRFCKWLALKIQRNAATRFVLLPLLILWLVASSRDGPH---HQLL----------------------DEFNNNIKFVVWW--------------VGLGVLSSVGLGTGMHSGILFLFPHIFLVVQGAEECKSLDFDSRHHMWFH--PFEANCNDVSEVS-----TVTFAAIFWKVFLPCILWGAGTAAGEIPPYALSRAAKLAGQRNEEFEEI-------AESKSQYNLMNSMKDWMIRFLEKHGFWGVLLMSAWPNMAFDLCGICCGHFLMPFWTFFGATLIGKALIKANMQAAFFITIFTDAHLKRVEAL----------------------IGRITPEQWGLGSRVSEFLLECREKFHSAQVKAAAEHAGTAATSGSSLVSQL-GSW--IMVAFIGYFAISCIEQFAQQHAAEED 379
BLAST of jgi.p|Trimin1|352527 vs. uniprot
Match: A0A1V9ZBV4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZBV4_9STRA) HSP 1 Score: 293 bits (750), Expect = 5.030e-89 Identity = 187/466 (40.13%), Postives = 245/466 (52.58%), Query Frame = 3
Query: 249 IDAEDARLREARQNLRFWRHPIKVLRLFIMQASSWAKDTFHLLVTHPAVTFVGVPLVALWLFLEHVPGAYTDEHILAXXXXXXXXXXXXXXXXXXXXKNDRCEKAIKFFVWWIDXXXXXXXXXXXXVGLGVLSSVGLGTGMHSGVLFLFPHIMKVCLAADECESLDFDSAGNMWLSQDPALFACPDDDGAGGFGGGRPGYVSVLLKVYPACVLWGIGTAIGEIPPYAVSRAAALAGVHNEELDMVERLERQQSQELGKWDLMTKMKVWMVHFLQHHGFVGVFLMSAWPNMAFDLCGICCGHFLMPFWTFFGATLLGKAGVKVLLQAMFFTMLFTES---ALEHFMGVXXXXXXXXXXXXXXXXXXXXDVIRSVTPAQWGLGDLMHRALVSGKAQFHVKKVHAGSAAAKAKTSTPTGLAAQ---LKGAWQLVMFSFITFFAISCIEQFARMKAASLDAAHIEALREK 1628
+ A +A+LRE R+ L F+R P VL F + + K LV H FV +PL LWL G + + IL D+ +KF VWW VGLGVLSSVGLGTGMHSG+LFLFPHI V A+ C+SLDFD+ + W A + F + KV+ C+LWG GTA+GEIPPYA+SRAA LAG NEE + + ++ ++++M MK WM+ FLQ HGF GV LMSAWPNMAFDLCGICCGHFLMPFWTFFGATL+GKA +KV +QA FF +FT++ +E+F+G +TPA W L + L+ + +FH +A+ AK + TG A + L+M +F+ +FAISCIEQFA+ AA DA +EA ++
Sbjct: 26 LQAFEAKLREERKKLTFFRRPFAVLYHFSIVFVQFLKWFVVYLVNHSVTRFVALPLFLLWLGATFTNGEH--QPIL-----------------------DQFNTYVKFIVWW--------------VGLGVLSSVGLGTGMHSGILFLFPHIFLVVQGAEICKSLDFDTFHHTWFRSFEANCVNVPETSIVTF-------AKIFAKVFLPCMLWGAGTAMGEIPPYALSRAARLAGQRNEEFEEI-------TESSSEYNIMNSMKDWMIGFLQRHGFWGVLLMSAWPNMAFDLCGICCGHFLMPFWTFFGATLIGKALIKVNMQAAFFITIFTDAHMKQIENFIG-------------------------KITPASWALDQKVSEFLLECRKKFH-------AASDSAKLAHETGAEASSSIISQVGSLIMIAFMGYFAISCIEQFAQQHAAEEDAKKVEAFEKQ 406
BLAST of jgi.p|Trimin1|352527 vs. uniprot
Match: G4YKZ1_PHYSP (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=G4YKZ1_PHYSP) HSP 1 Score: 292 bits (748), Expect = 5.060e-89 Identity = 189/449 (42.09%), Postives = 241/449 (53.67%), Query Frame = 3
Query: 270 LREARQNLRFWRHPIKVLRLFIMQASSWAKDTFHLLVTHPAVTFVGVPLVALWLFLEHVPGAYTDEHILAXXXXXXXXXXXXXXXXXXXXKNDRCEKAIKFFVWWIDXXXXXXXXXXXXVGLGVLSSVGLGTGMHSGVLFLFPHIMKVCLAADECESLDFDSAGNMWLSQDPALFAC---PDDDGAGGFGGGRPGYVSVLLKVYPACVLWGIGTAIGEIPPYAVSRAAALAGVHNEELDMVERLERQQSQELGKWDLMTKMKVWMVHFLQHHGFVGVFLMSAWPNMAFDLCGICCGHFLMPFWTFFGATLLGKAGVKVLLQAMFFTMLFTESAL---EHFMGVXXXXXXXXXXXXXXXXXXXXDVIRSVTPAQWGLGDLMHRALVSGKAQFHVKKVHAGSAAAKAKTSTPTGLAAQLKGAWQLVMFSFITFFAISCIEQFARMKAASLD 1598
LR+ R+ L +R P+ VL F + + K + A FV +PL+ LWL G + +L D +++F VWW VGLGVLSSVGLGTGMHSG+LFLFPHI V A EC+SLDFDS +MW P C PD+ + ++ KV+ C+LWG GTA GEIPPYA+SRAA LAG NEE + + S+ +++LM MK WM+ FL+ HGF GV LMSAWPNMAFDLCGICCGHFLMPFWTFFGATL+GKA +KV LQA FF +FT++ L E F+G VTP QWG+G + L+ + +FH +V A + A + + L +QL G+W VM +FI +FAISCIEQFA+ AA D
Sbjct: 13 LRQERKKLTLFRRPLSVLYHFGVVFLRFLKWLALRVERSSATRFVLLPLLLLWLVASSRDGPH--RQLL-----------------------DEFNASVQFVVWW--------------VGLGVLSSVGLGTGMHSGILFLFPHIFLVVQGAQECKSLDFDSRHHMWFH--PFEANCNNVPDES--------TVTFAAIFWKVFLPCMLWGAGTAAGEIPPYALSRAAKLAGQRNEEFEEI-------SESKSQYNLMNSMKDWMIRFLEKHGFWGVLLMSAWPNMAFDLCGICCGHFLMPFWTFFGATLIGKALIKVNLQAAFFITIFTDAHLKRVEAFIG-------------------------RVTPEQWGMGSRVSEFLLECRHKFHSAQVKAAAEHAGTAVESSSSLVSQL-GSW--VMVAFIGYFAISCIEQFAQQHAAEED 377
BLAST of jgi.p|Trimin1|352527 vs. uniprot
Match: A0A067C731_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C731_SAPPC) HSP 1 Score: 291 bits (746), Expect = 2.150e-88 Identity = 190/468 (40.60%), Postives = 246/468 (52.56%), Query Frame = 3
Query: 231 DALQAQIDAEDARLREARQNLRFWRHPIKVLRLFIMQASSWAKDTFHLLVTHPAVTFVGVPLVALWLFLEHVPGAYTDEHILAXXXXXXXXXXXXXXXXXXXXKNDRCEKAIKFFVWWIDXXXXXXXXXXXXVGLGVLSSVGLGTGMHSGVLFLFPHIMKVCLAADECESLDFDSAGNMWLSQDPALFACPDDDGAGGFGGGRPGYVSVLLKVYPACVLWGIGTAIGEIPPYAVSRAAALAGVHNEELDMVERLERQQSQELGKWDLMTKMKVWMVHFLQHHGFVGVFLMSAWPNMAFDLCGICCGHFLMPFWTFFGATLLGKAGVKVLLQAMFFTMLFTES---ALEHFMGVXXXXXXXXXXXXXXXXXXXXDVIRSVTPAQWGLGDLMHRALVSGKAQFHVKKVHAGSAAAKAKTSTPTGLAAQ---LKGAWQLVMFSFITFFAISCIEQFARMKAASLDAAHIEA 1616
DA + +A LREAR+ L +R P+ VL F + + K LV H FV +PL +WL G D +L + ++F VWW VGLGVLSSVGLGTGMHSG+LFLFPHI V + C+SLDFD+ + W A A + + F + LKV+ +LWG GTA+GEIPPYA+SRAA LAG NEE + + ++ ++++M +MK WM+ FLQ HGF GV LMSAWPNMAFDLCGICCGHFLMPFWTFFGATL+GKA +KV +QA FF +FT++ +EHF+G SVTPA W L + L+ + +FH +A+ AK + TG A + LVM +F+ FFA+SCIEQFA+ AA DAA +EA
Sbjct: 23 DAKSPAVATYEAELREARKKLTLFRRPLAVLYHFSIVLVGFLKWLALYLVQHNVTRFVALPLFLVWLGATKTEG---DHQVLLG----------------------QFNTYVEFVVWW--------------VGLGVLSSVGLGTGMHSGILFLFPHIFLVVQGGEICKSLDFDTFHHTWFRSFEANCASVPETSSVTF-------AKIFLKVFLPSMLWGAGTAMGEIPPYALSRAARLAGQRNEEFEEI-------TESSSEFNVMNRMKDWMIGFLQRHGFWGVLLMSAWPNMAFDLCGICCGHFLMPFWTFFGATLIGKALIKVNMQAAFFITIFTDAHMKQIEHFIG-------------------------SVTPAAWALDQKVSDFLLECRNKFH-------AASDSAKIAHETGAEAGSSLISQLGSLVMVAFMGFFAVSCIEQFAQQHAAEEDAAKVEA 405
BLAST of jgi.p|Trimin1|352527 vs. uniprot
Match: A0A1V9YKP1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKP1_9STRA) HSP 1 Score: 291 bits (745), Expect = 2.840e-88 Identity = 190/469 (40.51%), Postives = 242/469 (51.60%), Query Frame = 3
Query: 231 DALQAQIDAEDARLREARQNLRFWRHPIKVLRLFIMQASSWAKDTFHLLVTHPAVTFVGVPLVALWLFLEHVPGAYTDEHILAXXXXXXXXXXXXXXXXXXXXKNDRCEKAIKFFVWWIDXXXXXXXXXXXXVGLGVLSSVGLGTGMHSGVLFLFPHIMKVCLAADECESLDFDSAGNMWLSQDPALFACPDDDGAGGFGGGRPGYVSVLLKVYPACVLWGIGTAIGEIPPYAVSRAAALAGVHNEELDMVERLERQQSQELGKWDLMTKMKVWMVHFLQHHGFVGVFLMSAWPNMAFDLCGICCGHFLMPFWTFFGATLLGKAGVKVLLQAMFFTMLFTESALEHFMGVXXXXXXXXXXXXXXXXXXXXDVIRSVTPAQWGLGDLMHRALVSGKAQFHVKKVHAGSAAAKAKTSTPTGLAAQLKGAWQL---VMFSFITFFAISCIEQFARMKAASLDAAHIEALREK 1628
DA + A +A LR+ R+ L +R P+ VL F + + K LV H FV +PL +WL PG EH + + ++F VWW VGLGVLSSVGLGTGMHSG+LFLFPHI V A+ C+SLDFD+ + W A A F + LKV+ C+LWG GTA+GEIPPYA+SRAA LAG NEE + + ++ +++M MK WM+ FLQ HGF GV LMSAWPNMAFDLCGICCGHFLMPFWTFFGATL+GKA +KV +QA FF +FT++ ++ I +VTPA W L + LV + +FH +A+ AK + TG A Q+ VM +F+ FFAISCIEQFA+ AA DA +EA K
Sbjct: 20 DAKSPAVAAFEASLRDERKKLTLFRRPLAVLYHFSIVLVGFLKWLLVYLVQHNVTRFVALPLFLVWLGATKTPG----EHQVLV---------------------QQFNTYVEFVVWW--------------VGLGVLSSVGLGTGMHSGILFLFPHIFLVVQGAEICQSLDFDTFHHTWFRSFEANCAAVPATSTVTF-------AKIFLKVFLPCMLWGAGTAMGEIPPYALSRAARLAGQRNEEFEEI-------TESSSDYNVMNSMKDWMIGFLQRHGFWGVLLMSAWPNMAFDLCGICCGHFLMPFWTFFGATLIGKALIKVNMQAAFFITIFTDAHMKQ----------------------VERFIAAVTPASWALDQKVSDFLVECRNKFH-------AASDSAKLAHETGAEASSSLISQIGSFVMVAFMAFFAISCIEQFAQQHAAEEDAKKVEAFAAK 406
BLAST of jgi.p|Trimin1|352527 vs. uniprot
Match: A0A836CNA5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNA5_9STRA) HSP 1 Score: 170 bits (430), Expect = 8.380e-52 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 1
Query: 1 MQRLAYLELQVNVVELVPLLPNLSRQLKRKVVGGALLLVRRVRKADSEAGCEVGALLVANLXXXXXXXXXXXXXXXTVAGVRLGFAANEQACRDGACAVHSQEVTST 321
MQRLAYLELQVNVVELVPLLPNLSRQLKRKVVGGALLLVRRVRKADSEAGCEVGALLVANLXXXXXXXXXXXXXXXTVAGVRLGFAANEQACRDGACAVHSQEVTST
Sbjct: 1 MQRLAYLELQVNVVELVPLLPNLSRQLKRKVVGGALLLVRRVRKADSEAGCEVGALLVANLXXXXXXXXXXXXXXXTVAGVRLGFAANEQACRDGACAVHSQEVTST 107 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352527 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to top
BLAST of jgi.p|Trimin1|352527 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_13931 ID=mRNA_13931|Name=jgi.p|Trimin1|352527|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2075bp|location=Sequence derived from alignment at Contig_122:288137..296422- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CAGAGACGAGACGAGGTGATGGACCGCTAGCAGCTAGCTCCTGCTACGGCback to top protein sequence of jgi.p|Trimin1|352527 >Trimin1|352527|estExt_Genemark1.C_Ctg_1220033 ID=Trimin1|352527|estExt_Genemark1.C_Ctg_1220033|Name=jgi.p|Trimin1|352527|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=527bp MPPEYNDTMSGSSAAAESTTAGGSGEDKQQQLDALQAQIDAEDARLREARback to top mRNA from alignment at Contig_122:288137..296422- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_13931 ID=mRNA_13931|Name=jgi.p|Trimin1|352527|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8286bp|location=Sequence derived from alignment at Contig_122:288137..296422- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_122:288137..296422- >mRNA_13931 ID=mRNA_13931|Name=jgi.p|Trimin1|352527|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1581bp|location=Sequence derived from alignment at Contig_122:288137..296422- (Tribonema minus UTEX_B_3156 )back to top |