mRNA_13872 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|177840 vs. uniprot
Match: A0A836CJP8_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJP8_9STRA) HSP 1 Score: 291 bits (746), Expect = 4.390e-100 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 1
Query: 1 MLVAQASALYTLGIRDSIMIAHSFKGAEFGPAQQMHGATYTCDVEFCCPELTPSLNWVIDIGEASNMLSGVLAEYNFKNLNEVFPDENTTTEFMCRRIFDGVARACAGRFCGTIRVKLWESHKAWASYEGAVADYTRDV 417
MLVAQASALYTLGIRDSIMIAHSFKGAEFGPAQQMHGATYTCDVEFCCPELTPSLNWVIDIGEASNMLSGVLAEYNFKNLNEVFPDENTTTEFMCRRIFDGVARACAGRFCGTIRVKLWESHKAWASYEGAVADYTRDV
Sbjct: 1 MLVAQASALYTLGIRDSIMIAHSFKGAEFGPAQQMHGATYTCDVEFCCPELTPSLNWVIDIGEASNMLSGVLAEYNFKNLNEVFPDENTTTEFMCRRIFDGVARACAGRFCGTIRVKLWESHKAWASYEGAVADYTRDV 139
BLAST of jgi.p|Trimin1|177840 vs. uniprot
Match: A0A7S4DL62_HETAK (6-pyruvoyltetrahydropterin synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DL62_HETAK) HSP 1 Score: 183 bits (465), Expect = 4.260e-57 Identity = 90/127 (70.87%), Postives = 102/127 (80.31%), Query Frame = 1
Query: 16 ASALYTLGIRDSIMIAHSFKGAEFGPAQQMHGATYTCDVEFCCPELTPSLNWVIDIGEASNMLSGVLAEYNFKNLNEVFPDENTTTEFMCRRIFDGVARACAGRFCGTIRVKLWESHKAWASYEGAV 396
A A ++LG+RDSIMIAHSFKG EFGPAQQMHGATYT DVEF EL NWV+DIGEAS +LS VL +YNFKNLNE+FPD+NTTTEFMC+ IFD +A AC F G++ VKL ESHKAWASY G V
Sbjct: 25 AHAKFSLGVRDSIMIAHSFKGEEFGPAQQMHGATYTVDVEFEAEELVDKCNWVVDIGEASEILSNVLRKYNFKNLNELFPDDNTTTEFMCKAIFDDIA-ACLENFKGSMCVKLHESHKAWASYTGDV 150
BLAST of jgi.p|Trimin1|177840 vs. uniprot
Match: L1J9Q7_GUITC (6-pyruvoyltetrahydropterin synthase n=3 Tax=Guillardia theta TaxID=55529 RepID=L1J9Q7_GUITC) HSP 1 Score: 181 bits (458), Expect = 1.760e-55 Identity = 84/119 (70.59%), Postives = 94/119 (78.99%), Query Frame = 1
Query: 28 YTLGIRDSIMIAHSFKGAEFGPAQQMHGATYTCDVEFCCPELTPSLNWVIDIGEASNMLSGVLAEYNFKNLNEVFPDENTTTEFMCRRIFDGVARACAGRFCGTIRVKLWESHKAWASY 384
Y+LG+RDSIMIAHSF G EFGPAQ MHGATYT DVEF L P LNWV+DIGE ML VL EYNFKNLNE+FP ENTTTEFMC++IF+G+ G+F G+I VKLWESH AWASY
Sbjct: 63 YSLGLRDSIMIAHSFTGKEFGPAQNMHGATYTVDVEFHVESLAPRLNWVLDIGEGMTMLKKVLGEYNFKNLNELFPGENTTTEFMCKKIFEGLCVELKGKFKGSITVKLWESHSAWASY 181
BLAST of jgi.p|Trimin1|177840 vs. uniprot
Match: D8LHK0_ECTSI (6-pyruvoyltetrahydropterin synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHK0_ECTSI) HSP 1 Score: 178 bits (452), Expect = 5.940e-55 Identity = 82/125 (65.60%), Postives = 97/125 (77.60%), Query Frame = 1
Query: 28 YTLGIRDSIMIAHSFKGAEFGPAQQMHGATYTCDVEFCCPELTPSLNWVIDIGEASNMLSGVLAEYNFKNLNEVFPDENTTTEFMCRRIFDGVARACAGRFCGTIRVKLWESHKAWASYEGAVAD 402
Y+LGIRDSIMIAHSF+G +FGPAQ+MHGATYT D EF L NWV+DIG AS ML+ VL++YNFKNLNE+FP +NTTTEFMC+ IFD +A C F GT+ +KLWESHKAW YEG V +
Sbjct: 33 YSLGIRDSIMIAHSFEGPQFGPAQEMHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLAAVLSKYNFKNLNEIFPGQNTTTEFMCKVIFDELAAKCGKDFHGTLCIKLWESHKAWGCYEGDVGE 157
BLAST of jgi.p|Trimin1|177840 vs. uniprot
Match: A0A7S2V5M2_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5M2_9STRA) HSP 1 Score: 176 bits (445), Expect = 5.020e-54 Identity = 81/120 (67.50%), Postives = 98/120 (81.67%), Query Frame = 1
Query: 28 YTLGIRDSIMIAHSFKGAEFGPAQQMHGATYTCDVEFCCPELTPSLNWVIDIGEASNMLSGVLAEYNFKNLNEVFPDENTTTEFMCRRIFDGVARACAGRFCGTIRVKLWESHKAWASYE 387
YTLG++DSIMIAHSF+G EFGPAQ++HGATYT DVEF L NWVIDIG AS +L VLA+YNFKNL+E+FPD+NTTTEFMC+ IFD ++ A +F G++ VKLWESHKAWASY+
Sbjct: 30 YTLGVKDSIMIAHSFQGEEFGPAQKLHGATYTVDVEFMADVLESKCNWVIDIGLASEILGKVLAKYNFKNLDELFPDDNTTTEFMCKVIFDDMSAELANKFKGSLSVKLWESHKAWASYQ 149
BLAST of jgi.p|Trimin1|177840 vs. uniprot
Match: W7T312_9STRA (6-pyruvoyltetrahydropterin synthase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T312_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.530e-48 Identity = 85/132 (64.39%), Postives = 96/132 (72.73%), Query Frame = 1
Query: 28 YTLGIRDSIMIAHSFKGAEFGPAQQMHGATYTCDVEFCCPELTPSLNWVIDIGEASNMLSGVLAEYNFKNLNEVFPD-ENTTTEFMCRRIF-DGVARACAGR-------FCGTIRVKLWESHKAWASYEGAV 396
++LGIRDSIMIAHSFKG +FGPAQ +HGATYT DV F L P NWVIDIGEAS LS +L++YNFKNL++VFP+ ENTTTEFMCR I D A C R F G+I VKLWESHKAWA YE V
Sbjct: 33 FSLGIRDSIMIAHSFKGEQFGPAQNIHGATYTVDVTFRSKNLVPKNNWVIDIGEASTALSRILSKYNFKNLDQVFPEGENTTTEFMCRAIHRDLAAHFCTNRAKSKEERFKGSICVKLWESHKAWACYEAIV 164
BLAST of jgi.p|Trimin1|177840 vs. uniprot
Match: A0A7S0FMK9_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FMK9_9STRA) HSP 1 Score: 159 bits (401), Expect = 2.690e-47 Identity = 85/136 (62.50%), Postives = 98/136 (72.06%), Query Frame = 1
Query: 7 VAQASAL-YTLGIRDSIMIAHSFKG-AEFGPAQQMHGATYTCDVEFCCPELTPSLNWVIDIGEASNMLSGVLAEYNFKNLNEVFPD-ENTTTEFMCRRIFDGVA---RACAGRFCGTIRVKLWESHKAWASYEGAV 396
+A A L +TLG+RDS+MIAHSF FGPA MHGATYTCDVEF L NWVIDIG+AS++L+ VL+ YN KNL+EVFP E TTTEFMC+ I DG+A R G F G IRVKLWESHKAWAS+ G V
Sbjct: 20 IAAAERLPFTLGVRDSLMIAHSFHNHPSFGPAGGMHGATYTCDVEFSSANLVEGTNWVIDIGKASDILADVLSRYNLKNLDEVFPGGEMTTTEFMCKTIHDGIAQRIREDVGDFKGEIRVKLWESHKAWASFVGEV 155
BLAST of jgi.p|Trimin1|177840 vs. uniprot
Match: A0A7S2R056_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R056_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.220e-46 Identity = 80/128 (62.50%), Postives = 95/128 (74.22%), Query Frame = 1
Query: 28 YTLGIRDSIMIAHSFKG-AEFGPAQQMHGATYTCDVEFCCPELTPSLNWVIDIGEASNMLSGVLAEYNFKNLNEVFPDEN-TTTEFMCRRIFDGVA---RACAGRFCGTIRVKLWESHKAWASYEGAV 396
+TLG+RDSIMIAHSF FGPA MHGATYTCDVEF C EL NWVIDIG+AS++LS +LA+YN KNL+E+F D+ TTTEFMCR I G+A R F G + VKLWESHKAWASY+ ++
Sbjct: 9 FTLGVRDSIMIAHSFHNHPSFGPAGGMHGATYTCDVEFACEELDSDANWVIDIGKASDILSEILAKYNLKNLDEIFGDDILTTTEFMCREICQGIAEKVREQVPDFHGDLCVKLWESHKAWASYQQSI 136
BLAST of jgi.p|Trimin1|177840 vs. uniprot
Match: A0A7S4K2E3_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K2E3_9STRA) HSP 1 Score: 157 bits (398), Expect = 3.510e-46 Identity = 82/128 (64.06%), Postives = 95/128 (74.22%), Query Frame = 1
Query: 28 YTLGIRDSIMIAHSFKG-AEFGPAQQMHGATYTCDVEFCCPELTPSLNWVIDIGEASNMLSGVLAEYNFKNLNEVFPD-ENTTTEFMCRRIFDGVARACAGR---FCGTIRVKLWESHKAWASYEGAV 396
+TLG+RDS+MIAHSF G FGPA MHGATYTCDVEF C +L NWVIDIG+AS +LS +L++YN KNL+EVF + E TTTEFMC+ I GVA+ F G I VKLWESHKAWASYEG V
Sbjct: 78 FTLGVRDSLMIAHSFHGHPAFGPAGGMHGATYTCDVEFRCKDLAQVTNWVIDIGKASEILSDILSKYNLKNLDEVFSNGEMTTTEFMCKVIHQGVAQRVREEVKDFKGEISVKLWESHKAWASYEGEV 205
BLAST of jgi.p|Trimin1|177840 vs. uniprot
Match: A0A448ZT77_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZT77_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.460e-45 Identity = 76/126 (60.32%), Postives = 93/126 (73.81%), Query Frame = 1
Query: 28 YTLGIRDSIMIAHSFKG-AEFGPAQQMHGATYTCDVEFCCPELTPSLNWVIDIGEASNMLSGVLAEYNFKNLNEVFPDEN-TTTEFMCRRIFDGVARAC---AGRFCGTIRVKLWESHKAWASYEG 390
++LG+RDS+MIAHSF G FGPA MHGATYTCDV+F EL P NWVIDIG+A ++LS VL+ YN KNL+EVFPD+ TTTEFMC++I D + F G +R+KLWESHKAWA+Y G
Sbjct: 35 FSLGVRDSLMIAHSFHGHPSFGPAGGMHGATYTCDVDFLAEELHPETNWVIDIGKALDILSKVLSRYNLKNLDEVFPDKTMTTTEFMCKQIHDDIRELLETECKEFKGAVRIKLWESHKAWATYTG 160 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|177840 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_13872 ID=mRNA_13872|Name=jgi.p|Trimin1|177840|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=420bp|location=Sequence derived from alignment at Contig_159:212832..214353- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCTGGTGGCGCAGGCCTCCGCTCTTTACACCCTGGGCATCAGGGACTCback to top protein sequence of jgi.p|Trimin1|177840 >Trimin1|177840|e_gw1.159.84.1 ID=Trimin1|177840|e_gw1.159.84.1|Name=jgi.p|Trimin1|177840|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=140bp MLVAQASALYTLGIRDSIMIAHSFKGAEFGPAQQMHGATYTCDVEFCCPEback to top mRNA from alignment at Contig_159:212832..214353- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_13872 ID=mRNA_13872|Name=jgi.p|Trimin1|177840|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1522bp|location=Sequence derived from alignment at Contig_159:212832..214353- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_159:212832..214353- >mRNA_13872 ID=mRNA_13872|Name=jgi.p|Trimin1|177840|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=420bp|location=Sequence derived from alignment at Contig_159:212832..214353- (Tribonema minus UTEX_B_3156 )back to top |