mRNA_137 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|157631 vs. uniprot
Match: A0A835YY42_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY42_9STRA) HSP 1 Score: 568 bits (1463), Expect = 1.490e-204 Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 1 Query: 1 MIRTRSSRNLSALRCEITQEDTSLLSVLSCRDSWKMIGAGSQGQVYEATWLGAPVAVKVTWDDGTAEAEAAAHERLRHPNIVALYCASPRMLIMELMRGSLSDFIRGSPEPTSSTKWKMVADVLRAVHYLDHAGAVHGDIKVDNVMVGHDALLKLGDFGSCRIDGAPSPEGSATAKFLPVTQWCKLSRTASEAASTDRYAVACVALCVMKWVDDPLEACGVEWAERTIMEAEDRDAVIGEVIRQATVGARAILSQMPHAAYHTLFSMFTAVDDQRSIGDALHSLV 855 MIRTRSSRNLSALRCEITQEDTSLLSVLSCRDSWKMIGAGSQGQVYEATWLGAPVAVKVTWDDGTAEAEAAAHERLRHPNIVALYCASPRMLIMELMRGSLSDFIRGSPEPTSSTKWKMVADVLRAVHYLDHAGAVHGDIKVDNVMVGHDALLKLGDFGSCRIDGAPSPEGSATAKFLPVTQWCKLSRTASEAASTDRYAVACVALCVMKWVDDPLEACGVEWAERTIMEAEDRDAVIGEVIRQATVGARAILSQMPHAAYHTLFSMFTAVDDQRSIGDALHSLV Sbjct: 1 MIRTRSSRNLSALRCEITQEDTSLLSVLSCRDSWKMIGAGSQGQVYEATWLGAPVAVKVTWDDGTAEAEAAAHERLRHPNIVALYCASPRMLIMELMRGSLSDFIRGSPEPTSSTKWKMVADVLRAVHYLDHAGAVHGDIKVDNVMVGHDALLKLGDFGSCRIDGAPSPEGSATAKFLPVTQWCKLSRTASEAASTDRYAVACVALCVMKWVDDPLEACGVEWAERTIMEAEDRDAVIGEVIRQATVGARAILSQMPHAAYHTLFSMFTAVDDQRSIGDALHSLV 285
BLAST of jgi.p|Trimin1|157631 vs. uniprot
Match: A0A835Z4V7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4V7_9STRA) HSP 1 Score: 253 bits (647), Expect = 9.640e-83 Identity = 124/127 (97.64%), Postives = 126/127 (99.21%), Query Frame = 1 Query: 109 IGAGSQGQVYEATWLGAPVAVKVTWDDGTAEAEAAAHERLRHPNIVALYCASPRMLIMELMRGSLSDFIRGSPEPTSSTKWKMVADVLRAVHYLDHAGAVHGDIKVDNVMVGHDALLKLGDFGSCRI 489 IGAGSQGQVYEATWLGAPVAVKVTWDDGTAEAEAAAHE LRHPNIVALYCASPRMLIMELMRGSLSDFIRGSPEPTS+TKWKMVADVLRAV+YLDHAGAVHGDIKVDNVMVGHDALLKLGDFGSCRI Sbjct: 1 IGAGSQGQVYEATWLGAPVAVKVTWDDGTAEAEAAAHESLRHPNIVALYCASPRMLIMELMRGSLSDFIRGSPEPTSTTKWKMVADVLRAVNYLDHAGAVHGDIKVDNVMVGHDALLKLGDFGSCRI 127
BLAST of jgi.p|Trimin1|157631 vs. uniprot
Match: A0A6A3LD09_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3LD09_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 4.460e-12 Identity = 49/145 (33.79%), Postives = 70/145 (48.28%), Query Frame = 1 Query: 97 SWKMIGAGSQGQVYEATWLGAPVA-----VKVTWDDGTAEAEAAAHERLRHPNIVALYCA----SPRMLIMELMRGSLSDFIRGSPEPTSSTKWKMVADVLRAVHYLDHAGAVHGDIKVDNVMVGHDALLKLGDFGSCRIDGAPS 504 S K G+G +VY TW APV +K+ D T E +LRHP+IV L+ A P + G LSD++R +P+ W + + + YL +HGDIK +N++VGHD KL DFG ++ S Sbjct: 430 SSKAFGSGGFAKVYHGTWRQAPVVLRRVRIKIENDLSTFLNEVKIWHKLRHPHIVQLFGACHIGQPFFVCEYAAGGELSDYLRVNPDEV----WNKLYEAALGLQYLHDKQVMHGDIKGNNILVGHDGSAKLSDFGFSTLESNDS 570
BLAST of jgi.p|Trimin1|157631 vs. uniprot
Match: UPI00192EA8A3 (serine/threonine-protein kinase EDR1 n=1 Tax=Eucalyptus grandis TaxID=71139 RepID=UPI00192EA8A3) HSP 1 Score: 75.1 bits (183), Expect = 7.100e-12 Identity = 54/148 (36.49%), Postives = 73/148 (49.32%), Query Frame = 1 Query: 103 KMIGAGSQGQVYEATWLGAPVAVKVTWDDGTAEAEAAAHERLRHPNIVALY--CASPRMLIMELM-RGSLSDFIRGSPEPTSST-KWKMVADVLRAVHYLDHAGA---VHGDIKVDNVMVGHDALLKLGDFGSCRIDGAPSPEGSATA 525 ++IG GS G+VY A+W G VAVK WD E LRHPN+V A P +IME + RGSL +I P + M D R ++YL H VH D+K N++V + +K+ DFGS + S +TA Sbjct: 72 ELIGQGSYGKVYHASWNGTDVAVKEFWDQDDFRQEVRIMRGLRHPNVVLFMGAVARPPSIIMEFLPRGSLDGYIHRPDCPIDEECRINMALDGARGMNYL-HTRVPTIVHRDLKSSNLLVDQNWNVKVCDFGSSHLMSDTSLSSKSTA 218
BLAST of jgi.p|Trimin1|157631 vs. uniprot
Match: A0A7S4MC87_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MC87_9EUKA) HSP 1 Score: 72.4 bits (176), Expect = 7.610e-11 Identity = 54/162 (33.33%), Postives = 81/162 (50.00%), Query Frame = 1 Query: 103 KMIGAGSQGQVYEATWLGAPVAVK-VTWDDGTAEA---EAAAHERLRHPNIVALYCASPRM----LIMELM-RGSLSDFIRGSPEP-TSSTKWKMVADVLRAVHYL--DHAGAVHGDIKVDNVMVGHDALLKLGDFGSCRIDGAPSPEGSATAKF-LPVTQW 549 +M+G G G+VY +W G VAVK VT + + E +LRHPNIVA YCA + +++E + RGSL + EP T + + K++ D+ R + YL +H D+K DNV++ K+ DFG R G A+ F + + W Sbjct: 84 RMLGRGFYGEVYLGSWHGIDVAVKKVTRPMESLQKWLLEIELLHQLRHPNIVAFYCACVQAPNYCIVLEYVARGSLEKVLTEPIEPITHAQRLKILCDIARGMKYLHSQKPPIIHRDLKSDNVLIDEQWSAKVSDFGLSRYKDETYSYGKASTPFDVTIAAW 245
BLAST of jgi.p|Trimin1|157631 vs. uniprot
Match: A0A6P5G093_ANACO (receptor-like protein kinase HSL1 n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5G093_ANACO) HSP 1 Score: 72.4 bits (176), Expect = 1.360e-10 Identity = 51/160 (31.87%), Postives = 79/160 (49.38%), Query Frame = 1 Query: 79 VLSCRDSWKMIGAGSQGQVYEATWL-GAPVAVKVTW----------DDGTAEAEAAAHERLRHPNIVALYCASP----RMLIMELM-RGSLSDFIRGSPEPTSS--TKWKMVADVLRAVHYLDH---AGAVHGDIKVDNVMVGHDALLKLGDFGSCRIDG 495 ++ C D +IG+G+ G+VY+A G VAVK W D+ EAE A ++RH NIV L+C ++L+ E M GSL D + S T++K+ D + YL H VH D+K +N+++ + K+ DFG ++ G Sbjct: 391 IMDCLDEDNVIGSGASGKVYKAVLSNGEAVAVKKLWGAPARKEYNNDNDGFEAEVATLGKIRHKNIVKLWCCCTHKECKLLVYEYMPNGSLGDLLHSSKGGLLDWPTRYKIALDAAEGLSYLHHDCVPAIVHRDVKSNNILLDGEFGAKVADFGVAKVVG 550
BLAST of jgi.p|Trimin1|157631 vs. uniprot
Match: A0A0D4DEB3_9ACTN (Non-specific serine/threonine protein kinase n=3 Tax=Streptomyces TaxID=1883 RepID=A0A0D4DEB3_9ACTN) HSP 1 Score: 72.0 bits (175), Expect = 1.560e-10 Identity = 59/195 (30.26%), Postives = 95/195 (48.72%), Query Frame = 1 Query: 103 KMIGAGSQGQVYEA--TWLGAPVAVKVTWDDGTAEAEAAAHER--------LRHPNIVALYCASPRM--------LIMELMRGS-LSDFIRGSPEPTSSTKWKMVADVLRAVHYLDHAGAVHGDIKVDNVMVGHDALLKLGDFGSCR---IDGAPSPEGSA---TAKFLPVTQWCKLSRTASEAASTDRYAVACV 612 +++G G +V+ A L VAVK D +A AAA R L HP+IVA+Y + ++ME + GS +D + G + + ++ A VL A+ + +G VH DIK NVM+ HD ++K+ DFG+ R + GAP + +A T ++L Q ++ + A D Y+ C+ Sbjct: 30 ELLGRGGTAEVHAAHDLRLDRGVAVKTLRSDLAGDASAAARFRREALSAASLNHPSIVAVYDTGEDLVGGVHVPYIVMERVDGSTFADLLHGGGRLSPTRALELTAGVLEALAHAHRSGVVHSDIKPANVMLSHDGVVKVTDFGTARRVDVQGAPLTQHTAVIGTPRYLSPEQ----AQGKAVGAPADLYSTGCL 220
BLAST of jgi.p|Trimin1|157631 vs. uniprot
Match: A0A7W1RXW3_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7W1RXW3_9BACT) HSP 1 Score: 71.6 bits (174), Expect = 1.680e-10 Identity = 51/156 (32.69%), Postives = 78/156 (50.00%), Query Frame = 1 Query: 94 DSWKMIGAGSQGQVYEATW--LGAPVAVKVTWDDGTAE--------AEAAAHERLRHPNIVALY--CASP--RMLIMELMRGSLSDFIRGSPEPTSSTKWKMVADVLRAVHYLDHAGAVHGDIKVDNVMVGHDALLKLGDFGSCRIDGAPSPEGSA 519 D ++G G G VY L PVAVK+ ++ E EA RL HPN+V ++ C + +LIMELMR S++D ++G+ M++D+ +A+ Y + VH D+K DN++V + KL D G I A + +G A Sbjct: 117 DLLSVLGRGRYGVVYRGLQVALNRPVAVKLLAEEYEKEPEKVQSFLTEARRAGRLNHPNLVQVHDVCEAEGRHLLIMELMRASMADHLKGNGPVPEDQALAMLSDIAKALSYAESQRLVHRDVKPDNILVNDEGSYKLADLG---IAAAIADDGQA 269
BLAST of jgi.p|Trimin1|157631 vs. uniprot
Match: A0A7S3HN74_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HN74_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 1.740e-10 Identity = 64/184 (34.78%), Postives = 88/184 (47.83%), Query Frame = 1 Query: 46 EITQEDTSLLSVLSCRDSWKMIGAGSQGQVYEATWLGAPVAVKVTWDDGTAEAEAAAHERL--------RHPNIVALYCASPRM--LIMELMR-GSL-------SDFIRGSPEPTSSTKWKMVADVLRAVHYLDHAGAVHGDIKVDNVMVGHDALLKLGDFGSCRIDG-APSPEGSATAKFLPV 540 ++TQ D V S + IG G+ G VY W VAVKV + AE AA E+ HPN+V L S M +MEL+ GSL +D + TS+TK K++ VL + L H G VHGD+K NV++ HD + K+ DFG R+ A S S+ + P+ Sbjct: 329 QLTQADVETAIV-----SREEIGRGAFGLVYRGVWQTQKVAVKVLFLTQLQRAEKAAFEKELIILGHLGTHPNLVQLLGYSIEMPAFVMELVALGSLHHSLYFNNDETVTAALSTSATKKKILIGVLSGLVQLHHVGIVHGDLKPHNVLLTHDFVAKITDFGLSRLRAKASSLTASSQEESAPI 507
BLAST of jgi.p|Trimin1|157631 vs. uniprot
Match: A0A7S2AHG7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7S2AHG7_9CHLO) HSP 1 Score: 69.3 bits (168), Expect = 2.240e-10 Identity = 52/145 (35.86%), Postives = 76/145 (52.41%), Query Frame = 1 Query: 109 IGAGSQGQVYEATWLGAPVAVKVTWD----DGTAEAEAAAHE-----RLRHPNIV----ALYCASPRMLIMELM-RGSLSDFI-RGSPEP-------TSSTKWKMVADVLRAVHYLDHAGAVHGDIKVDNVMVGHDALLKLGDFG 477 +G G G+V++A+WLG PVAVK +D D T + AHE RLRHP++V + S ++ME M RGSLS + R +P+ T + K V D++ + YL G VH D+ +NV++ K+ DFG Sbjct: 74 LGIGGYGEVFKASWLGTPVAVKRLFDHRGCDSTIDF---AHEVSLLSRLRHPHVVLWMGVIVEPSELSIVMEYMDRGSLSSVVHRRTPDGKTFANTLTVAMKMSWVHDIVEGMAYLHGRGIVHRDLTSNNVLLNKKGQAKITDFG 215 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157631 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_137 ID=mRNA_137|Name=jgi.p|Trimin1|157631|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=858bp|location=Sequence derived from alignment at Contig_3:558476..559333- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGATTCGCACTCGAAGCAGCCGCAACCTCTCTGCTTTGCGATGCGAGATback to top protein sequence of jgi.p|Trimin1|157631 >Trimin1|157631|e_gw1.3.42.1 ID=Trimin1|157631|e_gw1.3.42.1|Name=jgi.p|Trimin1|157631|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=286bp MIRTRSSRNLSALRCEITQEDTSLLSVLSCRDSWKMIGAGSQGQVYEATWback to top mRNA from alignment at Contig_3:558476..559333- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_137 ID=mRNA_137|Name=jgi.p|Trimin1|157631|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=858bp|location=Sequence derived from alignment at Contig_3:558476..559333- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_3:558476..559333- >mRNA_137 ID=mRNA_137|Name=jgi.p|Trimin1|157631|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=858bp|location=Sequence derived from alignment at Contig_3:558476..559333- (Tribonema minus UTEX_B_3156 )back to top |