mRNA_13651 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|175884 vs. uniprot
Match: A0A835ZJM3_9STRA (Homocysteine S-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJM3_9STRA) HSP 1 Score: 711 bits (1836), Expect = 3.890e-258 Identity = 382/382 (100.00%), Postives = 382/382 (100.00%), Query Frame = 1 Query: 1 MQTAEEATTCACPLRALVEKQGFAVLDGGLATELEALGADLTSKLWSATKLLDDPHLIKAVHRSYYEAGADVAITCSYQASFQGFASIGVDETRATELLQLSVRMAAEARDEFWSDHQRLTPATTTASDSCGTAPLPCRRRRLRPLVAASVGSYGAFLADGSEYKGNYGMTIEQLMDWHRPRLRALAATGADLVACETVPCLAEARALVLLLNEDDGTACYSCLYAWISVSCADGAHLASGEALAELAPAVAAADAGGRVAALGVNCTAPRHAEAAVRALRAAVAALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTGEAHRFGELAARWHAAGAAAVGGCCRVGPDAVAAVRAALEQQHGCGDDSD 1146 MQTAEEATTCACPLRALVEKQGFAVLDGGLATELEALGADLTSKLWSATKLLDDPHLIKAVHRSYYEAGADVAITCSYQASFQGFASIGVDETRATELLQLSVRMAAEARDEFWSDHQRLTPATTTASDSCGTAPLPCRRRRLRPLVAASVGSYGAFLADGSEYKGNYGMTIEQLMDWHRPRLRALAATGADLVACETVPCLAEARALVLLLNEDDGTACYSCLYAWISVSCADGAHLASGEALAELAPAVAAADAGGRVAALGVNCTAPRHAEAAVRALRAAVAALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTGEAHRFGELAARWHAAGAAAVGGCCRVGPDAVAAVRAALEQQHGCGDDSD Sbjct: 1 MQTAEEATTCACPLRALVEKQGFAVLDGGLATELEALGADLTSKLWSATKLLDDPHLIKAVHRSYYEAGADVAITCSYQASFQGFASIGVDETRATELLQLSVRMAAEARDEFWSDHQRLTPATTTASDSCGTAPLPCRRRRLRPLVAASVGSYGAFLADGSEYKGNYGMTIEQLMDWHRPRLRALAATGADLVACETVPCLAEARALVLLLNEDDGTACYSCLYAWISVSCADGAHLASGEALAELAPAVAAADAGGRVAALGVNCTAPRHAEAAVRALRAAVAALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTGEAHRFGELAARWHAAGAAAVGGCCRVGPDAVAAVRAALEQQHGCGDDSD 382
BLAST of jgi.p|Trimin1|175884 vs. uniprot
Match: A0A7C6ZX44_9CHLR (Homocysteine S-methyltransferase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C6ZX44_9CHLR) HSP 1 Score: 294 bits (753), Expect = 1.260e-94 Identity = 171/347 (49.28%), Postives = 213/347 (61.38%), Query Frame = 1 Query: 73 VLDGGLATELEALGADLTSKLWSATKLLDDPHLIKAVHRSYYEAGADVAITCSYQASFQGFASIGVDETRATELLQLSVRMAAEARDEFWSDHQRLTPATTTASDSCGTAPLPCRRRRLRPLVAASVGSYGAFLADGSEYKGNYGMTIEQLMDWHRPRLRALAATGADLVACETVPCLAEARALVLLLNEDDGTACYSCLYAWISVSCADGAHLASGEALAELAPAVAAADAGGRVAALGVNCTAPRHAEAAVRALRAAVAALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTGEAHRFGELAARWHAAGAAAVGGCCRVGPDAVAAVRAAL 1113 +LDG LATELE GADL LWSA L+D P LI+AVH Y AGADV IT SYQAS GF G++E + L +LSV++AAEA +E+ A P RR RPL+AAS+G YGA+LADGSEY+G+YG+++E LMDWHRPR+ ALA T ADL ACET+PCLAEA ALV LL E + + AW+S SC DGA L+SGE++A+ A ADA ++ A+GVNCT PR+ E + R +PL + YPN+GE+WDA AR WVEGTG A F E A RW+AAGA +GGCCR P +AA+ +L Sbjct: 16 ILDGALATELERRGADLRDALWSARLLIDAPELIRAVHLDYLRAGADVLITASYQASIDGFRQRGLNEAQVATLFRLSVQLAAEAVEEY-------------------LAAFPAARRLRRPLIAASIGPYGAYLADGSEYRGDYGLSVEALMDWHRPRMAALAQTEADLFACETIPCLAEAEALVRLLRE------FPYMPAWLSFSCRDGATLSSGESMAD---AARLADASDQIVAVGVNCTPPRYIETLLSEARCVTT---KPL--------------------LCYPNSGERWDATARCWVEGTGVAD-FAEPARRWYAAGARLIGGCCRTTPADIAAIAHSL 310
BLAST of jgi.p|Trimin1|175884 vs. uniprot
Match: A0A3A0ANC9_9CHLR (Homocysteine S-methyltransferase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3A0ANC9_9CHLR) HSP 1 Score: 291 bits (746), Expect = 1.920e-93 Identity = 174/360 (48.33%), Postives = 217/360 (60.28%), Query Frame = 1 Query: 37 PLRALVEKQGFAVLDGGLATELEALGADLTSKLWSATKLLDDPHLIKAVHRSYYEAGADVAITCSYQASFQGFASIGVDETRATELLQLSVRMAAEARDEFWSDHQRLTPATTTASDSCGTAPLPCRR-RRLRPLVAASVGSYGAFLADGSEYKGNYGMTIEQLMDWHRPRLRALAATGADLVACETVPCLAEARALVLLLNEDDGTACYSCLYAWISVSCADGAHLASGEALAELAPAVAAADAGGRVAALGVNCTAPRHAEAAVRALRAAVAALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTGEAHRFGELAARWHAAGAAAVGGCCRVGPDAVAAVRAAL 1113 PL + G VLDG LATELE GADL +LWSA+ L +DP LI+ VH Y+ AGADVA T SYQA+F GFA+ G+DE AT LL+ SV +A +AR FW+D P RR RLRPLVAAS+G YGA+LADGSEY+G+YG+T+ +L+D+HRPRL LA + ADL+ACET+P L EA ALV LL E T AW+S SC D AHL GE LAE A+A A+ +V A+GVNCTAPR E + ++R ++ ++ YPN+GE WDAA R W+ GT FGE A RW AAGA +GGCCR PD + ++ AL Sbjct: 12 PLAPFLADHGVMVLDGALATELERRGADLRDRLWSASLLTEDPDLIRQVHYDYFVAGADVATTASYQATFPGFAAKGLDEAAATRLLRRSVELADDARQAFWAD--------------------PARRVGRLRPLVAASIGPYGAYLADGSEYRGDYGLTVAELIDFHRPRLALLAESAADLLACETIPTLVEAEALVALLAEFPATP------AWLSFSCGDEAHLWHGEPLAE---ALALANECPQVVAVGVNCTAPRLIEPLLASVR-----------------------DLARKPLLVYPNSGEGWDAARRCWLPGTAVGD-FGEWARRWRAAGARLIGGCCRTTPDDIRSIARAL 318
BLAST of jgi.p|Trimin1|175884 vs. uniprot
Match: I0I4A8_CALAS (Homocysteine S-methyltransferase n=3 Tax=Caldilinea aerophila TaxID=133453 RepID=I0I4A8_CALAS) HSP 1 Score: 291 bits (745), Expect = 2.710e-93 Identity = 171/362 (47.24%), Postives = 222/362 (61.33%), Query Frame = 1 Query: 37 PLRALVEKQGFAVLDGGLATELEALGADLTSKLWSATKLLDDPHLIKAVHRSYYEAGADVAITCSYQASFQGFASIGVDETRATELLQLSVRMAAEARDEFWSDHQRLTPATTTASDSCGTAPLPCRRRRLRPLVAASVGSYGAFLADGSEYKGNYGMTIEQLMDWHRPRLRALAATGADLVACETVPCLAEARALVLLLNEDDGTACYSCLYAWISVSCADGAHLASGEALAELAPAVAAADAGGRVAALGVNCTAPRHAEAAVRALRAAVAALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTGEAHRFGELAARWHAAGAAAVGGCCRVGPDAVAAVRAALEQQ 1122 PL +E G ++DG LATELE GADL+ LWSA L+D P LI++VH Y AGADV IT SYQAS +GF G++E + L +LSV++AAEA +E+ ++ Q G A LP PL+AAS+G YGA+LADGSEY+G+YG+++E L+ WHRPR+ ALA T ADL ACET+PCLAEA AL+ LL E Y + AW+S SC DG L+SGE AE AV A+ ++ A+GVNCTAPR E+ ++ +A PL + ++ YPN+GE WDA AR WVEGTG F E A RW+AAGA +GGCCR P +AA+ AL ++ Sbjct: 4 PLTPFLEANGVIIIDGALATELERRGADLSDALWSARLLIDAPELIRSVHLDYLRAGADVLITASYQASIEGFKRRGLNEAQVRNLFRLSVQLAAEAIEEYLAETQ------------AGPARLP-------PLIAASIGPYGAYLADGSEYRGDYGLSVEALIAWHRPRVSALAETEADLFACETIPCLAEAEALIRLLEE------YPDMPAWLSFSCRDGESLSSGEPFAE---AVRLANRSEQIVAVGVNCTAPRFVESLLQ--------IARPLT---------------DKPLLCYPNSGEAWDAEARCWVEGTGVTD-FAEPARRWYAAGARLIGGCCRTTPADIAAMAQALRRE 313
BLAST of jgi.p|Trimin1|175884 vs. uniprot
Match: A0A3L7X8Q2_9CHLR (Homocysteine S-methyltransferase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3L7X8Q2_9CHLR) HSP 1 Score: 285 bits (730), Expect = 4.510e-91 Identity = 169/360 (46.94%), Postives = 219/360 (60.83%), Query Frame = 1 Query: 37 PLRALVEKQGFAVLDGGLATELEALGADLTSKLWSATKLLDDPHLIKAVHRSYYEAGADVAITCSYQASFQGFASIGVDETRATELLQLSVRMAAEARDEFWSDHQRLTPATTTASDSCGTAPLPCRRRRLRPLVAASVGSYGAFLADGSEYKGNYGMTIEQLMDWHRPRLRALAATGADLVACETVPCLAEARALVLLLNEDDGTACYSCLYAWISVSCADGAHLASGEALAELAPAVAAADAGGRVAALGVNCTAPRHAEAAVRALRAAVAALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTGEAHRFGELAARWHAAGAAAVGGCCRVGPDAVAAVRAALE 1116 PL + +QG+AVLDGGLATELE GA+++ LWSA LLD P +I+ +H Y+ AGAD+AI+ SYQASF GFA G+ +T AT L+ LSV +A ARD+FW+D PA R RLRPLVAAS+G YGAFLADGSEY+G+YG++ ++LMDWHRPR+ AL A+ DL+ACET+PC EA AL++LL E T AWIS S A+ + + GE A+ +A + +V A+GVNCT PR E+ L AA +PL + YPN+GE WDA++R WV G+G FG A W AGA +GGCCR GPD + +R AL+ Sbjct: 6 PLTPFLTQQGYAVLDGGLATELETRGANISDALWSARLLLDAPAMIRQLHYDYFAAGADIAISASYQASFPGFARRGLGQTEATRLMALSVELAQVARDDFWAD-----PAN--------------RVGRLRPLVAASIGCYGAFLADGSEYRGDYGLSKQELMDWHRPRMAALVASSPDLLACETIPCQLEAEALMMLLAEFPQTP------AWISFSGANESQVCHGEEFADCVAVIATSP---QVVAVGVNCTPPRFVESL---LCAAQRVTDKPL--------------------LCYPNSGEGWDASSRCWVTGSGVTD-FGPPALLWRDAGAQMLGGCCRTGPDDIHRIRTALQ 313
BLAST of jgi.p|Trimin1|175884 vs. uniprot
Match: A0A540V9S1_9CHLR (Homocysteine S-methyltransferase n=1 Tax=Litorilinea aerophila TaxID=1204385 RepID=A0A540V9S1_9CHLR) HSP 1 Score: 285 bits (728), Expect = 8.460e-91 Identity = 171/357 (47.90%), Postives = 213/357 (59.66%), Query Frame = 1 Query: 52 VEKQGFAVLDGGLATELEALGADLTSKLWSATKLLDDPHLIKAVHRSYYEAGADVAITCSYQASFQGFASIGVDETRATELLQLSVRMAAEARDEFWSDHQRLTPATTTASDSCGTAPLPCRRRRLRPLVAASVGSYGAFLADGSEYKGNYGMTIEQLMDWHRPRLRALAATGADLVACETVPCLAEARALVLLLNEDDGTACYSCLYAWISVSCADGAHLASGEALAELAPAVAAADAGGRVAALGVNCTAPRHAEAAVRALRAAVAALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTGEAHRFGELAARWHAAGAAAVGGCCRVGPDAVAAVRAALEQQ 1122 +++ G +LDG LATELE GA+L LWSA LL+ P LI+ VH Y+ AGADVAIT SYQA+F+GFA G+ +A ELL LSVR+A EARD FW+D PA R+ R+RPLVAAS+G YGA+LADGSEY+G+YG+++E LMD+HRPR+ LAA+GADL+ACET+PC AE ALV LL E + AW+S SC D H+ GE A V A +V A+G+NCT PRH EA LR AV PL +AYPN+GE WDA WV G+GE F A RW+AAGA +GGCCR P + A+ L + Sbjct: 10 LQEAGVVILDGALATELERRGANLDDPLWSARILLEAPELIRQVHYDYFCAGADVAITASYQATFEGFARRGLSREQAEELLLLSVRLAQEARDLFWAD-----PAN--------------RQGRIRPLVAASIGPYGAYLADGSEYRGDYGLSVEALMDFHRPRMAVLAASGADLLACETIPCQAEGEALVRLLAE------FPQAVAWLSFSCCDDLHVCHGEPFARC---VRLASRSEQVIAVGLNCTPPRHVEAL---LRHAVGVTDRPL--------------------VAYPNSGETWDAEHHCWVAGSGETD-FRTPALRWYAAGARLIGGCCRTTPADIQAMAQVLRHR 314
BLAST of jgi.p|Trimin1|175884 vs. uniprot
Match: A0A1H0VNJ6_9BURK (Homocysteine S-methyltransferase n=2 Tax=Rhodoferax sp. OV413 TaxID=1855285 RepID=A0A1H0VNJ6_9BURK) HSP 1 Score: 285 bits (729), Expect = 1.070e-90 Identity = 166/356 (46.63%), Postives = 210/356 (58.99%), Query Frame = 1 Query: 37 PLRALVEKQGFAVLDGGLATELEALGADLTSKLWSATKLLDDPHLIKAVHRSYYEAGADVAITCSYQASFQGFASIGVDETRATELLQLSVRMAAEARDEFWSDHQRLTPATTTASDSCGTAPLPCRRRRLRPLVAASVGSYGAFLADGSEYKGNYGMTIEQLMDWHRPRLRALAATGADLVACETVPCLAEARALVLLLNEDDGTACYSCLYAWISVSCADGAHLASGEALAELAPAVAAADAGGRVAALGVNCTAPRHAEAAVRALRAAVAALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTGEAHRFGELAARWHAAGAAAVGGCCRVGPDAVAAVR 1104 PL ++ +LDG LATELE GADL LWSA L++ P LI+ VH Y+ AGADVA T SYQA+F+ FA G D + +L++ SVR+A EARD FW+D PA R R +P++AASVG YGA LADGSEY+G+YG++ E LMD+HRPRL+ L +GADL+ACET+PCLAEARA+ LL E G A AWIS SC DG H + GE LA+ A+ D +V A+GVNCTAP H + V + A ++ ++ YPN+GE +DAA + W G A F E A WHA GA +GGCCR GPD +AAVR Sbjct: 18 PLDNFFAQRPLVILDGALATELERRGADLNDPLWSAKLLIERPELIRQVHLDYFTAGADVATTSSYQATFEAFAKRGFDHAASAQLMRDSVRLAVEARDAFWAD-----PAQ--------------RAGRKQPIIAASVGPYGAMLADGSEYRGHYGLSEEALMDFHRPRLQVLVESGADLLACETIPCLAEARAIARLLPEFPGAA------AWISFSCRDGLHTSQGELLADCVAALEGFD---QVVAVGVNCTAPEHIASLVDQMHA-----------------------HTRKPILVYPNSGEHYDAAHKQW-HGNPSASHFAEQARGWHARGARLIGGCCRTGPDDIAAVR 321
BLAST of jgi.p|Trimin1|175884 vs. uniprot
Match: A0A3M1EAV5_9CHLR (Homocysteine S-methyltransferase n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1EAV5_9CHLR) HSP 1 Score: 284 bits (727), Expect = 1.200e-90 Identity = 168/359 (46.80%), Postives = 213/359 (59.33%), Query Frame = 1 Query: 37 PLRALVEKQGFAVLDGGLATELEALGADLTSKLWSATKLLDDPHLIKAVHRSYYEAGADVAITCSYQASFQGFASIGVDETRATELLQLSVRMAAEARDEFWSDHQRLTPATTTASDSCGTAPLPCRRRRLRPLVAASVGSYGAFLADGSEYKGNYGMTIEQLMDWHRPRLRALAATGADLVACETVPCLAEARALVLLLNEDDGTACYSCLYAWISVSCADGAHLASGEALAELAPAVAAADAGGRVAALGVNCTAPRHAEAAVRALRAAVAALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTGEAHRFGELAARWHAAGAAAVGGCCRVGPDAVAAVRAAL 1113 P+ ++++ G VLDG LATELE G DL LWSA LL+ P LIKAVHR Y+ AGAD AIT SYQA+F+GFA G+ E A +L++LSVR+A EARDEFW+D PA R R RP+VAAS+GSYGA+LADGSEY+G+YG+T +LMD+HRPRL LA T ADL A ET+PCL EA+AL LL + + +AW+S S D AH GE +AE A A D ++ A+G+NCT P + A VRA+RAA + +I YPN+GE +D +R W G H +G+ A W GA +GGCCR PD + V AAL Sbjct: 3 PIASILQSHGVMVLDGALATELERRGCDLNDPLWSAKVLLEQPELIKAVHRDYFAAGADCAITASYQATFEGFARRGLSEAEAADLMRLSVRLAVEARDEFWAD-----PAH--------------RAGRPRPIVAASIGSYGAYLADGSEYRGDYGLTEAELMDFHRPRLAVLAETEADLFAFETIPCLLEAQALTRLLAAE-----FPNRFAWVSFSARDEAHTCHGEPVAECA---AWLDGYTQIVAVGINCTPPPYIPALVRAMRAATG-----------------------KPIIVYPNSGEAYDVQSRRW-HGPAAHHTYGQQAQTWRRCGAQIIGGCCRTTPDDIRQVAAAL 310
BLAST of jgi.p|Trimin1|175884 vs. uniprot
Match: A0A426TV77_9CHLR (Homocysteine S-methyltransferase n=1 Tax=Candidatus Viridilinea halotolerans TaxID=2491704 RepID=A0A426TV77_9CHLR) HSP 1 Score: 283 bits (725), Expect = 2.040e-90 Identity = 161/356 (45.22%), Postives = 215/356 (60.39%), Query Frame = 1 Query: 37 PLRALVEKQGFAVLDGGLATELEALGADLTSKLWSATKLLDDPHLIKAVHRSYYEAGADVAITCSYQASFQGFASIGVDETRATELLQLSVRMAAEARDEFWSDHQRLTPATTTASDSCGTAPLPCRRRRLRPLVAASVGSYGAFLADGSEYKGNYGMTIEQLMDWHRPRLRALAATGADLVACETVPCLAEARALVLLLNEDDGTACYSCLYAWISVSCADGAHLASGEALAELAPAVAAADAGGRVAALGVNCTAPRHAEAAVRALRAAVAALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTGEAHRFGELAARWHAAGAAAVGGCCRVGPDAVAAVR 1104 P+ A++++Q +LDG LATELE G DL LWSA LL++P LI+ +H Y+ AGADVAIT SYQA+F GFA+ G+D ++A +L++L+V++A EARD+FW+D + R R+RPLVAASVG YGAFL DGSEY+G+YG++I+ LM +HRPR+ LA GADL+ACET+PCLAEA+AL LL E T YAW S S +G ++ GE +A A AA D ++ ALG+NCT P H A +RA +A + + ++ YPN+GE WD A+ W G F A WHAAGA +GGCCR P +AA+R Sbjct: 3 PITAILQQQPLIILDGALATELERRGCDLRDPLWSAKVLLENPALIRQIHADYFAAGADVAITASYQATFAGFAARGLDASQAADLMRLAVQLAIEARDKFWADPRN-------------------RVGRVRPLVAASVGPYGAFLHDGSEYRGDYGLSIDDLMAFHRPRMALLATAGADLLACETLPCLAEAQALATLLREFPTT------YAWFSFSARNGTEISHGEPIAACA---AAFDDHPQLVALGINCTPPAHIAALIRAAHSATS-----------------------KPIVVYPNSGEAWDGASATW-SGVATCDDFALQAGAWHAAGAQLIGGCCRTTPQHIAAMR 306
BLAST of jgi.p|Trimin1|175884 vs. uniprot
Match: A0A3A0A3P9_9CHLR (Homocysteine S-methyltransferase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3A0A3P9_9CHLR) HSP 1 Score: 284 bits (726), Expect = 2.660e-90 Identity = 168/360 (46.67%), Postives = 216/360 (60.00%), Query Frame = 1 Query: 37 PLRALVEKQGFAVLDGGLATELEALGADLTSKLWSATKLLDDPHLIKAVHRSYYEAGADVAITCSYQASFQGFASIGVDETRATELLQLSVRMAAEARDEFWSDHQRLTPATTTASDSCGTAPLPCRRRRLRPLVAASVGSYGAFLADGSEYKGNYGMTIEQLMDWHRPRLRALAATGADLVACETVPCLAEARALVLLLNEDDGTACYSCLYAWISVSCADGAHLASGEALAELAPAVAAADAGGRVAALGVNCTAPRHAEAAVRALRAAVAALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTGEAHRFGELAARWHAAGAAAVGGCCRVGPDAVAAVRAALE 1116 PL+ L++ QG +LDG LATELE GADL LWSA LL+ P LI+ +H YY AGADVA T SYQA+F G A G+ +A +L++LSVR+A EAR++ D + T A T + P L LVA S+G YGA+LADGSEY+G+YG+++E+LMD+HRPRL LA +GADL+ACET+PCLAE ALV LL E T AW+S SC D H GE A+ VA A+ ++ A+G+NCT PR+ EA LR+A +PL +AYPN+GE+WDAA WV G G F E A RW AAGA +GGCCR GP+ + + L+ Sbjct: 4 PLQPLLDAQGVVILDGALATELERRGADLNDPLWSAKLLLEAPALIRQLHYDYYAAGADVATTASYQATFAGLARRGLSHEQAADLMRLSVRLACEAREQIIRDWRSETGAATLNNRHSS----PFTHHSL--LVAVSIGPYGAYLADGSEYRGDYGLSVEELMDFHRPRLAVLAESGADLLACETIPCLAEGEALVRLLAEFPDTP------AWLSFSCCDETHTCHGERFADC---VALANESEQIVAVGLNCTPPRYVEAL---LRSAARVTDKPL--------------------LAYPNSGEEWDAANHCWVAGAGTTD-FAEPARRWFAAGARLIGGCCRTGPEDIRVIAQVLK 324 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|175884 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_13651 ID=mRNA_13651|Name=jgi.p|Trimin1|175884|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1149bp|location=Sequence derived from alignment at Contig_131:413272..414884+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCAGACCGCTGAGGAAGCAACTACTTGTGCCTGTCCTCTTCGCGCATTback to top protein sequence of jgi.p|Trimin1|175884 >Trimin1|175884|e_gw1.131.75.1 ID=Trimin1|175884|e_gw1.131.75.1|Name=jgi.p|Trimin1|175884|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=383bp MQTAEEATTCACPLRALVEKQGFAVLDGGLATELEALGADLTSKLWSATKback to top mRNA from alignment at Contig_131:413272..414884+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_13651 ID=mRNA_13651|Name=jgi.p|Trimin1|175884|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1613bp|location=Sequence derived from alignment at Contig_131:413272..414884+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_131:413272..414884+ >mRNA_13651 ID=mRNA_13651|Name=jgi.p|Trimin1|175884|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1149bp|location=Sequence derived from alignment at Contig_131:413272..414884+ (Tribonema minus UTEX_B_3156 )back to top |