mRNA_13651 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|175884
Unique NamemRNA_13651
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|175884 vs. uniprot
Match: A0A835ZJM3_9STRA (Homocysteine S-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJM3_9STRA)

HSP 1 Score: 711 bits (1836), Expect = 3.890e-258
Identity = 382/382 (100.00%), Postives = 382/382 (100.00%), Query Frame = 1
Query:    1 MQTAEEATTCACPLRALVEKQGFAVLDGGLATELEALGADLTSKLWSATKLLDDPHLIKAVHRSYYEAGADVAITCSYQASFQGFASIGVDETRATELLQLSVRMAAEARDEFWSDHQRLTPATTTASDSCGTAPLPCRRRRLRPLVAASVGSYGAFLADGSEYKGNYGMTIEQLMDWHRPRLRALAATGADLVACETVPCLAEARALVLLLNEDDGTACYSCLYAWISVSCADGAHLASGEALAELAPAVAAADAGGRVAALGVNCTAPRHAEAAVRALRAAVAALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTGEAHRFGELAARWHAAGAAAVGGCCRVGPDAVAAVRAALEQQHGCGDDSD 1146
            MQTAEEATTCACPLRALVEKQGFAVLDGGLATELEALGADLTSKLWSATKLLDDPHLIKAVHRSYYEAGADVAITCSYQASFQGFASIGVDETRATELLQLSVRMAAEARDEFWSDHQRLTPATTTASDSCGTAPLPCRRRRLRPLVAASVGSYGAFLADGSEYKGNYGMTIEQLMDWHRPRLRALAATGADLVACETVPCLAEARALVLLLNEDDGTACYSCLYAWISVSCADGAHLASGEALAELAPAVAAADAGGRVAALGVNCTAPRHAEAAVRALRAAVAALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTGEAHRFGELAARWHAAGAAAVGGCCRVGPDAVAAVRAALEQQHGCGDDSD
Sbjct:    1 MQTAEEATTCACPLRALVEKQGFAVLDGGLATELEALGADLTSKLWSATKLLDDPHLIKAVHRSYYEAGADVAITCSYQASFQGFASIGVDETRATELLQLSVRMAAEARDEFWSDHQRLTPATTTASDSCGTAPLPCRRRRLRPLVAASVGSYGAFLADGSEYKGNYGMTIEQLMDWHRPRLRALAATGADLVACETVPCLAEARALVLLLNEDDGTACYSCLYAWISVSCADGAHLASGEALAELAPAVAAADAGGRVAALGVNCTAPRHAEAAVRALRAAVAALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTGEAHRFGELAARWHAAGAAAVGGCCRVGPDAVAAVRAALEQQHGCGDDSD 382          
BLAST of jgi.p|Trimin1|175884 vs. uniprot
Match: A0A7C6ZX44_9CHLR (Homocysteine S-methyltransferase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C6ZX44_9CHLR)

HSP 1 Score: 294 bits (753), Expect = 1.260e-94
Identity = 171/347 (49.28%), Postives = 213/347 (61.38%), Query Frame = 1
Query:   73 VLDGGLATELEALGADLTSKLWSATKLLDDPHLIKAVHRSYYEAGADVAITCSYQASFQGFASIGVDETRATELLQLSVRMAAEARDEFWSDHQRLTPATTTASDSCGTAPLPCRRRRLRPLVAASVGSYGAFLADGSEYKGNYGMTIEQLMDWHRPRLRALAATGADLVACETVPCLAEARALVLLLNEDDGTACYSCLYAWISVSCADGAHLASGEALAELAPAVAAADAGGRVAALGVNCTAPRHAEAAVRALRAAVAALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTGEAHRFGELAARWHAAGAAAVGGCCRVGPDAVAAVRAAL 1113
            +LDG LATELE  GADL   LWSA  L+D P LI+AVH  Y  AGADV IT SYQAS  GF   G++E +   L +LSV++AAEA +E+                    A  P  RR  RPL+AAS+G YGA+LADGSEY+G+YG+++E LMDWHRPR+ ALA T ADL ACET+PCLAEA ALV LL E      +  + AW+S SC DGA L+SGE++A+   A   ADA  ++ A+GVNCT PR+ E  +   R       +PL                    + YPN+GE+WDA AR WVEGTG A  F E A RW+AAGA  +GGCCR  P  +AA+  +L
Sbjct:   16 ILDGALATELERRGADLRDALWSARLLIDAPELIRAVHLDYLRAGADVLITASYQASIDGFRQRGLNEAQVATLFRLSVQLAAEAVEEY-------------------LAAFPAARRLRRPLIAASIGPYGAYLADGSEYRGDYGLSVEALMDWHRPRMAALAQTEADLFACETIPCLAEAEALVRLLRE------FPYMPAWLSFSCRDGATLSSGESMAD---AARLADASDQIVAVGVNCTPPRYIETLLSEARCVTT---KPL--------------------LCYPNSGERWDATARCWVEGTGVAD-FAEPARRWYAAGARLIGGCCRTTPADIAAIAHSL 310          
BLAST of jgi.p|Trimin1|175884 vs. uniprot
Match: A0A3A0ANC9_9CHLR (Homocysteine S-methyltransferase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3A0ANC9_9CHLR)

HSP 1 Score: 291 bits (746), Expect = 1.920e-93
Identity = 174/360 (48.33%), Postives = 217/360 (60.28%), Query Frame = 1
Query:   37 PLRALVEKQGFAVLDGGLATELEALGADLTSKLWSATKLLDDPHLIKAVHRSYYEAGADVAITCSYQASFQGFASIGVDETRATELLQLSVRMAAEARDEFWSDHQRLTPATTTASDSCGTAPLPCRR-RRLRPLVAASVGSYGAFLADGSEYKGNYGMTIEQLMDWHRPRLRALAATGADLVACETVPCLAEARALVLLLNEDDGTACYSCLYAWISVSCADGAHLASGEALAELAPAVAAADAGGRVAALGVNCTAPRHAEAAVRALRAAVAALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTGEAHRFGELAARWHAAGAAAVGGCCRVGPDAVAAVRAAL 1113
            PL   +   G  VLDG LATELE  GADL  +LWSA+ L +DP LI+ VH  Y+ AGADVA T SYQA+F GFA+ G+DE  AT LL+ SV +A +AR  FW+D                    P RR  RLRPLVAAS+G YGA+LADGSEY+G+YG+T+ +L+D+HRPRL  LA + ADL+ACET+P L EA ALV LL E   T       AW+S SC D AHL  GE LAE   A+A A+   +V A+GVNCTAPR  E  + ++R                          ++ ++ YPN+GE WDAA R W+ GT     FGE A RW AAGA  +GGCCR  PD + ++  AL
Sbjct:   12 PLAPFLADHGVMVLDGALATELERRGADLRDRLWSASLLTEDPDLIRQVHYDYFVAGADVATTASYQATFPGFAAKGLDEAAATRLLRRSVELADDARQAFWAD--------------------PARRVGRLRPLVAASIGPYGAYLADGSEYRGDYGLTVAELIDFHRPRLALLAESAADLLACETIPTLVEAEALVALLAEFPATP------AWLSFSCGDEAHLWHGEPLAE---ALALANECPQVVAVGVNCTAPRLIEPLLASVR-----------------------DLARKPLLVYPNSGEGWDAARRCWLPGTAVGD-FGEWARRWRAAGARLIGGCCRTTPDDIRSIARAL 318          
BLAST of jgi.p|Trimin1|175884 vs. uniprot
Match: I0I4A8_CALAS (Homocysteine S-methyltransferase n=3 Tax=Caldilinea aerophila TaxID=133453 RepID=I0I4A8_CALAS)

HSP 1 Score: 291 bits (745), Expect = 2.710e-93
Identity = 171/362 (47.24%), Postives = 222/362 (61.33%), Query Frame = 1
Query:   37 PLRALVEKQGFAVLDGGLATELEALGADLTSKLWSATKLLDDPHLIKAVHRSYYEAGADVAITCSYQASFQGFASIGVDETRATELLQLSVRMAAEARDEFWSDHQRLTPATTTASDSCGTAPLPCRRRRLRPLVAASVGSYGAFLADGSEYKGNYGMTIEQLMDWHRPRLRALAATGADLVACETVPCLAEARALVLLLNEDDGTACYSCLYAWISVSCADGAHLASGEALAELAPAVAAADAGGRVAALGVNCTAPRHAEAAVRALRAAVAALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTGEAHRFGELAARWHAAGAAAVGGCCRVGPDAVAAVRAALEQQ 1122
            PL   +E  G  ++DG LATELE  GADL+  LWSA  L+D P LI++VH  Y  AGADV IT SYQAS +GF   G++E +   L +LSV++AAEA +E+ ++ Q             G A LP       PL+AAS+G YGA+LADGSEY+G+YG+++E L+ WHRPR+ ALA T ADL ACET+PCLAEA AL+ LL E      Y  + AW+S SC DG  L+SGE  AE   AV  A+   ++ A+GVNCTAPR  E+ ++        +A PL                 + ++ YPN+GE WDA AR WVEGTG    F E A RW+AAGA  +GGCCR  P  +AA+  AL ++
Sbjct:    4 PLTPFLEANGVIIIDGALATELERRGADLSDALWSARLLIDAPELIRSVHLDYLRAGADVLITASYQASIEGFKRRGLNEAQVRNLFRLSVQLAAEAIEEYLAETQ------------AGPARLP-------PLIAASIGPYGAYLADGSEYRGDYGLSVEALIAWHRPRVSALAETEADLFACETIPCLAEAEALIRLLEE------YPDMPAWLSFSCRDGESLSSGEPFAE---AVRLANRSEQIVAVGVNCTAPRFVESLLQ--------IARPLT---------------DKPLLCYPNSGEAWDAEARCWVEGTGVTD-FAEPARRWYAAGARLIGGCCRTTPADIAAMAQALRRE 313          
BLAST of jgi.p|Trimin1|175884 vs. uniprot
Match: A0A3L7X8Q2_9CHLR (Homocysteine S-methyltransferase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3L7X8Q2_9CHLR)

HSP 1 Score: 285 bits (730), Expect = 4.510e-91
Identity = 169/360 (46.94%), Postives = 219/360 (60.83%), Query Frame = 1
Query:   37 PLRALVEKQGFAVLDGGLATELEALGADLTSKLWSATKLLDDPHLIKAVHRSYYEAGADVAITCSYQASFQGFASIGVDETRATELLQLSVRMAAEARDEFWSDHQRLTPATTTASDSCGTAPLPCRRRRLRPLVAASVGSYGAFLADGSEYKGNYGMTIEQLMDWHRPRLRALAATGADLVACETVPCLAEARALVLLLNEDDGTACYSCLYAWISVSCADGAHLASGEALAELAPAVAAADAGGRVAALGVNCTAPRHAEAAVRALRAAVAALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTGEAHRFGELAARWHAAGAAAVGGCCRVGPDAVAAVRAALE 1116
            PL   + +QG+AVLDGGLATELE  GA+++  LWSA  LLD P +I+ +H  Y+ AGAD+AI+ SYQASF GFA  G+ +T AT L+ LSV +A  ARD+FW+D     PA               R  RLRPLVAAS+G YGAFLADGSEY+G+YG++ ++LMDWHRPR+ AL A+  DL+ACET+PC  EA AL++LL E   T       AWIS S A+ + +  GE  A+    +A +    +V A+GVNCT PR  E+    L AA     +PL                    + YPN+GE WDA++R WV G+G    FG  A  W  AGA  +GGCCR GPD +  +R AL+
Sbjct:    6 PLTPFLTQQGYAVLDGGLATELETRGANISDALWSARLLLDAPAMIRQLHYDYFAAGADIAISASYQASFPGFARRGLGQTEATRLMALSVELAQVARDDFWAD-----PAN--------------RVGRLRPLVAASIGCYGAFLADGSEYRGDYGLSKQELMDWHRPRMAALVASSPDLLACETIPCQLEAEALMMLLAEFPQTP------AWISFSGANESQVCHGEEFADCVAVIATSP---QVVAVGVNCTPPRFVESL---LCAAQRVTDKPL--------------------LCYPNSGEGWDASSRCWVTGSGVTD-FGPPALLWRDAGAQMLGGCCRTGPDDIHRIRTALQ 313          
BLAST of jgi.p|Trimin1|175884 vs. uniprot
Match: A0A540V9S1_9CHLR (Homocysteine S-methyltransferase n=1 Tax=Litorilinea aerophila TaxID=1204385 RepID=A0A540V9S1_9CHLR)

HSP 1 Score: 285 bits (728), Expect = 8.460e-91
Identity = 171/357 (47.90%), Postives = 213/357 (59.66%), Query Frame = 1
Query:   52 VEKQGFAVLDGGLATELEALGADLTSKLWSATKLLDDPHLIKAVHRSYYEAGADVAITCSYQASFQGFASIGVDETRATELLQLSVRMAAEARDEFWSDHQRLTPATTTASDSCGTAPLPCRRRRLRPLVAASVGSYGAFLADGSEYKGNYGMTIEQLMDWHRPRLRALAATGADLVACETVPCLAEARALVLLLNEDDGTACYSCLYAWISVSCADGAHLASGEALAELAPAVAAADAGGRVAALGVNCTAPRHAEAAVRALRAAVAALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTGEAHRFGELAARWHAAGAAAVGGCCRVGPDAVAAVRAALEQQ 1122
            +++ G  +LDG LATELE  GA+L   LWSA  LL+ P LI+ VH  Y+ AGADVAIT SYQA+F+GFA  G+   +A ELL LSVR+A EARD FW+D     PA               R+ R+RPLVAAS+G YGA+LADGSEY+G+YG+++E LMD+HRPR+  LAA+GADL+ACET+PC AE  ALV LL E      +    AW+S SC D  H+  GE  A     V  A    +V A+G+NCT PRH EA    LR AV     PL                    +AYPN+GE WDA    WV G+GE   F   A RW+AAGA  +GGCCR  P  + A+   L  +
Sbjct:   10 LQEAGVVILDGALATELERRGANLDDPLWSARILLEAPELIRQVHYDYFCAGADVAITASYQATFEGFARRGLSREQAEELLLLSVRLAQEARDLFWAD-----PAN--------------RQGRIRPLVAASIGPYGAYLADGSEYRGDYGLSVEALMDFHRPRMAVLAASGADLLACETIPCQAEGEALVRLLAE------FPQAVAWLSFSCCDDLHVCHGEPFARC---VRLASRSEQVIAVGLNCTPPRHVEAL---LRHAVGVTDRPL--------------------VAYPNSGETWDAEHHCWVAGSGETD-FRTPALRWYAAGARLIGGCCRTTPADIQAMAQVLRHR 314          
BLAST of jgi.p|Trimin1|175884 vs. uniprot
Match: A0A1H0VNJ6_9BURK (Homocysteine S-methyltransferase n=2 Tax=Rhodoferax sp. OV413 TaxID=1855285 RepID=A0A1H0VNJ6_9BURK)

HSP 1 Score: 285 bits (729), Expect = 1.070e-90
Identity = 166/356 (46.63%), Postives = 210/356 (58.99%), Query Frame = 1
Query:   37 PLRALVEKQGFAVLDGGLATELEALGADLTSKLWSATKLLDDPHLIKAVHRSYYEAGADVAITCSYQASFQGFASIGVDETRATELLQLSVRMAAEARDEFWSDHQRLTPATTTASDSCGTAPLPCRRRRLRPLVAASVGSYGAFLADGSEYKGNYGMTIEQLMDWHRPRLRALAATGADLVACETVPCLAEARALVLLLNEDDGTACYSCLYAWISVSCADGAHLASGEALAELAPAVAAADAGGRVAALGVNCTAPRHAEAAVRALRAAVAALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTGEAHRFGELAARWHAAGAAAVGGCCRVGPDAVAAVR 1104
            PL     ++   +LDG LATELE  GADL   LWSA  L++ P LI+ VH  Y+ AGADVA T SYQA+F+ FA  G D   + +L++ SVR+A EARD FW+D     PA               R  R +P++AASVG YGA LADGSEY+G+YG++ E LMD+HRPRL+ L  +GADL+ACET+PCLAEARA+  LL E  G A      AWIS SC DG H + GE LA+   A+   D   +V A+GVNCTAP H  + V  + A                         ++ ++ YPN+GE +DAA + W  G   A  F E A  WHA GA  +GGCCR GPD +AAVR
Sbjct:   18 PLDNFFAQRPLVILDGALATELERRGADLNDPLWSAKLLIERPELIRQVHLDYFTAGADVATTSSYQATFEAFAKRGFDHAASAQLMRDSVRLAVEARDAFWAD-----PAQ--------------RAGRKQPIIAASVGPYGAMLADGSEYRGHYGLSEEALMDFHRPRLQVLVESGADLLACETIPCLAEARAIARLLPEFPGAA------AWISFSCRDGLHTSQGELLADCVAALEGFD---QVVAVGVNCTAPEHIASLVDQMHA-----------------------HTRKPILVYPNSGEHYDAAHKQW-HGNPSASHFAEQARGWHARGARLIGGCCRTGPDDIAAVR 321          
BLAST of jgi.p|Trimin1|175884 vs. uniprot
Match: A0A3M1EAV5_9CHLR (Homocysteine S-methyltransferase n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1EAV5_9CHLR)

HSP 1 Score: 284 bits (727), Expect = 1.200e-90
Identity = 168/359 (46.80%), Postives = 213/359 (59.33%), Query Frame = 1
Query:   37 PLRALVEKQGFAVLDGGLATELEALGADLTSKLWSATKLLDDPHLIKAVHRSYYEAGADVAITCSYQASFQGFASIGVDETRATELLQLSVRMAAEARDEFWSDHQRLTPATTTASDSCGTAPLPCRRRRLRPLVAASVGSYGAFLADGSEYKGNYGMTIEQLMDWHRPRLRALAATGADLVACETVPCLAEARALVLLLNEDDGTACYSCLYAWISVSCADGAHLASGEALAELAPAVAAADAGGRVAALGVNCTAPRHAEAAVRALRAAVAALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTGEAHRFGELAARWHAAGAAAVGGCCRVGPDAVAAVRAAL 1113
            P+ ++++  G  VLDG LATELE  G DL   LWSA  LL+ P LIKAVHR Y+ AGAD AIT SYQA+F+GFA  G+ E  A +L++LSVR+A EARDEFW+D     PA               R  R RP+VAAS+GSYGA+LADGSEY+G+YG+T  +LMD+HRPRL  LA T ADL A ET+PCL EA+AL  LL  +     +   +AW+S S  D AH   GE +AE A   A  D   ++ A+G+NCT P +  A VRA+RAA                         + +I YPN+GE +D  +R W  G    H +G+ A  W   GA  +GGCCR  PD +  V AAL
Sbjct:    3 PIASILQSHGVMVLDGALATELERRGCDLNDPLWSAKVLLEQPELIKAVHRDYFAAGADCAITASYQATFEGFARRGLSEAEAADLMRLSVRLAVEARDEFWAD-----PAH--------------RAGRPRPIVAASIGSYGAYLADGSEYRGDYGLTEAELMDFHRPRLAVLAETEADLFAFETIPCLLEAQALTRLLAAE-----FPNRFAWVSFSARDEAHTCHGEPVAECA---AWLDGYTQIVAVGINCTPPPYIPALVRAMRAATG-----------------------KPIIVYPNSGEAYDVQSRRW-HGPAAHHTYGQQAQTWRRCGAQIIGGCCRTTPDDIRQVAAAL 310          
BLAST of jgi.p|Trimin1|175884 vs. uniprot
Match: A0A426TV77_9CHLR (Homocysteine S-methyltransferase n=1 Tax=Candidatus Viridilinea halotolerans TaxID=2491704 RepID=A0A426TV77_9CHLR)

HSP 1 Score: 283 bits (725), Expect = 2.040e-90
Identity = 161/356 (45.22%), Postives = 215/356 (60.39%), Query Frame = 1
Query:   37 PLRALVEKQGFAVLDGGLATELEALGADLTSKLWSATKLLDDPHLIKAVHRSYYEAGADVAITCSYQASFQGFASIGVDETRATELLQLSVRMAAEARDEFWSDHQRLTPATTTASDSCGTAPLPCRRRRLRPLVAASVGSYGAFLADGSEYKGNYGMTIEQLMDWHRPRLRALAATGADLVACETVPCLAEARALVLLLNEDDGTACYSCLYAWISVSCADGAHLASGEALAELAPAVAAADAGGRVAALGVNCTAPRHAEAAVRALRAAVAALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTGEAHRFGELAARWHAAGAAAVGGCCRVGPDAVAAVR 1104
            P+ A++++Q   +LDG LATELE  G DL   LWSA  LL++P LI+ +H  Y+ AGADVAIT SYQA+F GFA+ G+D ++A +L++L+V++A EARD+FW+D +                    R  R+RPLVAASVG YGAFL DGSEY+G+YG++I+ LM +HRPR+  LA  GADL+ACET+PCLAEA+AL  LL E   T      YAW S S  +G  ++ GE +A  A   AA D   ++ ALG+NCT P H  A +RA  +A +                       + ++ YPN+GE WD A+  W  G      F   A  WHAAGA  +GGCCR  P  +AA+R
Sbjct:    3 PITAILQQQPLIILDGALATELERRGCDLRDPLWSAKVLLENPALIRQIHADYFAAGADVAITASYQATFAGFAARGLDASQAADLMRLAVQLAIEARDKFWADPRN-------------------RVGRVRPLVAASVGPYGAFLHDGSEYRGDYGLSIDDLMAFHRPRMALLATAGADLLACETLPCLAEAQALATLLREFPTT------YAWFSFSARNGTEISHGEPIAACA---AAFDDHPQLVALGINCTPPAHIAALIRAAHSATS-----------------------KPIVVYPNSGEAWDGASATW-SGVATCDDFALQAGAWHAAGAQLIGGCCRTTPQHIAAMR 306          
BLAST of jgi.p|Trimin1|175884 vs. uniprot
Match: A0A3A0A3P9_9CHLR (Homocysteine S-methyltransferase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3A0A3P9_9CHLR)

HSP 1 Score: 284 bits (726), Expect = 2.660e-90
Identity = 168/360 (46.67%), Postives = 216/360 (60.00%), Query Frame = 1
Query:   37 PLRALVEKQGFAVLDGGLATELEALGADLTSKLWSATKLLDDPHLIKAVHRSYYEAGADVAITCSYQASFQGFASIGVDETRATELLQLSVRMAAEARDEFWSDHQRLTPATTTASDSCGTAPLPCRRRRLRPLVAASVGSYGAFLADGSEYKGNYGMTIEQLMDWHRPRLRALAATGADLVACETVPCLAEARALVLLLNEDDGTACYSCLYAWISVSCADGAHLASGEALAELAPAVAAADAGGRVAALGVNCTAPRHAEAAVRALRAAVAALAEPLPXXXXXXXXXXXXXXXQRLVIAYPNAGEQWDAAARAWVEGTGEAHRFGELAARWHAAGAAAVGGCCRVGPDAVAAVRAALE 1116
            PL+ L++ QG  +LDG LATELE  GADL   LWSA  LL+ P LI+ +H  YY AGADVA T SYQA+F G A  G+   +A +L++LSVR+A EAR++   D +  T A T  +        P     L  LVA S+G YGA+LADGSEY+G+YG+++E+LMD+HRPRL  LA +GADL+ACET+PCLAE  ALV LL E   T       AW+S SC D  H   GE  A+    VA A+   ++ A+G+NCT PR+ EA    LR+A     +PL                    +AYPN+GE+WDAA   WV G G    F E A RW AAGA  +GGCCR GP+ +  +   L+
Sbjct:    4 PLQPLLDAQGVVILDGALATELERRGADLNDPLWSAKLLLEAPALIRQLHYDYYAAGADVATTASYQATFAGLARRGLSHEQAADLMRLSVRLACEAREQIIRDWRSETGAATLNNRHSS----PFTHHSL--LVAVSIGPYGAYLADGSEYRGDYGLSVEELMDFHRPRLAVLAESGADLLACETIPCLAEGEALVRLLAEFPDTP------AWLSFSCCDETHTCHGERFADC---VALANESEQIVAVGLNCTPPRYVEAL---LRSAARVTDKPL--------------------LAYPNSGEEWDAANHCWVAGAGTTD-FAEPARRWFAAGARLIGGCCRTGPEDIRVIAQVLK 324          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|175884 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZJM3_9STRA3.890e-258100.00Homocysteine S-methyltransferase n=1 Tax=Tribonema... [more]
A0A7C6ZX44_9CHLR1.260e-9449.28Homocysteine S-methyltransferase n=1 Tax=Chlorofle... [more]
A0A3A0ANC9_9CHLR1.920e-9348.33Homocysteine S-methyltransferase n=1 Tax=Chlorofle... [more]
I0I4A8_CALAS2.710e-9347.24Homocysteine S-methyltransferase n=3 Tax=Caldiline... [more]
A0A3L7X8Q2_9CHLR4.510e-9146.94Homocysteine S-methyltransferase n=1 Tax=Chlorofle... [more]
A0A540V9S1_9CHLR8.460e-9147.90Homocysteine S-methyltransferase n=1 Tax=Litorilin... [more]
A0A1H0VNJ6_9BURK1.070e-9046.63Homocysteine S-methyltransferase n=2 Tax=Rhodofera... [more]
A0A3M1EAV5_9CHLR1.200e-9046.80Homocysteine S-methyltransferase n=1 Tax=Caldiline... [more]
A0A426TV77_9CHLR2.040e-9045.22Homocysteine S-methyltransferase n=1 Tax=Candidatu... [more]
A0A3A0A3P9_9CHLR2.660e-9046.67Homocysteine S-methyltransferase n=1 Tax=Chlorofle... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_131contigContig_131:413272..414884 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|175884|e_gw1.131.75.1
BRITEko00000,ko00001,ko01000
KEGG rclassRC00003,RC00035
KEGG ReactionR00650
KEGG Pathwayko00270,ko01100,ko01110,map00270,map01100,map01110
KEGG koko:K00547
EC2.1.1.10
DescriptionHomocysteine S-methyltransferase
COG categoryE
Max annot lvl200795|Chloroflexi
EggNOG OGsCOG2040@1|root,COG2040@2|Bacteria,2G7VY@200795|Chloroflexi
Evalue4.45e-94
Seed ortholog926550.CLDAP_20560
Hectar predicted targeting categoryother localisation
TranscriptId176206
TrackFilteredModels1
ProteinId175884
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|175884gene_13651Tribonema minus UTEX_B_3156 geneContig_131 413272..414884 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13651_1exon_13651_1Tribonema minus UTEX_B_3156 exonContig_131 413272..413538 +
exon_13651_2exon_13651_2Tribonema minus UTEX_B_3156 exonContig_131 413943..414322 +
exon_13651_3exon_13651_3Tribonema minus UTEX_B_3156 exonContig_131 414383..414884 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13651CDS_13651Tribonema minus UTEX_B_3156 CDSContig_131 413272..413538 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|175884Trimin1|175884|e_gw1.131.75.1Tribonema minus UTEX_B_3156 polypeptideContig_131 413272..414884 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13651 ID=mRNA_13651|Name=jgi.p|Trimin1|175884|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1149bp|location=Sequence derived from alignment at Contig_131:413272..414884+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGACCGCTGAGGAAGCAACTACTTGTGCCTGTCCTCTTCGCGCATT
GGTAGAGAAGCAGGGCTTCGCCGTCTTGGACGGCGGCTTGGCAACAGAGC
TGGAGGCACTGGGTGCAGATCTTACAAGCAAGCTTTGGAGCGCCACGAAA
CTGCTTGACGATCCTCATCTTATCAAGGCTGTACACAGGAGCTACTATGA
AGCGGGTGCAGATGTGGCCATCACCTGTAGCTATCAGGCGTCATTTCAAG
GATTCGCATCTATTGGGGTCGACGAGACGCGCGCGACAGAGCTCCTGCAG
CTCAGCGTCCGCATGGCCGCCGAAGCCCGGGACGAGTTCTGGTCCGATCA
CCAGCGATTGACACCGGCCACCACCACCGCCAGCGACAGCTGCGGCACCG
CTCCACTCCCCTGCCGCCGCCGCCGGCTCCGGCCACTCGTGGCGGCGAGC
GTCGGCAGCTATGGGGCGTTCCTGGCGGATGGCTCGGAGTACAAGGGCAA
CTACGGGATGACGATCGAGCAGCTGATGGACTGGCACAGGCCGCGGCTGC
GCGCGCTCGCGGCCACCGGCGCGGACCTCGTCGCGTGCGAGACGGTGCCG
TGCCTCGCGGAGGCGCGCGCGCTGGTGCTGCTGCTTAATGAAGACGACGG
CACCGCGTGTTATTCCTGTCTGTACGCCTGGATCAGCGTCTCGTGCGCCG
ACGGCGCGCACCTGGCGAGTGGCGAAGCTCTCGCGGAGCTGGCGCCCGCC
GTCGCGGCCGCCGACGCCGGCGGACGTGTCGCAGCGCTCGGCGTCAACTG
CACGGCGCCGCGGCACGCCGAGGCGGCCGTGCGCGCGCTGCGCGCCGCCG
TTGCGGCGCTCGCTGAGCCGCTGCCACAACCGCAGCAGCAGCAGCAGCGG
CAGCAGCAGCAGCAGCGGCGGCAGCGGCTCGTCATTGCGTACCCGAACGC
GGGCGAGCAGTGGGACGCCGCGGCGCGCGCGTGGGTGGAGGGCACGGGCG
AAGCGCATCGCTTTGGGGAGCTGGCAGCGCGGTGGCACGCGGCGGGCGCG
GCGGCAGTGGGCGGGTGCTGCCGCGTGGGCCCGGACGCGGTGGCCGCCGT
GCGCGCTGCGCTCGAGCAGCAGCACGGCTGCGGTGACGACTCTGACTAG
back to top

protein sequence of jgi.p|Trimin1|175884

>Trimin1|175884|e_gw1.131.75.1 ID=Trimin1|175884|e_gw1.131.75.1|Name=jgi.p|Trimin1|175884|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=383bp
MQTAEEATTCACPLRALVEKQGFAVLDGGLATELEALGADLTSKLWSATK
LLDDPHLIKAVHRSYYEAGADVAITCSYQASFQGFASIGVDETRATELLQ
LSVRMAAEARDEFWSDHQRLTPATTTASDSCGTAPLPCRRRRLRPLVAAS
VGSYGAFLADGSEYKGNYGMTIEQLMDWHRPRLRALAATGADLVACETVP
CLAEARALVLLLNEDDGTACYSCLYAWISVSCADGAHLASGEALAELAPA
VAAADAGGRVAALGVNCTAPRHAEAAVRALRAAVAALAEPLPQPQQQQQR
QQQQQRRQRLVIAYPNAGEQWDAAARAWVEGTGEAHRFGELAARWHAAGA
AAVGGCCRVGPDAVAAVRAALEQQHGCGDDSD*
back to top

mRNA from alignment at Contig_131:413272..414884+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13651 ID=mRNA_13651|Name=jgi.p|Trimin1|175884|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1613bp|location=Sequence derived from alignment at Contig_131:413272..414884+ (Tribonema minus UTEX_B_3156 )
ATGCAGACCGCTGAGGAAGCAACTACTTGTGCCTGTCCTCTTCGCGCATT GGTAGAGAAGCAGGGCTTCGCCGTCTTGGACGGCGGCTTGGCAACAGAGC TGGAGGCACTGGGTGCAGATCTTACAAGCAAGCTTTGGAGCGCCACGAAA CTGCTTGACGATCCTCATCTTATCAAGGCTGTACACAGGAGCTACTATGA AGCGGGTGCAGATGTGGCCATCACCTGTAGCTATCAGGCGTCATTTCAAG GATTCGCATCTATTGGGGTGAGTGATGGTGCAGGCACAGCTTCTTTGCTT GCATTCAGTGAATGTCGCCTTGGTCCTACCCCGCAACCCATCATACTTTG GCACAGAATCGCCACAGCCACATGCTGCTCATTTGGCAAGCATGGGATGT CCGACCAGATGCAGTTACAGGTCGAAATCAATGTACTGCCACTTTCTGTA AGCGACTGCCGCCCGCAGTGAAGACCTCAGTGTACTGTCAATCTGACGGG TCGCCCAGCAGCCAGACCTACAACGCAAAAGTGTCAGTGCAGCTGGTGTT TTCATCGCCGCCATATTCCATGCAGCCGCGCCACTGCACAGAACGGCCAT GCTCCCCCGCACTCCATGCACCGCACCTGGGCAACAGACATCATTGCTCA GCAAACGCCCCTCATCCGCAGGTCGACGAGACGCGCGCGACAGAGCTCCT GCAGCTCAGCGTCCGCATGGCCGCCGAAGCCCGGGACGAGTTCTGGTCCG ATCACCAGCGATTGACACCGGCCACCACCACCGCCAGCGACAGCTGCGGC ACCGCTCCACTCCCCTGCCGCCGCCGCCGGCTCCGGCCACTCGTGGCGGC GAGCGTCGGCAGCTATGGGGCGTTCCTGGCGGATGGCTCGGAGTACAAGG GCAACTACGGGATGACGATCGAGCAGCTGATGGACTGGCACAGGCCGCGG CTGCGCGCGCTCGCGGCCACCGGCGCGGACCTCGTCGCGTGCGAGACGGT GCCGTGCCTCGCGGAGGCGCGCGCGCTGGTGCTGCTGCTTAATGAAGACG AGTTGTGCGGCAGCGGCGGCGGCGCCAGCGCCGGCGGCAGCGGCAGCGGC AGCGGCGGCAGCGGCACCGCGTGTTATTCCTGTCTGTACGCCTGGATCAG CGTCTCGTGCGCCGACGGCGCGCACCTGGCGAGTGGCGAAGCTCTCGCGG AGCTGGCGCCCGCCGTCGCGGCCGCCGACGCCGGCGGACGTGTCGCAGCG CTCGGCGTCAACTGCACGGCGCCGCGGCACGCCGAGGCGGCCGTGCGCGC GCTGCGCGCCGCCGTTGCGGCGCTCGCTGAGCCGCTGCCACAACCGCAGC AGCAGCAGCAGCGGCAGCAGCAGCAGCAGCGGCGGCAGCGGCTCGTCATT GCGTACCCGAACGCGGGCGAGCAGTGGGACGCCGCGGCGCGCGCGTGGGT GGAGGGCACGGGCGAAGCGCATCGCTTTGGGGAGCTGGCAGCGCGGTGGC ACGCGGCGGGCGCGGCGGCAGTGGGCGGGTGCTGCCGCGTGGGCCCGGAC GCGGTGGCCGCCGTGCGCGCTGCGCTCGAGCAGCAGCACGGCTGCGGTGA CGACTCTGACTAG
back to top

Coding sequence (CDS) from alignment at Contig_131:413272..414884+

>mRNA_13651 ID=mRNA_13651|Name=jgi.p|Trimin1|175884|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1149bp|location=Sequence derived from alignment at Contig_131:413272..414884+ (Tribonema minus UTEX_B_3156 )
ATGCAGACCGCTGAGGAAGCAACTACTTGTGCCTGTCCTCTTCGCGCATT
GGTAGAGAAGCAGGGCTTCGCCGTCTTGGACGGCGGCTTGGCAACAGAGC
TGGAGGCACTGGGTGCAGATCTTACAAGCAAGCTTTGGAGCGCCACGAAA
CTGCTTGACGATCCTCATCTTATCAAGGCTGTACACAGGAGCTACTATGA
AGCGGGTGCAGATGTGGCCATCACCTGTAGCTATCAGGCGTCATTTCAAG
GATTCGCATCTATTGGGGTCGACGAGACGCGCGCGACAGAGCTCCTGCAG
CTCAGCGTCCGCATGGCCGCCGAAGCCCGGGACGAGTTCTGGTCCGATCA
CCAGCGATTGACACCGGCCACCACCACCGCCAGCGACAGCTGCGGCACCG
CTCCACTCCCCTGCCGCCGCCGCCGGCTCCGGCCACTCGTGGCGGCGAGC
GTCGGCAGCTATGGGGCGTTCCTGGCGGATGGCTCGGAGTACAAGGGCAA
CTACGGGATGACGATCGAGCAGCTGATGGACTGGCACAGGCCGCGGCTGC
GCGCGCTCGCGGCCACCGGCGCGGACCTCGTCGCGTGCGAGACGGTGCCG
TGCCTCGCGGAGGCGCGCGCGCTGGTGCTGCTGCTTAATGAAGACGACGG
CACCGCGTGTTATTCCTGTCTGTACGCCTGGATCAGCGTCTCGTGCGCCG
ACGGCGCGCACCTGGCGAGTGGCGAAGCTCTCGCGGAGCTGGCGCCCGCC
GTCGCGGCCGCCGACGCCGGCGGACGTGTCGCAGCGCTCGGCGTCAACTG
CACGGCGCCGCGGCACGCCGAGGCGGCCGTGCGCGCGCTGCGCGCCGCCG
TTGCGGCGCTCGCTGAGCCGCTGCCACAACCGCAGCAGCAGCAGCAGCGG
CAGCAGCAGCAGCAGCGGCGGCAGCGGCTCGTCATTGCGTACCCGAACGC
GGGCGAGCAGTGGGACGCCGCGGCGCGCGCGTGGGTGGAGGGCACGGGCG
AAGCGCATCGCTTTGGGGAGCTGGCAGCGCGGTGGCACGCGGCGGGCGCG
GCGGCAGTGGGCGGGTGCTGCCGCGTGGGCCCGGACGCGGTGGCCGCCGT
GCGCGCTGCGCTCGAGCAGCAGCACGGCTGCGGTGACGACTCTGACTAG
back to top