mRNA_13635 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|153692 vs. uniprot
Match: A0A835Z9G6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G6_9STRA) HSP 1 Score: 977 bits (2525), Expect = 0.000e+0 Identity = 535/535 (100.00%), Postives = 535/535 (100.00%), Query Frame = 1
Query: 1 VTGLLGPSGAGKTTLLELLAGRRAAGGAERGAWSGALELDGAAAASPEDVRAVSGYVAQDDVLPGTLTVYEHLAFHAALRLPRGHGRGGGATQRTARVLEVIDNLGLGAVADSLIGDAFRRGISGGERRRVSIAAELLTRPPLLFLDEPTSGLDAGSALAVMRLVAAAARRGTAVVASLHQPRREVFDALGRALLLCAGEVAYFGPPRGVRDYFTGADTFEPMLLAPPRPLKPARVSPRASVSAAAGWGGEAGDAAXXXXXXPAPLLSWAGLSYSIRPRGGXXXARRREILRCVSGYAGGGAGVVGLMGASGAGKTTLLELLAGRKHGCGGAAAAEGGRASGAIALNGAAAAPAHVRAIAGYVAQDDVLPAALTVCEHLAFHAALRLPPELAAAARAERVLEVVGELGLGLVADSRIGDSDRRGISGGERRRLSIAAELLSRPPLLFLDEPTTGLDAGAALAVMRMVAAAARRGAAVVASLHQPRREVFDALGRVLLLCDGEAAFFGPPHAVHARFAALGRPLAPLTPNPADAML 1605
VTGLLGPSGAGKTTLLELLAGRRAAGGAERGAWSGALELDGAAAASPEDVRAVSGYVAQDDVLPGTLTVYEHLAFHAALRLPRGHGRGGGATQRTARVLEVIDNLGLGAVADSLIGDAFRRGISGGERRRVSIAAELLTRPPLLFLDEPTSGLDAGSALAVMRLVAAAARRGTAVVASLHQPRREVFDALGRALLLCAGEVAYFGPPRGVRDYFTGADTFEPMLLAPPRPLKPARVSPRASVSAAAGWGGEAGDAAXXXXXXPAPLLSWAGLSYSIRPRGGXXXARRREILRCVSGYAGGGAGVVGLMGASGAGKTTLLELLAGRKHGCGGAAAAEGGRASGAIALNGAAAAPAHVRAIAGYVAQDDVLPAALTVCEHLAFHAALRLPPELAAAARAERVLEVVGELGLGLVADSRIGDSDRRGISGGERRRLSIAAELLSRPPLLFLDEPTTGLDAGAALAVMRMVAAAARRGAAVVASLHQPRREVFDALGRVLLLCDGEAAFFGPPHAVHARFAALGRPLAPLTPNPADAML
Sbjct: 1 VTGLLGPSGAGKTTLLELLAGRRAAGGAERGAWSGALELDGAAAASPEDVRAVSGYVAQDDVLPGTLTVYEHLAFHAALRLPRGHGRGGGATQRTARVLEVIDNLGLGAVADSLIGDAFRRGISGGERRRVSIAAELLTRPPLLFLDEPTSGLDAGSALAVMRLVAAAARRGTAVVASLHQPRREVFDALGRALLLCAGEVAYFGPPRGVRDYFTGADTFEPMLLAPPRPLKPARVSPRASVSAAAGWGGEAGDAAXXXXXXPAPLLSWAGLSYSIRPRGGXXXARRREILRCVSGYAGGGAGVVGLMGASGAGKTTLLELLAGRKHGCGGAAAAEGGRASGAIALNGAAAAPAHVRAIAGYVAQDDVLPAALTVCEHLAFHAALRLPPELAAAARAERVLEVVGELGLGLVADSRIGDSDRRGISGGERRRLSIAAELLSRPPLLFLDEPTTGLDAGAALAVMRMVAAAARRGAAVVASLHQPRREVFDALGRVLLLCDGEAAFFGPPHAVHARFAALGRPLAPLTPNPADAML 535
BLAST of jgi.p|Trimin1|153692 vs. uniprot
Match: A0A8K0IBD2_COCNU (Putative ABC transporter G family member 14 n=1 Tax=Cocos nucifera TaxID=13894 RepID=A0A8K0IBD2_COCNU) HSP 1 Score: 254 bits (649), Expect = 1.320e-71 Identity = 206/538 (38.29%), Postives = 276/538 (51.30%), Query Frame = 1
Query: 10 LLGPSGAGKTTLLELLAGRRAAGGAERGAWSGALELDGAAAASPEDVRAVSGYVAQDDVLPGTLTVYEHLAFHAALRLPRGHGRGGGATQRTARVLEVIDNLGLGAVADSLIGDAFRRGISGGERRRVSIAAELLTRPPLLFLDEPTSGLDAGSALAVMRLVAAAARRGTAVVASLHQPRREVFDALGRALLLCAGEVAYFGPPRGVRDYFTGADTFEPMLLAPPRPLKPARVSPRASVSAAAGWGGEAGDAAXXXXXXPAPLLSWAG-----LSYSIRPRGGXXXARRREILRCVSGYAGGGAGVVGLMGASGAGKTTLLELLAGRKHGCGGAAAAEGGRASGAIALNGAAAAPAHVRAIAGYVAQDDVLPAALTVCEHLAFHAALRLPPELAAAARAERVLEVVGELGLGLVADSRIGDSDRRGISGGERRRLSIAAELLSRPPLLFLDEPTTGLDAGAALAVMRMVAAAARRGAAVVASLHQPRREVFDALGRVLLLCDGEAAFFGPPHAVHARFAALGRPLAPLTP-NPADAML 1605
++GPSG+GKTTLL L GR A G SG++ +G ++ +R G+V QDD+L LTV E L + A LRLPR R ++ A+ V+ LGL +S+IG + RGISGGER+RVSI ELL P LL LDEPTSGLD+ A ++ +A R V+ ++HQP +F + LLLC G YFG +YF AP P+ PA LL A + Y I+ + + IL+ VSG G ++ ++G SG+GKTTLL L GR A G R SG+I NG + + +R G+V QDD+L LTV E L + A LRLP L+ +A + V+ ELGL +S IG S RGISGGER+R+SI ELL P LL LDEPT+GLD+ A ++ +A R V+ ++HQP +F ++LLLCDG +FG FA++G AP P NPAD +L
Sbjct: 48 MIGPSGSGKTTLLTALGGRLARPGRRL---SGSITYNGRPFSN--SLRRNMGFVNQDDILYPHLTVSETLLYTALLRLPRTLSR----DEKAAQAEAVMAELGLLGCRNSMIGGSLVRGISGGERKRVSIGQELLINPSLLLLDEPTSGLDSTIAGRIVTTIADLTRGARTVLMTIHQPSSRIFYMFHKILLLCDGHTIYFGKGSDAMNYFASIG------YAPAVPMNPADF-----------------------------LLDLANELFEDVVYKIKAKANGSKKGEKAILKGVSGAVLPGE-MLAMIGPSGSGKTTLLTALGGRL-------ARPGRRLSGSITYNGRPFSNS-LRRNMGFVNQDDILYPHLTVSETLLYTALLRLPRTLSRDEKAAQAEAVMAELGLLGCRNSMIGGSLVRGISGGERKRVSIGQELLINPSLLLLDEPTSGLDSTIAGRIVTTIADLTRGARTVLMTIHQPSSRIFYMFHKILLLCDGHTIYFGKGSDAMNYFASIG--YAPAVPMNPADFLL 530
BLAST of jgi.p|Trimin1|153692 vs. uniprot
Match: A0A2U1M6R7_ARTAN (ABC transporter, G1, P-loop containing nucleoside triphosphate hydrolase n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1M6R7_ARTAN) HSP 1 Score: 244 bits (622), Expect = 1.510e-66 Identity = 201/674 (29.82%), Postives = 308/674 (45.70%), Query Frame = 1
Query: 1 VTGLLGPSGAGKTTLLELLAGRRAAGGAERGAWSGALELDGAAAASPEDVRAVSGYVAQDDVLPGTLTVYEHLAFHAALRLPRGHGRGGGATQRTARVLEVIDNLGLGAVADSLIGDAFRRGISGGERRRVSIAAELLTRPPLLFLDEPTSGLDAGSALAVMRLVAAAARRGTAVVASLHQPRREVFDALGRALLLCAGEVAYFGPPRGVRDYFTGADT-------------------------FEPMLLAPPRPLKPARVS-----------------------------PRASVSAAAGWGGEAGDA---AXXXXXXPAPL-------------------------------------------------------------------------------------------LSWAGLSYSI---RPRGGXXXARRREILRCVSGYAGGGAGVVGLMGASGAGKTTLLELLAGRKHGCGGAAAAEGGRASGAIALNGAAAAPAHVRAIAGYVAQDDVLPAALTVCEHLAFHAALRLPPELAAAARAERVLEVVGELGLGLVADSRIGDSDRRGISGGERRRLSIAAELLSRPPLLFLDEPTTGLDAGAALAVMRMVAAAARRGAAVVASLHQPRREVFDALGRVLLLCDGEAAFFGPPHAVHARFAALGRPL 1569
+ ++GPSGAGK+T L+ LAGR A G E G+++++G + ++ VS YV QDD L LTV+E F A +RLP R +++ RV+E++D LGL + A + IGD RRG+SGGERRRVSI +++ +P LLFLDEPTSGLD+ SA +V+ V AR G+ V+ ++HQP + L R ++L G + Y G P + + G + +P+++ LKP V+ PR + + G ++ D + P+ L + LSYS+ + + G + +L +SG A G ++ +MG SGAGK+T L+ LAGR G G++ + G ++++ ++ YV QDD L A LTV E F A +RLPP L+ + + +RV+E++ +LGL A + IGD RRG+SGGERRR+SI +++ +P LLFLDEPT+GLD+ +A +V+ V AR G+ V+ ++HQP + L R+++L G + G P+A+ A RP+
Sbjct: 84 IMAIMGPSGAGKSTFLDALAGRIAQGSLE-----GSVQIEGKPVTASY-MKMVSSYVMQDDQLFAMLTVFETFMFAAEVRLPPSLSR----SEKKKRVIELLDQLGLTSTAHTYIGDEGRRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTSAFSVVEKVKDIARNGSIVLMTIHQPSFRIQMLLDRIVVLARGRLIYLGSPNALSAHLAGFERPVPENENNLEYLLDVIKEYDESTIGLDPLVMYQREGLKPDPVAQTPVPKQKTPRRQQKVHRHGLSFSSGNTTPRNNSTTIDYHGNDSDDEFDNSRERKVAQTPMNMASGVYHPRLASDFYKDFSVWLYHTIMYNTFVGRSRNLKHCMRYMNMAGRFARTDTNRSLETLLDLDKTKAKSNKNMVQNPNKKLQPGCGLEFNNLSYSVMKKQKKDGVWITKEAYLLNDISGQAVRGE-IMAIMGPSGAGKSTFLDALAGR---------IAQGSLEGSVQIEGKPVTASYMKMVSSYVMQDDQLFAMLTVFETFMFAAEVRLPPSLSRSEKKKRVIELLDQLGLTSTAHTYIGDEGRRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTSAFSVVEKVKDIARNGSIVLMTIHQPSFRIQMLLDRIVVLARGRLIYLGSPNALSAHLEGFERPV 737
BLAST of jgi.p|Trimin1|153692 vs. uniprot
Match: A0A5N6RXX1_9ROSI (Uncharacterized protein n=1 Tax=Carpinus fangiana TaxID=176857 RepID=A0A5N6RXX1_9ROSI) HSP 1 Score: 235 bits (599), Expect = 3.910e-64 Identity = 193/554 (34.84%), Postives = 277/554 (50.00%), Query Frame = 1
Query: 1 VTGLLGPSGAGKTTLLELLAGRRAAGGAERGAWSGALELDGAAAASPEDVRAVSGYVAQDDVLPGTLTVYEHLAFHAALRLPRGHGRGGGATQRTARVLEVIDNLGLGAVADSLIGDAFRRGISGGERRRVSIAAELLTRPPLLFLDEPTSGLDAGSALAVMRLVAAAARRGTAVVASLHQPRREVFDALGRALLLCAGEVAYFGPPRGVRDYFTGADTFEPMLLAPPRPL------------KPARVSPRASVSAAAGWGGEAGDAAXXXXXXPAPL-LSWAGLSYSIRPRGGXXXARR-----REILRCVSGYAGGGAGVVGLMGASGAGKTTLLELLAGRKHGCGGAAAAEGGRASGAIALNGAAAAPAHVRAIAGYVAQDDVLPAALTVCEHLAFHAALRLPPELAAAARAERVLEVVGELGLGLVADSRIGDSDRRGISGGERRRLSIAAELLSRPPLLFLDEPTTGLDAGAALAVMRMVAAAARRGAAVVASLHQPRREVFDALGRVLLLCDGEAAFFGPPHAVHARFAALG-RPLAPLTPNPADAML 1605
V +LGPSG+GKTTLL L GG ++ +G ++ ++ +G+V+QDD+L LTV E L F + LRLP + ++ VI LGL + +S+IG +F RG+SGGER+RVSI E+L P LLFLDEPTSGLD+ +A ++ + + G VV ++HQP +F + LLL G YFG G +YF+ + P++ P + + A + + P+ L + + Y I+ G R+ + IL+ V+G G V+ ++G SG+GKTTLL L GR GG+ G+I NG A R G+V QDD+L LTV E L F + LRLP + V+ +LGL DS IG S RG+SGGER+R+SI E+L P LLFLDEPT+GLD+ A ++ + + G VV ++HQP +F +VLLL +G +FG F+++G PL + NPAD +L
Sbjct: 88 VLAMLGPSGSGKTTLLTAL------GGKXXXXXXXSITYNGRPFSNA--MKQSTGFVSQDDLLHPHLTVTETLVFTSLLRLPNTFTK----DEKVQHAEAVITQLGLTSCKNSIIGGSFVRGVSGGERKRVSIGQEMLINPSLLFLDEPTSGLDSTTAQRIVSTLWELSNGGRTVVMTIHQPSSRLFYMFHKVLLLSEGNTLYFGRGSGAMEYFSSVG-YSPLVAMNPADFLLDLANGLMGSENHMKQEMAPDIEAQTNYKKTDTEFPGVFVKANRPVTLKFEDVVYKIKTEKGGLLDRKGNSEEKVILKGVTGMVQPGE-VLAMLGPSGSGKTTLLTALGGRL----------GGQLDGSITYNGRPFTNAMKRNT-GFVTQDDLLHPHLTVTETLVFTSLLRLPNTFTKDEKVHHAEAVITQLGLTKCKDSIIGGSFVRGVSGGERKRVSIGQEMLINPSLLFLDEPTSGLDSTTAQRIVSTLWELSNGGRTVVMTIHQPSSRLFYMFHKVLLLSEGNTLYFGRGSGAMEYFSSVGYSPLVAM--NPADFLL 614
BLAST of jgi.p|Trimin1|153692 vs. uniprot
Match: UPI001F5FAAFA (ABC transporter G family member 1-like n=1 Tax=Vigna umbellata TaxID=87088 RepID=UPI001F5FAAFA) HSP 1 Score: 236 bits (601), Expect = 6.090e-64 Identity = 199/590 (33.73%), Postives = 295/590 (50.00%), Query Frame = 1
Query: 1 VTGLLGPSGAGKTTLLELLAGRRAAGGAERGAWSGALELDGAAAASPEDVRAVSGYVAQDDVLPGTLTVYEHLAFHAALRLPRGHGRGGGATQRTARVLEVIDNLGLGAVADSLIGDAFRRGISGGERRRVSIAAELLTRPPLLFLDEPTSGLDAGSALAVMRLVAAAARRGTAVVASLHQPRREVFDALGRALLLCAGEVAYFG-------PPRGVRDYFTGADTFEPMLLAPPR-PLKPARVSPRASVSA------------------AAGWGGEAG--------DAAXXXXXXPAPLLSWAGLSYSIRPR---------------------------GGXXXARRREILRCVSGYAGGGAGVVGLMGASGAGKTTLLELLAGRKHGCGGAAAAEGGRASGAIALNGAAAAPAHVRAIAGYVAQDDVLPAALTVCEHLAFHAALRLPPELAAAARAERVLEVVGELGLGLVADSRIGDSDRRGISGGERRRLSIAAELLSRPPLLFLDEPTTGLDAGAALAVMRMVAAAARRGAAVVASLHQPRREVFDALGRVLLLCDGEAAFFGPPHAVHARFAALGRPLAPLTPN 1587
+ +LG SG+GK+TL++ LA R A +G+ G + L+G S ++ +S YV QDD+L LTV E L F A RLPR + +++ ARV +I+ LGL A ++IGD RG+SGGERRRVSI +++ P LLFLDEPTSGLD+ SA V++++ A+ G+ V+ S+HQP + L L + +F PP + ++ + P L R SA A+G G E DAA +LS++ L+YS++ R G R + +L +SG A G ++ ++GASG+GK+TL++ LA R G G +ALNG ++ I+ YV QDD+L LTV E L F A RLP L+ + + RV ++ +LGL A + IGD RG+SGGERRR+SI +++ P LLFLDEPT+GLD+ +A V++++ A+ G+ V+ S+HQP + L R++ L G+ + G P + F+ G P+ P T N
Sbjct: 148 IMAVLGASGSGKSTLIDALANRIA-----KGSLKGTVALNGETLES-RLLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSK----SKKNARVQALIEQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFLVVKVLQRIAQSGSIVIMSIHQPSYRILGPSTFLLQL----INHFNTITPSEAPPEAMSSRIVADNSLAINNVTTPYFDLMEMDDLTRRPASAEMPTLGQLLKHVGDARKEASGDGSETPVHHALDIVDAAGVGPRSLPFVLSFSNLTYSVKARRKMSLSSVFPCRGSRLGASAVSEAPAVGESMFRRTKTLLNDISGEARDGE-IMAVLGASGSGKSTLIDALANR---------IAKGSLKGTVALNGETLESRLLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKNARVQALIEQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFLVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPSQLPVFFSEFGHPI-PETDN 712
BLAST of jgi.p|Trimin1|153692 vs. uniprot
Match: C5KS56_PERM5 (ATP-binding cassette transporter, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KS56_PERM5) HSP 1 Score: 229 bits (584), Expect = 6.610e-63 Identity = 178/550 (32.36%), Postives = 281/550 (51.09%), Query Frame = 1
Query: 1 VTGLLGPSGAGKTTLLELLAGRRAAGGAERGAWSGALELDGAAAASPEDVRAVSGYVAQDDVLPGTLTVYEHLAFHAALRLPRGHGRGGGATQRTARVLEVIDNLGLGAVADSLIGDAFRRGISGGERRRVSIAAELLTRPPLLFLDEPTSGLDAGSALAVMRLVAAAARRGTAVVASLHQPRREVFDALGRALLLCAGEVAYFGPPRGVRDYFTGAD---------------TFEPMLLAPPRPLKPARVSPRASVSAAAGWGGEAGDAAXXXXXXPAPLLSWAGLSYSIRPRGGXXXARRREILRCVSGYAGGGAGVVGLMGASGAGKTTLLELLAGRKHGCGGAAAAEGGRASGAIALNGAAAAPAHVRAIAGYVAQDDVLPAALTVCEHLAFHAALRLPPELAAAARAERVLEVVGELGLGLVADSRIGDSDRRGISGGERRRLSIAAELLSRPPLLFLDEPTTGLDAGAALAVMRMVAAAARRGAAVVASLHQPRREVFDALGRVLLLCDGEAAFFGPPHAVHARFAALGRPLAPLTPNPADAML 1605
+T +LGPSG+GK+TL+ +L GR++ G R + G + +G P + R+ YV QDD L T T E L A LR+ H + + A V +++D+L L + +++G+ RGISGGER+R S+ EL+++P ++FLDEP SGLD+ +A+ M+++ AR G AVV ++HQP E++ L++C+G + Y G ++ + + T + +P P+ R SVS G + A+ L W + +SI+ + +IL +G G + ++G SG+GK+TL+ +L GR+ G G G I+ NG P + R+ YV QDD L A T E L A LR+ + A A V +++ L L ++ +G+ RGISGGER+R S+ EL+S+P ++FLDEP +GLD+ AA+ M+++ AR G AV+ ++HQP E++ L++C G + GP + A P NPAD +L
Sbjct: 62 LTAVLGPSGSGKSTLMNVLGGRQSLRGDGR-TFDGEISFNGKVQ-DPFNFRSHIAYVMQDDHLTATATPREILEMSARLRM---HDQSKAEVE--ALVTDLLDSLKLTSCESTVVGNEVIRGISGGERKRTSVGMELISKPQMIFLDEPLSGLDSYAAVTTMKVLKDLARSGVAVVVTVHQPSSEIYSMFDNTLVICSGRMVYLGSTADLKAFIQDSTSKXXIIFYAFKRAVMTSQTPTASPEDPIADLRNFRSLSVS-----GSKINGAS----------LEWTNVDFSIKDK---------KILIDCTGMVRPGE-LTAVLGPSGSGKSTLMNVLGGRQSLRG-----NGRTFDGEISFNGKVQDPFNFRSHIAYVMQDDHLTATATPREILEMSARLRMHDQSKAEVEA-LVTDLLDSLKLTSCENTVVGNDVIRGISGGERKRTSVGMELISKPQMIFLDEPLSGLDSYAAVTTMKVLKDLARSGVAVMVTVHQPSSEIYSMFDNTLVICSGRMVYLGPTADLKAFIQDSTSKQCPSDYNPADFVL 573
BLAST of jgi.p|Trimin1|153692 vs. uniprot
Match: A0A2U1L5L2_ARTAN (ABC-2 type transporter family protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1L5L2_ARTAN) HSP 1 Score: 228 bits (580), Expect = 7.300e-62 Identity = 210/644 (32.61%), Postives = 297/644 (46.12%), Query Frame = 1
Query: 1 VTGLLGPSGAGKTTLLELLAGRRAAGGAERGAWSGALELDGAAAASPEDVRAVSG---YVAQDDVLPGTLTVYEHLAFHAALRLPRGHGRGGGATQRTARVLEVIDN----LGLGAVADSLIGDAFRRGISGGERRRVSIAAELLTRPPLLFLDEPTSGLDAGSALAVMRLVAAAARRGTAVVASLHQPRREVFDALGRALLLCAGEVAYFGPPRGVRDYFTGA------------------------------------------DTFEPMLLAP--PRPLKPARVSPRA--------------------SVSAAAGWG----------------------GEAGD----------------AAXXXXXXPAPLLSWAGLSYSIRPRGGXXXARRREILRCVSGYAGGGAGVVGLMGASGAGKTTLLELLAGRKHGCGGAAAAEGGRASGAIALNGAAAAPAHVRAIAGYVAQDDVLPAALTVCEHLAFHAALRLPPELAAAARAERVLEVVGELGLGLVADSRIGDSDRRGISGGERRRLSIAAELLSRPPLLFLDEPTTGLDAGAALAVMRMVAAAARRGAAVVASLHQPRREVFDALGRVLLLCDGEAAFFGPPHAVHARFAALGRPLAPLTPNPADAML 1605
+ ++GPSG+GK+TLL+ LAGR A + +G + L+G E+ + G YV Q+DVL GTL+V E + + A LRLP T V + I+ +GL AD+L+G+ RGISGGE++R+SIA E+L RP L+FLDEPTSGLD+ SA V + AR G V++S+HQP EVF LL GE YFG + ++F + D F ++ A R ++ R S +A S ++ AGW G+ GD A L W L + P G +R +L ++G+A G ++ +MG SG+GK+TLL+ LAGR A+ +G + LNG + YV Q+DVL L+V E + + A LRLP ++ + + + E+GL AD+ +G+ RGISGGE++RLSIA E+L RP L+FLDEPT+GLD+ +A V + AR G V++S+HQP EVF + LL GE +FG FA G P P+ NPAD L
Sbjct: 77 IMAIMGPSGSGKSTLLDALAGRLA----KNVVMTGNVLLNG------EEKKLTYGGVAYVTQEDVLMGTLSVRETITYSAHLRLPN--------TMSKEEVHDTIEGTIIEMGLEDCADTLVGNWHLRGISGGEKKRLSIALEILVRPRLMFLDEPTSGLDSASAFFVAHALRGVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKDAIEFFAESGFPCPIKRNPADHFLRCINSDFDAVTATLKGSLRIHEERQETDPFMNLVTAEIKARLVEKYRWSKQAAKARSKMKQLSAIRGSETMTSTASQAGWWKQLITLTKRSFVNMSRDMGYYWGDVGDDRMAEHGNDKGGGISMGPSMSMKQRATYLVWQDLRVML-PNSGDGPTKR--LLHGINGFAEPGR-IMAIMGPSGSGKSTLLDALAGRL--------AKNVVMTGNVLLNGEEKKLTYGGV--AYVTQEDVLMGTLSVRETITYSAHLRLPNTMSKEEVRDTIEGTIIEMGLEDCADTLVGNWHLRGISGGEKKRLSIALEILVRPRLMFLDEPTSGLDSASAFFVAHALRGVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKDAIEFFAESGFPC-PIKRNPADHFL 687
BLAST of jgi.p|Trimin1|153692 vs. uniprot
Match: A0A814AY65_9BILA (Hypothetical protein n=2 Tax=Bdelloidea TaxID=44578 RepID=A0A814AY65_9BILA) HSP 1 Score: 221 bits (563), Expect = 4.690e-59 Identity = 173/536 (32.28%), Postives = 258/536 (48.13%), Query Frame = 1
Query: 10 LLGPSGAGKTTLLELLAGRRAAGGAERGAWSGALELDGAAAAS----PEDVRAVSGYVAQDDVLPGTLTVYEHLAFHAALRLPRGHGRGGGATQRTARVLEVIDNLGLGAVADSLIGDAFR-RGISGGERRRVSIAAELLTRPPLLFLDEPTSGLDAGSALAVMRLVAAAARRGTAVVASLHQPRREVFDALGRALLLCAGEVAYFGPPRGVRDYFTG-----------ADTFEPMLLAPP--RPLKPARVSPRASVSAAAGWGGEAGDAAXXXXXXPAPLLSWAGLSYSIRPRGGXXXARRREILRCVSGYAGGGAGVVGLMGASGAGKTTLLELLAGRKHGCGGAAAAEGGRASGAIALNGAAAAPAHVRAIAGYVAQDDVLPAALTVCEHLAFHAALRLPPELAAAARAERVLEVVGELGLGLVADSRIGDSDR-RGISGGERRRLSIAAELLSRPPLLFLDEPTTGLDAGAALAVMRMVAAAARRGAAVVASLHQPRREVFDALGRVLLLCDGEAAFFGPPHAVHARFAALG 1560
++G SGAGKTTLL +L RR G L++ G + ++ VSGYV Q+++ ++T EHL F+A LRL R + +R RV E++D L L ++IG+ R +G+SGGE+RR+ A+E++T PPLLF DEPTSGLD A + + +G +V ++HQP E+F LL G VAYFG + V +F+G +D F L P R RV Y P R+ + G+ +GAGKTTLL +L R+ G + +G + +NG ++ ++GYV Q+++ A++T EHL F+A LRL ++ A R +RV E++ L L + IG+ R +G+SGGE+RRL A+E+++ PPLLF DEPT+GLD A + + +G +V ++HQP E+F + LL +G A+FG V F+ LG
Sbjct: 154 IMGASGAGKTTLLNILTQRR----------PGTLKVTGDVRVNGTKMDRNINRVSGYVQQEELFIASMTTREHLHFNAMLRLNRDVTK----EERIKRVDELLDFLNLKKAEKTIIGEPGRIKGLSGGEKRRLLFASEVMTDPPLLFADEPTSGLDGSMAFTICDAMRKLCNQGKTIVCTIHQPSSEIFQLFDTLYLLAEGRVAYFGSRKKVEGFFSGLGYVAPDNYNLSDFFIQTLAILPFDREASLERVEHICD-------------------------------EYEKSPLYAQHIGEARQYHEIDDDQSNSTGGIFH-RSTNGAGKTTLLNILTQRRPGT--------LKVTGDVRVNGTKM-DRNINRVSGYVQQEELFIASMTTREHLHFNAMLRLNRDVTKAERIKRVDELLDFLNLKKAEKTIIGEPGRIKGLSGGEKRRLLFASEVMTDPPLLFADEPTSGLDGSMAFTICDAMRKLCNQGKTIVCTIHQPSSEIFQLFDTLYLLAEGRVAYFGSRKKVEGFFSGLG 634
BLAST of jgi.p|Trimin1|153692 vs. uniprot
Match: D8LNV5_ECTSI (ATP-binding cassette superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV5_ECTSI) HSP 1 Score: 219 bits (559), Expect = 4.640e-58 Identity = 123/218 (56.42%), Postives = 154/218 (70.64%), Query Frame = 1
Query: 1 VTGLLGPSGAGKTTLLELLAGRRAAGGAERGAWSG--ALELDGAAA-ASPEDVRAVSGYVAQDDVLPGTLTVYEHLAFHAALRLPRGHGRGGGATQRTARVLEVIDNLGLGAVADSLIGDAFRRGISGGERRRVSIAAELLTRPPLLFLDEPTSGLDAGSALAVMRLVAAAARRGTAVVASLHQPRREVFDALGRALLLCAGEVAYFGPPRGVRDYFT 645
+TG+LGPSGAGK++LL++LAGR+ +G G SG ++ LDG PED+R V+GYV Q+DVLPGTLT YEHL FHA LR+PR +R R L V+ LGL VADS +GDA +RG+SGGE+RR+SIAAEL+ PPLLFLDEPT+GLDA +AL VM L+ A RGT V+ SLHQPR V + L +LL G+VAYFG P+G YF+
Sbjct: 596 LTGILGPSGAGKSSLLDILAGRKRSG---EGRASGHVSVSLDGRGGRGGPEDIRRVAGYVPQEDVLPGTLTCYEHLMFHARLRMPRKASH----AERRERALAVLAELGLSRVADSRVGDARKRGLSGGEKRRLSIAAELMAGPPLLFLDEPTTGLDAATALRVMVLLRGVASRGTTVLCSLHQPRPRVLNLLDNVMLLSRGKVAYFGSPQGSESYFS 806
BLAST of jgi.p|Trimin1|153692 vs. uniprot
Match: A0A6H5KT00_9PHAE (ABC protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT00_9PHAE) HSP 1 Score: 219 bits (557), Expect = 7.800e-58 Identity = 125/236 (52.97%), Postives = 161/236 (68.22%), Query Frame = 1
Query: 910 VVGLMGASGAGKTTLLELLAGRKHGCGGAAAAEGGRASGAIALN----GAAAAPAHVRAIAGYVAQDDVLPAALTVCEHLAFHAALRLPPELAAAARAERVLEVVGELGLGLVADSRIGDSDRRGISGGERRRLSIAAELLSRPPLLFLDEPTTGLDAGAALAVMRMVAAAARRGAAVVASLHQPRREVFDALGRVLLLCDGEAAFFGPPHAVHARFAALGRPLAPLTPNPADAML 1605
+ G++G SGAGK++LL++LAGRK + GRASG + ++ G PA +R +AGYV Q+DVLP LT EHL FHA LR+P + R ER L V+GELGL VADSR+GD+ +RG+SGGE+RRLSIAAEL++ PPLLFLDEPTTGLDA AL VM ++ A RG V+ SLHQPR V + L V+LL G+ A+FG P + F+++GRP P+PADAML
Sbjct: 498 LTGILGPSGAGKSSLLDILAGRKR-------SGEGRASGQVFVSLDGRGGRGGPAEIRRVAGYVPQEDVLPGTLTCYEHLMFHARLRMPRKATHGERRERALAVLGELGLSRVADSRVGDARKRGLSGGEKRRLSIAAELMAGPPLLFLDEPTTGLDAATALRVMVLLKGVASRGTTVLCSLHQPRPRVLNLLDNVMLLSRGKVAYFGSPQGSESYFSSVGRPFPAEQPHPADAML 726 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|153692 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_13635 ID=mRNA_13635|Name=jgi.p|Trimin1|153692|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1605bp|location=Sequence derived from alignment at Contig_131:279001..284509- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GTGACGGGGCTGCTGGGCCCGTCCGGCGCGGGCAAGACGACGCTGCTGGAback to top protein sequence of jgi.p|Trimin1|153692 >Trimin1|153692|gw1.131.95.1 ID=Trimin1|153692|gw1.131.95.1|Name=jgi.p|Trimin1|153692|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=535bp VTGLLGPSGAGKTTLLELLAGRRAAGGAERGAWSGALELDGAAAASPEDVback to top mRNA from alignment at Contig_131:279001..284509- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_13635 ID=mRNA_13635|Name=jgi.p|Trimin1|153692|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5509bp|location=Sequence derived from alignment at Contig_131:279001..284509- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_131:279001..284509- >mRNA_13635 ID=mRNA_13635|Name=jgi.p|Trimin1|153692|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1605bp|location=Sequence derived from alignment at Contig_131:279001..284509- (Tribonema minus UTEX_B_3156 )back to top |