mRNA_13617 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|175935
Unique NamemRNA_13617
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|175935 vs. uniprot
Match: A0A835ZAT3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAT3_9STRA)

HSP 1 Score: 514 bits (1324), Expect = 2.440e-182
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 1 
Query:    1 MLADRGRLDVLQWGTDTHGFRPSAEVAMTAARSGQVQVLQWLHELMPWSAXXXXXXXXXXXXXXXXXXEDVFEDATXXXXXXXXXXXXXXXXXXXXXXREHECPWDERASRQAAVNGHVQDEAFEWAYGHGLPVAAKTEADMAERGDVARLKWLRARGHAFQSPPDMWAVADFGTMRWLQQHRFPCDERAMAAALERGDADAVRWLVHEVGHAACDHHACIAAASAGDLASLAPLHAACRATGGGGHDADVCAAAAAGGHMDVLRWARGAGCAWDEXXXXXXXXXXXXXXXXXXXXQRCPCDVAELVYMMQHQRLS 948
            MLADRGRLDVLQWGTDTHGFRPSAEVAMTAARSGQVQVLQWLHELMPWSAXXXXXXXXXXXXXXXXXXEDVFEDATXXXXXXXXXXXXXXXXXXXXXXREHECPWDERASRQAAVNGHVQDEAFEWAYGHGLPVAAKTEADMAERGDVARLKWLRARGHAFQSPPDMWAVADFGTMRWLQQHRFPCDERAMAAALERGDADAVRWLVHEVGHAACDHHACIAAASAGDLASLAPLHAACRATGGGGHDADVCAAAAAGGHMDVLRWARGAGCAWDEXXXXXXXXXXXXXXXXXXXXQRCPCDVAELVYMMQHQRLS
Sbjct:    1 MLADRGRLDVLQWGTDTHGFRPSAEVAMTAARSGQVQVLQWLHELMPWSAXXXXXXXXXXXXXXXXXXEDVFEDATXXXXXXXXXXXXXXXXXXXXXXREHECPWDERASRQAAVNGHVQDEAFEWAYGHGLPVAAKTEADMAERGDVARLKWLRARGHAFQSPPDMWAVADFGTMRWLQQHRFPCDERAMAAALERGDADAVRWLVHEVGHAACDHHACIAAASAGDLASLAPLHAACRATGGGGHDADVCAAAAAGGHMDVLRWARGAGCAWDEXXXXXXXXXXXXXXXXXXXXQRCPCDVAELVYMMQHQRLS 316
[Close]
BLAST of jgi.p|Trimin1|175935 vs. uniprot
Match: A0A835YTI3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTI3_9STRA)

HSP 1 Score: 368 bits (945), Expect = 4.940e-123
Identity = 233/430 (54.19%), Postives = 249/430 (57.91%), Query Frame = 1 
Query:    1 MLADRGRLDVLQWGTDTHGFRPSAEVAMTAARSGQVQVLQWLHELMPWSAXXXXXXXXXXXXXXXXXXED-----------------------------------------VFEDATXXXXXXXXXXXXXXXXXXXXXXR--------------------EHECPWDERASRQAAVNGHV----------------------------------------------------QDEAFEWAYGHGLPVAAKTEADMAERGDVARLKWLRARGHAFQSPPDMWAVADFGTMRWLQQHRFPCDERAMAAALERGDADAVRWLVHEVGHAACDHHACIAAASAGDLASLAPLHAACRAT-GGGGHDADVCAAAAAGGHMDVLRWARGAGCAWDEXXXXXXXXXXXXXXXXXXXXQRCPCDVAELVYMMQHQRLS 948
            MLADRGRLDVLQWGT  HGFRPSAEVA+TAARSGQVQ+LQWLHE+MPWSA                   D                                          F +A                                            E E PWDE     AA +G +                                                    +DEAFEWAYGHGLPVAAKT+A+MAERGDV RL+WLRARGHAF+SPPDMWAVADFGTMRWL +H FPCD RAMAAALERGDADAVRWL  EVGH  CD+HACIAAA+AGDL +LAPLHAACRA  GGGGHDADVCAAAAAGGHMDVL+WARGAGCAWDEXXXXXXXXXXXXXXXXXXXX RCPCDVAELVYMMQHQRLS
Sbjct:    1 MLADRGRLDVLQWGTGAHGFRPSAEVAITAARSGQVQILQWLHEVMPWSAETTHSLLHNAAFCGQIGALDWLIAAHDWRGGXXXXXXXXXXAGELPALQFLRAHGSSWNDTTFSEAAANGQIGVMEWLVNAGAPLMVCSAYRGAARRGQRASLEWLEAAFEDETPWDESIFAYAAESGDLALLHWLHXXXXXXXXXXXXXXXXXXXXXXXXXXLAAAAPLALDVCDVAYSSYEDEAFEWAYGHGLPVAAKTKAEMAERGDVPRLEWLRARGHAFKSPPDMWAVADFGTMRWLHKHGFPCDARAMAAALERGDADAVRWLADEVGHGVCDYHACIAAAAAGDLTTLAPLHAACRAAPGGGGHDADVCAAAAAGGHMDVLQWARGAGCAWDEXXXXXXXXXXXXXXXXXXXXXRCPCDVAELVYMMQHQRLS 430
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BLAST of jgi.p|Trimin1|175935 vs. uniprot
Match: A0A835YTK1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK1_9STRA)

HSP 1 Score: 229 bits (584), Expect = 3.890e-68
Identity = 148/354 (41.81%), Postives = 164/354 (46.33%), Query Frame = 1 
Query:    4 LADRGRLDVLQWGTDTHGFRPSAEVAMTAARSGQVQVLQWLHELMP----------------WSAXXXXXXXXXXXXXXXXXXEDVFEDATXXXXXXXXXXXXXXXXXXXXXXR-------------EHECPWDERASRQAAVNGHVQDEAFEWAYGHGL------------------------------------------------------PVAAKTEADMAERGDVARLKWLRARGHAFQSPPDMWAVADFGTMRWLQQHRFPCDERAMAAALERGDADAVRWLVHEVGHAACDHHACIAAASAGDLASLAPLHAACRATGGGGHDADVCAAAAAGGHMDVLRWARGAGC 816
            LADRGRLDVLQWG   HGFRPSAEVA+TAARSGQVQ+LQWLHE                   W                    E +    T                      R             + E PWDE     AA +G++     +  +  G                                                       PVAAKTEA+MAERGDVARL+WL ARGHAFQSPPDMWAVADFGTMRWL +HRFPCD RAMAAALERGDADAVRWL  EVGH  CD+HACIAAA+               A GG   D  VC  A   GH+DVL+WA   GC
Sbjct:  129 LADRGRLDVLQWGAGAHGFRPSAEVAITAARSGQVQILQWLHENAAFCGXXXXXXXLVARHDWRDGGAAACAAAAAAGELPALERLRAHGTMEWLVDAGAPVHVLRAYRHATRRGQFASLEWLEDVFDGETPWDESIFAYAAESGNLA--LLDSLHADGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVAAKTEAEMAERGDVARLEWLHARGHAFQSPPDMWAVADFGTMRWLHKHRFPCDPRAMAAALERGDADAVRWLADEVGHGVCDYHACIAAAAGTP------------ARGGCAWDERVCTQARVNGHLDVLKWAVRKGC 468
[Close]
BLAST of jgi.p|Trimin1|175935 vs. uniprot
Match: A0A836CCJ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCJ3_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.570e-53
Identity = 97/139 (69.78%), Postives = 110/139 (79.14%), Query Frame = 1 
Query:  403 AAKTEADMAERGDVARLKWLRARGHAFQSPPDMWAVADFGTMRWLQQHRFPCDERAMAAALERGDADAVRWLVHEVGHAACDHHACIAAASAGDLASLAPLHAACRATGGGGHDADVCAAAAAGGHMDVLRWARGAGCA 819
            A KTE  MA RGDV+RL WLRARGH F SPPDMWAVADF TMRWL +H FPC+ +AM AAL  G+A+A+ WL++EVG +A D  AC+AAAS GD  SLA LH  CRATGGG HD +VCAAAAAGG+ DVLRWARG GCA
Sbjct:  220 AGKTEVAMAARGDVSRLDWLRARGHVFHSPPDMWAVADFSTMRWLHKHEFPCNAQAMHAAL--GNAEAMLWLLYEVGSSAWDGSACVAAASEGDPTSLALLHMTCRATGGG-HDQEVCAAAAAGGYGDVLRWARGEGCA 355
[Close]
BLAST of jgi.p|Trimin1|175935 vs. uniprot
Match: A0A835ZE15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE15_9STRA)

HSP 1 Score: 162 bits (411), Expect = 3.170e-42
Identity = 111/164 (67.68%), Postives = 116/164 (70.73%), Query Frame = 1 
Query:  472 GHAFQSPPDMWAVADFGTMRWLQQHRFPCDERAMAAALERGDADAVRWLVHEVGHAACDHHACIAAASAGDLASLAPLHAACRATGGGG-----HDADVCAAAAAGGHMDVLRWARGAGCAWDEXXXXXXXXXXXXXXXXXXXXQRCPCDVAELVYMMQHQRLS 948
            GH F SPP +WA AD  TMRWL  H   CD RAMAAALER DA A RWL++ VG AA DH AC+AAA AGDLASLAPLHAACRA GG       HD  VCAAAAAGGH  VLRWAR AGC    XXXXXXXXXXXXXXXXXXXX   PC  AEL  +   Q LS
Sbjct:  389 GHVFDSPPALWAAADLATMRWLHAHGLTCDARAMAAALERADATATRWLLYAVGGAAWDHRACVAAAFAGDLASLAPLHAACRAAGGXXXXXXXHDEAVCAAAAAGGHARVLRWARAAGCXXXXXXXXXXXXXXXXXXXXXXXXXXXPCGAAELQCLRALQTLS 552
[Close]
BLAST of jgi.p|Trimin1|175935 vs. uniprot
Match: A0A835YS69_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS69_9STRA)

HSP 1 Score: 159 bits (403), Expect = 3.080e-41
Identity = 104/177 (58.76%), Postives = 117/177 (66.10%), Query Frame = 1 
Query:  388 HGLPVAAKTEADMAERGDVARLKWLRARGHAFQSPPDMWAVADFGTMRWLQQHRFPCDERAMAAALERGDADAVRWLVHEVGHAACDHHACIAAASAGDLASLAPLHAACRATGGGGHDADVCAAAAAGGHMDVLRWARGAGCAWDEXXXXXXXXXXXXXXXXXXXXQRCPCDVAEL 918
            HGLPV+ K E  +A  GD  RL+WLR RGH F +PPDMWA  D    +WL  HRFP D RA    +     DAV W+++EVG  A D  +CIAAA  GD+ +L+ LH  CRATGGG HD         GGHMDVLRWARG  CAWD  XXXXXXXXXXXXXXXXXXX  CPC  AEL
Sbjct:  351 HGLPVSGKLEVKLALEGDDERLEWLRVRGHWFHNPPDMWAAGDNIVKQWLHDHRFPYDTRAAIGVI---GTDAVDWILYEVGSGAWDERSCIAAAFEGDMTALSLLHTTCRATGGG-HDXXXXXXXXXGGHMDVLRWARGEKCAWDGRXXXXXXXXXXXXXXXXXXXXXCPCGEAEL 523
[Close]
BLAST of jgi.p|Trimin1|175935 vs. uniprot
Match: A0A835YIJ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIJ4_9STRA)

HSP 1 Score: 132 bits (331), Expect = 5.590e-32
Identity = 129/347 (37.18%), Postives = 147/347 (42.36%), Query Frame = 1 
Query:    4 LADRGRLDVLQWGTDTHGFRPSAEVAMTAARSGQVQVLQWLHELMPWSAXXXXXXXXXXXXXXXXXXED---VFEDATXXXXXXXXXXXXXXXXXXXXXXREHECPWDERASRQAAVNGHV--------------------------QDEAFEW---AYGHGLPVAAKTEADMAERGDVARLKWLRARGHAFQSPPDMWAVADFGTMRWLQQHRFP-------CDERAMAAALERGDADAVRWLVHE---VGHAACDHHACIAAASAGDLASLAPLHAACRATGGGGHDADVCAAAAAGGHMDVLRWARGAGCAWDEXXXXXXXXXXXXXXXXXXXXQRCPCDVAEL 918
            LA++GRLDVLQWG D H F PSAEVA+ AAR G+V VLQWLHELMP+S                    +      D                        R H C WD  A   AA +G                            Q E+ EW    +  G        +  A  G V  L+WL A G                                  CD      A E    +A +W       VG  A D  +C+AAAS GDL +L+ LH  CRATGGG HD         GGH DVLRWA+G GCAWD XXXXXXXXXXXXXXXXXXXX   PC  AEL
Sbjct:   32 LAEQGRLDVLQWGRDAHNFCPSAEVAIAAARGGRVHVLQWLHELMPFSTQTTHSLLESAASSGQIDALNWVIAGHDWRGGGAPACAAAAAAGRLAALVHLRRHGCAWDHDAFEVAAAHGRTDVMDVLVSEDPPLSVDDAYRRAARCGQRESLEWLEVVFDGGTLWDENVFSCAAISGSVELLRWLHAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMALDVCD-----VAYEYDQFEAFKWAYSHGLPVGSGAWDERSCVAAASEGDLTALSLLHTTCRATGGG-HDEXXXXXXXXGGHADVLRWAQGEGCAWDXXXXXXXXXXXXXXXXXXXXXXXXPCGEAEL 372
[Close]
BLAST of jgi.p|Trimin1|175935 vs. uniprot
Match: A0A835ZCE3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCE3_9STRA)

HSP 1 Score: 127 bits (318), Expect = 9.350e-30
Identity = 72/121 (59.50%), Postives = 82/121 (67.77%), Query Frame = 1 
Query:  460 LRARGHAFQSPPDMWAVADFGTMRWLQQHRFPCDERAMAAALERGDADAVRWLVHEVGHAACDHHACIAAASAGDLASLAPLHAACRATGGGGHDADVCAAAAAGGHMDVLRWARGAGCAW 822
            L+  G   ++  +  A A  G  R    H FPCDERAM AAL  GDA AVR L+ +VG  A D  AC+AAA+AGDL SLA LHA CRATGGG HD DVC AAAAGG+ D +RWARG GCAW
Sbjct:  274 LQLMGDTVRAACNTAAGACAGCTRTDHAHGFPCDERAMHAALASGDAAAVRLLLFDVGSDAWDGSACVAAAAAGDLTSLALLHATCRATGGG-HDEDVCVAAAAGGYSDAMRWARGEGCAW 393
[Close]
BLAST of jgi.p|Trimin1|175935 vs. uniprot
Match: A0A835YXM8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXM8_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.030e-18
Identity = 79/113 (69.91%), Postives = 84/113 (74.34%), Query Frame = 1 
Query:  583 LERGDADAVRWLVHEVGHA-ACDHHACIAAASAGDLASLAPLHAACRATGGGGHDADVCAAAAAGGHMDVLRWARGAGCAWDEXXXXXXXXXXXXXXXXXXXXQRCPCDVAEL 918
            +ER D   + WL    GHA A D  +C AAA AGDL +LA LH  CRATGGG HDA+VCAAAAAGGH DVLRWARG GCAW  XXXXXXXXXXXXXXXXXXXX   PC  AEL
Sbjct:  271 VERDDVSRLEWL-RARGHATAWDERSCAAAAFAGDLTTLALLHTTCRATGGG-HDAEVCAAAAAGGHSDVLRWARGEGCAWXXXXXXXXXXXXXXXXXXXXXXXXXPCGEAEL 381
[Close]
BLAST of jgi.p|Trimin1|175935 vs. uniprot
Match: A0A836CMY9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMY9_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 2.430e-16
Identity = 83/228 (36.40%), Postives = 98/228 (42.98%), Query Frame = 1 
Query:    4 LADRGRLDVLQWGTDTHGFRPSAEVAMTAARSGQVQVLQWLHELMPWSAXXXXXXXXXXXXXXXXXXEDVF---EDATXXXXXXXXXXXXXXXXXXXXXXREHECPWDERASRQAAVNGHVQDEAFEWAYGHGLPVAAKTEADMAERGDVARLKWLRARGHAFQSPPDMWAVADFGTMRWLQQ---HRFPCDERAMAAALERGDADAVRWLVHEVGHAACDHHACIAA 669
            LA++GRLDVLQWG D H F PSA+VA+ AA  G V VLQWLHELMPWS                    D      D    XXXXXXXXXX          R     WD  A  +AA NG  Q E  EW     L +A    A +       R  W   R                 ++ WL+       P D    + A E GDA  +RWL +E G    DH + +AA
Sbjct:   32 LAEQGRLDVLQWGRDAHNFCPSADVAIAAACGGHVHVLQWLHELMPWSTHTTHSLLENAACSGQIDALDWLVAGHDWHGGXXXXXXXXXXAGELAALVRLRVQGSAWDHNAFEEAAANG--QTEVMEW-----LVIA---RAPLRVNDAYRRAAWCGQRA----------------SLEWLEDVFDRVTPWDANVFSRAAESGDAAQLRWL-YERGCPRDDHASRLAA 232
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|175935 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A835ZAT3_9STRA2.440e-182100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YTI3_9STRA4.940e-12354.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YTK1_9STRA3.890e-6841.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CCJ3_9STRA1.570e-5369.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZE15_9STRA3.170e-4267.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YS69_9STRA3.080e-4158.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YIJ4_9STRA5.590e-3237.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZCE3_9STRA9.350e-3059.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YXM8_9STRA1.030e-1869.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CMY9_9STRA2.430e-1636.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_131contigContig_131:167068..168357 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|175935|e_gw1.131.39.1
Hectar predicted targeting categoryother localisation
TranscriptId176257
TrackFilteredModels1
ProteinId175935
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|175935gene_13617Tribonema minus UTEX_B_3156 geneContig_131 167068..168357 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|175935Trimin1|175935|e_gw1.131.39.1Tribonema minus UTEX_B_3156 polypeptideContig_131 167068..168357 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13617_3exon_13617_3Tribonema minus UTEX_B_3156 exonContig_131 167068..167658 -
exon_13617_2exon_13617_2Tribonema minus UTEX_B_3156 exonContig_131 167734..167930 -
exon_13617_1exon_13617_1Tribonema minus UTEX_B_3156 exonContig_131 168195..168357 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13617CDS_13617Tribonema minus UTEX_B_3156 CDSContig_131 168195..168357 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13617 ID=mRNA_13617|Name=jgi.p|Trimin1|175935|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=951bp|location=Sequence derived from alignment at Contig_131:167068..168357- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTTGCTGACCGTGGCCGGCTCGATGTACTGCAGTGGGGCACAGACAC
TCATGGCTTCCGCCCCTCTGCAGAGGTGGCAATGACAGCGGCACGCAGCG
GTCAAGTGCAGGTCCTGCAGTGGCTGCACGAGCTCATGCCCTGGAGCGCA
GAGACGACCCACAATGCGGCGCGGCGCGGGCAGCGCGCATCGCTGGAGTG
GCTCGAAGATGTCTTTGAGGACGCGACGCCGTGGGACGCGAGCATCTTCG
CGCATGCTGCGGAGAGCGGCGATCTGGCGCTGCTGCACTGGCTCCGCGAG
CACGAGTGCCCGTGGGACGAACGCGCAAGCCGCCAGGCCGCCGTCAACGG
CCACGTCCAGGACGAGGCCTTCGAGTGGGCGTACGGCCACGGCCTGCCCG
TTGCGGCCAAGACGGAGGCAGATATGGCCGAGCGCGGCGACGTGGCGCGG
CTCAAGTGGCTGCGCGCCAGGGGGCACGCATTCCAGAGCCCCCCGGACAT
GTGGGCGGTTGCGGACTTCGGCACCATGCGGTGGCTGCAGCAGCACCGCT
TCCCTTGCGACGAGCGCGCCATGGCAGCGGCGCTCGAGCGCGGCGACGCC
GACGCGGTGCGCTGGCTGGTGCACGAGGTCGGCCACGCCGCGTGCGACCA
CCACGCTTGCATCGCTGCGGCCTCCGCGGGCGACCTGGCGTCGCTGGCGC
CGCTGCACGCGGCGTGCCGCGCGACGGGGGGCGGCGGGCACGACGCGGAC
GTCTGCGCGGCGGCGGCGGCGGGCGGGCACATGGACGTGCTGCGGTGGGC
GCGCGGCGCGGGGTGCGCGTGGGATGAGCGGGTGTGCGCGCAGGCGCGGG
CGAACGGGCATCTGGAGGTGCTCAGGTGGGCGGTCAGCCAGCGCTGCCCG
TGCGACGTGGCGGAGCTGGTGTACATGATGCAGCATCAGCGCCTGTCGTA
G
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protein sequence of jgi.p|Trimin1|175935

>Trimin1|175935|e_gw1.131.39.1 ID=Trimin1|175935|e_gw1.131.39.1|Name=jgi.p|Trimin1|175935|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=317bp
MLADRGRLDVLQWGTDTHGFRPSAEVAMTAARSGQVQVLQWLHELMPWSA
ETTHNAARRGQRASLEWLEDVFEDATPWDASIFAHAAESGDLALLHWLRE
HECPWDERASRQAAVNGHVQDEAFEWAYGHGLPVAAKTEADMAERGDVAR
LKWLRARGHAFQSPPDMWAVADFGTMRWLQQHRFPCDERAMAAALERGDA
DAVRWLVHEVGHAACDHHACIAAASAGDLASLAPLHAACRATGGGGHDAD
VCAAAAAGGHMDVLRWARGAGCAWDERVCAQARANGHLEVLRWAVSQRCP
CDVAELVYMMQHQRLS*
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mRNA from alignment at Contig_131:167068..168357-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13617 ID=mRNA_13617|Name=jgi.p|Trimin1|175935|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1290bp|location=Sequence derived from alignment at Contig_131:167068..168357- (Tribonema minus UTEX_B_3156 )
ATGCTTGCTGACCGTGGCCGGCTCGATGTACTGCAGTGGGGCACAGACAC
TCATGGCTTCCGCCCCTCTGCAGAGGTGGCAATGACAGCGGCACGCAGCG
GTCAAGTGCAGGTCCTGCAGTGGCTGCACGAGCTCATGCCCTGGAGCGCA
GAGACGACCCACAGTCTCCTGCACAATGCTGCGTTCTGCGGCCAGATCGG
CGCGCTCGATTGGCTCATTGCGGCGCATGACTGGCGCGGCGGCGGCGCTG
CGGCGTGCGCCGCTGCTGCTGCGGCGGGTGAGCTCACTGCGCTCCAGTTC
CTGCGCGCGCACGGCAGTTCGTGGAACGACACGACATTCTCCGAGGCCGC
AGCCAACGGGCAGATTTGAGTGATGGAGTGGCTCGTCAACGCCGGCGCGC
CGTTGAGGTTTTGCAGCGCCTACCAAGATGCGGCGCGGCGCGGGCAGCGC
GCATCGCTGGAGTGGCTCGAAGATGTCTTTGAGGACGCGACGCCGTGGGA
CGCGAGCATCTTCGCGCATGCTGCGGAGAGCGGCGATCTGGCGCTGCTGC
ACTGGCTCCGCGAGCACGAGTGCCCGTGGGACGAACGCGCAAGCCGCCAG
GCCGCCGTCAACGGCCACGTCCAGGTGCTGGAGTGACTGCTCGCTGCCGC
GGCGCCGCTTGCGCTCGACGTGTGCGACGTCGCGTACAGCAGCCACGAGG
ACGAGGCCTTCGAGTGGGCGTACGGCCACGGCCTGCCCGTTGCGGCCAAG
ACGGAGGCAGATATGGCCGAGCGCGGCGACGTGGCGCGGCTCAAGTGGCT
GCGCGCCAGGGGGCACGCATTCCAGAGCCCCCCGGACATGTGGGCGGTTG
CGGACTTCGGCACCATGCGGTGGCTGCAGCAGCACCGCTTCCCTTGCGAC
GAGCGCGCCATGGCAGCGGCGCTCGAGCGCGGCGACGCCGACGCGGTGCG
CTGGCTGGTGCACGAGGTCGGCCACGCCGCGTGCGACCACCACGCTTGCA
TCGCTGCGGCCTCCGCGGGCGACCTGGCGTCGCTGGCGCCGCTGCACGCG
GCGTGCCGCGCGACGGGGGGCGGCGGGCACGACGCGGACGTCTGCGCGGC
GGCGGCGGCGGGCGGGCACATGGACGTGCTGCGGTGGGCGCGCGGCGCGG
GGTGCGCGTGGGATGAGCGGGTGTGCGCGCAGGCGCGGGCGAACGGGCAT
CTGGAGGTGCTCAGGTGGGCGGTCAGCCAGCGCTGCCCGTGCGACGTGGC
GGAGCTGGTGTACATGATGCAGCATCAGCGCCTGTCGTAG
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Coding sequence (CDS) from alignment at Contig_131:167068..168357-

>mRNA_13617 ID=mRNA_13617|Name=jgi.p|Trimin1|175935|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=951bp|location=Sequence derived from alignment at Contig_131:167068..168357- (Tribonema minus UTEX_B_3156 )
ATGCTTGCTGACCGTGGCCGGCTCGATGTACTGCAGTGGGGCACAGACAC
TCATGGCTTCCGCCCCTCTGCAGAGGTGGCAATGACAGCGGCACGCAGCG
GTCAAGTGCAGGTCCTGCAGTGGCTGCACGAGCTCATGCCCTGGAGCGCA
GAGACGACCCACAATGCGGCGCGGCGCGGGCAGCGCGCATCGCTGGAGTG
GCTCGAAGATGTCTTTGAGGACGCGACGCCGTGGGACGCGAGCATCTTCG
CGCATGCTGCGGAGAGCGGCGATCTGGCGCTGCTGCACTGGCTCCGCGAG
CACGAGTGCCCGTGGGACGAACGCGCAAGCCGCCAGGCCGCCGTCAACGG
CCACGTCCAGGACGAGGCCTTCGAGTGGGCGTACGGCCACGGCCTGCCCG
TTGCGGCCAAGACGGAGGCAGATATGGCCGAGCGCGGCGACGTGGCGCGG
CTCAAGTGGCTGCGCGCCAGGGGGCACGCATTCCAGAGCCCCCCGGACAT
GTGGGCGGTTGCGGACTTCGGCACCATGCGGTGGCTGCAGCAGCACCGCT
TCCCTTGCGACGAGCGCGCCATGGCAGCGGCGCTCGAGCGCGGCGACGCC
GACGCGGTGCGCTGGCTGGTGCACGAGGTCGGCCACGCCGCGTGCGACCA
CCACGCTTGCATCGCTGCGGCCTCCGCGGGCGACCTGGCGTCGCTGGCGC
CGCTGCACGCGGCGTGCCGCGCGACGGGGGGCGGCGGGCACGACGCGGAC
GTCTGCGCGGCGGCGGCGGCGGGCGGGCACATGGACGTGCTGCGGTGGGC
GCGCGGCGCGGGGTGCGCGTGGGATGAGCGGGTGTGCGCGCAGGCGCGGG
CGAACGGGCATCTGGAGGTGCTCAGGTGGGCGGTCAGCCAGCGCTGCCCG
TGCGACGTGGCGGAGCTGGTGTACATGATGCAGCATCAGCGCCTGTCGTA
G
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