mRNA_13534 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|172289
Unique Name	mRNA_13534
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

[Close]

BLAST of jgi.p|Trimin1|172289 vs. uniprot
Match: A0A835YJ29_9STRA (Amine oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ29_9STRA)

HSP 1 Score: 1130 bits (2922), Expect = 0.000e+0
Identity = 578/578 (100.00%), Postives = 578/578 (100.00%), Query Frame = 1

Query:    1 MGENRRVIVVGAGISGLAAARELTQRGYEVTVLEGRDRPGGRTVSVDMGGSMVDLGAAFIHGVEGNPLSAIVKEMGLTPVPFEQCTLYQSDGWPADIREDRRVERIFNDVLERCHQAAVQHLEQRGRSFSDATAASREPAPGLSNTIGSGGSRRRPASTLKPSAGATAAXXXXXXXXSTPSGNGAAADGAVDSRNGVHSTVAAATGAAAGVEPAQPQRILPGRLDELLAQEGKSLLSGLSKGEQQLFNWHRGNLEIACGADLSELSAVHWNQDDRYQYEGDHVMLREGYGCLVKALSKRLDIRYQAEVKVIKLDTTAVKGVQATTADGRTFDADFLVCTLPLGVLKARAVRFDPVLPQAKTDSIRALGFGCLNKVVMLFPTVFWDTMDFIGHAADTRGQWVLFADLSRMTGQAVLVAMTGGPFATSIERLSDSGILQQIMAVLKRIYHKVPEPVKVEISRWKSDRFARGSFSFIAPDATAKDYDTLSEPLCDGFGVPRVLFAGEATTRYHPSTTTGAWLSGLREAMRIDMLVRPTKHKEPFDPDCVYDCSIRFPRVPHSERSPFTGAPSPCELKLTAT 1734
            MGENRRVIVVGAGISGLAAARELTQRGYEVTVLEGRDRPGGRTVSVDMGGSMVDLGAAFIHGVEGNPLSAIVKEMGLTPVPFEQCTLYQSDGWPADIREDRRVERIFNDVLERCHQAAVQHLEQRGRSFSDATAASREPAPGLSNTIGSGGSRRRPASTLKPSAGATAAXXXXXXXXSTPSGNGAAADGAVDSRNGVHSTVAAATGAAAGVEPAQPQRILPGRLDELLAQEGKSLLSGLSKGEQQLFNWHRGNLEIACGADLSELSAVHWNQDDRYQYEGDHVMLREGYGCLVKALSKRLDIRYQAEVKVIKLDTTAVKGVQATTADGRTFDADFLVCTLPLGVLKARAVRFDPVLPQAKTDSIRALGFGCLNKVVMLFPTVFWDTMDFIGHAADTRGQWVLFADLSRMTGQAVLVAMTGGPFATSIERLSDSGILQQIMAVLKRIYHKVPEPVKVEISRWKSDRFARGSFSFIAPDATAKDYDTLSEPLCDGFGVPRVLFAGEATTRYHPSTTTGAWLSGLREAMRIDMLVRPTKHKEPFDPDCVYDCSIRFPRVPHSERSPFTGAPSPCELKLTAT
Sbjct:    1 MGENRRVIVVGAGISGLAAARELTQRGYEVTVLEGRDRPGGRTVSVDMGGSMVDLGAAFIHGVEGNPLSAIVKEMGLTPVPFEQCTLYQSDGWPADIREDRRVERIFNDVLERCHQAAVQHLEQRGRSFSDATAASREPAPGLSNTIGSGGSRRRPASTLKPSAGATAAXXXXXXXXSTPSGNGAAADGAVDSRNGVHSTVAAATGAAAGVEPAQPQRILPGRLDELLAQEGKSLLSGLSKGEQQLFNWHRGNLEIACGADLSELSAVHWNQDDRYQYEGDHVMLREGYGCLVKALSKRLDIRYQAEVKVIKLDTTAVKGVQATTADGRTFDADFLVCTLPLGVLKARAVRFDPVLPQAKTDSIRALGFGCLNKVVMLFPTVFWDTMDFIGHAADTRGQWVLFADLSRMTGQAVLVAMTGGPFATSIERLSDSGILQQIMAVLKRIYHKVPEPVKVEISRWKSDRFARGSFSFIAPDATAKDYDTLSEPLCDGFGVPRVLFAGEATTRYHPSTTTGAWLSGLREAMRIDMLVRPTKHKEPFDPDCVYDCSIRFPRVPHSERSPFTGAPSPCELKLTAT 578

[Close]

BLAST of jgi.p|Trimin1|172289 vs. uniprot
Match: D7G6B2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6B2_ECTSI)

HSP 1 Score: 452 bits (1162), Expect = 1.190e-148
Identity = 259/573 (45.20%), Postives = 359/573 (62.65%), Query Frame = 1

Query:   16 RVIVVGAGISGLAAARELTQRGYEVTVLEGRDRPGGRTVSV---DMGGSMVDLGAAFIHGVEGNPLSAIVKEMGLTPVPFEQCTLYQSDGWPADIREDRRVERIFNDVLERCHQAAVQHLEQRGRSFSDATAASREPAPGLSNTIGSGGSRRRPASTLKPSAGATAAXXXXXXXXST---------PSGNGA----AADGAVDSRNGVHS-TVAAATGAAAGVEPAQ-PQRILPGRLDELLAQEGKSLLSGLSKGEQQLFNWHRGNLEIACGADLSELSAVHWNQDDRYQYEGDHVMLREGYGCLVKALSKRLDIRYQAEVKVIKLDTTAVKGVQATTADGR--TFDADFLVCTLPLGVLKARAVRFDPVLPQAKTDSIRALGFGCLNKVVMLFPTVFWDTMDFIGHAADTRGQWVLFADLSRMTGQAVLVAMTGGPFATSIERLSDSGILQQIMAVLKRIYHKVPEPVKVEISRWKSDRFARGSFSFIAPDATAKDYDTLSEPLCDGFGVPRVLFAGEATTRYHPSTTTGAWLSGLREAMRIDMLVRPTKHKEP-----FDPDCVYDCSIRF 1659
            +V+VVGAG++GL+AAREL+ RGY+V VLE   R GGR +S    + GG+ +DLGAAFIHG+E NP++A+ +E+GLT VP + CTL  +DG P     D+R++R++N VL+ C +   +H      +          P  G+    GS G   R   T + S G    XXXXXXXX           P G+G       D A +S+  V S  V  +        PA       P  L ++L +  +  L+  SK E ++++WHRGNLEI+CGADL+EL  +HWNQDD Y ++GDHV+++EGY  L   ++  LDIR   EVK+I+LD           ++G+  T  A ++V TLPLGVLKAR VRF P L  +K  +IR++G G LNK+V+ FP +FWD +DF+GHA   R +W+LF D+SR+TG+ +LVAM+GGPFA  IERL D+ I ++ M V++RIY   P+PV  + +RWK+ +F+RGSFSFI P  +A++YD L+EP+ D  G PRVLFAGE TT+YHPST  GAWL+GLREA R+D   R   H++      F PD +Y+ S+ F
Sbjct:    4 KVLVVGAGLAGLSAARELSHRGYDVIVLEATSRVGGRLLSAKVAETGGAAIDLGAAFIHGIEDNPVAALAQELGLTLVPMDDCTLLGNDGQPVPEAMDQRIQRLWNRVLDECAEKQ-KHSNNNNNTL---------PPSGM----GSAGDDSR-GETSEESHGEXXXXXXXXXXXXXXXXXXXXXXPDGDGTHKAVPIDAAQESKGPVGSGRVGGSVDRVVLQRPAHGTDSTAPASLGKVLEETARVHLASFSKSEMEVWDWHRGNLEISCGADLNELDHLHWNQDDEYDFDGDHVIIKEGYAALSSRVAATLDIRLNTEVKMIRLDDAQSNVEVVVNSEGKDTTLRAGYVVVTLPLGVLKARLVRFKPALQDSKLAAIRSMGMGTLNKLVLHFPRIFWDQVDFLGHAGKDRRKWLLFMDMSRVTGRPILVAMSGGPFAVLIERLGDAEITRRAMDVIRRIYPDAPDPVSSQTTRWKTSKFSRGSFSFIPPGCSAEEYDALAEPISDRRGKPRVLFAGEHTTKYHPSTVHGAWLTGLREATRLDSHARAGWHRKGKRDDIFSPDIMYETSVLF 561

[Close]

BLAST of jgi.p|Trimin1|172289 vs. uniprot
Match: A0A1W4W6H8_DROFC (Probable lysine-specific histone demethylase 1 n=7 Tax=melanogaster group TaxID=32346 RepID=A0A1W4W6H8_DROFC)

HSP 1 Score: 291 bits (744), Expect = 1.790e-84
Identity = 202/564 (35.82%), Postives = 290/564 (51.42%), Query Frame = 1

Query:   16 RVIVVGAGISGLAAARELTQRGYEVTVLEGRDRPGGRTVSVDMGGSMVDLGAAFIHGVEGNPLSAIVKEMGLTPVPFEQ-CTLYQSDGWPADIREDRRVERIFNDVLERC----HQAAVQHLEQRGRSFSDATA---------ASREPAPGLSNTIGSGGS---RRRPASTLKPSAGATAAXXXXXXXXSTPSGNGAAADGAVDSRNGVHSTVAAATGAAAGVEPAQPQRILPGRLDELLAQEGKSLLSGLSKGEQQLFNWHRGNLEIACGADLSELSAVHWNQDDRYQYEGDHVMLREGYGCLVKALSKRLDIRYQAEVKVIKLDTTAVKGVQA---TTADGRTFDADFLVCTLPLGVLK----------ARAVRFDPVLPQAKTDSIRALGFGCLNKVVMLFPTVFWD-TMDFIGHAADT---RGQWVLFADLSRMTGQAVLVAMTGGPFATSIERLSDSGILQQIMAVLKRIYHK--VPEPVKVEISRWKSDRFARGSFSFIAPDATAKDYDTLSEPLC-----DGFGVPRVLFAGEATTRYHPSTTTGAWLSGLREAMRI 1584
            +VIV+GAGISGLA A++L Q G +V VLE RDR GGR  +      + DLGA  + GV GNP++ + K++G+  VP +Q C LY  DG P    +D  +ER FN +LE      H+    +      S  DA              + A  +   I +       RR   TLK S     +          P G  +  +      N  ++ +     A    E  +  + +  +L EL       +   LS  ++ + +WH  NLE A    L+ LS  HW+QDD +++ G H  +R GY C+  AL++ LDIR  + VK IK  T  V+ V     T+    T+ AD  VCTL LGVLK          +  V+FDP LP  K  +IR LGFG LNKVV+ F  +FWD   +  GH   T   RG+  LF  +S      VL+A+  G  A  +E ++D  I+ + M+VLK I+    VP+P +  ++RW+SD +ARGS+S+++  ++  DYD L+ P+      +  G+PR+ FAGE T R +P+T  GA+LSGLREA RI
Sbjct:  260 KVIVIGAGISGLAVAQQLQQFGMDVIVLEARDRVGGRIATFRKNSYIADLGAMVVTGVYGNPMTILSKQIGMDLVPIQQTCPLYGPDGKPVPKEKDDVIEREFNRLLESASYLSHRLDFNYAGNCPVSLGDALEWIISMQEMQVMHKKAQHMQEIIAAQTKIIEHRRRLKTLKESIATLKSERQTMVKQRIPKGTESDVNYGRQEFNIRNTQIKLEEQAKLFSELHEEDKQMEAKLRELEQNRPSDVY--LSSRDRLILDWHFANLEFANATRLNNLSLKHWDQDDDFEFIGHHTTVRNGYSCVPVALTENLDIRVNSAVKEIKYGTNGVEVVAENLKTSNSQMTYKADLAVCTLTLGVLKVAVAHEESQQSNTVKFDPPLPDWKQQAIRRLGFGNLNKVVLCFDRIFWDPNANLFGHVGSTTSSRGEMFLFWSIS---SSPVLLALVAGMAANLVESVTDDIIIGRCMSVLKNIFGNTSVPQPKETVVTRWRSDPWARGSYSYVSVGSSGSDYDLLAAPVIPPSSKEAEGLPRLFFAGEHTIRNYPATVHGAYLSGLREAGRI 818

[Close]

BLAST of jgi.p|Trimin1|172289 vs. uniprot
Match: A0A1S4A7G7_TOBAC (lysine-specific histone demethylase 1 homolog 2-like n=4 Tax=Nicotiana TaxID=4085 RepID=A0A1S4A7G7_TOBAC)

HSP 1 Score: 286 bits (731), Expect = 1.490e-83
Identity = 191/542 (35.24%), Postives = 273/542 (50.37%), Query Frame = 1

Query:   19 VIVVGAGISGLAAARELTQRGYEVTVLEGRDRPGGRTVSVDMGG----SMVDLGAAFIHGVEGNPLSAIVKEMGLTPVPF-EQCTLYQSDGWPADIREDRRVERIFNDVLERCHQAAVQHLEQRGRSFSDATAASREPAPGLSNTIGSGGSRRRPASTLKPSAGATAAXXXXXXXXSTPSGNGAAADGAVDSRNGVHSTVAAATGAAAGVEPAQPQRILPGRLDELLAQEGKSLLSGLSKG--EQQLFNWHRGNLEIACGADLSELSAVHWNQDDRYQYEGDHVMLREGYGCLVKALSKRLDIRYQAEVKVIKLDTTAVKGVQATTADGRTFDADFLVCTLPLGVLKARAVRFDPVLPQAKTDSIRALGFGCLNKVVMLFPTVFW----DTMDFIGHAADTRGQWVLFADLSRMTGQAVLVAMTGGPFATSIERLSDSGILQQIMAVLKRIYH----KVPEPVKVEISRWKSDRFARGSFSFIAPDATAKDYDTLSEPLCDGFGVPRVLFAGEATTRYHPSTTTGAWLSGLREAMRIDMLVR 1599
            VI+VGAG++GLAAAR+L   G++V +LEGR+RPGGR  +  MG     + VDLG + I G+  NPL  + +++ +      ++C LY+ DG P D   D R+E IFN +L++     V  L              R+   GL+N I  G       S L                                                                 E+L Q     L  ++K   E+QL +WH  NLE A    LS+LSA +W+QDD Y+  GDH  L  G   +++AL K + I Y   V+ IK     V  +    A G+ F AD ++CT+PLGVLK R +RF+P LP+ K ++I  LGFG LNKV M+FP VFW    DT   + H +  RG++ LF     ++G  VL+A+  G  A   E    + ++ ++M++LK IY     +VP+P++   +RW SD F+ GS+S +   ++  DYD L+E L D     R+ FAGEAT R HP+T  GA+LSGLREA RI   ++
Sbjct:  163 VIIVGAGLAGLAAARQLMSFGFKVVILEGRNRPGGRVYTQKMGRKGKFAAVDLGGSVITGIHANPLGVLARQLSIPLHKVRDKCPLYKPDGAPVDAEIDSRIELIFNKLLDK-----VTEL--------------RKIVSGLANDISLG-------SVL-----------------------------------------------------------------EMLRQ-----LYTVAKTTEERQLLDWHFANLEYANAGCLSKLSAAYWDQDDPYEMGGDHCFLAGGNWGIIRALCKGVPIFYGKTVQTIKYGNEGVDVI----AGGQVFQADMVLCTVPLGVLKRRLIRFEPELPEKKLEAIDRLGFGLLNKVAMVFPHVFWGEDLDTFGCLNHYSHRRGEFFLFYSYHTVSGGPVLIALVAGDAAQLFESTEPATLINRVMSILKGIYEPKGIRVPDPIQSICTRWGSDPFSFGSYSHVRVQSSGSDYDVLAENLED-----RLFFAGEATIRQHPATMHGAYLSGLREASRISQSMK 599

[Close]

BLAST of jgi.p|Trimin1|172289 vs. uniprot
Match: A0A7L2V646_9AVES (KDM1A demethylase (Fragment) n=1 Tax=Brachypteracias leptosomus TaxID=135165 RepID=A0A7L2V646_9AVES)

HSP 1 Score: 280 bits (717), Expect = 2.940e-82
Identity = 197/575 (34.26%), Postives = 300/575 (52.17%), Query Frame = 1

Query:   16 RVIVVGAGISGLAAARELTQRGYEVTVLEGRDRPGGRTVSVDMGGSMVDLGAAFIHGVEGNPLSAIVKEMGLTPVPFEQ-CTLYQSDGWPADIREDRRVERIFNDVLERC----HQAAVQHLEQRGRSFSDATAA----------------------SREPAPGLSNT-------IGSGGSRRRPASTLKPSAGATAAXXXXXXXXSTPSGNGAAADGAVDSRNGVHSTVAAATGAAAGVEPAQPQRILPGRLDELLAQEGKSLLSGLSKGEQQLFNWHRGNLEIACGADLSELSAVHWNQDDRYQYEGDHVMLREGYGCLVKALSKRLDIRYQAEVKVIKLDTTAVKGVQATT-ADGRTF--DADFLVCTLPLGVLKAR--AVRFDPVLPQAKTDSIRALGFGCLNKVVMLFPTVFWD-TMDFIGHAADT---RGQWVLFADLSRMTGQAVLVAMTGGPFATSIERLSDSGILQQIMAVLKRIYHK--VPEPVKVEISRWKSDRFARGSFSFIAPDATAKDYDTLSEPLCDGFGVP-------RVLFAGEATTRYHPSTTTGAWLSGLREAMRI 1584
            +VI++G+G+SGLAAAR+L   G +VTVLE RDR GGR  +   G  + DLGA  + G+ GNP++ + K++ +     +Q C LY+++G      +D  VE+ FN +LE      HQ     L  +  S   A                         ++E    L N        I     + + AS +KP    TA                      V S+   H  + A   A+   E A+ Q  L  +L EL A     +   LS  ++Q+ +WH  NLE A    LS LS  HW+QDD +++ G H+ +R GY C+  AL++ LDI+    V+ ++   +  + +   T +  +TF    D ++CTLPLGVLK +  AV+F P LP+ KT +++ +GFG LNKVV+ F  VFWD +++  GH   T   RG+  LF +L +     +L+A+  G  A  +E +SD  I+ + +A+LK I+    VP+P +  +SRW++D +ARGS+S++A  ++  DYD +++P+  G  +P       R+ FAGE T R +P+T  GA LSGLREA RI
Sbjct:  109 KVIIIGSGVSGLAAARQLQSFGMDVTVLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKDLLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFL-------------------VKSK---HRDLTALCKASEYDELAETQGKLEEKLQELEANPPSDVY--LSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAP---ILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPAIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRI 656

[Close]

BLAST of jgi.p|Trimin1|172289 vs. uniprot
Match: A0A2U1LQY9_ARTAN (Flavin containing amine oxidoreductase family protein n=3 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1LQY9_ARTAN)

HSP 1 Score: 285 bits (728), Expect = 4.710e-82
Identity = 191/538 (35.50%), Postives = 263/538 (48.88%), Query Frame = 1

Query:   19 VIVVGAGISGLAAARELTQRGYEVTVLEGRDRPGGRTVSVDM-GGSMV---DLGAAFIHGVEGNPLSAIVKEM--GLTPVPFEQCTLYQSDGWPADIREDRRVERIFNDVLERCHQAAVQHLEQRGRSFSDATAASREPAPGLSNTIGSGGSRRRPASTLKPSAGATAAXXXXXXXXSTPSGNGAAADGAVDSRNGVHSTVAAATGAAAGVEPAQPQRILPGRL--DELLAQEGKSLLSGLSKGEQQLFNWHRGNLEIACGADLSELSAVHWNQDDRYQYEGDHVMLREGYGCLVKALSKRLDIRYQAEVKVIKLDTTAVKGVQATTADGRTFDADFLVCTLPLGVLKARAVRFDPVLPQAKTDSIRALGFGCLNKVVMLFPTVFWDT-MDFIGHAADT---RGQWVLFADLSRMTGQAVLVAMTGGPFATSIERLSDSGILQQIMAVLKRIYH----KVPEPVKVEISRWKSDRFARGSFSFIAPDATAKDYDTLSEPLCDGFGVPRVLFAGEATTRYHPSTTTGAWLSGLREAMRI 1584
            VIV+GAG+SGL AAR+L   GY+VTVLEGR R GGR  +  M GG+ V   DLG + + G  GNPL  + +++  GL  +  ++C LY  DG P D   D RVE  FN +L++                                                                                                    A   R+L G +  D  L    ++        E  LFNWH  NLE A    LS LS   W+QDD Y   GDH  L  G G LV+AL++ + I+Y+  V  I+  +    GVQ     G+ F+ D  +CT+PLGVLK+ +++F+P LPQ K D I+ LGFG LNKV MLFPT+FW T +D  GH +D    RG++ LF   + + G  VL+A+  G  A S E +  +  + +++ +L+ IY     +VPEP++   +RW SD F  GS+S +A  ++  DYD L+E + DG    R+ FAGEATTR +P+T  GA+LSGLREA  I
Sbjct:  145 VIVIGAGMSGLGAARQLMSFGYKVTVLEGRKRAGGRVYTKKMEGGNRVAFADLGGSVLTGTHGNPLGILARQLSYGLHKIR-DKCPLYGLDGKPVDGEVDARVELAFNQLLDK----------------------------------------------------------------------------------------------------ASKLRMLMGEVSQDVSLGAALETFWEADDLEETSLFNWHLANLEYANAGLLSRLSLAFWDQDDPYDMGGDHCFLPGGNGRLVQALAENVPIQYEKTVNAIRYGSD---GVQVVVNGGQVFEGDICLCTVPLGVLKSGSIKFNPELPQRKLDGIKRLGFGLLNKVAMLFPTLFWGTDLDMFGHLSDDPSRRGEFFLFYSYATVAGGPVLMALVAGEAAHSFESMPPTDAVTRVLQILRGIYEPQGIEVPEPIQTVCTRWGSDPFCLGSYSNVAVGSSGDDYDILAESVGDG----RLFFAGEATTRRYPATMHGAFLSGLREAANI 574

[Close]

BLAST of jgi.p|Trimin1|172289 vs. uniprot
Match: LSDA_DROME (Possible lysine-specific histone demethylase 1 n=17 Tax=melanogaster group TaxID=32346 RepID=LSDA_DROME)

HSP 1 Score: 284 bits (726), Expect = 7.630e-82
Identity = 196/575 (34.09%), Postives = 289/575 (50.26%), Query Frame = 1

Query:   16 RVIVVGAGISGLAAARELTQRGYEVTVLEGRDRPGGRTVSVDMGGSMVDLGAAFIHGVEGNPLSAIVKEMGLTPVPFEQ-CTLYQSDGWPADIREDRRVERIFNDVLERCHQAA---------------------------VQHLEQRGRSFSDATAASREPAPGLSNTIGSGGSRRRPASTLKPSAGATAAXXXXXXXXSTPSGNGAAADGAVDSRNGVHSTVAAATGAAAGVEPAQPQRILPGRLDELLAQEGKSLLSGLSKGEQQLFNWHRGNLEIACGADLSELSAVHWNQDDRYQYEGDHVMLREGYGCLVKALSKRLDIRYQAEVKVIKLDTTAVKGVQA---TTADGRTFDADFLVCTLPLGVLK----------ARAVRFDPVLPQAKTDSIRALGFGCLNKVVMLFPTVFWD-TMDFIGHAADT---RGQWVLFADLSRMTGQAVLVAMTGGPFATSIERLSDSGILQQIMAVLKRIYHK--VPEPVKVEISRWKSDRFARGSFSFIAPDATAKDYDTLSEPLC-----DGFGVPRVLFAGEATTRYHPSTTTGAWLSGLREAMRI 1584
            +VIV+GAGISGLA A +L Q G +V VLE RDR GGR  +      + D+GA  + GV GNP++ + K++G+  VP +Q C LY  DG P    +D  +ER FN +LE     +                           +Q + +RG+   +  A   +              +RR   TL+ + G              P G            N  ++ +      +   +    ++ +  +L EL       +   LS  ++ + +WH  NLE A    L+ LS  HW+QDD +++ G H  +R GY C+  AL++ LDIR  + VK IK  T  V+ V     T+    T+ AD +VCTL LGVLK          +  V+FDP LP  K  +I+ LGFG LNKVV+ F  +FWD   +  GH   T   RG+  LF  +S      VL+A+  G  A  +E ++D  I+ + M+VLK I+    VP+P +  ++RW+SD +ARGS+S+++  ++  DYD L+ P+      D  G+PR+ FAGE T R +P+T  GA+LSGLREA RI
Sbjct:  266 KVIVIGAGISGLAVAHQLQQFGMDVIVLEARDRVGGRISTFRKNSYIADVGAMVVTGVYGNPMTILSKQIGMDLVPIQQTCPLYGPDGKPVPKEKDDVIEREFNRLLESASYLSHRLDFNYAGDCPVSLGDALEWIISMQEMQVMHKRGQHMQEIIATQTKIIE-----------QRRRLKTLRDTIGKLKNEHLAMINQRKPKGTDGDLKYCYQEFNIRNTQIKMEETISTFHDLHAEEKQMLAKLHELEQNRPSDVY--LSSRDRLILDWHFANLEFANATRLNNLSLKHWDQDDDFEFIGHHTTVRNGYSCVPVALTENLDIRVNSAVKEIKYGTKGVEVVAENLKTSNSQMTYKADLVVCTLTLGVLKVAVAHKESQQSNTVKFDPPLPDWKQQAIKRLGFGNLNKVVLCFDRIFWDPNANLFGHVGSTTASRGEMFLFWSIS---SSPVLLALVAGMAANLVESVTDDIIIGRCMSVLKNIFGNTSVPQPKETVVTRWRSDPWARGSYSYVSVGSSGSDYDLLAAPVIPPSSKDAEGLPRLFFAGEHTIRNYPATVHGAYLSGLREAGRI 824

[Close]

BLAST of jgi.p|Trimin1|172289 vs. uniprot
Match: A0A3Q7IBD6_SOLLC (SWIRM domain-containing protein n=8 Tax=Solanum TaxID=4107 RepID=A0A3Q7IBD6_SOLLC)

HSP 1 Score: 281 bits (718), Expect = 1.030e-81
Identity = 183/540 (33.89%), Postives = 265/540 (49.07%), Query Frame = 1

Query:   19 VIVVGAGISGLAAARELTQRGYEVTVLEGRDRPGGRTVSVDMGG----SMVDLGAAFIHGVEGNPLSAIVKEMGLTPVPF-EQCTLYQSDGWPADIREDRRVERIFNDVLERCHQAAVQHLEQRGRSFSDATAASREPAPGLSNTIGSGGSRRRPASTLKPSAGATAAXXXXXXXXSTPSGNGAAADGAVDSRNGVHSTVAAATGAAAGVEPAQPQRILPGRLDELLAQEGKSLLSGLSKGEQQLFNWHRGNLEIACGADLSELSAVHWNQDDRYQYEGDHVMLREGYGCLVKALSKRLDIRYQAEVKVIKLDTTAVKGVQATTADGRTFDADFLVCTLPLGVLKARAVRFDPVLPQAKTDSIRALGFGCLNKVVMLFPTVFW----DTMDFIGHAADTRGQWVLFADLSRMTGQAVLVAMTGGPFATSIERLSDSGILQQIMAVLKRIYHK----VPEPVKVEISRWKSDRFARGSFSFIAPDATAKDYDTLSEPLCDGFGVPRVLFAGEATTRYHPSTTTGAWLSGLREAMRIDMLVR 1599
            VI++GAG++GLAAAR+L   G++VTVLEGR+RPGGR  S  MG     + VDLG + I G+  NPL  + +++ +      ++C LY+ DG P D   D  VE IFN +L                   D  A  R+   GL+  +                                                                            L  +L    +      +K E+QL +WH  NLE A    LSELSA +W+QDD Y+ +GDH  L  G   +++AL K + I Y   V+ IK      +GV+    D + F AD ++CT+PLGVLK R++RF+P LP+ K ++I  LGFG LNKV M+FP +FW    DT   + H +  RG++ LF     ++G  VL+A+  G  A   E    S ++ +++ +LK IY +    VP+P++   ++W SD F+ GS+S +   ++  DYD L+E L       R+ FAGEAT R HP+T  GA+LSGLREA  I   ++
Sbjct:  167 VIIIGAGLAGLAAARQLMAFGFKVTVLEGRNRPGGRVYSEKMGWKGKFAAVDLGGSVITGIHANPLGVLARQLSIPLHSVRDKCPLYKPDGAPVDSVVDSTVELIFNKLL-------------------DKVAELRKIVSGLATDVS---------------------------------------------------------------------------LGSVLETLRRLYCVAKTKEEKQLLHWHFANLEYANAGCLSELSAAYWDQDDPYEMDGDHCFLVGGNRAMIRALCKGVPIFYGKTVQTIKYGN---EGVEVIAGD-QLFQADMVLCTVPLGVLKRRSIRFEPELPEKKLEAIDRLGFGLLNKVAMVFPHIFWGEDLDTFGCLNHHSHRRGEYFLFYSYHTVSGGPVLIALVAGDAAQLFESTDPSTLINRVINILKGIYEQKGISVPDPIQSICTKWGSDPFSFGSYSHVRVQSSGSDYDILAENLGG-----RLFFAGEATIRQHPATMHGAYLSGLREASHISQSMK 603

[Close]

BLAST of jgi.p|Trimin1|172289 vs. uniprot
Match: A0A2G2Z5H5_CAPAN (lysine-specific histone demethylase 1 homolog 2 n=4 Tax=Capsicum TaxID=4071 RepID=A0A2G2Z5H5_CAPAN)

HSP 1 Score: 280 bits (717), Expect = 1.440e-81
Identity = 189/540 (35.00%), Postives = 267/540 (49.44%), Query Frame = 1

Query:   19 VIVVGAGISGLAAARELTQRGYEVTVLEGRDRPGGRTVSVDMGG----SMVDLGAAFIHGVEGNPLSAIVKEMGLTPVPF-EQCTLYQSDGWPADIREDRRVERIFNDVLERCHQAAVQHLEQRGRSFSDATAASREPAPGLSNTIGSGGSRRRPASTLKPSAGATAAXXXXXXXXSTPSGNGAAADGAVDSRNGVHSTVAAATGAAAGVEPAQPQRILPGRLDELLAQEGKSLLSGLSKGEQQLFNWHRGNLEIACGADLSELSAVHWNQDDRYQYEGDHVMLREGYGCLVKALSKRLDIRYQAEVKVIKLDTTAVKGVQATTADGRTFDADFLVCTLPLGVLKARAVRFDPVLPQAKTDSIRALGFGCLNKVVMLFPTVFW----DTMDFIGHAADTRGQWVLFADLSRMTGQAVLVAMTGGPFATSIERLSDSGILQQIMAVLKRIYH----KVPEPVKVEISRWKSDRFARGSFSFIAPDATAKDYDTLSEPLCDGFGVPRVLFAGEATTRYHPSTTTGAWLSGLREAMRIDMLVR 1599
            VI++GAG++GLAA R+L   G++V +LEGR+RPGGR  +  MGG    + VDLG + I G+  NPL  + +++ +      ++C LY+  G P D   D RVE IFN +L++     V  L              R+   GL+N I  G       S L+                                                         IL    D     E           E+QL +WH  NLE A    LSELSA +W+QDD Y+  GDH  L  G   +++AL K + I Y   V+ IK      +GV+    D + F AD ++CT+PLGVLK R++RF+P LP+ K ++I  LGFG LNKV ++FP VFW    DT   + H +  RG++ LF     ++G  VL+A+  G  A   E    S ++ ++M +LK IY      VP+P++   +RW SD F  GS+S +   ++  DYD L+E L       R+ FAGEAT R HP+T  GA+LSGLREA RI   ++
Sbjct:  163 VIIIGAGLAGLAAGRQLMSFGFKVVILEGRNRPGGRVYTQKMGGKGKFAAVDLGGSVITGIHANPLGVLARQLSIPLHKVRDKCPLYKPGGAPVDAEIDSRVELIFNKLLDK-----VTEL--------------RKLVSGLANDISLG-------SVLE---------------------------------------------------------ILRQLYDVAKTTE-----------EKQLLDWHFANLEYANAGCLSELSATYWDQDDPYEMGGDHCFLAGGNWGIIRALCKGVPILYGKTVQTIKYGN---EGVEVIAGD-QLFQADMVLCTVPLGVLKRRSIRFEPELPEKKLEAIDRLGFGLLNKVAIVFPHVFWGEDLDTFGCLNHYSHRRGEFFLFYSYHTVSGGPVLIALVAGDAAQFFESTEPSTLIHRVMNILKGIYEPKGISVPDPIQSICTRWGSDPFTFGSYSHVRVQSSGSDYDILAENLGG-----RLFFAGEATIRQHPATMHGAYLSGLREASRISQSMK 599

[Close]

BLAST of jgi.p|Trimin1|172289 vs. uniprot
Match: A0A6P4L4M7_DROBP (Probable lysine-specific histone demethylase 1 n=3 Tax=ananassae subgroup TaxID=32347 RepID=A0A6P4L4M7_DROBP)

HSP 1 Score: 283 bits (723), Expect = 2.010e-81
Identity = 199/564 (35.28%), Postives = 290/564 (51.42%), Query Frame = 1

Query:   16 RVIVVGAGISGLAAARELTQRGYEVTVLEGRDRPGGRTVSVDMGGSMVDLGAAFIHGVEGNPLSAIVKEMGLTPVPFEQ-CTLYQSDGWPADIREDRRVERIFNDVLERC----HQAAVQHLEQRGRSFSDATA---------ASREPAPGLSNTIGSGGS---RRRPASTLKPSAGATAAXXXXXXXXSTPSGNGAAADGAVDSRNGVHSTVAAATGAAAGVEPAQPQRILPGRLDELLAQEGKSLLSGLSKGEQQLFNWHRGNLEIACGADLSELSAVHWNQDDRYQYEGDHVMLREGYGCLVKALSKRLDIRYQAEVKVIKLDTTAVKGVQA---TTADGRTFDADFLVCTLPLGVLK----------ARAVRFDPVLPQAKTDSIRALGFGCLNKVVMLFPTVFWD-TMDFIGHAADT---RGQWVLFADLSRMTGQAVLVAMTGGPFATSIERLSDSGILQQIMAVLKRIYHK--VPEPVKVEISRWKSDRFARGSFSFIAPDATAKDYDTLSEPLC-----DGFGVPRVLFAGEATTRYHPSTTTGAWLSGLREAMRI 1584
            +VIV+GAGISGLA A++L Q G +V VLE RDR GGR  +      + DLGA  + GV GNP++ + K++G+  VP +Q C LY  DG P    +D  +ER FN +LE      H+    +      S  DA              + A  +   I +       R+   ++K +     +          P G    A  A    N  ++ +          E  +  + L  +L EL       +   LS  ++ + +WH  NLE A    L+ LS  HW+QDD +++ G H  +R GY C+  AL++ LDIR  + VK IK  T  V+ V     T+    ++ AD +VCTL LGVLK          +  V+FDP LP  K  +IR LGFG LNKVV+ F  +FWD   +  GH   T   RG+  LF  +S      VL+A+  G  A  +E ++D  I+ + M+VLK I+    VP+P +  ++RW+SD +ARGS+S+++  ++  DYD L+ P+      +  G+PR+ FAGE T R +P+T  GA+LSGLREA RI
Sbjct:  266 KVIVIGAGISGLAVAQQLQQFGMDVIVLEARDRVGGRIATFRKNSYIADLGAMVVTGVYGNPMTILSKQIGMDLVPIQQTCPLYGPDGKPVAKEKDDVIEREFNRLLESASYLSHRLDFNYAGNCPVSLGDALEWIISMQEMQVMNKRAVHMQEIIAAQTKIIEHRQRLKSVKQNIANLKSEHQALLKQRLPKGTANVATYARQEFNKRNTQIKLEDTIKLYGELHEEDKRLEAKLRELEQNRPSDVY--LSSRDRLILDWHFANLEFANATRLNNLSLKHWDQDDDFEFIGHHTTVRNGYSCVPVALTENLDIRVNSAVKEIKYGTQGVEVVAENLKTSNSLMSYKADLVVCTLTLGVLKLAVAHEESQQSNTVKFDPPLPDWKQQAIRRLGFGNLNKVVLCFDRIFWDPNANLFGHVGSTTSSRGEMFLFWSIS---SSPVLLALVAGMAANIVESVTDDIIIGRCMSVLKNIFGNTSVPQPKETVVTRWRSDPWARGSYSYVSVGSSGSDYDLLAAPVIPPTCKEPEGLPRLFFAGEHTIRNYPATVHGAYLSGLREAGRI 824

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|172289 vs. uniprot

BLAST of jgi.p|Trimin1|172289 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YJ29_9STRA	0.000e+0	100.00	Amine oxidase n=1 Tax=Tribonema minus TaxID=303371...	[more]
D7G6B2_ECTSI	1.190e-148	45.20	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A1W4W6H8_DROFC	1.790e-84	35.82	Probable lysine-specific histone demethylase 1 n=7...	[more]
A0A1S4A7G7_TOBAC	1.490e-83	35.24	lysine-specific histone demethylase 1 homolog 2-li...	[more]
A0A7L2V646_9AVES	2.940e-82	34.26	KDM1A demethylase (Fragment) n=1 Tax=Brachypteraci...	[more]
A0A2U1LQY9_ARTAN	4.710e-82	35.50	Flavin containing amine oxidoreductase family prot...	[more]
LSDA_DROME	7.630e-82	34.09	Possible lysine-specific histone demethylase 1 n=1...	[more]
A0A3Q7IBD6_SOLLC	1.030e-81	33.89	SWIRM domain-containing protein n=8 Tax=Solanum Ta...	[more]
A0A2G2Z5H5_CAPAN	1.440e-81	35.00	lysine-specific histone demethylase 1 homolog 2 n=...	[more]
A0A6P4L4M7_DROBP	2.010e-81	35.28	Probable lysine-specific histone demethylase 1 n=3...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_91	contig	Contig_91:592405..597653 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|172289\|e_gw1.91.85.1
Description	oxidoreductase activity
COG category	E
Max annot lvl	2759\|Eukaryota
EggNOG OGs	COG1231@1\|root,KOG0029@2759\|Eukaryota
Evalue	1.96e-149
Seed ortholog	2880.D7G6B2
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Amine oxidase domain protein
Ec32 ortholog	Ec-10_001210.1
TranscriptId	172611
Track	FilteredModels1
ProteinId	172289

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|172289	gene_13534	Tribonema minus UTEX_B_3156	gene	Contig_91 592405..597653 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|172289	Trimin1\|172289\|e_gw1.91.85.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_91 592405..597653 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_13534_1	exon_13534_1	Tribonema minus UTEX_B_3156	exon	Contig_91 592405..592588 +
exon_13534_2	exon_13534_2	Tribonema minus UTEX_B_3156	exon	Contig_91 592931..593661 +
exon_13534_3	exon_13534_3	Tribonema minus UTEX_B_3156	exon	Contig_91 595054..595361 +
exon_13534_4	exon_13534_4	Tribonema minus UTEX_B_3156	exon	Contig_91 596523..596743 +
exon_13534_5	exon_13534_5	Tribonema minus UTEX_B_3156	exon	Contig_91 597361..597653 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_13534	CDS_13534	Tribonema minus UTEX_B_3156	CDS	Contig_91 592405..592588 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_91:592405..597653+
coding sequence from alignment at Contig_91:592405..597653+

spliced messenger RNA

>mRNA_13534 ID=mRNA_13534|Name=jgi.p|Trimin1|172289|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1737bp|location=Sequence derived from alignment at Contig_91:592405..597653+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGTGAGAATAGGCGGGTCATCGTTGTGGGCGCAGGCATCAGTGGTCT
TGCTGCTGCTCGCGAGCTCACCCAGCGGGGCTATGAGGTTACTGTGTTGG
AGGGCCGAGACAGGCCAGGCGGACGCACTGTATCTGTGGACATGGGAGGA
TCCATGGTTGATCTTGGAGCCGCATTCATTCACGGCGTGGAGGGCAATCC
CTTGAGCGCCATCGTCAAAGAAATGGGTTTGACACCGGTACCATTTGAGC
AGTGCACACTCTATCAGTCAGACGGCTGGCCCGCCGACATCAGAGAAGAC
AGGCGTGTGGAGCGCATCTTCAATGATGTGCTCGAAAGATGTCACCAGGC
AGCGGTGCAGCACTTGGAGCAGCGGGGGAGGAGTTTCTCAGACGCCACGG
CCGCCAGCCGTGAACCAGCGCCTGGCCTCAGCAACACCATCGGTTCTGGT
GGCAGTAGGCGCAGGCCTGCGTCAACACTCAAGCCGTCTGCTGGTGCCAC
AGCCGCCACAGCTGCAGCAGCTGGTGCCGCTTCAACCCCCAGCGGCAATG
GCGCAGCTGCGGATGGCGCTGTCGACAGCCGCAACGGTGTACACAGTACT
GTCGCAGCAGCAACTGGCGCCGCTGCTGGTGTCGAACCAGCGCAGCCGCA
GCGGATCCTGCCGGGCCGCTTGGACGAGCTGCTAGCGCAGGAAGGCAAGT
CACTGCTCAGTGGTCTTTCCAAGGGCGAGCAGCAGCTCTTCAACTGGCAC
AGGGGGAACCTGGAGATTGCATGCGGCGCGGATCTCAGCGAGCTGAGCGC
TGTGCACTGGAACCAGGACGATCGGTACCAGTACGAGGGGGACCACGTGA
TGCTGAGGGAGGGGTATGGGTGCTTGGTGAAGGCGCTATCCAAGCGCTTG
GACATTCGATACCAGGCGGAGGTTAAAGTCATCAAACTGGACACCACGGC
TGTCAAGGGCGTGCAAGCCACCACAGCAGACGGCCGCACCTTCGACGCTG
ACTTCCTGGTGTGCACGCTGCCGCTGGGAGTGCTCAAGGCACGCGCAGTG
CGATTTGATCCCGTGCTGCCGCAAGCGAAGACTGACAGCATCCGCGCCCT
GGGGTTCGGGTGTCTCAACAAGGTCGTCATGCTGTTTCCTACCGTGTTCT
GGGACACTATGGACTTCATTGGCCATGCGGCGGACACGCGAGGGCAGTGG
GTACTGTTTGCTGACCTGAGCAGGATGACTGGGCAGGCGGTGCTGGTGGC
CATGACTGGCGGCCCATTCGCAACATCAATCGAGCGGCTCTCTGACAGTG
GCATCCTACAGCAGATCATGGCCGTGCTCAAACGCATCTATCACAAGGTG
CCGGAGCCCGTCAAGGTGGAGATCAGCCGTTGGAAGAGCGACCGGTTTGC
CAGGGGTTCATTCAGCTTCATTGCACCGGATGCCACAGCAAAAGACTACG
ACACCCTGTCAGAGCCTCTGTGCGACGGGTTCGGAGTCCCGCGCGTCCTC
TTTGCGGGCGAGGCCACCACCCGCTACCACCCCTCCACCACCACTGGCGC
CTGGCTCAGCGGCCTGAGGGAGGCCATGCGCATTGACATGCTGGTCCGTC
CCACCAAGCACAAGGAGCCGTTTGATCCAGACTGCGTCTACGACTGCTCC
ATCCGCTTCCCGCGAGTGCCACACAGCGAGCGGTCGCCCTTCACCGGCGC
GCCATCTCCATGTGAGTTGAAGTTGACAGCCACGTAG

protein sequence of jgi.p|Trimin1|172289

>Trimin1|172289|e_gw1.91.85.1 ID=Trimin1|172289|e_gw1.91.85.1|Name=jgi.p|Trimin1|172289|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=579bp
MGENRRVIVVGAGISGLAAARELTQRGYEVTVLEGRDRPGGRTVSVDMGG
SMVDLGAAFIHGVEGNPLSAIVKEMGLTPVPFEQCTLYQSDGWPADIRED
RRVERIFNDVLERCHQAAVQHLEQRGRSFSDATAASREPAPGLSNTIGSG
GSRRRPASTLKPSAGATAATAAAAGAASTPSGNGAAADGAVDSRNGVHST
VAAATGAAAGVEPAQPQRILPGRLDELLAQEGKSLLSGLSKGEQQLFNWH
RGNLEIACGADLSELSAVHWNQDDRYQYEGDHVMLREGYGCLVKALSKRL
DIRYQAEVKVIKLDTTAVKGVQATTADGRTFDADFLVCTLPLGVLKARAV
RFDPVLPQAKTDSIRALGFGCLNKVVMLFPTVFWDTMDFIGHAADTRGQW
VLFADLSRMTGQAVLVAMTGGPFATSIERLSDSGILQQIMAVLKRIYHKV
PEPVKVEISRWKSDRFARGSFSFIAPDATAKDYDTLSEPLCDGFGVPRVL
FAGEATTRYHPSTTTGAWLSGLREAMRIDMLVRPTKHKEPFDPDCVYDCS
IRFPRVPHSERSPFTGAPSPCELKLTAT*

mRNA from alignment at Contig_91:592405..597653+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_13534 ID=mRNA_13534|Name=jgi.p|Trimin1|172289|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5249bp|location=Sequence derived from alignment at Contig_91:592405..597653+ (Tribonema minus UTEX_B_3156 )
ATGGGTGAGAATAGGCGGGTCATCGTTGTGGGCGCAGGCATCAGTGGTCT
TGCTGCTGCTCGCGAGCTCACCCAGCGGGGCTATGAGGTTACTGTGTTGG
AGGGCCGAGACAGGCCAGGCGGACGCACTGTATCTGTGGACATGGGAGGA
TCCATGGTTGATCTTGGAGCCGCATTCATTCACGGTGAGCGACAAGTAAG
CTGCCAGTTCCACGCACACACCTTCCAATCAAAGTTGAAGTTGCTGATTT
TTGCCGTGCTTGAGGCCTGCCTAGCTGTGTGTGATAAGCCGTGCAGTATG
AGTTTATATTCACGAGTTTTTATGTTGCTGAAGGTTCTAGTCAGCTGCGA
TCTGGTTGACGTCGATCGCGTGGTCGTCAATCACGGATTTCATTCCTGTG
TCTCTCCGGCGACGTGAGGACCTGGGGATGCAATGCTAGGCAGCACTATT
GCTCACGCCTGGAAGTATTAATGTCAGAATCTGAGGCATTAATGACGGGC
GCTGCTTACCACTTGCCTTGCCTCAGGCGTGGAGGGCAATCCCTTGAGCG
CCATCGTCAAAGAAATGGGTTTGACACCGGTACCATTTGAGCAGTGCACA
CTCTATCAGTCAGACGGCTGGCCCGCCGACATCAGAGAAGACAGGCGTGT
GGAGCGCATCTTCAATGATGTGCTCGAAAGATGTCACCAGGCAGCGGTGC
AGCACTTGGAGCAGCGGGGGAGGAGTTTCTCAGACGCCACGGCCGCCAGC
CGTGAACCAGCGCCTGGCCTCAGCAACACCATCGGTTCTGGTGGCAGTAG
GCGCAGGCCTGCGTCAACACTCAAGCCGTCTGCTGGTGCCACAGCCGCCA
CAGCTGCAGCAGCTGGTGCCGCTTCAACCCCCAGCGGCAATGGCGCAGCT
GCGGATGGCGCTGTCGACAGCCGCAACGGTGTACACAGTACTGTCGCAGC
AGCAACTGGCGCCGCTGCTGGTGTCGAACCAGCGCAGCCGCAGCGGATCC
TGCCGGGCCGCTTGGACGAGCTGCTAGCGCAGGAAGGCAAGTCACTGCTC
AGTGGTCTTTCCAAGGGCGAGCAGCAGCTCTTCAACTGGCACAGGGGGAA
CCTGGAGATTGCATGCGGCGCGGATCTCAGCGAGCTGAGCGCTGTGCACT
GGAACCAGGACGATCGGTACCAGTACGAGGGGGACCACGTGATGCTGAGG
GAGGGGTATGGGTGCTTGGTGAAGGCGCTATCCAAGCGCTTGGACATTCG
ATACCAGGTATGGAACTAGCTGGTCATACATCCTTGTTTTCATTAGTGAA
GGTGCATGGTGTGAGTCTATCAACAATGATCAGTACGGGTTCTGACCTGC
AGATTGGGCCGTCGCCATATGTGCATGCACACAGCTCTGAGCAAGCTTTT
CAACAAAACATGTGGGCTCTGCCATCGCAGAATACGTTTCACCTCACACA
AGTCGTGTATACATACCAGGCTGTTTCTGTCGTGACTGTCGTCATGGTGG
ATTATCCGCAATCTGGTATGGTTGCAATTTTTGCACATGCCGCCTGCGTT
GGAATTGAAACCCAATTCGCCATTCATTGCAGTTTACCAAAGCAGTGGTC
TACAGCTGTGCATCGGGTGCGAGTATCAATGTAGCTAGCTCAGCAATGAT
TCAATCTTTGGGCAGATCTTTATCGGAATGTAGACGACTGCGCGCTTGCA
AGTATGAATTCTGCCAGTTGCAGCGCTCAACCGCTGCTGAATGGCTATGT
TGCAGCACGTAGAGGCAGCCTCACAATGGCAAGTCCTCTGCACCCTGATG
TAAATACACTGTCCTTCAAATTGCAAGACAGAAGAGAAAGTGTTGCGCCG
GACAAGTACTTGTAGTACTGCTGCGAGACACGACTCGTGACTACATGACA
GTTGCAGACTCGCACACTAGCTTTGGCTGCTGGTCATTGGCGGCATGCTC
GTCAGTCATTGGCCACGTGAATTCATGAACTTGCATCAGCTTAGACTTTG
GTGGACCATGTGATCCCCCTGTAGGCAACGCGCACCTTGAAGGTGGACTC
CGTCTGTTTGGTCCATAGTCAGGTTGATGACAACCAGCACAATGCTTGCT
CATAATGAAGACCTGCAATAGGGTTTTACAAGTCACCCTTCAGGCAGGTG
GACTACTTTGTATCGTCTATTTACGCTGATCAAGTGTCAATTCACACAGC
ACGCAGTCACTTGATAATCAGGCGCGTCACCCGTTGGTGATGCTGCCTGT
TGGTGATGCGAGCAGCTACATACCATCGCATGCACTGTGCAGTGCCTCAA
AGTATGAATGGCACTGGAGGAAGATCAATAGCAGTCTGGTCTGTAAGATA
ATACATCCTTCAAACATCTGTCATGAGTGGTCATTTCGTGCACCGCAACT
GTACATGCGCAGAATGTTGCAAACACCTGACTGTGTGCAACCTGCATCAA
TGCTGAGTCGGCTTGGCGACTTTGCACCGTTTTGGCAACCCTAACCCTAA
TTTTCACCCTAACCTGACCCTAATCCCCACGTCTACGAACCAACTCTAAC
CTCACTCTGAACCCTAAGGTTTGAGATAAAAAGTGTATGGTTTCTAGAGT
AAGGCATCAATTGCAATCATGACGCGTCGCCACTGTTTCTTCTCTCCAGG
CGGAGGTTAAAGTCATCAAACTGGACACCACGGCTGTCAAGGGCGTGCAA
GCCACCACAGCAGACGGCCGCACCTTCGACGCTGACTTCCTGGTGTGCAC
GCTGCCGCTGGGAGTGCTCAAGGCACGCGCAGTGCGATTTGATCCCGTGC
TGCCGCAAGCGAAGACTGACAGCATCCGCGCCCTGGGGTTCGGGTGTCTC
AACAAGGTCGTCATGCTGTTTCCTACCGTGTTCTGGGACACTATGGACTT
CATTGGCCATGCGGCGGACACGCGAGGGCAGTGGGTACTGTTTGCTGACC
TGAGCAGGTGAGAATGCCACTATAGGTACAAGCAGTTGCACTAAAATCCA
CGTGTGTACCACGACTTGCAGATTACACTGTCGTAATGCGCATAGATTCA
CTCCCAGCTTTTGAAGGGTCGGGGCGAGGGTTGAGAGGTTCAAGGGTCAA
GCGCTGATGCACGCATACTTGTACCACATGAACGTGTCAGGACAGCCATT
TGCTAGTGCAACTACTCTAGGCCGATCCGTTCTGAAGTGCAATTTGTGCT
TGACTGCATGGCTTTGGTTTGCCAACAGCGATGACCAGTACGGTGACAAA
CTTTTCTCACGTATCAATTGATGTACTCTGCAGCAAGATATGCACGTAAA
TTACCTCTGTGTTGATTCTTTAGGCAGTTGGCGTTAAATTGACGTCTTGG
GTGTGACGATGGTTGCGCGCACGATTTTAGTTCAAAGTATACAATTAATG
AACACCTTTGAACTACGGTATGGCGAAGAAGGCATACACTGAGTTTCAAT
GAGAGTTGTAAGGTCACCTACACTGGCAGGCTCATGGCCTCAACATTGCG
CGCGGCGTGTTGAAGTTTTCTCATCATGTGCTGCGTTGAAGTTGACGCAT
CAGGAGGCATGTTGCGTGGCGTTGTGGCCTTTTGTTGCTGTAATCTCGTT
CACTGTGGTGGTAGTTGTTGATATGCAATTCCTTGTGGACCAGCATGAGA
CTGTAGATGCCGAACATACTTTTCAGCCCTTCCCACCATATTCCTGTCGT
AATTCTTACACCTCCCATGTGCATATCCAGCATGCACACAAGCGGCGAAT
CGCGTTCAAGTGTCTCGTGTAGTGCACTCTGTGTGGTTGGCTTGTTGCCG
TGCATACTAATTTGCAGGGCACAACGCTGTCCTTCATGACAGAGGAGCAC
TTTTGCCCACTGGAAGGTGAACTTTTACACATGTTGCCATGATCTATGGC
TTTCACCCCGCCCATTGCGCATGGGTCTTCGATGCAGCACCCTGTTGAGC
AAGTGCTGGTCATGAAGCATGCGCTTGGAGTGCTGGTCATGTTGCCTGAC
CATATGCACAGATAGCCAACCCTTTAACCTCGAATTACAAATGTTACTAT
AAAGGCGACTCCACACATGCGCCCGACAAATATTCTGGCATTGTTTCATG
TGCTGCCTGACGCTGCAGGATGACTGGGCAGGCGGTGCTGGTGGCCATGA
CTGGCGGCCCATTCGCAACATCAATCGAGCGGCTCTCTGACAGTGGCATC
CTACAGCAGATCATGGCCGTGCTCAAACGCATCTATCACAAGGTGCCGGA
GCCCGTCAAGGTGGAGATCAGCCGTTGGAAGAGCGACCGGTTTGCCAGGG
GTTCATTCAGCTTCATTGCACCGGATGCCACAGCAAAAGGTGAGAGACTA
GGCACGTGATTATCGCAGTAGTCTGACCAGTATCGTGTTGGAGGTGACCT
GGCAGACTGCAATCAGCACAATTCACTGCTGAATACAACTGGACTGCTGA
ATACAACTGGATCGATTATCGCAAGGCTATTGTTTCATACTGGTATCCAA
CAAATCATGGATGGTGGTCGTGTCGGCCATGTGTCTGGCGGTAGAGCTGC
TCACGATCTCTGCTTTGACGATGCCAACCAATCTGCCTGCACAACACACG
CAGCTTCGTGCCGCATGCCAATTTCTGCACAACAAGCCCACTAGCGGTTA
CGCTGTCCTTTTTGACACCTGTGTGAATCAGGTGACCAGAAGGCAGAGCT
TTGGTGCATTAACATTGCCAATTACGTTGGCAGCTTCATACTATGTGTGC
TGTTGGCAGCGTGAACACTTAGTTTTGGTTCACCACTATTGCATTTAGTG
ACACATAGAGCACATGGACGCGTGCGCACCTTGAGCACCAACCTGCAGCA
GCAATCAGCAAACCTGCTGATGACCAATGAAATGCTTTAACGGCTTATAT
GAAGTGATTTTTTATCGGCTTATGTGCTGCTGTCCTTTTCTTCACCTTGC
TTGCAGACTACGACACCCTGTCAGAGCCTCTGTGCGACGGGTTCGGAGTC
CCGCGCGTCCTCTTTGCGGGCGAGGCCACCACCCGCTACCACCCCTCCAC
CACCACTGGCGCCTGGCTCAGCGGCCTGAGGGAGGCCATGCGCATTGACA
TGCTGGTCCGTCCCACCAAGCACAAGGAGCCGTTTGATCCAGACTGCGTC
TACGACTGCTCCATCCGCTTCCCGCGAGTGCCACACAGCGAGCGGTCGCC
CTTCACCGGCGCGCCATCTCCATGTGAGTTGAAGTTGACAGCCACGTAG

Coding sequence (CDS) from alignment at Contig_91:592405..597653+

>mRNA_13534 ID=mRNA_13534|Name=jgi.p|Trimin1|172289|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1737bp|location=Sequence derived from alignment at Contig_91:592405..597653+ (Tribonema minus UTEX_B_3156 )
ATGGGTGAGAATAGGCGGGTCATCGTTGTGGGCGCAGGCATCAGTGGTCT
TGCTGCTGCTCGCGAGCTCACCCAGCGGGGCTATGAGGTTACTGTGTTGG
AGGGCCGAGACAGGCCAGGCGGACGCACTGTATCTGTGGACATGGGAGGA
TCCATGGTTGATCTTGGAGCCGCATTCATTCACGGCGTGGAGGGCAATCC
CTTGAGCGCCATCGTCAAAGAAATGGGTTTGACACCGGTACCATTTGAGC
AGTGCACACTCTATCAGTCAGACGGCTGGCCCGCCGACATCAGAGAAGAC
AGGCGTGTGGAGCGCATCTTCAATGATGTGCTCGAAAGATGTCACCAGGC
AGCGGTGCAGCACTTGGAGCAGCGGGGGAGGAGTTTCTCAGACGCCACGG
CCGCCAGCCGTGAACCAGCGCCTGGCCTCAGCAACACCATCGGTTCTGGT
GGCAGTAGGCGCAGGCCTGCGTCAACACTCAAGCCGTCTGCTGGTGCCAC
AGCCGCCACAGCTGCAGCAGCTGGTGCCGCTTCAACCCCCAGCGGCAATG
GCGCAGCTGCGGATGGCGCTGTCGACAGCCGCAACGGTGTACACAGTACT
GTCGCAGCAGCAACTGGCGCCGCTGCTGGTGTCGAACCAGCGCAGCCGCA
GCGGATCCTGCCGGGCCGCTTGGACGAGCTGCTAGCGCAGGAAGGCAAGT
CACTGCTCAGTGGTCTTTCCAAGGGCGAGCAGCAGCTCTTCAACTGGCAC
AGGGGGAACCTGGAGATTGCATGCGGCGCGGATCTCAGCGAGCTGAGCGC
TGTGCACTGGAACCAGGACGATCGGTACCAGTACGAGGGGGACCACGTGA
TGCTGAGGGAGGGGTATGGGTGCTTGGTGAAGGCGCTATCCAAGCGCTTG
GACATTCGATACCAGGCGGAGGTTAAAGTCATCAAACTGGACACCACGGC
TGTCAAGGGCGTGCAAGCCACCACAGCAGACGGCCGCACCTTCGACGCTG
ACTTCCTGGTGTGCACGCTGCCGCTGGGAGTGCTCAAGGCACGCGCAGTG
CGATTTGATCCCGTGCTGCCGCAAGCGAAGACTGACAGCATCCGCGCCCT
GGGGTTCGGGTGTCTCAACAAGGTCGTCATGCTGTTTCCTACCGTGTTCT
GGGACACTATGGACTTCATTGGCCATGCGGCGGACACGCGAGGGCAGTGG
GTACTGTTTGCTGACCTGAGCAGGATGACTGGGCAGGCGGTGCTGGTGGC
CATGACTGGCGGCCCATTCGCAACATCAATCGAGCGGCTCTCTGACAGTG
GCATCCTACAGCAGATCATGGCCGTGCTCAAACGCATCTATCACAAGGTG
CCGGAGCCCGTCAAGGTGGAGATCAGCCGTTGGAAGAGCGACCGGTTTGC
CAGGGGTTCATTCAGCTTCATTGCACCGGATGCCACAGCAAAAGACTACG
ACACCCTGTCAGAGCCTCTGTGCGACGGGTTCGGAGTCCCGCGCGTCCTC
TTTGCGGGCGAGGCCACCACCCGCTACCACCCCTCCACCACCACTGGCGC
CTGGCTCAGCGGCCTGAGGGAGGCCATGCGCATTGACATGCTGGTCCGTC
CCACCAAGCACAAGGAGCCGTTTGATCCAGACTGCGTCTACGACTGCTCC
ATCCGCTTCCCGCGAGTGCCACACAGCGAGCGGTCGCCCTTCACCGGCGC
GCCATCTCCATGTGAGTTGAAGTTGACAGCCACGTAG