mRNA_13361 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|156212 vs. uniprot
Match: A0A835ZID9_9STRA (Polyketide_cyc domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZID9_9STRA) HSP 1 Score: 309 bits (791), Expect = 2.240e-106 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 1
Query: 1 KEYHERKLVRFTPQQVYSVVSDVANYKKFVPFCVDSRILRQVGPGSTTVDAELAVGFKVFTEKYTSRVTLKPPSVVAARAVDSRIFSELSSTWSFKPGPRDGTTYLSFDVEFEVKNPIAATAVNAFFEDVTQQQVKAFERRCKQLYGESNRESEAAV 471
KEYHERKLVRFTPQQVYSVVSDVANYKKFVPFCVDSRILRQVGPGSTTVDAELAVGFKVFTEKYTSRVTLKPPSVVAARAVDSRIFSELSSTWSFKPGPRDGTTYLSFDVEFEVKNPIAATAVNAFFEDVTQQQVKAFERRCKQLYGESNRESEAAV
Sbjct: 1 KEYHERKLVRFTPQQVYSVVSDVANYKKFVPFCVDSRILRQVGPGSTTVDAELAVGFKVFTEKYTSRVTLKPPSVVAARAVDSRIFSELSSTWSFKPGPRDGTTYLSFDVEFEVKNPIAATAVNAFFEDVTQQQVKAFERRCKQLYGESNRESEAAV 157
BLAST of jgi.p|Trimin1|156212 vs. uniprot
Match: A0A6H5KIH8_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIH8_9PHAE) HSP 1 Score: 168 bits (426), Expect = 4.370e-47 Identity = 83/147 (56.46%), Postives = 109/147 (74.15%), Query Frame = 1
Query: 7 YHERKLVRFTPQQVYSVVSDVANYKKFVPFCVDSRILRQVGPGSTTVDAELAVGFKVFTEKYTSRVTLKPPSVVAARAVDSRIFSELSSTWSFKPGPRDGTTYLSFDVEFEVKNPIAATAVNAFFEDVTQQQVKAFERRCKQLYGES 447
+ ER++V + P+Q Y VV+DV NYK FVPFCVDSR+++ + T++AE++VGFK+FTEKYTSRV KPPS VA +A+ SR+FS L STW F+PG TT + F VEFEVKN +AA A++ FF++V KAFERRC+ LYG S
Sbjct: 47 HRERRVVPYLPEQFYGVVADVDNYKNFVPFCVDSRVVKVID--ENTMEAEMSVGFKLFTEKYTSRVVTKPPSEVAVKAMHSRLFSSLDSTWRFRPGTAPNTTVIDFSVEFEVKNLLAAQAMDMFFDEV-----KAFERRCRHLYGTS 186
BLAST of jgi.p|Trimin1|156212 vs. uniprot
Match: A0A5J4XII3_9CHLO (Coenzyme Q-binding COQ10 mitochondrial-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XII3_9CHLO) HSP 1 Score: 145 bits (365), Expect = 3.030e-40 Identity = 69/150 (46.00%), Postives = 104/150 (69.33%), Query Frame = 1
Query: 1 KEYHERKLVRFTPQQVYSVVSDVANYKKFVPFCVDSRILRQVGPGSTTVDAELAVGFKVFTEKYTSRVTLKPPSVVAARAVDSRIFSELSSTWSFKPGPRDGTTYLSFDVEFEVKNPIAATAVNAFFEDVTQQQVKAFERRCKQLYGESN 450
K+Y ER+L+ ++P+Q+Y VV++V +Y++FVP+C S I+R+ G T ++AEL VGF++F E+YTS V LKP V ++ DS +F L STW FK GP +T+L+F V+F K+P+ + FFE+V Q+ + AFE RCK +YG S+
Sbjct: 95 KDYKERRLIGYSPKQLYDVVAEVQHYREFVPWCQRSHIIRR--EGDTFLEAELEVGFRLFVERYTSEVYLKPGEQVISKVFDSTLFDHLDSTWDFKVGPSPSSTWLTFSVDFGFKSPLYRSVAAVFFEEVVQRMMAAFEGRCKVVYGASS 242
BLAST of jgi.p|Trimin1|156212 vs. uniprot
Match: A0A8J9WPC4_9CHLO (Coenzyme Q-binding protein COQ10 homolog B, mitochondrial n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WPC4_9CHLO) HSP 1 Score: 142 bits (358), Expect = 1.070e-39 Identity = 69/149 (46.31%), Postives = 102/149 (68.46%), Query Frame = 1
Query: 1 KEYHERKLVRFTPQQVYSVVSDVANYKKFVPFCVDSRILRQVGPGSTTVDAELAVGFKVFTEKYTSRVTLKPPSVVAARAVDSRIFSELSSTWSFKPGPRDGTTYLSFDVEFEVKNPIAATAVNAFFEDVTQQQVKAFERRCKQLYGES 447
K+Y ER+L+ ++P+Q++ VV+ V +YK+FVP+C S+I+++ P V+AEL VGFK+F E+YTS+V L P+ V + DS +F L STW FKPGP +T+L F V+F K+P+ + FF++V + + AFE RCKQLYG S
Sbjct: 57 KQYQERRLIGYSPKQLFDVVAAVEHYKEFVPWCQRSQIIQEKPPDY--VEAELEVGFKLFVERYTSQVHLHRPNKVVSHVYDSTLFDHLDSTWEFKPGPTPSSTWLYFSVDFAFKSPLYRHIASVFFDEVVKHMMGAFEGRCKQLYGTS 203
BLAST of jgi.p|Trimin1|156212 vs. uniprot
Match: A0A2V0PGC9_9CHLO (Polyketide_cyc domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PGC9_9CHLO) HSP 1 Score: 142 bits (357), Expect = 3.710e-39 Identity = 69/150 (46.00%), Postives = 104/150 (69.33%), Query Frame = 1
Query: 1 KEYHERKLVRFTPQQVYSVVSDVANYKKFVPFCVDSRILRQVGPGSTTVDAELAVGFKVFTEKYTSRVTLKPPSVVAARAVDSRIFSELSSTWSFKPGPRDGTTYLSFDVEFEVKNPIAATAVNAFFEDVTQQQVKAFERRCKQLYGESN 450
K Y ER+L+ ++P+Q+YSVVS V Y +FVP+CV S++LR G ++AEL VGF+VF E+YTS+VTL+ P+ V + DSR+F L STW +PGP+ GTT+L F V+F ++ + + FF +V ++ + AFE RC+++YG S+
Sbjct: 28 KVYQERRLLGWSPEQLYSVVSRVDEYSRFVPWCVGSKVLRGGAEGGY-LEAELEVGFQVFVERYTSKVTLQAPNKVHSSVSDSRLFDHLESTWLLRPGPQPGTTWLVFKVDFAFRSALYRHVADLFFSEVVKRMIGAFEGRCREVYGPSS 176
BLAST of jgi.p|Trimin1|156212 vs. uniprot
Match: I0Z0V0_COCSC (Polyketide_cyc domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z0V0_COCSC) HSP 1 Score: 142 bits (359), Expect = 5.250e-39 Identity = 70/149 (46.98%), Postives = 99/149 (66.44%), Query Frame = 1
Query: 1 KEYHERKLVRFTPQQVYSVVSDVANYKKFVPFCVDSRILRQVGPGSTTVDAELAVGFKVFTEKYTSRVTLKPPSVVAARAVDSRIFSELSSTWSFKPGPRDGTTYLSFDVEFEVKNPIAATAVNAFFEDVTQQQVKAFERRCKQLYGES 447
K Y ER+L+ ++P+Q+Y VV+ V +YK+FVP+C S I+++ P V+AEL VGFK+F E+YTS+V L P V + DS +F L STW FKPGP G+T+L F V+F K+P+ + FF++V + + AFE RCK LYG S
Sbjct: 131 KHYQERRLIGYSPKQLYDVVAAVEHYKEFVPWCQRSEIIQERPPDF--VEAELEVGFKLFVERYTSQVHLHRPGKVVSHVYDSTLFDHLDSTWEFKPGPTPGSTWLFFSVDFAFKSPLYRHIASVFFDEVVKHMMGAFEGRCKHLYGSS 277
BLAST of jgi.p|Trimin1|156212 vs. uniprot
Match: A0A7J7PJE1_9CHLO (Polyketide_cyc domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PJE1_9CHLO) HSP 1 Score: 142 bits (358), Expect = 1.220e-38 Identity = 67/147 (45.58%), Postives = 100/147 (68.03%), Query Frame = 1
Query: 1 KEYHERKLVRFTPQQVYSVVSDVANYKKFVPFCVDSRILRQVGPGSTTVDAELAVGFKVFTEKYTSRVTLKPPSVVAARAVDSRIFSELSSTWSFKPGPRDGTTYLSFDVEFEVKNPIAATAVNAFFEDVTQQQVKAFERRCKQLYG 441
K Y+ER+L+ ++P+Q+Y VVS V +Y +FVP+CV S +LR+ P ++ ++AEL +GF++ +E+YTSRV L+ P +V + DS +F L STW +PGP +T+LSF V+F NP+ A FF +V + + AFE RCK LYG
Sbjct: 114 KAYNERRLIGYSPEQLYEVVSQVQHYYQFVPWCVGSNVLRR-SPDNSYLEAELKIGFQMISERYTSRVKLQAPHLVTSSVADSALFHHLESTWRLQPGPHPHSTWLSFSVDFAFLNPLYANIAQLFFSEVVTRMMGAFEGRCKHLYG 259
BLAST of jgi.p|Trimin1|156212 vs. uniprot
Match: A0A2P6U320_CHLSO (Coenzyme Q-binding COQ10 mitochondrial-like n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U320_CHLSO) HSP 1 Score: 140 bits (352), Expect = 3.760e-38 Identity = 69/150 (46.00%), Postives = 106/150 (70.67%), Query Frame = 1
Query: 1 KEYHERKLVRFTPQQVYSVVSDVANYKKFVPFCVDSRILRQVGPGSTTVDAELAVGFKVFTEKYTSRVTLKPPSVVAARAVDSRIFSELSSTWSFKPGPRDGTTYLSFDVEFEVKNPIAATAVNAFFEDVTQQQVKAFERRCKQLYGESN 450
K +HE+KL+ ++P+QVY VV+ V +Y +FVP+C S +L + PG ++AEL VGF++F E+YTS+VTL+ P+ V +R DS +FS L++ W F+ GP TT+L+F+V+F K+P+ + FFE+V Q+ + AFE RC Q+YG S+
Sbjct: 111 KRHHEKKLLGWSPRQVYDVVAAVEHYSQFVPWCQRSTVLLRRPPGY--LEAELEVGFQMFVERYTSKVTLQCPTAVHSRVDDSTLFSYLTNKWEFRLGPTPHTTWLTFEVDFAFKSPLYRQVASIFFEEVVQRMMGAFEGRCAQVYGPSS 258
BLAST of jgi.p|Trimin1|156212 vs. uniprot
Match: A0A5A8EEH9_CAFRO (Polyketide_cyc domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EEH9_CAFRO) HSP 1 Score: 140 bits (352), Expect = 1.890e-37 Identity = 67/148 (45.27%), Postives = 105/148 (70.95%), Query Frame = 1
Query: 7 YHERKLVRFTPQQVYSVVSDVANYKKFVPFCVDSRILRQVGPGSTTVDAELAVGFKVFTEKYTSRVTLKPPSVVAARAVDSRIFSELSSTWSFKPGPRDGTTYLSFDVEFEVKNPIAATAVNAFFEDVTQQQVKAFERRCKQLYGESN 450
+ ER+++R +P+ VY+VVSDVA Y +FVP+CV S ++ + P T ++AELAVGF++FTE+Y S+VT++ P+ V A A ++++F L + W F+PGP GTT+L F V+F K+ + A A F ++V ++ V AFE RC +LYG ++
Sbjct: 52 HKERRIMRHSPEDVYAVVSDVARYHEFVPWCVGSDVISR--PSDTYMEAELAVGFRMFTERYLSKVTMQHPAHVRAVAANTQLFRSLVNEWRFRPGPEPGTTWLEFRVDFAFKSALYAQASALFQDEVARRMVSAFEHRCDELYGRAS 197
BLAST of jgi.p|Trimin1|156212 vs. uniprot
Match: A0A383VYA6_TETOB (Polyketide_cyc domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VYA6_TETOB) HSP 1 Score: 139 bits (351), Expect = 3.340e-37 Identity = 66/147 (44.90%), Postives = 99/147 (67.35%), Query Frame = 1
Query: 1 KEYHERKLVRFTPQQVYSVVSDVANYKKFVPFCVDSRILRQVGPGSTTVDAELAVGFKVFTEKYTSRVTLKPPSVVAARAVDSRIFSELSSTWSFKPGPRDGTTYLSFDVEFEVKNPIAATAVNAFFEDVTQQQVKAFERRCKQLYG 441
K Y+ER+L+ ++P+Q+Y VVS V +Y +FVP+CV S +LR+ P ++ ++AEL +GF++ +E+YTSRV L+ P +V + +S +F L STW PGP +T+LSF V+F NP+ A FF +V + + AFE RCK LYG
Sbjct: 109 KAYNERRLIGYSPEQLYEVVSQVQHYHQFVPWCVGSNVLRR-SPDNSYLEAELQIGFQMISERYTSRVKLQAPHLVTSSVANSALFHHLESTWRLAPGPSPHSTWLSFSVDFAFLNPLYANIAQLFFSEVVTRMMGAFEGRCKHLYG 254 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|156212 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_13361 ID=mRNA_13361|Name=jgi.p|Trimin1|156212|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=471bp|location=Sequence derived from alignment at Contig_141:101172..101642+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. AAGGAGTACCACGAGAGGAAGCTGGTGCGCTTCACGCCGCAGCAGGTCTAback to top protein sequence of jgi.p|Trimin1|156212 >Trimin1|156212|gw1.141.108.1 ID=Trimin1|156212|gw1.141.108.1|Name=jgi.p|Trimin1|156212|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=157bp KEYHERKLVRFTPQQVYSVVSDVANYKKFVPFCVDSRILRQVGPGSTTVDback to top mRNA from alignment at Contig_141:101172..101642+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_13361 ID=mRNA_13361|Name=jgi.p|Trimin1|156212|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=471bp|location=Sequence derived from alignment at Contig_141:101172..101642+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_141:101172..101642+ >mRNA_13361 ID=mRNA_13361|Name=jgi.p|Trimin1|156212|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=471bp|location=Sequence derived from alignment at Contig_141:101172..101642+ (Tribonema minus UTEX_B_3156 )back to top |