mRNA_13100 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|177876
Unique NamemRNA_13100
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|177876 vs. uniprot
Match: A0A835Z8D7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8D7_9STRA)

HSP 1 Score: 754 bits (1948), Expect = 1.250e-274
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 1 
Query:    1 MSTTDPLSIDPVITKQQGKNAARNELILERVEALAPKVALVTTPLWRVTKLLFGLSILFYGLNFKTLALHIIIFRISGYKDVMQHMGELQSHYTKVRAATEAAAKNTKSLNESLAQKAKRREAREKMLVDRQQMLKDGRITAEEAQAFIAKHREELEIMAAQQEQLQATGSSLVALRSAIRWKAVGKTLRKLYEATIASITASTFEAAGRFTMAMYCGDALRDDMRTLLGPSIDPLAYQVAEVKGNVESIMMGPSAARAAFFGLAATAVLLVMFYEEPNWALKVSLCYLGSGVVVGYLKSVVCPFAERAGVRLRPRYWVLAHLLIMGVGWRFHLANCPLLRALCLPFIHALEAGNTLLNSFSMSAAHYLHREQELVAHAVADGAHAIQAAAAARLHHPQ 1197
            MSTTDPLSIDPVITKQQGKNAARNELILERVEALAPKVALVTTPLWRVTKLLFGLSILFYGLNFKTLALHIIIFRISGYKDVMQHMGELQSHYTKVRAATEAAAKNTKSLNESLAQKAKRREAREKMLVDRQQMLKDGRITAEEAQAFIAKHREELEIMAAQQEQLQATGSSLVALRSAIRWKAVGKTLRKLYEATIASITASTFEAAGRFTMAMYCGDALRDDMRTLLGPSIDPLAYQVAEVKGNVESIMMGPSAARAAFFGLAATAVLLVMFYEEPNWALKVSLCYLGSGVVVGYLKSVVCPFAERAGVRLRPRYWVLAHLLIMGVGWRFHLANCPLLRALCLPFIHALEAGNTLLNSFSMSAAHYLHREQELVAHAVADGAHAIQAAAAARLHHPQ
Sbjct:    1 MSTTDPLSIDPVITKQQGKNAARNELILERVEALAPKVALVTTPLWRVTKLLFGLSILFYGLNFKTLALHIIIFRISGYKDVMQHMGELQSHYTKVRAATEAAAKNTKSLNESLAQKAKRREAREKMLVDRQQMLKDGRITAEEAQAFIAKHREELEIMAAQQEQLQATGSSLVALRSAIRWKAVGKTLRKLYEATIASITASTFEAAGRFTMAMYCGDALRDDMRTLLGPSIDPLAYQVAEVKGNVESIMMGPSAARAAFFGLAATAVLLVMFYEEPNWALKVSLCYLGSGVVVGYLKSVVCPFAERAGVRLRPRYWVLAHLLIMGVGWRFHLANCPLLRALCLPFIHALEAGNTLLNSFSMSAAHYLHREQELVAHAVADGAHAIQAAAAARLHHPQ 399
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BLAST of jgi.p|Trimin1|177876 vs. uniprot
Match: A0A835YUQ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUQ5_9STRA)

HSP 1 Score: 372 bits (956), Expect = 1.080e-123
Identity = 204/347 (58.79%), Postives = 254/347 (73.20%), Query Frame = 1 
Query:   76 LILERVEALAPKVALVTTPLWRVTKLLFGLSILFYGLNFKTLALHIIIFRISGYKDVMQHMGELQSHYTKVRAATEAAAKNTKSLNESLAQKAKRREAREKMLVDRQQMLKDGRITAEEAQAFIAKHREELEIMAAQQEQLQATGSSLVALRSAIRWKAVGKTLRKLYEATIASITASTFEAAGRFTMAMYCGDALRDDMRTLLGPSIDPLAYQVAEVKGNVESIMMGPSAARAAFFGLAATAVLLVMFYEEPNWALKVSLCYLGSGVVVGYLKSVVCPFAERAGVRLRPRYWVLA--HLLIMGVGWRFHLANCPLLRALCLPFIHALEAGNTLLNSFSMSAAHYLH 1110
            L L+  E L P      TP+WR+ KLLFG+SILFYG NF+T+A HIIIFRISGYK V++H  +L SHY K R AT  AA++T SLNESLAQ+  RRE RE ML DRQ+ML+DGRITAEEA+ FI +HR+E+  +AAQQ+QL A  SS++ALR+AI WKA+  TLR LY A + S+TASTF+AAGRFTMA+YCGD L+ D+  LLGP IDPL+Y+ AE+  ++ESIMMGP+AARA F G+AATA LL MFY +P WAL++SLC+LGS VV+GYL+ V+ P A R  VR   R  + A  HLL+  VGWR+H         +CLP I  LE GN  LN F+MSA  Y +
Sbjct:   47 LWLDWAEVLLPVAISALTPVWRLVKLLFGISILFYGSNFQTIAFHIIIFRISGYKSVIKHCRDLVSHYKKARKATALAARHTLSLNESLAQQKLRREEREHMLRDRQEMLRDGRITAEEARQFITRHRQEIRAIAAQQDQLAAASSSIMALRTAIPWKALSTTLRDLYAALVTSVTASTFKAAGRFTMALYCGDVLKRDVIALLGPCIDPLSYE-AELCTDLESIMMGPAAARATFAGVAATAALLTMFYRDPEWALQLSLCFLGSSVVIGYLEMVLDPLARRFKVRQLSRSPLSAILHLLLTAVGWRYHCHAGATKEFVCLPLIKVLEWGNAFLNKFNMSAVQYFN 392
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BLAST of jgi.p|Trimin1|177876 vs. uniprot
Match: D7FJ41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ41_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 1.580e-49
Identity = 125/350 (35.71%), Postives = 195/350 (55.71%), Query Frame = 1 
Query:   76 LILERVEALAPKVALVTT---PLWRVTKLLFGLSILFYGLNFKTLALHIIIFRISGYKDVMQHMGELQSHYTKVRAATEAAAKNTKSLNESLAQKAKRREAREKMLVDRQQMLKDGRITAEEAQAFIAKHREELEIMAAQQEQLQATGSSLVALRSAIRWKAVGKTLRKLYEATIASITASTFEAAGRFTMAMYCGDALRDDMRTLLGPSIDPLAYQVAEVKGNVESIMMGPSAARAAFFGLAATAVLLVMFYEEPNWALKVSLCYLGSGVVVGYLKSVVCPFAERAGVRLRPRYWVLA---HLLIMGVGWRFHLANCPLLRAL-CLPFIHALEAGNTLLNSFSMSAAHY 1104
            L L+ VE     V+L  +   PLW   + +FGLS+LFYG +F TLA HI++FRISG+K   +   EL ++Y K R     AAK+ ++    +A+K +                  GR++AEEA+AFI K+R ++EI+A +QE L  T SS++A++ A+ +K +  ++  LY A I SITASTF+ AG+ T+A+ CG  ++  +  LLGP IDP+ YQ+ E++  V +IM GP+       G  ++A +   F+ +P  AL ++   LG+ VV  Y+ + + P   R G+  +     ++   +LL+  +G+ FH  N  L+    C PFI  L   N  LN F  +   Y
Sbjct:   86 LWLDVVEPFFASVSLAISSLYPLWHTLRGMFGLSLLFYGEDFATLAFHIVVFRISGWKKAAKSKDELVAYYKKARQTMTKAAKDVRASAAIIARKDRXXXXXXXXXXXXXXXHAIGRVSAEEARAFIDKYRNDIEIIAREQEVLAETSSSILAIKGALSFKKLAASVNSLYAAVITSITASTFKRAGQLTLALTCGGLIKRALFDLLGPVIDPIGYQI-ELETYVANIMRGPANLYITLAGYVSSASVFFHFFVDPQQALTITFVLLGARVVTDYIVAALNPVRWRFGMSKKLDNMPISAVIYLLLASLGFIFH-GNAGLVGDFACKPFIAFLGLLNKGLNHFQATTITY 433
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BLAST of jgi.p|Trimin1|177876 vs. uniprot
Match: A0A835Z464_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z464_9STRA)

HSP 1 Score: 154 bits (389), Expect = 4.080e-38
Identity = 126/416 (30.29%), Postives = 183/416 (43.99%), Query Frame = 1 
Query:   73 ELILERVEALAPKVALVTTPLWRVTKLLFGLSILFYGLNFKTLALHIIIFRISGYKDVMQHMGELQSHYTKVRAATEAAAKNTKSLNESLAQKAKRREAREKMLVDRQQMLKDGRITAEEAQAFIAKHREELEI-------------------------------MAAQQEQLQATGSSLVALRSAIRWKA--------------------------------------------------------------------VGKT-LRKLYEATIASITASTFEAAGRFTMAMYCGDALRDDMRTLLGPSIDPLAYQVAE-----VKGNVESIMMGPSAARAAFFGLAATAVLLVMFYEEPNWALKVSLCYLGSGVVVGYLKSVVCPFAERAGVR--LRPRYWVLAHLLIMGVGWRFH 999
            +L LE VE     V  V  P++   K LFGLSILF+G+ FK+LALHII+F+I G+K V+ H   L +HY +VRAAT  AA++ +   +       R   +E ML DR+ ML DGR+  +EA+AF+AKH                                     +A +     AT SS+ AL  AI W                                                                      VG+  L   Y A   S+ ++ F++A R  +A+YCG  +R+D+  LL P IDP   +V E     ++  ++ IM GP+AA+AA  G AA+  L  +F++EP WAL ++L  LGS +V  ++  +V     R G    LR     L H+ +  +GW +H
Sbjct:   64 KLFLEHVEGAVNAVVPVVAPVFFSLKALFGLSILFFGMTFKSLALHIILFQIVGFKKVVMHWHHLVAHYRRVRAATLHAARSARRTLKEREDTGARVREQEAMLRDRKAMLADGRLDVDEARAFMAKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAEKDAAQGATKSSIAALYYAIPWHEIWVSFCDLYAVLATSVASTAFKSAARVQLAIYCGXXXXXXXXXXXXXXVGWHRAIDLQLCICPYFNCEVGRNGLPSTYAAVATSVASTAFKSAARVQLAIYCGKVVREDVLALLAPYIDPRVSEVLEDEDDELEEQLQVIMNGPAAAKAALVGAAASVGLTALFFKEPEWALMLALVLLGSRIVAEFISRMVVWLVVRNGKAHWLRKSQLALLHMFLGTLGWFYH 479
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BLAST of jgi.p|Trimin1|177876 vs. uniprot
Match: D8LTP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP1_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 1.600e-32
Identity = 89/279 (31.90%), Postives = 156/279 (55.91%), Query Frame = 1 
Query:  112 VALVTTPLWRVTKLLFGLSILFYGLNFKTLALHIIIFRISGYKDVMQHMGELQSHYTKVRAATEAAAKNTKSLNESLAQKAKRREAREKMLVDRQQMLKDGRITAEEAQAFIAKHREELEIMAAQQEQLQATGSSLVALRSAIRWKAVGKTLRKLYEATIASITASTFEAAGRFTMAMYCGDALRDDMRTLLGPSIDPLAYQV--AEVKGNVESIMMGPSAA----RAAFFGLAATAVLLVMFYEEPNWALKVSLCYLGSGVVVGYLKSVVCPFAERAG 930
            +A+V  P+  + +L FGLS+LFYG+ F+T A H+I+FRI+G K V + + EL   Y   R +   AA+  +++ E + +    + ARE+M+ +++++L DG ++  +   F+ K+R EL  +  +QE  Q+  SS+++LRS++  +    +   +Y A IA  TAST + AG+FT+ ++ G+ L+  +  L GP IDP+ Y++  +      +   MG + A    R     +   +V+  +F   P+ ALK+S+ Y G  VV  Y+     P   + G
Sbjct:   20 MAVVGVPVLHLGRLGFGLSLLFYGMAFRTFAFHVIVFRIAGMKQVQRAVRELVGKYASARRSIREAAEAAETVGERVVKGDDLQAARERMIEEKKRLLSDGFLSERDTTYFMKKYRAELLKIKEEQELFQSARSSVLSLRSSVGPRQARSSFNGVYNALIACFTASTIQTAGQFTLGLHIGNLLKTHVLDLFGPIIDPIGYRLDLSPYFDEEDIPYMGKANAMGGPRNMALNILCYSVVFAVFRVHPSVALKLSMVYYGGRVVTDYVVLFTEPARRKLG 298
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BLAST of jgi.p|Trimin1|177876 vs. uniprot
Match: A0A6H5JP85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP85_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 5.100e-32
Identity = 96/308 (31.17%), Postives = 169/308 (54.87%), Query Frame = 1 
Query:   52 GKNAARNELILERVE----ALAPKVALVTTPLWRVTKLLFGLSILFYGLNFKTLALHIIIFRISGYKDVMQHMGELQSHYTKVRAATEAAAKNTKSLNESLAQKAKRREAREKMLVDRQQMLKDGRITAEEAQAFIAKHREELEIMAAQQEQLQATGSSLVALRSAIRWKAVGKTLRKLYEATIASITASTFEAAGRFTMAMYCGDALRDD-----MRTLLGPSIDPLAYQV--AEVKGNVESIMMGPSAA----RAAFFGLAATAVLLVMFYEEPNWALKVSLCYLGSGVVVGYLKSVVCPFAERAG 930
            G    +N L+++ VE     +   +  V  P++ + +  FGLS+LFYG+ F+T A H+I+FRI+G K V + + EL  +Y   R +   AAK  +++ E + +    + ARE+M+ +++++L DG ++  E   F+ K+R EL  +  +QE  Q+  SS+++LRS++  +    +   +Y A IAS TAST + AG+FT+ ++ G+ L+       +  L GP IDP+ Y++  +      +   MG + A    R     +   +V+ ++F   P+ ALK+S+ Y G+ VV  Y+  V  P   + G
Sbjct:  198 GGTPRKNRLMIDYVEDALVTMWSHMVNVGVPVFHLGRFGFGLSLLFYGMAFRTFAFHVIVFRIAGMKQVQRAVRELVGNYANARRSIREAAKAAETVGERVVKGDDLQAARERMIEEKKRLLSDGFLSKRETIYFMKKYRAELLRIKEEQELFQSARSSVLSLRSSVGPRQARSSFNGVYNALIASFTASTIQTAGQFTLGLHIGNLLKASYLLTHVLDLFGPIIDPIGYRLDLSPYFDEEDIPYMGKANAMDGPRNMALNIFCYSVVFIVFQVHPSVALKLSMVYYGARVVTDYVVLVTEPARRKLG 505
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BLAST of jgi.p|Trimin1|177876 vs. uniprot
Match: D8LTP3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP3_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 2.190e-25
Identity = 90/308 (29.22%), Postives = 150/308 (48.70%), Query Frame = 1 
Query:   67 RNELILERVE----ALAPKVALVTTPLWRVTKLLFGLSILFYGLNFKTLALHIIIFRISGYKDVMQHMGELQSHYTK----VRAATEAAAKNTKSLNESLAQKAKRREAREKMLVDRQQMLKDGR-ITAEEAQAFIAKHREELEIMAAQQEQLQATGSSLVALRSAIRWKAVGKTLRKLYEATIASITASTFEAAGRFTMAMYCGDALRDDMRTLLGPSIDPLAYQV--------AEVK--GNVESIMMGPSAARAAFFGLAATAVLLVMFYEEPNWALKVSLCYLGSGVVVGYLKSVVCPFAERAGV 933
            +N + L+ VE    +L  ++ +V  P   +T+L FGLS+LFYG+ F+T A H+I+FRISG+K V    G+L + Y K    +R A  A                              ++L  GR +T E+ + F+ K+ +EL  +  +Q  + +  SS+++++S++       +LR LY   I S TAST++ AG+  + ++ G  L+  +  L GP +DP+ Y++        AE+   GN  + M GP       F     A++  +    P  ALK ++ Y G+ VV  YL     P   + G+
Sbjct:    3 KNRIFLDNVEDILGSLGRRLQMVGKPALHLTRLGFGLSLLFYGMAFRTFAFHVIVFRISGFKQVQVSSGKLAAKYRKARQSIREAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRLLAHGRKLTKEDTRKFMKKYHKELTTIKQEQAAINSINSSMISVKSSVDPDNARSSLRGLYSGLITSFTASTYQTAGQIALGLHVGTLLKTHLLDLFGPMLDPIGYRLDLTTYYDEAEIPYMGNPNA-MDGPHNLAMNIF---CYALVFAVIRAHPPLALKTAMVYFGARVVTDYLVMTAEPIRRKLGL 306
[Close]
BLAST of jgi.p|Trimin1|177876 vs. uniprot
Match: A0A6H5JP14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP14_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 8.620e-5
Identity = 33/79 (41.77%), Postives = 47/79 (59.49%), Query Frame = 1 
Query:  118 LVTTPLWRVTKLLFGLSILFYGLNFKTLALHIIIFRISGYKDVMQHMGELQSHYTKVRAATEAAAKNTKSLNESLAQKA 354
            +V  P   + +L FGLS+LFYG+ F+T A H+I+FRISG+K V   +G+L + Y   R +  AAA   +S       KA
Sbjct:  174 MVGRPPLHLARLGFGLSLLFYGMAFRTFAFHVIVFRISGFKQVS--LGKLAAKYRNARQSIRAAAAAAESAKRDQEHKA 250
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|177876 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A835Z8D7_9STRA1.250e-274100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YUQ5_9STRA1.080e-12358.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FJ41_ECTSI1.580e-4935.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z464_9STRA4.080e-3830.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LTP1_ECTSI1.600e-3231.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP85_9PHAE5.100e-3231.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTP3_ECTSI2.190e-2529.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP14_9PHAE8.620e-541.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_161contigContig_161:44707..50277 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|177876|e_gw1.161.31.1
Hectar predicted targeting categoryother localisation
TranscriptId178198
TrackFilteredModels1
ProteinId177876
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|177876gene_13100Tribonema minus UTEX_B_3156 geneContig_161 44707..50277 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|177876Trimin1|177876|e_gw1.161.31.1Tribonema minus UTEX_B_3156 polypeptideContig_161 44707..50277 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13100_1exon_13100_1Tribonema minus UTEX_B_3156 exonContig_161 44707..44958 +
exon_13100_2exon_13100_2Tribonema minus UTEX_B_3156 exonContig_161 45088..45300 +
exon_13100_3exon_13100_3Tribonema minus UTEX_B_3156 exonContig_161 46270..46521 +
exon_13100_4exon_13100_4Tribonema minus UTEX_B_3156 exonContig_161 48568..48750 +
exon_13100_5exon_13100_5Tribonema minus UTEX_B_3156 exonContig_161 49978..50277 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13100CDS_13100Tribonema minus UTEX_B_3156 CDSContig_161 44707..44958 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13100 ID=mRNA_13100|Name=jgi.p|Trimin1|177876|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1200bp|location=Sequence derived from alignment at Contig_161:44707..50277+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTCCACCACAGATCCTCTGTCCATCGATCCAGTCATCACAAAGCAGCA
GGGCAAAAATGCAGCCCGAAACGAACTTATCCTCGAGCGAGTGGAAGCTT
TGGCGCCCAAGGTAGCTTTGGTGACGACGCCGCTGTGGCGGGTGACGAAG
CTGCTGTTCGGTCTGTCGATCCTCTTCTATGGTCTCAACTTCAAGACCCT
GGCTCTTCACATAATCATCTTCCGGATCAGCGGGTACAAGGACGTTATGC
AGCACATGGGCGAGCTGCAGTCGCACTACACGAAGGTCCGCGCCGCCACG
GAGGCGGCGGCGAAGAACACCAAGTCCCTGAACGAGTCGCTGGCGCAGAA
AGCGAAGCGGCGTGAGGCACGCGAGAAGATGCTGGTGGACCGCCAGCAGA
TGCTCAAGGACGGGCGCATCACCGCGGAGGAGGCGCAGGCGTTCATCGCC
AAGCACAGGGAGGAGCTGGAGATCATGGCCGCGCAGCAGGAGCAGCTGCA
GGCGACGGGCTCGTCGCTCGTCGCGCTGCGCTCCGCGATCCGCTGGAAGG
CCGTCGGCAAGACGCTGCGCAAGCTGTACGAGGCGACCATCGCATCCATC
ACGGCGTCGACGTTCGAGGCCGCGGGGCGCTTCACCATGGCCATGTACTG
CGGCGACGCGCTGCGCGACGACATGCGCACGCTGCTGGGGCCGTCGATAG
ACCCGCTGGCGTACCAGGTGGCAGAGGTGAAGGGCAACGTGGAGAGCATC
ATGATGGGCCCGTCGGCCGCGCGCGCGGCGTTCTTTGGCCTCGCCGCCAC
AGCAGTGCTCCTCGTCATGTTCTACGAGGAGCCCAACTGGGCTCTCAAGG
TGTCGCTGTGCTACCTGGGGTCGGGCGTCGTGGTGGGCTACTTGAAGTCG
GTGGTGTGCCCGTTCGCGGAGCGCGCCGGCGTGCGCCTGCGCCCGCGCTA
CTGGGTCCTCGCGCACCTCCTCATCATGGGCGTCGGCTGGCGCTTCCACC
TCGCCAACTGCCCGCTGCTGCGCGCGCTGTGCCTGCCGTTCATCCACGCG
CTCGAGGCGGGCAACACGCTGCTCAACTCGTTCAGCATGTCCGCGGCGCA
CTACCTGCACCGCGAGCAGGAGCTCGTCGCGCACGCCGTCGCGGACGGCG
CGCACGCGATACAGGCCGCCGCCGCCGCGCGCCTGCACCATCCGCAGTAA
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protein sequence of jgi.p|Trimin1|177876

>Trimin1|177876|e_gw1.161.31.1 ID=Trimin1|177876|e_gw1.161.31.1|Name=jgi.p|Trimin1|177876|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=400bp
MSTTDPLSIDPVITKQQGKNAARNELILERVEALAPKVALVTTPLWRVTK
LLFGLSILFYGLNFKTLALHIIIFRISGYKDVMQHMGELQSHYTKVRAAT
EAAAKNTKSLNESLAQKAKRREAREKMLVDRQQMLKDGRITAEEAQAFIA
KHREELEIMAAQQEQLQATGSSLVALRSAIRWKAVGKTLRKLYEATIASI
TASTFEAAGRFTMAMYCGDALRDDMRTLLGPSIDPLAYQVAEVKGNVESI
MMGPSAARAAFFGLAATAVLLVMFYEEPNWALKVSLCYLGSGVVVGYLKS
VVCPFAERAGVRLRPRYWVLAHLLIMGVGWRFHLANCPLLRALCLPFIHA
LEAGNTLLNSFSMSAAHYLHREQELVAHAVADGAHAIQAAAAARLHHPQ*
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mRNA from alignment at Contig_161:44707..50277+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13100 ID=mRNA_13100|Name=jgi.p|Trimin1|177876|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5571bp|location=Sequence derived from alignment at Contig_161:44707..50277+ (Tribonema minus UTEX_B_3156 )
ATGTCCACCACAGATCCTCTGTCCATCGATCCAGTCATCACAAAGCAGCA
GGGCAAAAATGCAGCCCGAAACGAACTTATCCTCGAGCGAGTGGAAGCTT
TGGCGCCCAAGGTAGCTTTGGTGACGACGCCGCTGTGGCGGGTGACGAAG
CTGCTGTTCGGTCTGTCGATCCTCTTCTATGGTCTCAACTTCAAGACCCT
GGCTCTTCACATAATCATCTTCCGGATCAGCGGGTACAAGGACGTTATGC
AGGTGAGGCCTTGCGCATGTCTTCTTTTCTTGTCAGTTTCATCTGTGTCA
AGCAGAATGCAATCCTCATGCTTCACACACATTTGCCAGGGAACATCACA
CCAGCACAAACCGCCTCGCCACTCCCCGCAGCACATGGGCGAGCTGCAGT
CGCACTACACGAAGGTCCGCGCCGCCACGGAGGCGGCGGCGAAGAACACC
AAGTCCCTGAACGAGTCGCTGGCGCAGAAAGCGAAGCGGCGTGAGGCACG
CGAGAAGATGCTGGTGGACCGCCAGCAGATGCTCAAGGACGGGCGCATCA
CCGCGGAGGAGGCGCAGGCGTTCATCGCCAAGCACAGGGAGGAGGTGCGT
TCGTGAGGGGAGCGTTGCTGCGCGGAGGTTTCGCTGAGCAGTGCTGCTCG
AATCTCATGGCATGCGGATCGCTGCTGCATGAAACAGAGCAGCAGGCATT
GCAGGTCGATGTGCCGAGCAATGCTGGCCAAATTCCCTCGCGTGGCAGCG
TGTGGAACGCTGCTGCGAGTGGTTGAAGTTATTATTGTGTCTTTGCTGAG
CGGTGCTGCCTGCATCGCGAAGCGGCACGTGGAGTCCCGCGTGTAGCTGA
GCGCGTAGAGCGCTGTGAGCAGCTTGATCAGCCCAGCAGATGCTGGCACT
GTGGTGCTCGGCGCTGAGGGTCATGCGGATAACCTGCTGCATCGGTGTTT
GAAACACAGAGAGTGTGGAGCGCTGCTGCTCGGAGCTGAGTGCTGAGCGC
TGTCGGTCACATCTAGTATGCGCAGCGCTCACAAGCTCGGCGCAGCGGCG
CCTCGGTCGAAGAGCGGGAGCGTTGCCTGTCAACCGTGACTGCAGGCGCG
CCTCCACTTACATAGGGTTAAACCCTAACCCCAACCCACTACGCATGCGT
TTTACGCGCTCCTCAACACGACACGTGTTTGGCACATGAAATATTATGCA
TTTCACACTGCGGGTAAGATGCACGCATCCCTTTGCGTGGTAGGCTCACC
GACCCGCGCGCACGCCATCTCTCTCCGCGCAAACGCGTGCGCCGCGCCAC
GCGCGCAGCTGGAGATCATGGCCGCGCAGCAGGAGCAGCTGCAGGCGACG
GGGTTAATGCCACTGGAGTTTCTATAGCCGCACCGTCAGCCACATAGAGT
GGAAGCGTGCGCCGTTCCAGTGGACAGAATCTCACTCGCAGCACAGCACG
TACTTGGACGAATGCAATGTCACTGTGGTGCGTCGGCGGTTCACGCGGCA
CCTTCTCATCGACCCATGCGCGCCACCTCCGCGCAACGAACGAACACTGC
ACGCCGCGCGCAGCTGGAGATCATGGCCGCGCAGCAGGAGCAGCTGCAGG
CGACGGGCTCGTCGCTCGTCGCGCTGCGCTCCGCGATCCGCTGGAAGGCC
GTCGGCAAGACGCTGCGCAAGCTGTACGAGGCGACCATCGCATCCATCAC
GGCGTCGACGTTCGAGGCCGCGGGGCGCTTCACCATGGCCATGTACTGCG
GCGACGCGCTGCGCGACGACATGCGCACGCTGCTGGGGCCGTCGATAGAC
CCGCTGGCGTACCAGGTGCGGTTTTTTTTTCTGTGTCAGTCGGAGCTGCG
TCCAGTTTTACGTTGAAGTTTAGGCCAATGTGCATCTCAGAGCGCGCCGG
GCCGCTAAATAGCTGGCATGCCGGGTGGGGGCTTGTTGCTGTGGGTGAAG
TTGAAGTTCAAGAGGGAGCTGAGGTGAAGTGCTCATGTGCAACGACATGC
GCACGCTGCTGGGGCCCTCCATAGACCCGCTGGCGTACCAGGTGCGCATT
GAACAATTAATTGTTGGCTGTGGCTGAAGTTCAAGTTGTTGGCTGTGGGT
GAGCTCCAAGTTCCAGGGCAAGCTCCGGTGAACTGATCTTGCGCGACGAC
ATGCGCATGCTGCTGGGCCCCTCCATAGACACGCTGGCGAACCAGGTGCG
AGTCGTTGGCTGTGGGTGAAGTTCAGGCTGTTGGGTGTGGCTGAAGTTGA
AGTTCAAGTGGGAGCTCTCAGGTGAAGTGCTCACGAGCGACGCTGCTGGG
CCGCTCGTGGGCCCATGGGCTTTGCTTGCCTACACAAGTTGACGTATTAC
TGTATACTCGGAAGTACTCTATTGAACAAAGATCCTAGCGGCGTTTTTAC
TTGTTCCGTCATTCACACCCTCGTGATGGCATTGAATACTGGAACAAAAA
TCTGGACCATCCCCGTTAAGATGACGGCTATCCACTGCGCGCAGCATGTA
CCGCCAAGTACTACTTCTTATGTGTGGTTCTCGCTGACGGCGAAAGCCCA
AATGGTCGATATAGTGAAACGGGCCATTACCAGCTGAAGTTGAAATTCCA
ACAGGAAGCTCAGATCAATTGCTCCATGTCTGGAGACTGTTGGAACGAGC
GCCGTTCTGTAGTCAGGTTGCACATCAAGTTGTGCACTTGGCGTTGTGCT
TTGTTCGAGATCAGTTCGAGATCAGTTCAAGATCTTTTGCATGCTTGACA
CTGCAAGCCTGGGCTGGAATGAGACGCACGCACGACGACATGCGCGTGCT
GCTGGACGCCTGTATAGACCCGCTGGTGGAAACCGAAGTGGTGCATTTAA
AGGTTCATGCTTACTTTCTTGCTTTTGGATGGCATGTCCACGATAAGCAC
GGCTTTGCCTGGGCTTCTGTGTGACACTGACGTGCCAGGCGCAGCACGGC
GTTGTGAAGTTCAAGTTGAGTTTGAGTCTGACCGTATGCCGAGGGTGATG
ACAGCGGCAACAGTTCCCCAGCGGGGGCAAAGGGGTGGCGTAGAGACCCT
TGTCAAGTGTTTGTGAGCTGCATGTGCAGCCTAGGCCTTTATGACGTGTC
TGTCTGGTAGGACGTGCAGTGTTTTTGGGGCCCAGCCGCACCAGCAGCGC
CTCGCATTATGCCCTCATCGCCAACGCATTTGAGCTGTCATTCGAAATCC
CCTTAACTGCGCAGATCGCAGAGTTCAGGGCAATGCGAAGAACACTGATG
CTCCGCATCTGCTGCGCGTGAGATCTGCTCAGCTAACCAGCAGCGCTTTG
TCATGATCGGAAACCTCAACTGCGATCAGAAACCTCAACTGCGCAGGTGG
CGGAGTTGAAGGGCAACGTGGAAAGCATCATGATGTCTATATCTGCTGTT
TGTGCAGAACCGGCTGGCCCAGCCACAACAGTAATACTCGACATGCTCTC
GTCGTTGCCGCACACAAATATCGCCACCGCAACACCACGCCAGCAACGCT
CAACGTGCTCTGCACTTGCCACACTCAAATCATGCAACCCCAAAACCGCC
CCAACGCTCTCATCTTTGCCACATGCGATCGGAAACCTCAATTCGGCAGG
CTGCAGAGGTGAAGGGCAACGTGGAGAACAACTGATATCTGCATTTGCGT
GTGCAGATCTGCTCAGCTATACTTGTTGGCTCTCGTCTTTGCCACATGCA
ATTGGAAACCTCAACGATACTTCAACTGCGCAGGTGGCAGACGGGAAGGG
CACCGTGGAGAGCATCACGATGTCTGTATTTGCTGCGTGTGCCGATCTTC
TCAGCCATACTTGCCGTACTCTCATCTTTGCCGCATGCAATCGGAAACCT
CAACTCCGCAGGTGGCAGAGGTGAAGGGCAACGTGGAGAGCATCATGATG
GGCCCGTCGGCCGCGCGCGCGGCGTTCTTTGGCCTCGCCGCCACAGCAGT
GCTCCTCGTCATGTTCTACGAGGAGCCCAACTGGGCTCTCAAGGTGTCGC
TGTGCTACCTGGGGTCGGGCGTCGTGGTGGGCTACTTGAAGTCGGTAAGA
GTTGAAGTTAACAAGACGCTGTCGCTGTTGTAGCAATACATTTATGCGGA
AACGTGGCGGGTGAATTGAGGTTGGCAAGGGCACTCGCTGCACGTAGTTT
CAGTTGCATCAGTGAGTTGCTGTTGCATCAGTTCGGTTGCGGAAAGATGT
CGGCAGTTGGCGGTTGGAGCAGCAGCTATGCAACATTCTGGCGACCTCTC
AAGTGTGCCAGCGTCAGCTCTTGCGTGCACTTGCTGACGTACAGCCCATT
GCACATTCAACACGCCCTCACAACGGTATCAGCGCTGGCGCACTCGCTTC
TAGTGCATGCAGCATGACCCTCCTCTACAAACATTTGGTACCGAACACAT
GAGACCTTGTCATACTGAACACCCATGCCTCGAACGCTAAAAAGCTTGCA
CACAGAAGTCTTTTTTGCCTACTGTGGATACGGTGGCACTGTTTGACTCG
TGGCCAATGACTGCAGCGGCGGCGACCACGGTTAGTGGTGGAAGGCACTT
GCGGCTAACCATCCCTTGTCACCTAGGGCTCAATGATCTTTTGATTCGGT
TTTCATTTGGTAAATCACCATCACGTATTCAGCTGGCTCTCGCAGGCGTG
GCATCTGGTGTGTGTCTTCACTGGCGCGTGGGACGCGGATGGCACGCCAT
GTGACCCCACCCCCCCCTGCACCCCGCCGCCCCCTGCTTCCCCCACCCAA
AAGCCTCATCTCATCATGTGTTTTCGCTGGCGCATAGGATGGGCACGGCG
CGCCACCTGACACCCCCCCCCCCCCATCATAGTCTTTCAGCCAAGTGCTG
CACCCACCGTCGCCTGCCTGCACCCACCAGGCGCTCCTGCCCACTGGAAT
ACAGTCGCTGGGCACTTGAATACAGTCGCTGCTACACGCTCGCTGACACA
ACGCGCCATGGCTGTCAAAGCACAAGAACTGACCCCCCCCTGCCCCCTGC
CCCCCCACCAAACCTCCCCCCAGGTGGTGTGCCCGTTCGCGGAGCGCCCA
TGACACCTAGACCTCCCGCCCCCCCGCCCCCTGCATCCCCACCAAACCCT
CATTCCATCATGTGTTTCCGCTGGCGCGTAGGATGGGATGGCGCACCATC
TGACCCCCCCCCCCCCCCCCCCCCCCGGCCCCCCCCACCCAAACCTCATC
CCATCGTGTGTTTTCGCTGGCGCATGGCGCGCCACCTGACACCACCCCCC
CCCAATGTGGTCTCATGCCAGGTGGTGTGCCCGTTCGCGGAGCGCGCCGG
CGTGCGCCTGCGCCCGCGCTACTGGGTCCTCGCGCACCTCCTCATCATGG
GCGTCGGCTGGCGCTTCCACCTCGCCAACTGCCCGCTGCTGCGCGCGCTG
TGCCTGCCGTTCATCCACGCGCTCGAGGCGGGCAACACGCTGCTCAACTC
GTTCAGCATGTCCGCGGCGCACTACCTGCACCGCGAGCAGGAGCTCGTCG
CGCACGCCGTCGCGGACGGCGCGCACGCGATACAGGCCGCCGCCGCCGCG
CGCCTGCACCATCCGCAGTAA
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Coding sequence (CDS) from alignment at Contig_161:44707..50277+

>mRNA_13100 ID=mRNA_13100|Name=jgi.p|Trimin1|177876|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1200bp|location=Sequence derived from alignment at Contig_161:44707..50277+ (Tribonema minus UTEX_B_3156 )
ATGTCCACCACAGATCCTCTGTCCATCGATCCAGTCATCACAAAGCAGCA
GGGCAAAAATGCAGCCCGAAACGAACTTATCCTCGAGCGAGTGGAAGCTT
TGGCGCCCAAGGTAGCTTTGGTGACGACGCCGCTGTGGCGGGTGACGAAG
CTGCTGTTCGGTCTGTCGATCCTCTTCTATGGTCTCAACTTCAAGACCCT
GGCTCTTCACATAATCATCTTCCGGATCAGCGGGTACAAGGACGTTATGC
AGCACATGGGCGAGCTGCAGTCGCACTACACGAAGGTCCGCGCCGCCACG
GAGGCGGCGGCGAAGAACACCAAGTCCCTGAACGAGTCGCTGGCGCAGAA
AGCGAAGCGGCGTGAGGCACGCGAGAAGATGCTGGTGGACCGCCAGCAGA
TGCTCAAGGACGGGCGCATCACCGCGGAGGAGGCGCAGGCGTTCATCGCC
AAGCACAGGGAGGAGCTGGAGATCATGGCCGCGCAGCAGGAGCAGCTGCA
GGCGACGGGCTCGTCGCTCGTCGCGCTGCGCTCCGCGATCCGCTGGAAGG
CCGTCGGCAAGACGCTGCGCAAGCTGTACGAGGCGACCATCGCATCCATC
ACGGCGTCGACGTTCGAGGCCGCGGGGCGCTTCACCATGGCCATGTACTG
CGGCGACGCGCTGCGCGACGACATGCGCACGCTGCTGGGGCCGTCGATAG
ACCCGCTGGCGTACCAGGTGGCAGAGGTGAAGGGCAACGTGGAGAGCATC
ATGATGGGCCCGTCGGCCGCGCGCGCGGCGTTCTTTGGCCTCGCCGCCAC
AGCAGTGCTCCTCGTCATGTTCTACGAGGAGCCCAACTGGGCTCTCAAGG
TGTCGCTGTGCTACCTGGGGTCGGGCGTCGTGGTGGGCTACTTGAAGTCG
GTGGTGTGCCCGTTCGCGGAGCGCGCCGGCGTGCGCCTGCGCCCGCGCTA
CTGGGTCCTCGCGCACCTCCTCATCATGGGCGTCGGCTGGCGCTTCCACC
TCGCCAACTGCCCGCTGCTGCGCGCGCTGTGCCTGCCGTTCATCCACGCG
CTCGAGGCGGGCAACACGCTGCTCAACTCGTTCAGCATGTCCGCGGCGCA
CTACCTGCACCGCGAGCAGGAGCTCGTCGCGCACGCCGTCGCGGACGGCG
CGCACGCGATACAGGCCGCCGCCGCCGCGCGCCTGCACCATCCGCAGTAA
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