mRNA_12957 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|350710 vs. uniprot
Match: A0A835YLU4_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLU4_9STRA) HSP 1 Score: 1118 bits (2893), Expect = 0.000e+0 Identity = 619/619 (100.00%), Postives = 619/619 (100.00%), Query Frame = 1 Query: 1 MRHDAASSRKASPAVDPISPAFEHGRNRRDHTWWARLTAPLKPRANSLSAAMVKERVLTLPLALSTLPPLSLTTNFSNICGHGSFLMLALGYMESDVMMLRVFSAGGIVLSVLFQYYRPQPLWIPISWNTLFLLINGGMIAALISERRKADHLDDAEERAVYEEMFCKLGLSAVELMHVMRLAEQQILPAGTTIAACGQPLDKPYLITDGTVGLXXXXXXXXXVTDHDGDPISSLACSSRLQSSTAXXXXXXXXXXXXXXXXXXXXXXTRHQFVGSMAFLRFLNTVHDHERDRDNERAVLNSLLAALAAELDPEHWEIDPDGRVVAVAAPHGEGQGGVQAGXXXXXXXXXXQQQGVAAVAAGEAAQEDEQEESEESLCISSTTVRTTTECRVFAWDFHLLRAYLKTHPLEGNAMQVTISADLTRKLDQSRDPHIRYRQLLLTALGGGEVLPCEKNKLQHYREAHGITTEEHEEMLLDLGWTRSDYTTGYQRKAITSAFAAYEDLLHQELKNGRLNEEGRARLRRFRSQSNIDATKHLLALAKLGWTYEQYEMGTQEGGSHGGVMPARLLTRKYSNLNSNSNLVMGGGGQQGAMKVSASACAPSLRSRPSTMGSASTVNS 1857 MRHDAASSRKASPAVDPISPAFEHGRNRRDHTWWARLTAPLKPRANSLSAAMVKERVLTLPLALSTLPPLSLTTNFSNICGHGSFLMLALGYMESDVMMLRVFSAGGIVLSVLFQYYRPQPLWIPISWNTLFLLINGGMIAALISERRKADHLDDAEERAVYEEMFCKLGLSAVELMHVMRLAEQQILPAGTTIAACGQPLDKPYLITDGTVGLXXXXXXXXXVTDHDGDPISSLACSSRLQSSTAXXXXXXXXXXXXXXXXXXXXXXTRHQFVGSMAFLRFLNTVHDHERDRDNERAVLNSLLAALAAELDPEHWEIDPDGRVVAVAAPHGEGQGGVQAGXXXXXXXXXXQQQGVAAVAAGEAAQEDEQEESEESLCISSTTVRTTTECRVFAWDFHLLRAYLKTHPLEGNAMQVTISADLTRKLDQSRDPHIRYRQLLLTALGGGEVLPCEKNKLQHYREAHGITTEEHEEMLLDLGWTRSDYTTGYQRKAITSAFAAYEDLLHQELKNGRLNEEGRARLRRFRSQSNIDATKHLLALAKLGWTYEQYEMGTQEGGSHGGVMPARLLTRKYSNLNSNSNLVMGGGGQQGAMKVSASACAPSLRSRPSTMGSASTVNS Sbjct: 1 MRHDAASSRKASPAVDPISPAFEHGRNRRDHTWWARLTAPLKPRANSLSAAMVKERVLTLPLALSTLPPLSLTTNFSNICGHGSFLMLALGYMESDVMMLRVFSAGGIVLSVLFQYYRPQPLWIPISWNTLFLLINGGMIAALISERRKADHLDDAEERAVYEEMFCKLGLSAVELMHVMRLAEQQILPAGTTIAACGQPLDKPYLITDGTVGLXXXXXXXXXVTDHDGDPISSLACSSRLQSSTAXXXXXXXXXXXXXXXXXXXXXXTRHQFVGSMAFLRFLNTVHDHERDRDNERAVLNSLLAALAAELDPEHWEIDPDGRVVAVAAPHGEGQGGVQAGXXXXXXXXXXQQQGVAAVAAGEAAQEDEQEESEESLCISSTTVRTTTECRVFAWDFHLLRAYLKTHPLEGNAMQVTISADLTRKLDQSRDPHIRYRQLLLTALGGGEVLPCEKNKLQHYREAHGITTEEHEEMLLDLGWTRSDYTTGYQRKAITSAFAAYEDLLHQELKNGRLNEEGRARLRRFRSQSNIDATKHLLALAKLGWTYEQYEMGTQEGGSHGGVMPARLLTRKYSNLNSNSNLVMGGGGQQGAMKVSASACAPSLRSRPSTMGSASTVNS 619
BLAST of jgi.p|Trimin1|350710 vs. uniprot
Match: A0A835ZD23_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD23_9STRA) HSP 1 Score: 552 bits (1423), Expect = 6.790e-188 Identity = 311/554 (56.14%), Postives = 359/554 (64.80%), Query Frame = 1 Query: 154 MVKERVLTLPLALSTLPP---LSLTTNFSNICGHGSFLMLALGYMESDVMMLRVFSAGGIVLSVLFQYYRPQPLWIPISWNTLFLLINGGMIAALISERRKADHLDDAEERAVYEEMFCKLGLSAVELMHVMRLAEQQILPAGTTIAACGQPLDKPYLITDGTVGLXXXXXXXXXVTDHDGDPISSLACSSRLQSSTAXXXXXXXXXXXXXXXXXXXXXXTRHQFVGSMAFLRFLNTVHDHERDRDNERAVLNSLLAALAAELDPEHWEIDPDGRVVAVAA-------PHGEGQGGVQAGXXXXXXXXXXQQQGVAAVAAGEAAQEDEQEESEESLCISSTTVRTTTECRVFAWDFHLLRAYLKTHPLEGNAMQVTISADLTRKLDQSRDPHIR---YRQLLLTALGGGEVLPCEKNKLQHYREAHGITTEEHEEMLLDLGWTRSDYTTGYQRKAITSAFAAYEDLLHQELKNGRLNEEGRARLRRFRSQSNIDATKHLLALAKLGWTYEQYEMGTQEG------------GSHGG---VMPARLLTRKYSNLN 1731 M +ERV+ L + +P LS TN+SN+CGHGSFLMLALGYMESDV++LRVFSAGGIVLSVLFQYYRPQPLWIPISWNT+FLLINGGMIA L++ERR+A LD EER ++++MF KLGLSAVE +H++RLAE++ LPAGTT+A +P DK YLI DGT V DGD I ++ QFVGSMAFLRFLN V +HERDR+ ER V++SLLAALA ELDPEHWEI+PDG VVA A PH S C+ VR TTEC V+AWDFHLLRAYLK HPLEGNAMQVTISADLTRKLDQSRDPHIR YRQLLLTAL GGE+LP EK KLQ +RE H IT EH+ ML LGWT+ DY TGYQ+KAIT++FAAYE +L QEL+ G LNE+GRARLRR+RSQSNI+ +HLLA+AKLGWTYEQYEMG E G H V AR+L+RK SN N Sbjct: 1 MTRERVVCLRSPIGEVPQAQLLSFKTNWSNLCGHGSFLMLALGYMESDVLLLRVFSAGGIVLSVLFQYYRPQPLWIPISWNTIFLLINGGMIALLVNERRQATRLDSTEERELFDQMFAKLGLSAVEFLHLIRLAERETLPAGTTLATFNEPQDKVYLIIDGTA----------EVQGGDGDLIGHIS---------------------------------NFQFVGSMAFLRFLNEVQEHERDRNRERQVVSSLLAALANELDPEHWEIEPDGTVVATATMAVDPHMPHSLHPF---------------------------------------SWCVCMYAVRATTECHVYAWDFHLLRAYLKRHPLEGNAMQVTISADLTRKLDQSRDPHIRQVEYRQLLLTALSGGELLPTEKRKLQRFRENHDITLAEHDAMLAQLGWTKPDYETGYQQKAITASFAAYERMLQQELRGGTLNEDGRARLRRYRSQSNINPQQHLLAIAKLGWTYEQYEMGQNEXXXXXXXXXXXXTGGHNVSSLVTQARMLSRKLSNQN 472
BLAST of jgi.p|Trimin1|350710 vs. uniprot
Match: D8LD28_ECTSI (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD28_ECTSI) HSP 1 Score: 273 bits (697), Expect = 7.230e-79 Identity = 186/532 (34.96%), Postives = 262/532 (49.25%), Query Frame = 1 Query: 142 LSAAMVKERVLTLPLALSTLPPLSLTTNFSNICGHGSFLMLALGYMESDVMMLRVFSAGGIVLSVLFQYYRPQPLWIPISWNTLFLLINGGMIAALISERRKADHL-DDAEERAVYEEMFCKLGLSAVELMHVMRLAEQQILPAGTTIAACGQPLDKPYLITDGTVGLXXXXXXXXXVTDHDGDPISSLACSSRLQSSTAXXXXXXXXXXXXXXXXXXXXXXTRHQFVGSMAFLRFLNTVHDHERDRDNERAVLNSLLAALAAELDPEHWEIDPDGRVVAVAAPHGE-----------------GQGGVQAGXXXXXXXXXXQQQGVAAVAAGEAAQ-EDEQEESEESLCISSTTVRTTTECRVFAWDFHLLRAYLKTHPLEGNAMQVTISADLTRKLDQSRDPHIRYRQLLLTALGGGEVLPCEKNKLQHYREAHGITTEEHEEMLLDLGWTRSDYTTGYQRKAITSA-----FAAYEDLLHQELKNGRLNEEGRARLRRFRSQSNIDATKHLLALAKLGWTYEQYEMGTQ 1665 L AMVKER + T TT SN CGH SF++LAL Y+E+DV+ LR +A GI LS+LFQ+YR QPLWIPI WN +FLLIN MI L+ E+ +A H+ DD E+ ++E+F + L+ V+ + +M LAE++++ GT ++ GQP ++ +LI +G + + A L+ QFVGSMAF RF+ ++S G GGV + V ++A A E ++ + S+TTV TT+ + WD HLLRA++K PL G A+Q ISADLTRK+DQSR P RYR LL AL GG + P EK KL YR+ HGI++EEH E+L + WT+ ++ G+Q K +T F YE LL +EL G++ ++GR LR FR+++ IDA +HL+AL K GWT + YE+G + Sbjct: 21 LRDAMVKERRPLQFMGCQT------TTTASNQCGHLSFVILALAYLETDVLALRASAASGIGLSILFQFYRAQPLWIPIGWNGVFLLINVSMIGLLLKEKSEAAHIGDDPEQARTFQEVFAPVELTPVDFVRLMDLAERRLVAKGTHLSEEGQPQEEVFLIVEGAAEVE-----------------AESAAVGHLEQK---------------------------QFVGSMAFNRFMQASASPTTTSPTVPTDISSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNVPGGGGVFKEAKEVALNVLRRDSIVGSMAQSFVADAEGDRRHGGGQMERSATTVTATTDVVAYVWDMHLLRAFIKRRPLAGAALQNAISADLTRKVDQSRGPEERYRLLLAEALDGGVITPIEKKKLTRYRDMHGISSEEHRELLKEHEWTKEEFEAGFQ-KGVTPRDGSKHFLNYEALLRRELAKGKVEDDGRQSLREFRTRAGIDAQEHLIALEKQGWTADDYEVGAK 501
BLAST of jgi.p|Trimin1|350710 vs. uniprot
Match: D8LD37_ECTSI (Cyclic nucleotide-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD37_ECTSI) HSP 1 Score: 248 bits (633), Expect = 2.780e-70 Identity = 167/521 (32.05%), Postives = 254/521 (48.75%), Query Frame = 1 Query: 118 PLKPRANSLSAAMVKERVLTLPLALSTLPPLSLTTNFSNICGHGSFLMLALGYMESDVMMLRVFSAGGIVLSVLFQYYRP--QPLWIPISWNTLFLLINGGMIAALISERRKADHL-DDAEERAVYEEMFCKLGLSAVELMHVMRLAEQQILPAGTTIAACGQPLDKPYLITDGTVGLXXXXXXXXXVTDHDGDPISSLACSSRLQSSTAXXXXXXXXXXXXXXXXXXXXXXTRHQFVGSMAFLRFLNTVHDHERDRDNERAVLNSLLAALAAELDPEHWEIDPDGRVVAVAAPHGEGQGGVQAGXXXXXXXXXXQQQGVAAVAAGEAAQEDEQEESEESLCI--SSTTVRTTTECRVFAWDFHLLRAYLKTHPLEGNAMQVTISADLTRKLDQSRDPHIRYRQLLLTALGGGEVLPCEKNKLQHYREAHGITTEEHEEMLLDLGWTRSDYTTGYQRKAITSAFAAYEDLLHQELKNGRLNEEGRARLRRFRSQSNIDATKHLLALAKLGWTYEQYEMGTQ 1665 P +P N L M++ER P+A + L+ TN +CGH SF +L L Y+E+DV+ LR A G L+V+F +R P+WIPI WN FLL+N M+ L++ER++AD L +D E+ +Y ++F + LS V+ + +M +AE++++P G + G P + LI +GT + +G +S + F+GSMAF+R L+ L+ D H+ + DG + A GQ ++ G +A D+ + ++++ + S +TV T++ V+ WD H LR ++K P+ G +Q I+ DL K+DQSRD H YRQLL L GG V E+ LQ YRE HGI+ +EH + L D WT ++ G+Q T F YE LL +EL G++ + R+ LR+FRSQ IDA +HL+A+ K GWT + YE G + Sbjct: 88 PFQPLMNRLHPIMIRERR---PMAWCGIEALNTVTNAGALCGHFSFALLTLAYLETDVLKLRYLVACGSTLNVMFNLFRVVGPPVWIPIKWNAGFLLLNTIMVILLMNERQEADRLKEDPEQARIYHDIFESVNLSPVQFLRLMDVAERRVVPKGANLKDGGAPHKEVILIIEGTAEVKS-----------EGVAVSHMEKGG---------------------------------FIGSMAFMR------------------LSKKLSVAKLASDDGHY-VYKDGGMFRKAWEAVLGQ---------------LRRDGSVVGEVAQAVVGDKTLKRQDTMGLERSMSTVTATSDVVVYVWDQHALREFIKRRPMIGAFLQKAITVDLVNKVDQSRDHHEHYRQLLAETLDGGRVTSTERKNLQRYREGHGISFDEHLDRLRDNKWTEEEFEAGFQMGVATQNFLEYEALLRKELAKGKVKPDARSNLRKFRSQVGIDAQEHLIAVEKQGWTADDYEAGAK 527
BLAST of jgi.p|Trimin1|350710 vs. uniprot
Match: D7FN16_ECTSI (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN16_ECTSI) HSP 1 Score: 217 bits (553), Expect = 1.240e-58 Identity = 157/504 (31.15%), Postives = 236/504 (46.83%), Query Frame = 1 Query: 208 LSLTTNFSNICGHGSFLMLALGYMESDVMMLRVFSAGGIVLSVLFQYYRPQPLWIPISWNTLFLLINGGMIAALISERRKADHLD-DAEERAVYEEMFCKLGLSAVELMHVMRLAEQQILPAGTTIAACGQPLDKPYLITDGTVGLXXXXXXXXXVTDHDGDPISSLACSSRLQSSTAXXXXXXXXXXXXXXXXXXXXXXTRHQFVGSMAFLRFLNTVHDHERDRDNERAVLNSLLAALAAELDPEHWEIDPDGRVVAVAAPHGEGQGGVQAGXXXXXXXXXXQQQGVAAVAA--------GEAAQEDEQEESEESLCISSTTVRTTTECRVFAWDFHLLRAYLKTHPLEGNAMQVTISADLTRKLDQSRDPHIRYRQLLLTALGGGEVLPCEKNKLQHYREAHGITTEEHEEMLLDLGWTRSDYTTGYQRKAI----TSAFAAYEDLLHQELKNGRLNEEGRARLRRFRSQSNIDATKHLLALAKLGWTYEQYEMGTQEGGSH 1680 L+ TT +CGH SF + L Y+E+D + RV G L + F YYR PL I I W TL L++N ++A L +ER +A+ L+ D E+ ++EE+F L+ VE + +M LA++++ G I G+P + +LI +GT + +G+ +S L F+GSMAF RF + D E N++ ++ +D E +G V +G G G +Q + A G ED+ E S TTV T++ +AWD H L A+LK PL G ++Q ++ D K+ QSR RYR LL+ +L G + P + KL+ YRE H I+ E H+ L + GWT +Y G+Q+ ++ F YE L+ +EL G + E R+ LR+FRSQ++IDA +HLLA+ K GWT + YE G + H Sbjct: 99 LNFTTTIGMLCGHASFGIATLVYLETDPLTTRVMVFTGATLGLFFSYYRHPPLIISIKWLTLTLILNSFLLAILWNERAEAEELNNDPEKSRIFEELFMPFDLNPVEFLRLMDLADRRVWMKGNDICQAGRPHEDMFLIVEGTAEVKS-----------EGETVSHLEPGG---------------------------------FIGSMAFQRFTQEA-EAPVDVTPEVVRRNTINSSDFVYIDSIILE---NGSSV-----YGGGDGRSTRKIVKEAFLHFMRQDHIIGKVARSLVSDVMGMRVHEDDMER-------SKTTVTATSDVVTYAWDMHELHAFLKRRPLIGASLQKAMAEDFINKVYQSRGHEERYRLLLVESLDPGSINPIGREKLRRYRETHHISEEVHKGFLKEQGWTEEEYYMGFQQNKAPRDGSARFLEYEALVSRELSGGEVTPEARSNLRKFRSQAHIDAQEHLLAIQKQGWTADDYEAGEKGAAGH 542
BLAST of jgi.p|Trimin1|350710 vs. uniprot
Match: A0A7S3HEK0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HEK0_9STRA) HSP 1 Score: 172 bits (437), Expect = 7.120e-42 Identity = 150/610 (24.59%), Postives = 266/610 (43.61%), Query Frame = 1 Query: 97 WWARLTAPLKPRANSLSAAMVKERVLTLPLALSTLPPLSLTTNFSNICGHGSFLMLALGYMESDVMMLRVFSAGGIVLSVLFQYYRPQPLWIPISWNTLFLLINGGMIAALISERRKADHLDDAEERAVYEEMFCKLGLSAVELMHVMRLAEQQILPAGTTIAACGQPLDKPYLITDGTVGLXXXXXXXXXVT-DHDGDPISSLAC-----SSRLQSSTAXXXXXXXXXXXXXXXXXXXXXXTRHQFVGSMAFLRFLNTVHD------HERDRDN---------------------ERAVL------NSLLAALAAELD--------PEHWEIDPDGRVVAVAAP--------HGEGQGGVQAGXXXXXXXXXXQ--QQGVAAVAAGEAAQEDEQEESEESL------CISSTTVRTTTECRVFAWDFHLLRAYLKTHPLEGNAMQVTISADLTRKLDQSR--DPHIRYRQLLLTALGGGEVLPCEKNKLQHYREAHGITTEEHEEMLLDLGWTRSDYTTGYQRKAITSAFAAYEDLLHQELKNGR---LNEEGRARLRRFRSQSNIDATKHLLALAKLGWTYEQYEMGTQEGGSHGGVMPARLLTRKYS 1722 W+ +A + + +SL A MV + ++ L T + S++ GH SF++LAL Y+E+D ++LR+F+A G+ LS++FQYYR +PLWIPI WNTLFL+IN MI L + +A H +E + ++E F K G++ V+ +H+ + AE+ + G I + + + + G + + + D +S L+ +++LQ M LR + H+ HE + E A+ N AL ++ P +D G V++ + H E ++ Q VA A +E ++++ E + + V +C ++ W F+ LR+ ++ +P G A + +S D+ +K+ +S +P RY+ +L A+ GGE+ K L +R H I+ ++H +L GW+ D+++G++ + S Y L Q L++ L EE R LR FR ++ I+++ HL AL KLGWT +++E+G+Q ++ +Y+ Sbjct: 35 WFKETSAYAQNKFHSLDATMVSQSKISFQLPFKATKS-EYTMSLSDLAGHSSFILLALSYLETDFLLLRMFAASGVSLSIIFQYYREKPLWIPIRWNTLFLVINVVMIGLLWKKEHEA-HTIPSETKHLFESTFMKKGMTPVDFLHLCKAAERIEVKKGEVIISEKLKNSRVFHVRSGKLSVTQNGTLVRTIQPDQFVGSMSFLSWEDKIDAAQLQRKLHKDTLKNWSNKNSDTELFLPLLIIMEDLFERMNLLRHHHPTHEATCKVHHETEAAQHECSAKGHXXXXXXXXXXXXAEGAIFLPEEETNGFFDALFDDVPVSELMDDAPYGITVDELGNVISSESSYPNYTEDDHSERADEPKSSVLGQYLAASYSFVSQVVAPTTAESVPKEPKEQKHEVPVENQGGGMMGYADVVAEEDCILYFWSFNTLRSLIELYPSLGLAFERALSDDINKKMSRSMQSEPLQRYKLMLSGAVSGGEMSDTSKQILADFRAKHQISQKDHFALLEGFGWSSHDFSSGFKGAPLISIQEEYFAQLRQALEHSHEVPLTEEARTELRVFRLRNGINSSAHLAALKKLGWTVDEFEIGSQNPDHASAKETRAIVAHQYA 642
BLAST of jgi.p|Trimin1|350710 vs. uniprot
Match: D7FUU0_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUU0_ECTSI) HSP 1 Score: 159 bits (401), Expect = 3.370e-39 Identity = 128/483 (26.50%), Postives = 198/483 (40.99%), Query Frame = 1 Query: 223 NFSNICGHGSFLMLALGYMESDVMMLRVFSAGGIVLSVLFQYYRPQPLWIPISWNTLFLLINGGMIAALISERRKADHLDDAEERAVYEEMFCKLGLSAVELMHVMRLAEQQILPAGTTIAACGQPLDKPYLITDGTVGLXXXXXXXXXVTDHDGDPISSLACSSRLQSSTAXXXXXXXXXXXXXXXXXXXXXXTRHQFVGSMAFLRFLNTVHDHERDRDNERAVLNSLLAALAAELDPEHWEIDPDGRVVAVAAPHGEGQGGVQAGXXXXXXXXXXQQQGVAAVAAGEAAQEDEQEESEESLCISSTTVRTTTECRVFAWDFHLLRAYLKTHPLEGNAMQVTISADLTRKLDQSRDPHIRYRQLLLTALGGGEVLPCEKNKLQHYREAHGITTEEHEEMLLDLGWTRSDYTTGYQRKAITSAFAAYEDLLHQELKNGRLNEEGRARLRRFRSQSNIDATKHLLALAKLGWTYEQYEMGTQEG 1671 + S GH SF+ L +G++E++++ LRV++A G+ S++FQYYRPQPLWIPISWN +FL IN GM L+ E+R A D E A+Y++ F + GL+AV+ M + ++E AG +A + YL+ +G + + G+ I+ + +F G E+ R R L WE VV V+ P + V+ G +V +W F LR L +P ++ + KL + DP ++YRQLL L G V EK++L+ R+ + H L GW+ ++ GYQ + YE L + L++G +N++GRA+LR R + ID+ H+ L KLGW+ +Q E GT G Sbjct: 2 SLSEAAGHLSFVCLGIGFLETELLPLRVYAAAGVSASIVFQYYRPQPLWIPISWNFVFLAINVGMAGVLLKEKRDATR-QDQETAALYDKTFRESGLTAVDFMKIRGISEDSRHTAGDVLAEQDVTQRRLYLVMEGELQV-----------SKGGNDIAPVKAG---------------------------------EFAG--------------EKARFGCRIFLQ--------------WET-----VVEVSRPKVSPKVKVKHGG-----------------------------------------------AKVTSWQFDELRDLLAHNPNMSVRFHAALARAMVSKLVDTHDPAVKYRQLLTGVLVDGVVTTMEKDELEKMRQDMNVDEATHTAELKTAGWSTQEFDQGYQDDFSSRT---YEALAKEVLRDGTVNDKGRAKLRIHRQNNGIDSLHHMRVLKKLGWSLDQLEEGTTAG 356
BLAST of jgi.p|Trimin1|350710 vs. uniprot
Match: A0A7S2ICB7_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2ICB7_9STRA) HSP 1 Score: 122 bits (306), Expect = 2.050e-26 Identity = 65/168 (38.69%), Postives = 97/168 (57.74%), Query Frame = 1 Query: 187 ALSTLPPLSLTTNFSN--ICGHGSFLMLALGYMESDVMMLRVFSAGGIVLSVLFQYYRPQPLWIPISWNTLFLLINGGMIAALISERRKADHLDDAEERAVYEEMFCKLGLSAVELMHVMRLAEQQILPAGTTIAACGQPLDKPYLITDGTVGLXXXXXXXXXVTDHD 684 A ++ P LS T+N S + GH +F + L Y DVM LR+ + GGI LS++FQYYRPQPL IP+ WN LFL +N M+AAL ER++A+++ E + F K G VE + +LA+++ L AG + GQ + K Y+IT G+ + ++ +D Sbjct: 90 ATASAPSLSSTSNMSAAVLAGHSAFFLTGLAYATKDVMHLRLLAMGGISLSMVFQYYRPQPLSIPLRWNALFLAVNAAMVAALYKERKEAENMGPEFEALFSDGDFQKRGFGRVEFYRLFQLAKREELKAGHYLKIAGQEMRKLYIITKGSATIERNGVKLQSISQYD 257
BLAST of jgi.p|Trimin1|350710 vs. uniprot
Match: A0A6H5K0X4_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0X4_9PHAE) HSP 1 Score: 119 bits (297), Expect = 4.950e-26 Identity = 58/135 (42.96%), Postives = 78/135 (57.78%), Query Frame = 1 Query: 1138 SSTTVRTTTECRVFAWDFHLLRAYLKTHPLEGNAMQVTISADLTRKLDQSRDPHIRYRQLLLTALGGGEVLPCEKNKLQHYREAHGITTEEHEEMLLDLGWTRSDYTTGYQRKAITSAFAAYEDLLHQELKNGRL 1542 S +TV T++ V+ WD H LR ++ P+ G +Q I+ DL K+DQSRD H YRQLL L GG V E+ LQ YRE HGI+ EEH + L + WT ++ G+Q T F YE LL +EL G++ Sbjct: 125 SMSTVTATSDVVVYVWDQHELREFINRRPMIGACLQKAITVDLVNKVDQSRDHHEHYRQLLAETLDGGRVTSTERKNLQRYREGHGISFEEHLDRLKENNWTEEEFEAGFQTGVATQNFLEYEALLRKELAKGKV 259
BLAST of jgi.p|Trimin1|350710 vs. uniprot
Match: A0A6H5KY10_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY10_9PHAE) HSP 1 Score: 118 bits (296), Expect = 1.340e-24 Identity = 58/136 (42.65%), Postives = 87/136 (63.97%), Query Frame = 1 Query: 223 NFSNICGHGSFLMLALGYMESDVMMLRVFSAGGIVLSVLFQYYRPQPLWIPISWNTLFLLINGGMIAALISERRKADHLDDAEERAVYEEMFCKLGLSAVELMHVMRLAEQQILPAGTTIAACGQPLDKPYLITDG 630 + S GH SF+ L +G++E++++ LRV++A G+ S++FQYYRPQPLWIPISWN +FL IN GM L+ E R A D E A+Y++ F + GL+AV+ M + ++E PAG +A + YL+ +G Sbjct: 97 SLSEAAGHLSFVCLGIGFLETELLPLRVYAAAGVSASIVFQYYRPQPLWIPISWNFVFLAINIGMAGVLLKEERDATR-QDQETAALYDKTFRESGLTAVDFMKIRGISEDWRHPAGDVLAEQDVTQKRLYLVMEG 231 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350710 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12957 ID=mRNA_12957|Name=jgi.p|Trimin1|350710|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2137bp|location=Sequence derived from alignment at Contig_69:670306..677028- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAGACACGATGCCGCAAGCAGCCGCAAAGCATCTCCTGCAGTGGATCCback to top protein sequence of jgi.p|Trimin1|350710 >Trimin1|350710|estExt_Genemark1.C_Ctg_690061 ID=Trimin1|350710|estExt_Genemark1.C_Ctg_690061|Name=jgi.p|Trimin1|350710|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=620bp MRHDAASSRKASPAVDPISPAFEHGRNRRDHTWWARLTAPLKPRANSLSAback to top mRNA from alignment at Contig_69:670306..677028- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_12957 ID=mRNA_12957|Name=jgi.p|Trimin1|350710|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6723bp|location=Sequence derived from alignment at Contig_69:670306..677028- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_69:670306..677028- >mRNA_12957 ID=mRNA_12957|Name=jgi.p|Trimin1|350710|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1860bp|location=Sequence derived from alignment at Contig_69:670306..677028- (Tribonema minus UTEX_B_3156 )back to top |