mRNA_12790 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|351387
Unique Name	mRNA_12790
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

[Close]

BLAST of jgi.p|Trimin1|351387 vs. uniprot
Match: A0A835YLE7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLE7_9STRA)

HSP 1 Score: 872 bits (2254), Expect = 1.070e-313
Identity = 625/625 (100.00%), Postives = 625/625 (100.00%), Query Frame = 1

Query:    1 MAAPARALTCAYYSWSLRKAPLAQEASAVAGVPAAVMQQRVQQAARHGPSKSLTAIAPQLHEISSQRFICAASGARRRQRARATLSARTAVPKRRAAAAQRARDFERENRRAVAVAPCCAQRLRAARRAATANGGRGRALAVLCARERLVNSEFARASQKSEVAAARRRAPLSLLAEARASDQRERFISRDVPAAAARRRALRLHADPXXXXXXXASSSTYAARLRRLRDAALCALVTERAWRAARVDAXXXXXFAAHARFAEPLVTALSAARAARACARLNFLARVVTKRYARRARGAARLLQQTWRAWRRCAQAHLQGLRLLWERYLPSPPDEGPPPKFLQAVITFRXXXXXXXXXXXDDADVAPEVRAALLLEWARRARREHVDAVRLHQQHARTHAPHRARGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGKELAVTAAVEAAHTQFDAGARCSAQLHLHRDPARDAPRLSAARAALLRAAQTARLYKALSHARAAAPPPQPATLASRAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLRRWFTPADAAELHARGVHLTAARLAAPPRPRYRTSVQS 1875
            MAAPARALTCAYYSWSLRKAPLAQEASAVAGVPAAVMQQRVQQAARHGPSKSLTAIAPQLHEISSQRFICAASGARRRQRARATLSARTAVPKRRAAAAQRARDFERENRRAVAVAPCCAQRLRAARRAATANGGRGRALAVLCARERLVNSEFARASQKSEVAAARRRAPLSLLAEARASDQRERFISRDVPAAAARRRALRLHADPXXXXXXXASSSTYAARLRRLRDAALCALVTERAWRAARVDAXXXXXFAAHARFAEPLVTALSAARAARACARLNFLARVVTKRYARRARGAARLLQQTWRAWRRCAQAHLQGLRLLWERYLPSPPDEGPPPKFLQAVITFRXXXXXXXXXXXDDADVAPEVRAALLLEWARRARREHVDAVRLHQQHARTHAPHRARGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGKELAVTAAVEAAHTQFDAGARCSAQLHLHRDPARDAPRLSAARAALLRAAQTARLYKALSHARAAAPPPQPATLASRAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLRRWFTPADAAELHARGVHLTAARLAAPPRPRYRTSVQS
Sbjct:    1 MAAPARALTCAYYSWSLRKAPLAQEASAVAGVPAAVMQQRVQQAARHGPSKSLTAIAPQLHEISSQRFICAASGARRRQRARATLSARTAVPKRRAAAAQRARDFERENRRAVAVAPCCAQRLRAARRAATANGGRGRALAVLCARERLVNSEFARASQKSEVAAARRRAPLSLLAEARASDQRERFISRDVPAAAARRRALRLHADPXXXXXXXASSSTYAARLRRLRDAALCALVTERAWRAARVDAXXXXXFAAHARFAEPLVTALSAARAARACARLNFLARVVTKRYARRARGAARLLQQTWRAWRRCAQAHLQGLRLLWERYLPSPPDEGPPPKFLQAVITFRXXXXXXXXXXXDDADVAPEVRAALLLEWARRARREHVDAVRLHQQHARTHAPHRARGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGKELAVTAAVEAAHTQFDAGARCSAQLHLHRDPARDAPRLSAARAALLRAAQTARLYKALSHARAAAPPPQPATLASRAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLRRWFTPADAAELHARGVHLTAARLAAPPRPRYRTSVQS 625

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|351387 vs. uniprot

BLAST of jgi.p|Trimin1|351387 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835YLE7_9STRA	1.070e-313	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_89	contig	Contig_89:152569..159545 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|351387\|estExt_Genemark1.C_Ctg_890019
Hectar predicted targeting category	mitochondrion
TranscriptId	351709
Track	FilteredModels1
ProteinId	351387

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351387	gene_12790	Tribonema minus UTEX_B_3156	gene	Contig_89 152569..159545 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351387	Trimin1\|351387\|estExt_Genemark1.C_Ctg_890019	Tribonema minus UTEX_B_3156	polypeptide	Contig_89 152569..159545 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_12790_14	exon_12790_14	Tribonema minus UTEX_B_3156	exon	Contig_89 152569..152680 -
exon_12790_13	exon_12790_13	Tribonema minus UTEX_B_3156	exon	Contig_89 153072..153377 -
exon_12790_12	exon_12790_12	Tribonema minus UTEX_B_3156	exon	Contig_89 154004..154110 -
exon_12790_11	exon_12790_11	Tribonema minus UTEX_B_3156	exon	Contig_89 154187..154219 -
exon_12790_10	exon_12790_10	Tribonema minus UTEX_B_3156	exon	Contig_89 154324..154562 -
exon_12790_9	exon_12790_9	Tribonema minus UTEX_B_3156	exon	Contig_89 155404..155478 -
exon_12790_8	exon_12790_8	Tribonema minus UTEX_B_3156	exon	Contig_89 155948..156084 -
exon_12790_7	exon_12790_7	Tribonema minus UTEX_B_3156	exon	Contig_89 156920..157127 -
exon_12790_6	exon_12790_6	Tribonema minus UTEX_B_3156	exon	Contig_89 157220..157314 -
exon_12790_5	exon_12790_5	Tribonema minus UTEX_B_3156	exon	Contig_89 157389..157467 -
exon_12790_4	exon_12790_4	Tribonema minus UTEX_B_3156	exon	Contig_89 158179..158390 -
exon_12790_3	exon_12790_3	Tribonema minus UTEX_B_3156	exon	Contig_89 158764..158894 -
exon_12790_2	exon_12790_2	Tribonema minus UTEX_B_3156	exon	Contig_89 159292..159384 -
exon_12790_1	exon_12790_1	Tribonema minus UTEX_B_3156	exon	Contig_89 159495..159545 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_12790	CDS_12790	Tribonema minus UTEX_B_3156	CDS	Contig_89 159495..159545 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_89:152569..159545-
coding sequence from alignment at Contig_89:152569..159545-

spliced messenger RNA

>mRNA_12790 ID=mRNA_12790|Name=jgi.p|Trimin1|351387|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1878bp|location=Sequence derived from alignment at Contig_89:152569..159545- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCAGCTCCCGCACGGGCCCTGACGTGCGCGTACTACTCGTGGTCACT
GCGCAAGGCGCCGTTGGCGCAGGAGGCGTCGGCGGTAGCTGGTGTGCCCG
CGGCGGTGATGCAGCAGCGCGTGCAACAAGCAGCGCGCCACGGCCCCAGC
AAGAGCCTGACCGCCATCGCCCCGCAGCTGCATGAGATCTCCTCGCAGCG
CTTCATCTGCGCAGCAAGCGGCGCGCGGCGGAGGCAGCGCGCGCGCGCGA
CTTTGAGCGCGAGAACCGCCGTGCCCAAGCGGCGCGCGGCGGCGGCGCAG
CGCGCGCGCGACTTCGAGCGCGAGAACCGCCGCGCCGTGGCGGTGGCGCC
GTGCTGCGCGCAGCGGCTGCGCGCGGCGCGGCGCGCGGCGACGGCGAACG
GCGGCCGCGGGCGCGCTCTCGCCGTCCTGTGTGCGCGGGAGCGCCTCGTC
AACAGCGAGTTCGCGCGCGCGTCGCAGAAGTCGGAAGTGGCGGCTGCGCG
ACGCCGCGCCCCCCTGTCGCTGCTAGCGGAGGCGCGCGCGTCAGATCAGC
GCGAGCGATTCATCTCACGCGACGTGCCTGCGGCGGCTGCGCGACGCCGC
GCTCTGCGCCTCCACGCAGACCCCAACCCGAACCCTAACCCCCATGCCTC
ATCGTCGACCTACGCGGCGCGCCTGCGGCGCCTGCGCGACGCCGCGCTGT
GCGCGCTCGTGACGGAGCGCGCGTGGCGCGCCGCGCGCGTCGACGCGCGC
GCCTGGCGCGCCTTCGCCGCCCACGCGCGCTTCGCTGAGCCGCTGGTGAC
GGCGCTGAGCGCTGCGCGCGCAGCACGCGCGTGCGCAAGACTGAACTTCC
TCGCGCGCGTGGTGACCAAGCGCTACGCGCGGCGCGCACGCGGCGCAGCG
CGGCTGCTGCAGCAGACGTGGCGCGCGTGGCGGCGCTGCGCGCAGGCGCA
CCTGCAGGGGCTGCGGCTGCTGTGGGAGCGCTACCTGCCGTCGCCGCCGG
ACGAAGGCCCTCCGCCCAAGTTTCTGCAAGCAGTGATCACTTTTCGGTGG
GAGCGCTACCTGCCGTCGCCGCCGGACGAAGACGACGCCGACGTCGCGCC
GGAGGTGCGCGCGGCGCTGCTGCTGGAGTGGGCGCGGCGCGCGCGGCGCG
AGCACGTGGACGCCGTGCGGCTGCACCAGCAGCACGCGCGCACGCATGCG
CCGCATCGCGCCCGCGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGG
CGGCAAATGCAGCGGCTGGGCCGGCGCGGCGGCGGCGGCCGCCGCTGCGG
CGGCGCGGCGCGGCGGCAAGGAGCTGGCGGTGACGGCGGCGGTGGAAGCG
GCGCACACGCAGTTTGATGCAGGGGCGCGATGCAGCGCTCAGCTGCATCT
ACACCGCGACCCTGCGCGCGACGCGCCCCGACTGAGCGCGGCGCGCGCGG
CGCTGCTGCGTGCGGCGCAGACGGCGCGGCTGTACAAAGCGCTGAGCCAT
GCGCGCGCCGCCGCGCCGCCGCCGCAGCCCGCCACGCTCGCATCCCGGGC
GCCCACGCAGCAATTGCCGCAGCAGCAGCAGCAGCAGCGGTCATCGGCAG
CAGCATCAGTGGCGGCAGCAGCGGCGGCGGCGGCTGCAGTTCAGCGCTCG
TCGTACACGCGCGAGCTGCGGCCGCAGCAGCAGCGGCCGTCGCACGGGGG
GCAGCGCGCCGCGAGACAGCGCGTCAGCGGCGCGACGTCGCCGCCGCCGC
CGCCGCGCCTGCGAAGGTGGTTCACGCCGGCAGACGCAGCGGAGCTGCAC
GCGCGCGGCGTGCACCTGACGGCGGCGCGCCTTGCTGCGCCGCCGCGGCC
GCGCTACCGCACCAGCGTCCAGTCGTAA

protein sequence of jgi.p|Trimin1|351387

>Trimin1|351387|estExt_Genemark1.C_Ctg_890019 ID=Trimin1|351387|estExt_Genemark1.C_Ctg_890019|Name=jgi.p|Trimin1|351387|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=626bp
MAAPARALTCAYYSWSLRKAPLAQEASAVAGVPAAVMQQRVQQAARHGPS
KSLTAIAPQLHEISSQRFICAASGARRRQRARATLSARTAVPKRRAAAAQ
RARDFERENRRAVAVAPCCAQRLRAARRAATANGGRGRALAVLCARERLV
NSEFARASQKSEVAAARRRAPLSLLAEARASDQRERFISRDVPAAAARRR
ALRLHADPNPNPNPHASSSTYAARLRRLRDAALCALVTERAWRAARVDAR
AWRAFAAHARFAEPLVTALSAARAARACARLNFLARVVTKRYARRARGAA
RLLQQTWRAWRRCAQAHLQGLRLLWERYLPSPPDEGPPPKFLQAVITFRW
ERYLPSPPDEDDADVAPEVRAALLLEWARRARREHVDAVRLHQQHARTHA
PHRARGSGGGGGGGGGGGKCSGWAGAAAAAAAAAARRGGKELAVTAAVEA
AHTQFDAGARCSAQLHLHRDPARDAPRLSAARAALLRAAQTARLYKALSH
ARAAAPPPQPATLASRAPTQQLPQQQQQQRSSAAASVAAAAAAAAAVQRS
SYTRELRPQQQRPSHGGQRAARQRVSGATSPPPPPRLRRWFTPADAAELH
ARGVHLTAARLAAPPRPRYRTSVQS*

mRNA from alignment at Contig_89:152569..159545-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_12790 ID=mRNA_12790|Name=jgi.p|Trimin1|351387|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6977bp|location=Sequence derived from alignment at Contig_89:152569..159545- (Tribonema minus UTEX_B_3156 )
ATGGCAGCTCCCGCACGGGCCCTGACGTGCGCGTACTACTCGTGGTCACT
GGTCACCGCGCTGGCTGGAGGTTGAGCCTCGCCATCTGCTCCCATGCAGC
GATGCCTGCACTTGAAGCAACAGCACCTCCCACGCTCCCACCGCTGCGTT
CTGCTGACCAGCGCAAGGCGCCGTTGGCGCAGGAGGCGTCGGCGGTAGCT
GGTGTGCCCGCGGCGGTGATGCAGCAGCGCGTGCAACAAGCAGCGCGCCA
CGGCGTATGCTGGGGTCGCAACATCATCTGCGCCTCGACATTGACATCAG
AGCTTGTGGCTGGTCGCAAAGTCACAGTCTCTCACCACCTACAATTGGGC
GCATTCGCACGCAACGGCGGCTGTCGTGTTATTTTTAATCACGGCAACTA
TCTTTGACATCATGCACCCCCCTTGGCGCACCTCCCTGTGGTGCAGCAAG
CAGAGGGCTGCAGCAGCGCAGCGCGCTCGCGATTTAGAAGGTATACCCAA
GACATAAATATTTACTTCAAAGCATAGATGCATAATACGAATATATGTAT
TCTATAGCGTTCAGGAGCGTGCAATTGGGCGCGCACGCACAAGGCGTCGG
CTCTCAGACTTCAATCATGCCCTGATCACCACACGCCCCTTGCGCCCCAA
GCCCAGCAAGAGCCTGACCGCCATCGCCCCGCAGCTGCATGAGATCTCCT
CGCAGCGCTTCATCTGCGCAGCAAGCGGCGCGCGGCGGAGGCAGCGCGCG
CGCGCGACTTTGAGCGCGAGAACCGCCGTGCCGTGTGTGCGAAATGTATA
GCCGCGTGCGCAGTTCATGGCGTTCAGCAGTCTGGGCATGCACAAGGGTG
CCAGTCCACAGGCTGCAATTGTGGCGCCCTCGCGCCACAAGCCGTTCAAG
AGCCCGCCGTCAGCCTCAACCCAGTTGTCTGATTCACAACGCCCAACCTC
TTGATGAACTACGTCACGAATGATGGTGTGCCTCTCGACGCCCGCTCTGC
GCAGCAAGTGGCGCGCGGCGGCGGCACGGCACGCGCGCGACCTTGACCGC
GAGAACCGCCGCCGTGACGCTGGCGCAGCACGGCGTCACCGCCACCCAAT
CTCCTGATGAACTGATTTGCGAATAATTATGTGCCTCTCAACGCCCTCTG
CGCAGCAAGCGGCGCGCGGCGGCGGCGCAGCGCGCGCGCGACTTCGAGCG
CGAGAACCGCCGCGCCGTGGCGGTGGCGCCGTGCTGCGCGCAGCGGCTGC
GCGCGGCGCGGCGCGCGGCGACGGCGAACGGCGGCCGCGGGCGCGCTCTC
GCCGTCCTGTGTGCGCGGGAGCGCCTCGTCAACAGCGAGTTCGCGCGCGC
GTCGCAGAAGTCGGAAGGTGCTGCACGGAGAGAGAGCACGTGCGGTTGAG
AACGCTTCCGGAGACTCTGCGGAAGGCGCACTCCACGGACAAACAGACGA
AAACAAAGTTGCAGAAGGTGGAAAGCGCTGCGCAGAGATTGTGTGCATGC
GGTTCAAGTTGCTCGGGATTGCAACAAACATGTTAATGTTTGTCAAGCGC
TGATAGAACCCAAGGCGAAATGAGAACCCCAGGTTCGAAACGAATGTTGA
GTTTGACAAACGCAGATATGCTTCAGCTGTACCCGAGCTAGCCTGCTTGT
GTGTTGCATTGTATCGCCAGTGTGCCAGTGTACTTTGAAGTACCGTCTGT
GTAAATCTGCATCTATCGTGTTACGCCATCCGCCTCCATGCAGACCCCAA
TCCTAACCCTAACCCTACTGCCACGCCCCCTCATCGGCGTGCTCTTGCCA
CCCCCACCCCCACCTGACACGCAACAATGCAACGACTTGCAGTCTTCACA
GTATGACCCCCCCCCCTGTTAGCGAGCACTGCCCCGCAGACGCAATAAAG
TCTTTGTGAATTTGCATCTCTGATGTTGCGCCGTGCGCCTCCACGCCGAC
CCTAACCCTAACCCCACTCCAATGCCATGCCCCCCCACCGGCGCGCTCTC
GCCACCCCCACCCCCACCAAACATGCAACTTGCTTGAAGGCTTCGCTGAA
AGACCCCCCCCCCCCCCCGGTTGCTGAGTGGCGGCTGCGCGACGCCGCGC
CCCCCTGTCGCTGCTAGCGGAGGCGCGCGCGTCAGATCAGCGCGAGCGAT
TCATCTCGTACCTCCTCTAAGACCCCAGTTTTTAGTCCTCGCTGCGTCGT
CGCCGCCATCATCGCTCCGCCCCCCACGCAGACGCGACGTGCCTGCGGCG
GCTGCGCGACGCCGCGCTCTGCGCCTCCACGCAGACCCCAACCCGAACCC
TAACCCCCATGCCTCATCGTCGACCTGTCGCCACACCACCCCCACCAGAC
ACCAACAGCTAAAAGTCTTCGCTGAATGACACTCCCCCTCCCCCCCGTTG
CTGAGCGCTGCCGCGCAGACGCGGCGCGCCTGCGGCGCCTGCGCGACGCC
GCGCTGTGCGCGCTCGTGACGGAGCGCGCGTGGCGCGCCGCGCGCGTCGA
CGCGCGCGCCTGGCGCGCCTTCGCCGCCCACGCGCGCTTCGCTGAGCCGC
TGGTGACGGCGCTGAGCGCTGCGCGCGCAGCACGCGCGTGCGCAAGACTG
AACTTCCTCGCGCGCGTGGTGACCAAGTTTGTGAGGGCGGTGGCGCGCGC
GCGCGCGCGCGCGCGCGCGCGCCGCCGCGCTGCTCACCACGTTCCTGAGC
GCTGCCTACGCGGACAACCCCCTGAGGTGCGCCGCGCGCTCACATGCGCC
CCCCCCCCCCGTCCCCTACTGCACCCCCCCGCCAGGGGAGGGGGGGGGGG
CAGTACAGAGGGAAGGCGCTAGGTTTGTGGAAGTGTTGCGTGAGAGTGCG
GCCTGGAAAGCGCGTCTCACGGCGGTGCGGACCAGCGGGTTAAACTTCAA
CATGGGCACTTTTCATGTCTGAGCGATGATGAGGCGCTGCACGCTGTGAC
CGTAGCGCCATACCTACCCCCCTCACTTGCCATTTTGCGTCGCCCATCGC
CGACTTGCCATGCCCTGCGGTGGTATGGTGCCTCGTCTCTTAAAGGCGGA
ATGCCGCAGACCTCTGCTTCTGATTATGCGCGCCTGCCCTGCCAAATGGG
CTATACGCTGCGCCCCCGTTTCAGCCATGTTTGTTTTGTACTTCAACGGA
TCGGATACTTGAAGTGCACCCCGTGCATGATGCTGTGACGCAATGCAGAG
GCACAGAGCTTGCCACTCCATAACACATCTAGCTTTGCCCAACAACAGCA
GCGCCGCGCACCGACTTTTGAATATGGCATTCGTGCAGCGGCTGACTTCT
GCTGCCGGTGACGCGCGCTCCGCTGCCCCCTGCGCCAGGCGTTACGCTAT
GCCGCAACATGTCTAGTTTCGCCTGAAAACAGCAGCGCTGGGTTATATGT
CATTCCTATAGCGGCTGACCTCTGCTTCCGGCAACGCGCGCTCCGCTGCC
CCCTGCGCCAGGCGCTACGCGCGGCGCGCACGCGGCGCAGCGCGGCTGCT
GCAGCAGACGTGGCGCGCGTGGCGGCGCTGCGCGCAGGCGCACCTGCAGG
GGCTGCGGCTGCTGTGGGAGCGCTACCTGCCGTCGCCGCCGGACGAAGGT
GCGCCATAACGAGGAAAAGCTGCCGGCATACAGAGCACAGTTCGCGCGGC
GTTGACGCATAACGCGGCCTGTTCTCCGTGCAGTAGGCACCTCGTTAGTA
GTTTGCCTGCTTGTGCCAGTGAGGTGGGAGCGCTACCTGCCGTGGCCGCT
GGACGAAGGTGCAAGAGAAACAGTGTTGGGACATACATGATCATATGATG
CATTCCTGCACTAGTAGTGTTGGAGTATCACACACTGTTTAGCATCTTTG
CTGTTAGTACTTCTCTGCGCGAGCGGTACCTCTCATTGCCGCCGGACGAA
GGTGCGCCAGAAGAGTGTTGGAGTATGATACATTCCTGCGCTAGTAGTGT
TGGAGTGTCAACGGCTGTATCATGCATTGCTGAGCATCTTTGCTGCTAGT
GGCTGCTCCTGGAAGTTTCTGCCACATTCTGGCAAGTTCTGAGAAGGTGA
TGCCATGCCAATGCCAGGCCCTCCGCCCAAGTTTCTGCAAGCAGTGATCA
CTTTTCGGTGGGAGCGCTACCTGCCGTCGCCGCCGGACGAAGGTGCGAGA
AGAGGGACTGTTGAGGTTCAGCAACTTCTAGCTCAGCGCGCGCAGCGTTG
CCGCGCGACTCTGTCAGCGCGCTGTGTGGTGGATACCTCGCTAGTATTTT
ATATGCTTCTACCGGCTTAGGGACCGATGGCCGCGCGAGTGCTCCGCTGA
TGGCACCCTGCAGTGCCGCCACGACAACGCTGCGGACCTCCATCAAAGCG
TGTGTGTCCGGCACATTGAGGTATGTGAAGCACATCTGCAAGGCCGGGTA
AGGGTAAGAGTGATGATTAGGGTTTGATTTAGCAGCGTATGCGCCGCACC
CCAAACCCAGTGCCCTAGGCGCTCCTATGTGCTGCGCCTTAAAGTTAGGG
TTAGGGTTAGGGTTAGGGTACCCAGTGCCCCAAGAGCAGCAGCGAGCCTT
CTGGAGGCTTCTGGACACTCTGACTCGTGCACCCCTCAGAATTCCGCCCC
TCCCCCCGTCCCCCGCGCTGAATGCTGCGCAGCCGACGGGTTCCGGATTC
TCTGACGTCGTGCCCCCATCACGGTGCCCCCCCTCCCCCCCCCCACCTGT
CCCCCCCGCTGAACGCTGCGCAGCCAAAAATTTCCAGATTCTCTGACCTC
ATATTTCGGATTCTCTGACCTCGTGCCCCCCTCAGTGCCCCCCCCATGCC
CCCCGCTGAATGCTGCGCAGACAAAAGCTTCCGGACTCTCTGACTCATGC
CCCCCTCACAGCCCCCCCCCCCTCCCCTCCCCCACTGAACGATGAAGGCT
TCCCGACTCTCTGACTCGTGTCCCCCTCACAGCATCGCCCCCCCCCCCCC
CCCGCCCCCCCCCCCGCTGAATTCTGCGCGCAGACGACGCCGACGTCGCG
CCGGAGGTGCGCGCGGCGCTGCTGCTGGAGTGGGCGCGGCGCGCGCGGCG
CGAGCACGTGGACGCCGTGCGGCTGCACCAGCAGCACGCGCGCACGCATG
CGCCGCATCGCGCCCGCGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGC
GGCGGCAAATGCAGCGGCTGGGCCGGCGCGGCGGCGGCGGCCGCCGCTGC
GGCGGCGCGGCGCGGCGGCAAGGTCAGTACACATCTTGACCCACAGCACA
TTGTAACTCCTGTGTTGTCGGATAAGTCGTGATCGGAGCAAGATGCAGTG
CGTGTGCTGGAGTGGCGGCAGCGGAGGAGCTGGCGGTGACGGCGGCGGTG
GAAGCGGCGGTGAGAGCGGCAGCAGCGCGTAGAGGTGAGGTCCATGTGCG
GTGCTTGCAGCGGCGCGTGTGGCCGTCCTTGCGAGCACACGCAGTTTGAT
GCAGGGGCGCGATGCAGCGCTCAGCTGCATCTACACCGCGACCCTGCGCG
CGACGCGCCCCGACTGAGCGCGGCGCGCGCGGCGCTGCTGCGGTGCGTTG
CGCGTGGACGCGCCAGCGCTCGTCCCCCAAGGCAACCGCCAAGGCTCACG
CTCACGGTTCTCCACAAGCACGTCTACAATGATTTGGCTCGTTGACTGAG
GTCACCGGCGTTGGGTATGTAGCTGTAATTTGAAGCGCCCCCTGCTGGAG
CGTGGGGGCTGTGGGGTGAGCTCTCCTTGTGTTTTGCATGAGCGCTTAGA
GCCCGCAGCAGGTGATGCCTGCAGCACGGCGGACCCTGGTGCGCGTTGGT
GCTTGCTGCAGCGGCGTGTTGCTGCTTTGCGAGGTCTGCCAGATGTGCAA
TGAGCGGTGTGCGAGTGGAGTGCTGGAGGATAGGGCGTTTCTCAGAAAGT
ACTTCCCTTGTAGGTTGCTGCAGACCGCAACGGCAGACGAACGCACGCCG
CCTGCACATGACATCGCATAGCTATGCTGTCTCAAAGCGTCACAAACAGG
CACAGGTCATACCCGGCCGTCGTTTCAGTCAAATGACAGGGGTGCGCCTC
GGTCACGCATCTCGCGCATAAGCGCTTGAGCTGCATTGACATACCCTCGT
CGCCTCCATCTGCCCGCTGCCCCCCCCCCCCCCTTAATCGCACCAAAGCA
CGCAAGCCGCGAAGCCAGTGCGGCGCAGACGGCGCGGCTGTACAAAGCGC
TGAGCCATGCGCGCGCCGCCGCGCCGCCGCCGCAGCCCGCCACGCTCGCA
TCCCGGGCGCCCACGCAGCAATTGCCGCAGCAGCAGCAGCAGCAGCGGTC
ATCGGCAGCAGCATCAGTGGCGGCAGCAGCGGCGGCGGCGGCTGCAGTTC
AGCGCTCGTCGTACACGCGCGAGCTGCGGCCGCAGCAGCAGCGGCCGTCG
CACGGGGGGCAGCGCGCCGCGAGACAGCGCGTCAGCGGCGCGACGTCGCC
GCCGCCGCCGCCGCGCCTGCGAAGGTACGCACGCGGCTCGCAACGAGCAT
GGCTTGCTGCTGCTAGCGCTGCACACGCAGATCGTGGCCTTGCTCATTTG
ACTATCAGCAGCACAGCTTGGCCCCTGATCGGCGGTACATAGCAAGGGTA
GGTATGAGTGAGCAAACAGCACGTGTGGTTTGCTGCTGCTCGCGCTGCGC
ACGCAGCTCGTGGCCTTGCTATTCGACAGTCACCAGCGCAGGTCCGCCCC
TCACATCAGCGGCAGCGAGGCTCTCCAGCAAGTGACAAGTAAGCATGCCA
TGCTCATTTGACCAGCTCAGGTCCACCCCTCACGTCAAACGCAGCGAGGC
TCTCAACTCAAGCAAGTGAGCAACAAGTGAGCAACTCCGCGATGCTGCTC
GCATCACGTGCGCAGGTGGTTCACGCCGGCAGACGCAGCGGAGCTGCACG
CGCGCGGCGTGCACCTGACGGCGGCGCGCCTTGCTGCGCCGCCGCGGCCG
CGCTACCGCACCAGCGTCCAGTCGTAA

Coding sequence (CDS) from alignment at Contig_89:152569..159545-

>mRNA_12790 ID=mRNA_12790|Name=jgi.p|Trimin1|351387|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1878bp|location=Sequence derived from alignment at Contig_89:152569..159545- (Tribonema minus UTEX_B_3156 )
ATGGCAGCTCCCGCACGGGCCCTGACGTGCGCGTACTACTCGTGGTCACT
GCGCAAGGCGCCGTTGGCGCAGGAGGCGTCGGCGGTAGCTGGTGTGCCCG
CGGCGGTGATGCAGCAGCGCGTGCAACAAGCAGCGCGCCACGGCCCCAGC
AAGAGCCTGACCGCCATCGCCCCGCAGCTGCATGAGATCTCCTCGCAGCG
CTTCATCTGCGCAGCAAGCGGCGCGCGGCGGAGGCAGCGCGCGCGCGCGA
CTTTGAGCGCGAGAACCGCCGTGCCCAAGCGGCGCGCGGCGGCGGCGCAG
CGCGCGCGCGACTTCGAGCGCGAGAACCGCCGCGCCGTGGCGGTGGCGCC
GTGCTGCGCGCAGCGGCTGCGCGCGGCGCGGCGCGCGGCGACGGCGAACG
GCGGCCGCGGGCGCGCTCTCGCCGTCCTGTGTGCGCGGGAGCGCCTCGTC
AACAGCGAGTTCGCGCGCGCGTCGCAGAAGTCGGAAGTGGCGGCTGCGCG
ACGCCGCGCCCCCCTGTCGCTGCTAGCGGAGGCGCGCGCGTCAGATCAGC
GCGAGCGATTCATCTCACGCGACGTGCCTGCGGCGGCTGCGCGACGCCGC
GCTCTGCGCCTCCACGCAGACCCCAACCCGAACCCTAACCCCCATGCCTC
ATCGTCGACCTACGCGGCGCGCCTGCGGCGCCTGCGCGACGCCGCGCTGT
GCGCGCTCGTGACGGAGCGCGCGTGGCGCGCCGCGCGCGTCGACGCGCGC
GCCTGGCGCGCCTTCGCCGCCCACGCGCGCTTCGCTGAGCCGCTGGTGAC
GGCGCTGAGCGCTGCGCGCGCAGCACGCGCGTGCGCAAGACTGAACTTCC
TCGCGCGCGTGGTGACCAAGCGCTACGCGCGGCGCGCACGCGGCGCAGCG
CGGCTGCTGCAGCAGACGTGGCGCGCGTGGCGGCGCTGCGCGCAGGCGCA
CCTGCAGGGGCTGCGGCTGCTGTGGGAGCGCTACCTGCCGTCGCCGCCGG
ACGAAGGCCCTCCGCCCAAGTTTCTGCAAGCAGTGATCACTTTTCGGTGG
GAGCGCTACCTGCCGTCGCCGCCGGACGAAGACGACGCCGACGTCGCGCC
GGAGGTGCGCGCGGCGCTGCTGCTGGAGTGGGCGCGGCGCGCGCGGCGCG
AGCACGTGGACGCCGTGCGGCTGCACCAGCAGCACGCGCGCACGCATGCG
CCGCATCGCGCCCGCGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGG
CGGCAAATGCAGCGGCTGGGCCGGCGCGGCGGCGGCGGCCGCCGCTGCGG
CGGCGCGGCGCGGCGGCAAGGAGCTGGCGGTGACGGCGGCGGTGGAAGCG
GCGCACACGCAGTTTGATGCAGGGGCGCGATGCAGCGCTCAGCTGCATCT
ACACCGCGACCCTGCGCGCGACGCGCCCCGACTGAGCGCGGCGCGCGCGG
CGCTGCTGCGTGCGGCGCAGACGGCGCGGCTGTACAAAGCGCTGAGCCAT
GCGCGCGCCGCCGCGCCGCCGCCGCAGCCCGCCACGCTCGCATCCCGGGC
GCCCACGCAGCAATTGCCGCAGCAGCAGCAGCAGCAGCGGTCATCGGCAG
CAGCATCAGTGGCGGCAGCAGCGGCGGCGGCGGCTGCAGTTCAGCGCTCG
TCGTACACGCGCGAGCTGCGGCCGCAGCAGCAGCGGCCGTCGCACGGGGG
GCAGCGCGCCGCGAGACAGCGCGTCAGCGGCGCGACGTCGCCGCCGCCGC
CGCCGCGCCTGCGAAGGTGGTTCACGCCGGCAGACGCAGCGGAGCTGCAC
GCGCGCGGCGTGCACCTGACGGCGGCGCGCCTTGCTGCGCCGCCGCGGCC
GCGCTACCGCACCAGCGTCCAGTCGTAA