mRNA_12711 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|351988 vs. uniprot
Match: A0A835ZHF3_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHF3_9STRA) HSP 1 Score: 597 bits (1538), Expect = 3.980e-215 Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 3
Query: 12 MLAGYLAKIVIAHCLVGAVSDAAAFSFSANVSGFYLCCLGGQHCPALKNLKHHTMVSDAELARRSLKNWGELLAAVGRYAVGPHAELRRPDALGSRIDSAGDSPWFNAAVVPVGATPPQADDASLPYCLWTADAAAGAAGRSENAAIATPLMGLDLRDASLKLDDSSASADEEFQIGEPPLETVGDINGRAYGQTGAAFAALVRGLAANGRVRTYGVRDAATGGYVCVAMALSVDDDVGVHYVATEACHRRAGLATRVVTALLRDARARGASTATLQATPDGASVYERIGFRRVGTMHAFVRGGGAASA 938
MLAGYLAKIVIAHCLVGAVSDAAAFSFSANVSGFYLCCLGGQHCPALKNLKHHTMVSDAELARRSLKNWGELLAAVGRYAVGPHAELRRPDALGSRIDSAGDSPWFNAAVVPVGATPPQADDASLPYCLWTADAAAGAAGRSENAAIATPLMGLDLRDASLKLDDSSASADEEFQIGEPPLETVGDINGRAYGQTGAAFAALVRGLAANGRVRTYGVRDAATGGYVCVAMALSVDDDVGVHYVATEACHRRAGLATRVVTALLRDARARGASTATLQATPDGASVYERIGFRRVGTMHAFVRGGGAASA
Sbjct: 1 MLAGYLAKIVIAHCLVGAVSDAAAFSFSANVSGFYLCCLGGQHCPALKNLKHHTMVSDAELARRSLKNWGELLAAVGRYAVGPHAELRRPDALGSRIDSAGDSPWFNAAVVPVGATPPQADDASLPYCLWTADAAAGAAGRSENAAIATPLMGLDLRDASLKLDDSSASADEEFQIGEPPLETVGDINGRAYGQTGAAFAALVRGLAANGRVRTYGVRDAATGGYVCVAMALSVDDDVGVHYVATEACHRRAGLATRVVTALLRDARARGASTATLQATPDGASVYERIGFRRVGTMHAFVRGGGAASA 309
BLAST of jgi.p|Trimin1|351988 vs. uniprot
Match: U5QCS9_9CYAN (Acetyltransferase n=1 Tax=Gloeobacter kilaueensis JS1 TaxID=1183438 RepID=U5QCS9_9CYAN) HSP 1 Score: 216 bits (551), Expect = 7.820e-66 Identity = 123/249 (49.40%), Postives = 171/249 (68.67%), Query Frame = 3
Query: 174 MVSDAELARRSLKNWGELLAAVGRYAVGPHAELRRPDALGSRIDSAGDSPWFNAAVVPVGATPPQADDASLPYCLWT-ADAAAGAAGRSENAAIATPLMGLDLRDASLKLDDSSASADEEFQIGEPPLETVGDINGRAYGQTGAAFAALVRGLAANGRVRTYGVRDAATGGYVCVAMALSVDDDVGVHYVATEACHRRAGLATRVVTALLRDARARGASTATLQATPDGASVYERIGFRRVGTMHAFVR 917
++ D ELARRS+ +GE++AA+G + +GP AE+RRPDA+G+RID+A D+PWF+ AVVP+G PP D+ LP+CLWT ADAA G R E A IA P +G+ L D +L + ++ + PPL +G IN RAYGQ F+ LV G + R+RT+G+R G +V VA+ ++ DD+ + YVATEA +RR GLA+R++ A++ AR G +ATLQA+PDG SVYERIGFRRV T+ A++R
Sbjct: 26 VIDDPELARRSIYGFGEMVAALGYWGIGPEAEVRRPDAVGARIDAAADNPWFDGAVVPLGKVPPT-DEPRLPHCLWTVADAAPG---RVEKAEIAMPCLGISLYDPTLNFEGGASLVEA------PPLAELGRINERAYGQQSGLFSQLV-GALQDERIRTHGLR--VDGVFVSVALTFTLGDDLSIQYVATEAKYRRRGLASRLLLAVIAAARDEGMGSATLQASPDGLSVYERIGFRRVATLRAYLR 261
BLAST of jgi.p|Trimin1|351988 vs. uniprot
Match: UPI0019A5C2F9 (GNAT family N-acetyltransferase n=1 Tax=Bryobacteraceae bacterium TaxID=2212468 RepID=UPI0019A5C2F9) HSP 1 Score: 215 bits (548), Expect = 9.810e-66 Identity = 122/249 (49.00%), Postives = 168/249 (67.47%), Query Frame = 3
Query: 171 TMVSDAELARRSLKNWGELLAAVGRYAVGPHAELRRPDALGSRIDSAGDSPWFNAAVVPVGATPPQADDASLPYCLWTADAAAGAAGRSENAAIATPLMGLDLRDASLKLDDSSASADEEFQIGEPPLETVGDINGRAYGQTGAAFAALVRGLAANGRVRTYGVRDAATGGYVCVAMALSVDDDVGVHYVATEACHRRAGLATRVVTALLRDARARGASTATLQATPDGASVYERIGFRRVGTMHAFVR 917
T ++DAELARRS+ +GE+LAA+GR+ G AE+R P+ALG+RID+A + WF+A VVP A PP DD LPYC+W+ A +GR ENA IATP M + L D + LD + + + P L +G+IN RAYG F +LV+ + + RVRTYG+RD + +VCVA+ L+V DDVG+HYVATEA HRR GLA+R++ +L A++ G +ATL A+PDG S+Y +GFR+V T+ +VR
Sbjct: 3 TAMNDAELARRSILGFGEMLAALGRWGAGTGAEVRWPNALGARIDAAAGNHWFDAVVVPPDAVPPD-DDPRLPYCVWSV--AGAVSGRIENAGIATPCMAMTLEDPAPGLDADAPNFER------PTLTVLGEINERAYGDPTGIFTSLVQEIR-DQRVRTYGLRDGSV--FVCVALTLTVGDDVGIHYVATEASHRRRGLASRLLLDMLAAAKSNGMRSATLLASPDGLSIYRGLGFRQVATLRGYVR 239
BLAST of jgi.p|Trimin1|351988 vs. uniprot
Match: UPI001A93E71D (GNAT family N-acetyltransferase n=1 Tax=Fibrella sp. HMF5036 TaxID=2817059 RepID=UPI001A93E71D) HSP 1 Score: 211 bits (537), Expect = 5.910e-64 Identity = 129/249 (51.81%), Postives = 170/249 (68.27%), Query Frame = 3
Query: 177 VSDAELARRSLKNWGELLAAVGRYAVGPHAELRRPDALGSRIDSAGDSPWFNAAVVPVGATPPQADDASLPYCLWT-ADAAAGAAGRSENAAIATPLMGLDLRD-ASLKLDDSSASADEEFQIGEPPLETVGDINGRAYGQTGAAFAALVRGLAANGRVRTYGVRDAATGGYVCVAMALSVDDDVGVHYVATEACHRRAGLATRVVTALLRDARARGASTATLQATPDGASVYERIGFRRVGTMHAFVR 917
+ DAELARRS+ +GE++AA+GR GP AE+R P+ALG+RI A D+PWF+AAVVPVG PP ADD LP CLWT ADA G R E +IATP MG+ L D A L L + + + D P L +GD+N RAYG+TG F LV L + R+R YG++D G +VCVA+ L+V DD+ +HYVATEA +RR GLA+++V +LL AR G TATLQA+ +G V+ER+GFR+V T+ ++R
Sbjct: 13 IDDAELARRSVIGFGEVVAALGRGYTGPEAEVRWPNALGARIGVAADNPWFDAAVVPVGELPP-ADDILLPGCLWTLADAVPG---RLEEPSIATPCMGVMLDDPALLALGNGAQTVDT------PSLRLLGDLNERAYGETGG-FTPLVSALQ-DERIRAYGLKD--NGSFVCVALTLTVGDDLSIHYVATEADYRRRGLASQLVLSLLAKARGEGLKTATLQASEEGLPVWERLGFRQVATLRGYLR 247
BLAST of jgi.p|Trimin1|351988 vs. uniprot
Match: A0A6J4MAT5_9BACT (N-acetyltransferase domain-containing protein n=1 Tax=uncultured Gemmatimonadetes bacterium TaxID=203437 RepID=A0A6J4MAT5_9BACT) HSP 1 Score: 209 bits (532), Expect = 3.450e-63 Identity = 129/248 (52.02%), Postives = 164/248 (66.13%), Query Frame = 3
Query: 177 VSDAELARRSLKNWGELLAAVGRYAVGPHAELRRPDALGSRIDSAGDSPWFNAAVVPVGATPPQADDASLPYCLWT-ADAAAGAAGRSENAAIATPLMGLDLRDASLKLDDSSASADEEFQIGEPPLETVGDINGRAYGQTGAAFAALVRGLAANGRVRTYGVRDAATGGYVCVAMALSVDDDVGVHYVATEACHRRAGLATRVVTALLRDARARGASTATLQATPDGASVYERIGFRRVGTMHAFVR 917
+ D ELARRSL +GE +A +G P A LRRP A+G+RID+A D+PWF+A VVP+GA PP ADD LP C+WT ADA G R E+ AIATP MG+ L D + +A E PL +G++N RAYGQ G F LVR L + RVR+YG+RD G +VCVA LS+ DD+G+++VATE HRR GLA+ ++ ALL DAR G TATLQA+ DG VYE++GFRRVG M ++R
Sbjct: 13 IRDEELARRSLLGFGEFIALMGEGGGSPGAVLRRPGAVGARIDTAADNPWFDAVVVPLGADPP-ADDRLLPLCVWTMADAVPG---RVEDPAIATPCMGMSLHDLA-----PGGTAHVE----PAPLAVLGEMNERAYGQAGV-FGPLVRALR-DERVRSYGLRDG--GEFVCVAATLSMGDDLGIYFVATEQTHRRRGLASGLLRALLADARDAGMRTATLQASADGLGVYEKLGFRRVGDMRGYLR 243
BLAST of jgi.p|Trimin1|351988 vs. uniprot
Match: A0A7W1TR42_9CHLR (GNAT family N-acetyltransferase n=1 Tax=Herpetosiphonaceae bacterium TaxID=2720503 RepID=A0A7W1TR42_9CHLR) HSP 1 Score: 200 bits (509), Expect = 7.080e-60 Identity = 120/248 (48.39%), Postives = 164/248 (66.13%), Query Frame = 3
Query: 174 MVSDAELARRSLKNWGELLAAVGRYAVGPHAELRRPDALGSRIDSAGDSPWFNAAVVPVGATPPQADDASLPYCLWTADAAAGAAGRSENAAIATPLMGLDLRDASLKLDDSSASADEEFQIGEPPLETVGDINGRAYGQTGAAFAALVRGLAANGRVRTYGVRDAATGGYVCVAMALSVDDDVGVHYVATEACHRRAGLATRVVTALLRDARARGASTATLQATPDGASVYERIGFRRVGTMHAFVR 917
M+ DAELARRS+ +GE++AA+GR++ GP AE+R P+ALG+R+D+A D+ WF+AAVVP A PP DD LP+CLWT A GR E IATP MGL L D +L+LD + D E L +GD+N RAYG+TG F LV L + RV T+G+RD G +V +V DD+ + YVATE +RR GLA+R++ A++ AR +G +ATLQA+ +G +VYE +GFRRV + A++R
Sbjct: 1 MLDDAELARRSILGFGEMVAALGRWSAGPEAEVRWPNALGARMDAAADNHWFDAAVVPFDAVPP-VDDPRLPHCLWTV--AGAVPGRVEEVGIATPCMGLALDDPALELD--GGAPDVEVSS----LAVLGDVNERAYGETG--FTPLVSTLR-DDRVHTHGLRD--HGAFVSATQTKAVGDDLSIQYVATEVGYRRRGLASRLLLAVMAAARDQGMRSATLQASAEGLAVYEHLGFRRVAMLRAYLR 234
BLAST of jgi.p|Trimin1|351988 vs. uniprot
Match: UPI000403EBEB (GNAT family N-acetyltransferase n=1 Tax=Conexibacter woesei TaxID=191495 RepID=UPI000403EBEB) HSP 1 Score: 180 bits (456), Expect = 4.880e-52 Identity = 115/247 (46.56%), Postives = 151/247 (61.13%), Query Frame = 3
Query: 177 VSDAELARRSLKNWGELLAAVGRYAVGPHAELRRPDALGSRIDSAGDSPWFNAAVVPVGATPPQADDASLPYCLWTADAAAGAAGRSENAAIATPLMGLDLRDASLKLDDSSASADEEFQIGEPPLETVGDINGRAYGQTGAAFAALVRGLAANGRVRTYGVRDAATGGYVCVAMALSVDDDVGVHYVATEACHRRAGLATRVVTALLRDARARGASTATLQATPDGASVYERIGFRRVGTMHAFVR 917
+ DAELARRS+ + E LAA+ G HA +RR + +G+R+ + D+PW +AA VP G PPQADDA LP+CLW A GR E IA P MG+ L + + + + P L+ VG +N RAYGQ A LVR L + RV +G R G VCVA+ L + DDV + YVATE HR GLA+R++T ++ +ARA GA+TATLQA+PDG VYER+GFR V T+ AF+R
Sbjct: 1 MDDAELARRSILGFCETLAAL----AGEHA-VRRENVIGARVPDS-DNPWLDAAAVPHGFAPPQADDAGLPHCLWAE--AEAIPGRYERGHIAMPCMGIALNGGA------ALPEGDPLDLVTPTLDVVGAVNDRAYGQDDA-LGPLVRALQ-DDRVSAHGAR--VDGETVCVALTLRIGDDVSIQYVATERDHRGQGLASRLMTNIMNNARATGATTATLQASPDGRPVYERLGFRTVATLRAFIR 229
BLAST of jgi.p|Trimin1|351988 vs. uniprot
Match: UPI00041BEDC9 (GNAT family N-acetyltransferase n=1 Tax=Solirubrobacter soli TaxID=363832 RepID=UPI00041BEDC9) HSP 1 Score: 155 bits (393), Expect = 1.270e-42 Identity = 107/242 (44.21%), Postives = 136/242 (56.20%), Query Frame = 3
Query: 189 ELARRSLKNWGELLAAVGRYAVGPHAELRRPDALGSRIDSAGDSPWFNAAVVPVGATPPQADDASLPYCLWTADAAAGAAGRSENAAIATPLMGLDLRDASLKLDDSSASADEEFQIGEPPLETVGDINGRAYGQTGAAFAALVRGLAANGRVRTYGVRDAATGGYVCVAMALSVDDDVGVHYVATEACHRRAGLATRVVTALLRDARARGASTATLQATPDGASVYERIGFRRVGTMHAFV 914
E ARRS+ + E LA +GR VG +E+R P +G+ + A D+ W +AAV GA D A P+C+W+ D G E IA P M LDL E I PPL+ G +N RAYGQ A L+ + + RVRT+GVR G + CV +AL +DDDV V YVATE +RR GLA VV A + +ARA GA TATLQA+PDG VYER+GFR V T+ A +
Sbjct: 3 EDARRSIDGFAETLACLGRTGVGGASEIRAPGLVGAHVPWARDNHWIDAAVARPGA-----DLADAPHCVWSTD------GSGE---IAMPCMALDL---------DGWEPPREGPIDTPPLDVAGAVNDRAYGQIDR-LAPLIAAID-DPRVRTHGVR--IDGEWACVTLALLLDDDVSVQYVATEPAYRRRGLAAWVVGAAIAEARADGARTATLQASPDGFGVYERLGFRTVTTLFASI 217
BLAST of jgi.p|Trimin1|351988 vs. uniprot
Match: A0A660L0A2_9ACTN (Acetyltransferase (GNAT) family protein n=1 Tax=Solirubrobacter pauli TaxID=166793 RepID=A0A660L0A2_9ACTN) HSP 1 Score: 149 bits (376), Expect = 3.720e-40 Identity = 105/242 (43.39%), Postives = 137/242 (56.61%), Query Frame = 3
Query: 189 ELARRSLKNWGELLAAVGRYAVGPHAELRRPDALGSRIDSAGDSPWFNAAVVPVGATPPQADDASLPYCLWTADAAAGAAGRSENAAIATPLMGLDLRDASLKLDDSSASADEEFQIGEPPLETVGDINGRAYGQTGAAFAALVRGLAANGRVRTYGVRDAATGGYVCVAMALSVDDDVGVHYVATEACHRRAGLATRVVTALLRDARARGASTATLQATPDGASVYERIGFRRVGTMHAFV 914
+LA+ S+ + E LA +GR V AE R P +G+ + A D+ W +AAV GA + P+C+W+ A AGR+E A +A P MGL L + A + P L+ +G +N RAYGQ A L+ G A+ R+RT+G+R G + CVA+ L VDDDV V YVATEA RR GLA +VV L AR GA TATLQA+PDG VYER+GFR V T+ A V
Sbjct: 3 DLAQCSIDGFAETLACLGRTGVRGAAEHRTPGVVGAHVPWARDNHWIDAAVAAPGA-----ELVEPPHCVWST---AVPAGRTELAELAMPCMGLVL---------AGWEAPAHAPLDAPALDVLGTLNDRAYGQRDR-LAPLI-GALADPRLRTHGLR--VDGEWACVALTLRVDDDVSVQYVATEARFRRRGLAAQVVAGALVQAREAGARTATLQASPDGRGVYERLGFRTVATLVATV 223
BLAST of jgi.p|Trimin1|351988 vs. uniprot
Match: UPI001EEF0763 (GNAT family N-acetyltransferase n=1 Tax=Solirubrobacter sp. CPCC 204708 TaxID=2282478 RepID=UPI001EEF0763) HSP 1 Score: 147 bits (371), Expect = 2.000e-39 Identity = 106/242 (43.80%), Postives = 136/242 (56.20%), Query Frame = 3
Query: 189 ELARRSLKNWGELLAAVGRYAVGPHAELRRPDALGSRIDSAGDSPWFNAAVVPVGATPPQADDASLPYCLWTADAAAGAAGRSENAAIATPLMGLDLRDASLKLDDSSASADEEFQIGEPPLETVGDINGRAYGQTGAAFAALVRGLAANGRVRTYGVRDAATGGYVCVAMALSVDDDVGVHYVATEACHRRAGLATRVVTALLRDARARGASTATLQATPDGASVYERIGFRRVGTMHAFV 914
ELA+RS+ + E LA +GR VG E+R A+G+R+ A D+ W +AAV G P+CLW+ A R E AIA P MGL LD+ A + P L+ VG++N RAYGQ A L+ G + RVRT+G+R G + CVA+ + + DDV V YVATEA RR GLA +V+ L ARA GA TATLQA+PDG VYER+GFR V T+ A V
Sbjct: 2 ELAQRSIDGFAETLACLGRTGVGGAREVRAAGAVGARVPWAEDNHWIDAAVGGPGVVL-----VDPPHCLWSTVAPPD---RQELEAIAMPCMGL-------VLDEWQVPAGAPLET--PALDVVGELNDRAYGQQDR-LAPLI-GALDDPRVRTHGLR--VDGEWACVALTVRLADDVSVQYVATEAAFRRRGLAAQVLAGALARARADGARTATLQASPDGRGVYERLGFRTVATLTASV 222 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351988 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12711 ID=mRNA_12711|Name=jgi.p|Trimin1|351988|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=941bp|location=Sequence derived from alignment at Contig_105:40108..41480+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GCAGCCACTCGATGCTCGCAGGATACTTGGCTAAGATCGTTATTGCCCACback to top protein sequence of jgi.p|Trimin1|351988 >Trimin1|351988|estExt_Genemark1.C_Ctg_1050008 ID=Trimin1|351988|estExt_Genemark1.C_Ctg_1050008|Name=jgi.p|Trimin1|351988|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=310bp MLAGYLAKIVIAHCLVGAVSDAAAFSFSANVSGFYLCCLGGQHCPALKNLback to top mRNA from alignment at Contig_105:40108..41480+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_12711 ID=mRNA_12711|Name=jgi.p|Trimin1|351988|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1373bp|location=Sequence derived from alignment at Contig_105:40108..41480+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_105:40108..41480+ >mRNA_12711 ID=mRNA_12711|Name=jgi.p|Trimin1|351988|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=930bp|location=Sequence derived from alignment at Contig_105:40108..41480+ (Tribonema minus UTEX_B_3156 )back to top |