mRNA_12711 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|351988
Unique NamemRNA_12711
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|351988 vs. uniprot
Match: A0A835ZHF3_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHF3_9STRA)

HSP 1 Score: 597 bits (1538), Expect = 3.980e-215
Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 3
Query:   12 MLAGYLAKIVIAHCLVGAVSDAAAFSFSANVSGFYLCCLGGQHCPALKNLKHHTMVSDAELARRSLKNWGELLAAVGRYAVGPHAELRRPDALGSRIDSAGDSPWFNAAVVPVGATPPQADDASLPYCLWTADAAAGAAGRSENAAIATPLMGLDLRDASLKLDDSSASADEEFQIGEPPLETVGDINGRAYGQTGAAFAALVRGLAANGRVRTYGVRDAATGGYVCVAMALSVDDDVGVHYVATEACHRRAGLATRVVTALLRDARARGASTATLQATPDGASVYERIGFRRVGTMHAFVRGGGAASA 938
            MLAGYLAKIVIAHCLVGAVSDAAAFSFSANVSGFYLCCLGGQHCPALKNLKHHTMVSDAELARRSLKNWGELLAAVGRYAVGPHAELRRPDALGSRIDSAGDSPWFNAAVVPVGATPPQADDASLPYCLWTADAAAGAAGRSENAAIATPLMGLDLRDASLKLDDSSASADEEFQIGEPPLETVGDINGRAYGQTGAAFAALVRGLAANGRVRTYGVRDAATGGYVCVAMALSVDDDVGVHYVATEACHRRAGLATRVVTALLRDARARGASTATLQATPDGASVYERIGFRRVGTMHAFVRGGGAASA
Sbjct:    1 MLAGYLAKIVIAHCLVGAVSDAAAFSFSANVSGFYLCCLGGQHCPALKNLKHHTMVSDAELARRSLKNWGELLAAVGRYAVGPHAELRRPDALGSRIDSAGDSPWFNAAVVPVGATPPQADDASLPYCLWTADAAAGAAGRSENAAIATPLMGLDLRDASLKLDDSSASADEEFQIGEPPLETVGDINGRAYGQTGAAFAALVRGLAANGRVRTYGVRDAATGGYVCVAMALSVDDDVGVHYVATEACHRRAGLATRVVTALLRDARARGASTATLQATPDGASVYERIGFRRVGTMHAFVRGGGAASA 309          
BLAST of jgi.p|Trimin1|351988 vs. uniprot
Match: U5QCS9_9CYAN (Acetyltransferase n=1 Tax=Gloeobacter kilaueensis JS1 TaxID=1183438 RepID=U5QCS9_9CYAN)

HSP 1 Score: 216 bits (551), Expect = 7.820e-66
Identity = 123/249 (49.40%), Postives = 171/249 (68.67%), Query Frame = 3
Query:  174 MVSDAELARRSLKNWGELLAAVGRYAVGPHAELRRPDALGSRIDSAGDSPWFNAAVVPVGATPPQADDASLPYCLWT-ADAAAGAAGRSENAAIATPLMGLDLRDASLKLDDSSASADEEFQIGEPPLETVGDINGRAYGQTGAAFAALVRGLAANGRVRTYGVRDAATGGYVCVAMALSVDDDVGVHYVATEACHRRAGLATRVVTALLRDARARGASTATLQATPDGASVYERIGFRRVGTMHAFVR 917
            ++ D ELARRS+  +GE++AA+G + +GP AE+RRPDA+G+RID+A D+PWF+ AVVP+G  PP  D+  LP+CLWT ADAA G   R E A IA P +G+ L D +L  +  ++  +       PPL  +G IN RAYGQ    F+ LV G   + R+RT+G+R    G +V VA+  ++ DD+ + YVATEA +RR GLA+R++ A++  AR  G  +ATLQA+PDG SVYERIGFRRV T+ A++R
Sbjct:   26 VIDDPELARRSIYGFGEMVAALGYWGIGPEAEVRRPDAVGARIDAAADNPWFDGAVVPLGKVPPT-DEPRLPHCLWTVADAAPG---RVEKAEIAMPCLGISLYDPTLNFEGGASLVEA------PPLAELGRINERAYGQQSGLFSQLV-GALQDERIRTHGLR--VDGVFVSVALTFTLGDDLSIQYVATEAKYRRRGLASRLLLAVIAAARDEGMGSATLQASPDGLSVYERIGFRRVATLRAYLR 261          
BLAST of jgi.p|Trimin1|351988 vs. uniprot
Match: UPI0019A5C2F9 (GNAT family N-acetyltransferase n=1 Tax=Bryobacteraceae bacterium TaxID=2212468 RepID=UPI0019A5C2F9)

HSP 1 Score: 215 bits (548), Expect = 9.810e-66
Identity = 122/249 (49.00%), Postives = 168/249 (67.47%), Query Frame = 3
Query:  171 TMVSDAELARRSLKNWGELLAAVGRYAVGPHAELRRPDALGSRIDSAGDSPWFNAAVVPVGATPPQADDASLPYCLWTADAAAGAAGRSENAAIATPLMGLDLRDASLKLDDSSASADEEFQIGEPPLETVGDINGRAYGQTGAAFAALVRGLAANGRVRTYGVRDAATGGYVCVAMALSVDDDVGVHYVATEACHRRAGLATRVVTALLRDARARGASTATLQATPDGASVYERIGFRRVGTMHAFVR 917
            T ++DAELARRS+  +GE+LAA+GR+  G  AE+R P+ALG+RID+A  + WF+A VVP  A PP  DD  LPYC+W+   A   +GR ENA IATP M + L D +  LD  + + +       P L  +G+IN RAYG     F +LV+ +  + RVRTYG+RD +   +VCVA+ L+V DDVG+HYVATEA HRR GLA+R++  +L  A++ G  +ATL A+PDG S+Y  +GFR+V T+  +VR
Sbjct:    3 TAMNDAELARRSILGFGEMLAALGRWGAGTGAEVRWPNALGARIDAAAGNHWFDAVVVPPDAVPPD-DDPRLPYCVWSV--AGAVSGRIENAGIATPCMAMTLEDPAPGLDADAPNFER------PTLTVLGEINERAYGDPTGIFTSLVQEIR-DQRVRTYGLRDGSV--FVCVALTLTVGDDVGIHYVATEASHRRRGLASRLLLDMLAAAKSNGMRSATLLASPDGLSIYRGLGFRQVATLRGYVR 239          
BLAST of jgi.p|Trimin1|351988 vs. uniprot
Match: UPI001A93E71D (GNAT family N-acetyltransferase n=1 Tax=Fibrella sp. HMF5036 TaxID=2817059 RepID=UPI001A93E71D)

HSP 1 Score: 211 bits (537), Expect = 5.910e-64
Identity = 129/249 (51.81%), Postives = 170/249 (68.27%), Query Frame = 3
Query:  177 VSDAELARRSLKNWGELLAAVGRYAVGPHAELRRPDALGSRIDSAGDSPWFNAAVVPVGATPPQADDASLPYCLWT-ADAAAGAAGRSENAAIATPLMGLDLRD-ASLKLDDSSASADEEFQIGEPPLETVGDINGRAYGQTGAAFAALVRGLAANGRVRTYGVRDAATGGYVCVAMALSVDDDVGVHYVATEACHRRAGLATRVVTALLRDARARGASTATLQATPDGASVYERIGFRRVGTMHAFVR 917
            + DAELARRS+  +GE++AA+GR   GP AE+R P+ALG+RI  A D+PWF+AAVVPVG  PP ADD  LP CLWT ADA  G   R E  +IATP MG+ L D A L L + + + D       P L  +GD+N RAYG+TG  F  LV  L  + R+R YG++D   G +VCVA+ L+V DD+ +HYVATEA +RR GLA+++V +LL  AR  G  TATLQA+ +G  V+ER+GFR+V T+  ++R
Sbjct:   13 IDDAELARRSVIGFGEVVAALGRGYTGPEAEVRWPNALGARIGVAADNPWFDAAVVPVGELPP-ADDILLPGCLWTLADAVPG---RLEEPSIATPCMGVMLDDPALLALGNGAQTVDT------PSLRLLGDLNERAYGETGG-FTPLVSALQ-DERIRAYGLKD--NGSFVCVALTLTVGDDLSIHYVATEADYRRRGLASQLVLSLLAKARGEGLKTATLQASEEGLPVWERLGFRQVATLRGYLR 247          
BLAST of jgi.p|Trimin1|351988 vs. uniprot
Match: A0A6J4MAT5_9BACT (N-acetyltransferase domain-containing protein n=1 Tax=uncultured Gemmatimonadetes bacterium TaxID=203437 RepID=A0A6J4MAT5_9BACT)

HSP 1 Score: 209 bits (532), Expect = 3.450e-63
Identity = 129/248 (52.02%), Postives = 164/248 (66.13%), Query Frame = 3
Query:  177 VSDAELARRSLKNWGELLAAVGRYAVGPHAELRRPDALGSRIDSAGDSPWFNAAVVPVGATPPQADDASLPYCLWT-ADAAAGAAGRSENAAIATPLMGLDLRDASLKLDDSSASADEEFQIGEPPLETVGDINGRAYGQTGAAFAALVRGLAANGRVRTYGVRDAATGGYVCVAMALSVDDDVGVHYVATEACHRRAGLATRVVTALLRDARARGASTATLQATPDGASVYERIGFRRVGTMHAFVR 917
            + D ELARRSL  +GE +A +G     P A LRRP A+G+RID+A D+PWF+A VVP+GA PP ADD  LP C+WT ADA  G   R E+ AIATP MG+ L D +        +A  E      PL  +G++N RAYGQ G  F  LVR L  + RVR+YG+RD   G +VCVA  LS+ DD+G+++VATE  HRR GLA+ ++ ALL DAR  G  TATLQA+ DG  VYE++GFRRVG M  ++R
Sbjct:   13 IRDEELARRSLLGFGEFIALMGEGGGSPGAVLRRPGAVGARIDTAADNPWFDAVVVPLGADPP-ADDRLLPLCVWTMADAVPG---RVEDPAIATPCMGMSLHDLA-----PGGTAHVE----PAPLAVLGEMNERAYGQAGV-FGPLVRALR-DERVRSYGLRDG--GEFVCVAATLSMGDDLGIYFVATEQTHRRRGLASGLLRALLADARDAGMRTATLQASADGLGVYEKLGFRRVGDMRGYLR 243          
BLAST of jgi.p|Trimin1|351988 vs. uniprot
Match: A0A7W1TR42_9CHLR (GNAT family N-acetyltransferase n=1 Tax=Herpetosiphonaceae bacterium TaxID=2720503 RepID=A0A7W1TR42_9CHLR)

HSP 1 Score: 200 bits (509), Expect = 7.080e-60
Identity = 120/248 (48.39%), Postives = 164/248 (66.13%), Query Frame = 3
Query:  174 MVSDAELARRSLKNWGELLAAVGRYAVGPHAELRRPDALGSRIDSAGDSPWFNAAVVPVGATPPQADDASLPYCLWTADAAAGAAGRSENAAIATPLMGLDLRDASLKLDDSSASADEEFQIGEPPLETVGDINGRAYGQTGAAFAALVRGLAANGRVRTYGVRDAATGGYVCVAMALSVDDDVGVHYVATEACHRRAGLATRVVTALLRDARARGASTATLQATPDGASVYERIGFRRVGTMHAFVR 917
            M+ DAELARRS+  +GE++AA+GR++ GP AE+R P+ALG+R+D+A D+ WF+AAVVP  A PP  DD  LP+CLWT   A    GR E   IATP MGL L D +L+LD    + D E       L  +GD+N RAYG+TG  F  LV  L  + RV T+G+RD   G +V      +V DD+ + YVATE  +RR GLA+R++ A++  AR +G  +ATLQA+ +G +VYE +GFRRV  + A++R
Sbjct:    1 MLDDAELARRSILGFGEMVAALGRWSAGPEAEVRWPNALGARMDAAADNHWFDAAVVPFDAVPP-VDDPRLPHCLWTV--AGAVPGRVEEVGIATPCMGLALDDPALELD--GGAPDVEVSS----LAVLGDVNERAYGETG--FTPLVSTLR-DDRVHTHGLRD--HGAFVSATQTKAVGDDLSIQYVATEVGYRRRGLASRLLLAVMAAARDQGMRSATLQASAEGLAVYEHLGFRRVAMLRAYLR 234          
BLAST of jgi.p|Trimin1|351988 vs. uniprot
Match: UPI000403EBEB (GNAT family N-acetyltransferase n=1 Tax=Conexibacter woesei TaxID=191495 RepID=UPI000403EBEB)

HSP 1 Score: 180 bits (456), Expect = 4.880e-52
Identity = 115/247 (46.56%), Postives = 151/247 (61.13%), Query Frame = 3
Query:  177 VSDAELARRSLKNWGELLAAVGRYAVGPHAELRRPDALGSRIDSAGDSPWFNAAVVPVGATPPQADDASLPYCLWTADAAAGAAGRSENAAIATPLMGLDLRDASLKLDDSSASADEEFQIGEPPLETVGDINGRAYGQTGAAFAALVRGLAANGRVRTYGVRDAATGGYVCVAMALSVDDDVGVHYVATEACHRRAGLATRVVTALLRDARARGASTATLQATPDGASVYERIGFRRVGTMHAFVR 917
            + DAELARRS+  + E LAA+     G HA +RR + +G+R+  + D+PW +AA VP G  PPQADDA LP+CLW    A    GR E   IA P MG+ L   +      +    +   +  P L+ VG +N RAYGQ  A    LVR L  + RV  +G R    G  VCVA+ L + DDV + YVATE  HR  GLA+R++T ++ +ARA GA+TATLQA+PDG  VYER+GFR V T+ AF+R
Sbjct:    1 MDDAELARRSILGFCETLAAL----AGEHA-VRRENVIGARVPDS-DNPWLDAAAVPHGFAPPQADDAGLPHCLWAE--AEAIPGRYERGHIAMPCMGIALNGGA------ALPEGDPLDLVTPTLDVVGAVNDRAYGQDDA-LGPLVRALQ-DDRVSAHGAR--VDGETVCVALTLRIGDDVSIQYVATERDHRGQGLASRLMTNIMNNARATGATTATLQASPDGRPVYERLGFRTVATLRAFIR 229          
BLAST of jgi.p|Trimin1|351988 vs. uniprot
Match: UPI00041BEDC9 (GNAT family N-acetyltransferase n=1 Tax=Solirubrobacter soli TaxID=363832 RepID=UPI00041BEDC9)

HSP 1 Score: 155 bits (393), Expect = 1.270e-42
Identity = 107/242 (44.21%), Postives = 136/242 (56.20%), Query Frame = 3
Query:  189 ELARRSLKNWGELLAAVGRYAVGPHAELRRPDALGSRIDSAGDSPWFNAAVVPVGATPPQADDASLPYCLWTADAAAGAAGRSENAAIATPLMGLDLRDASLKLDDSSASADEEFQIGEPPLETVGDINGRAYGQTGAAFAALVRGLAANGRVRTYGVRDAATGGYVCVAMALSVDDDVGVHYVATEACHRRAGLATRVVTALLRDARARGASTATLQATPDGASVYERIGFRRVGTMHAFV 914
            E ARRS+  + E LA +GR  VG  +E+R P  +G+ +  A D+ W +AAV   GA     D A  P+C+W+ D      G  E   IA P M LDL                E  I  PPL+  G +N RAYGQ     A L+  +  + RVRT+GVR    G + CV +AL +DDDV V YVATE  +RR GLA  VV A + +ARA GA TATLQA+PDG  VYER+GFR V T+ A +
Sbjct:    3 EDARRSIDGFAETLACLGRTGVGGASEIRAPGLVGAHVPWARDNHWIDAAVARPGA-----DLADAPHCVWSTD------GSGE---IAMPCMALDL---------DGWEPPREGPIDTPPLDVAGAVNDRAYGQIDR-LAPLIAAID-DPRVRTHGVR--IDGEWACVTLALLLDDDVSVQYVATEPAYRRRGLAAWVVGAAIAEARADGARTATLQASPDGFGVYERLGFRTVTTLFASI 217          
BLAST of jgi.p|Trimin1|351988 vs. uniprot
Match: A0A660L0A2_9ACTN (Acetyltransferase (GNAT) family protein n=1 Tax=Solirubrobacter pauli TaxID=166793 RepID=A0A660L0A2_9ACTN)

HSP 1 Score: 149 bits (376), Expect = 3.720e-40
Identity = 105/242 (43.39%), Postives = 137/242 (56.61%), Query Frame = 3
Query:  189 ELARRSLKNWGELLAAVGRYAVGPHAELRRPDALGSRIDSAGDSPWFNAAVVPVGATPPQADDASLPYCLWTADAAAGAAGRSENAAIATPLMGLDLRDASLKLDDSSASADEEFQIGEPPLETVGDINGRAYGQTGAAFAALVRGLAANGRVRTYGVRDAATGGYVCVAMALSVDDDVGVHYVATEACHRRAGLATRVVTALLRDARARGASTATLQATPDGASVYERIGFRRVGTMHAFV 914
            +LA+ S+  + E LA +GR  V   AE R P  +G+ +  A D+ W +AAV   GA     +    P+C+W+    A  AGR+E A +A P MGL L         +   A     +  P L+ +G +N RAYGQ     A L+ G  A+ R+RT+G+R    G + CVA+ L VDDDV V YVATEA  RR GLA +VV   L  AR  GA TATLQA+PDG  VYER+GFR V T+ A V
Sbjct:    3 DLAQCSIDGFAETLACLGRTGVRGAAEHRTPGVVGAHVPWARDNHWIDAAVAAPGA-----ELVEPPHCVWST---AVPAGRTELAELAMPCMGLVL---------AGWEAPAHAPLDAPALDVLGTLNDRAYGQRDR-LAPLI-GALADPRLRTHGLR--VDGEWACVALTLRVDDDVSVQYVATEARFRRRGLAAQVVAGALVQAREAGARTATLQASPDGRGVYERLGFRTVATLVATV 223          
BLAST of jgi.p|Trimin1|351988 vs. uniprot
Match: UPI001EEF0763 (GNAT family N-acetyltransferase n=1 Tax=Solirubrobacter sp. CPCC 204708 TaxID=2282478 RepID=UPI001EEF0763)

HSP 1 Score: 147 bits (371), Expect = 2.000e-39
Identity = 106/242 (43.80%), Postives = 136/242 (56.20%), Query Frame = 3
Query:  189 ELARRSLKNWGELLAAVGRYAVGPHAELRRPDALGSRIDSAGDSPWFNAAVVPVGATPPQADDASLPYCLWTADAAAGAAGRSENAAIATPLMGLDLRDASLKLDDSSASADEEFQIGEPPLETVGDINGRAYGQTGAAFAALVRGLAANGRVRTYGVRDAATGGYVCVAMALSVDDDVGVHYVATEACHRRAGLATRVVTALLRDARARGASTATLQATPDGASVYERIGFRRVGTMHAFV 914
            ELA+RS+  + E LA +GR  VG   E+R   A+G+R+  A D+ W +AAV   G           P+CLW+  A      R E  AIA P MGL        LD+    A    +   P L+ VG++N RAYGQ     A L+ G   + RVRT+G+R    G + CVA+ + + DDV V YVATEA  RR GLA +V+   L  ARA GA TATLQA+PDG  VYER+GFR V T+ A V
Sbjct:    2 ELAQRSIDGFAETLACLGRTGVGGAREVRAAGAVGARVPWAEDNHWIDAAVGGPGVVL-----VDPPHCLWSTVAPPD---RQELEAIAMPCMGL-------VLDEWQVPAGAPLET--PALDVVGELNDRAYGQQDR-LAPLI-GALDDPRVRTHGLR--VDGEWACVALTVRLADDVSVQYVATEAAFRRRGLAAQVLAGALARARADGARTATLQASPDGRGVYERLGFRTVATLTASV 222          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351988 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZHF3_9STRA3.980e-215100.00N-acetyltransferase domain-containing protein n=1 ... [more]
U5QCS9_9CYAN7.820e-6649.40Acetyltransferase n=1 Tax=Gloeobacter kilaueensis ... [more]
UPI0019A5C2F99.810e-6649.00GNAT family N-acetyltransferase n=1 Tax=Bryobacter... [more]
UPI001A93E71D5.910e-6451.81GNAT family N-acetyltransferase n=1 Tax=Fibrella s... [more]
A0A6J4MAT5_9BACT3.450e-6352.02N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7W1TR42_9CHLR7.080e-6048.39GNAT family N-acetyltransferase n=1 Tax=Herpetosip... [more]
UPI000403EBEB4.880e-5246.56GNAT family N-acetyltransferase n=1 Tax=Conexibact... [more]
UPI00041BEDC91.270e-4244.21GNAT family N-acetyltransferase n=1 Tax=Solirubrob... [more]
A0A660L0A2_9ACTN3.720e-4043.39Acetyltransferase (GNAT) family protein n=1 Tax=So... [more]
UPI001EEF07632.000e-3943.80GNAT family N-acetyltransferase n=1 Tax=Solirubrob... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_105contigContig_105:40108..41480 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|351988|estExt_Genemark1.C_Ctg_1050008
Descriptionacetyltransferase
COG categoryK
Max annot lvl2|Bacteria
EggNOG OGsCOG0454@1|root,COG0456@2|Bacteria
Evalue1.16e-66
Seed ortholog1183438.GKIL_0407
Hectar predicted targeting categorysignal peptide
TranscriptId352310
TrackFilteredModels1
ProteinId351988
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351988gene_12711Tribonema minus UTEX_B_3156 geneContig_105 40108..41480 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_12711_1exon_12711_1Tribonema minus UTEX_B_3156 exonContig_105 40108..40254 +
exon_12711_2exon_12711_2Tribonema minus UTEX_B_3156 exonContig_105 40687..41480 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_12711UTR5_12711Tribonema minus UTEX_B_3156 five_prime_UTRContig_105 40108..40118 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_12711CDS_12711Tribonema minus UTEX_B_3156 CDSContig_105 40119..40254 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351988Trimin1|351988|estExt_Genemark1.C_Ctg_1050008Tribonema minus UTEX_B_3156 polypeptideContig_105 40119..41480 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_12711 ID=mRNA_12711|Name=jgi.p|Trimin1|351988|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=941bp|location=Sequence derived from alignment at Contig_105:40108..41480+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCAGCCACTCGATGCTCGCAGGATACTTGGCTAAGATCGTTATTGCCCAC
TGTCTGGTCGGTGCAGTGTCTGATGCAGCAGCTTTCAGCTTCAGTGCCAA
CGTATCAGGGTTCTATCTTTGCTGCCTAGGTGGGCAGCACTGTCCAGCGC
TCAAAAACTTGAAGCATCACACTATGGTCAGCGATGCCGAACTCGCACGC
CGCTCTCTCAAGAACTGGGGCGAACTGCTGGCCGCCGTGGGGCGCTACGC
GGTGGGCCCGCACGCCGAGCTGCGCCGACCCGACGCGCTGGGGTCTCGCA
TCGACTCCGCAGGCGACAGCCCCTGGTTCAACGCGGCGGTGGTACCTGTC
GGCGCCACCCCCCCGCAAGCCGACGACGCCAGTCTGCCGTACTGTCTCTG
GACGGCCGACGCCGCCGCGGGCGCCGCGGGCCGGTCGGAGAACGCCGCCA
TCGCGACGCCGCTCATGGGGCTCGACCTTCGAGACGCGTCGCTGAAGTTG
GACGACAGCAGCGCCTCTGCAGATGAGGAATTTCAAATCGGAGAGCCCCC
CTTGGAGACGGTTGGCGACATTAACGGTCGCGCGTACGGGCAGACCGGCG
CGGCGTTCGCGGCGCTCGTGCGCGGCCTCGCCGCCAACGGCCGCGTACGT
ACCTACGGCGTGCGCGACGCTGCGACCGGCGGCTACGTCTGCGTGGCCAT
GGCGCTGAGCGTTGATGACGACGTCGGCGTCCACTACGTCGCCACCGAGG
CATGCCACCGGCGTGCGGGGCTCGCGACGCGCGTCGTGACGGCGCTGCTG
CGCGACGCGCGCGCGCGCGGCGCGAGCACTGCCACGCTGCAGGCGACGCC
GGACGGCGCGTCCGTGTACGAGCGGATCGGCTTCAGGCGCGTGGGCACCA
TGCACGCGTTCGTGCGCGGCGGCGGCGCGGCGAGCGCGTGA
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protein sequence of jgi.p|Trimin1|351988

>Trimin1|351988|estExt_Genemark1.C_Ctg_1050008 ID=Trimin1|351988|estExt_Genemark1.C_Ctg_1050008|Name=jgi.p|Trimin1|351988|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=310bp
MLAGYLAKIVIAHCLVGAVSDAAAFSFSANVSGFYLCCLGGQHCPALKNL
KHHTMVSDAELARRSLKNWGELLAAVGRYAVGPHAELRRPDALGSRIDSA
GDSPWFNAAVVPVGATPPQADDASLPYCLWTADAAAGAAGRSENAAIATP
LMGLDLRDASLKLDDSSASADEEFQIGEPPLETVGDINGRAYGQTGAAFA
ALVRGLAANGRVRTYGVRDAATGGYVCVAMALSVDDDVGVHYVATEACHR
RAGLATRVVTALLRDARARGASTATLQATPDGASVYERIGFRRVGTMHAF
VRGGGAASA*
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mRNA from alignment at Contig_105:40108..41480+

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_12711 ID=mRNA_12711|Name=jgi.p|Trimin1|351988|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1373bp|location=Sequence derived from alignment at Contig_105:40108..41480+ (Tribonema minus UTEX_B_3156 )
GCAGCCACTCGATGCTCGCAGGATACTTGGCTAAGATCGTTATTGCCCAC TGTCTGGTCGGTGCAGTGTCTGATGCAGCAGCTTTCAGCTTCAGTGCCAA CGTATCAGGGTTCTATCTTTGCTGCCTAGGTGGGCAGCACTGTCCAGGTA TGATAAATTATAATAATGATCTGTCTCAAAAGTAAACCGAAGCCCACCGT AATTCAAGCGGCTTGCATTTTGTTTACAATTTTGATCGTGAGGGCACTAC ATATGGTTGTGGCCACCTATTTATTTGGCACGATTTCAGCATGCACATAC ATGTGCAAATCATATCCCACAGAGCATCGGCGGTCGCACTCAAGTTCTCA AAAAGGCAATGTAAGGCAGCGTGACCTGAAAGCTCATGGCTCAAGTACAA TGAGCACCCTTGGTGGCCGCTGGCTGCCAGTCGCTGGCGATCAACATCAC ACCATGCACATCATGAATGCCGCCGCTGTCGACCTGCACTGATCGCGCTT CAAATGCCCCCTGTGCTCAGCCCCCAAGCTCAGCCCGCACCGCCACCCCC ACCCCCCCCCCCCCGCCCCCTTTCCACAGCGCTCAAAAACTTGAAGCATC ACACTATGGTCAGCGATGCCGAACTCGCACGCCGCTCTCTCAAGAACTGG GGCGAACTGCTGGCCGCCGTGGGGCGCTACGCGGTGGGCCCGCACGCCGA GCTGCGCCGACCCGACGCGCTGGGGTCTCGCATCGACTCCGCAGGCGACA GCCCCTGGTTCAACGCGGCGGTGGTACCTGTCGGCGCCACCCCCCCGCAA GCCGACGACGCCAGTCTGCCGTACTGTCTCTGGACGGCCGACGCCGCCGC GGGCGCCGCGGGCCGGTCGGAGAACGCCGCCATCGCGACGCCGCTCATGG GGCTCGACCTTCGAGACGCGTCGCTGAAGTTGGACGACAGCAGCGCCTCT GCAGATGAGGAATTTCAAATCGGAGAGCCCCCCTTGGAGACGGTTGGCGA CATTAACGGTCGCGCGTACGGGCAGACCGGCGCGGCGTTCGCGGCGCTCG TGCGCGGCCTCGCCGCCAACGGCCGCGTACGTACCTACGGCGTGCGCGAC GCTGCGACCGGCGGCTACGTCTGCGTGGCCATGGCGCTGAGCGTTGATGA CGACGTCGGCGTCCACTACGTCGCCACCGAGGCATGCCACCGGCGTGCGG GGCTCGCGACGCGCGTCGTGACGGCGCTGCTGCGCGACGCGCGCGCGCGC GGCGCGAGCACTGCCACGCTGCAGGCGACGCCGGACGGCGCGTCCGTGTA CGAGCGGATCGGCTTCAGGCGCGTGGGCACCATGCACGCGTTCGTGCGCG GCGGCGGCGCGGCGAGCGCGTGA
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Coding sequence (CDS) from alignment at Contig_105:40108..41480+

>mRNA_12711 ID=mRNA_12711|Name=jgi.p|Trimin1|351988|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=930bp|location=Sequence derived from alignment at Contig_105:40108..41480+ (Tribonema minus UTEX_B_3156 )
ATGCTCGCAGGATACTTGGCTAAGATCGTTATTGCCCACTGTCTGGTCGG
TGCAGTGTCTGATGCAGCAGCTTTCAGCTTCAGTGCCAACGTATCAGGGT
TCTATCTTTGCTGCCTAGGTGGGCAGCACTGTCCAGCGCTCAAAAACTTG
AAGCATCACACTATGGTCAGCGATGCCGAACTCGCACGCCGCTCTCTCAA
GAACTGGGGCGAACTGCTGGCCGCCGTGGGGCGCTACGCGGTGGGCCCGC
ACGCCGAGCTGCGCCGACCCGACGCGCTGGGGTCTCGCATCGACTCCGCA
GGCGACAGCCCCTGGTTCAACGCGGCGGTGGTACCTGTCGGCGCCACCCC
CCCGCAAGCCGACGACGCCAGTCTGCCGTACTGTCTCTGGACGGCCGACG
CCGCCGCGGGCGCCGCGGGCCGGTCGGAGAACGCCGCCATCGCGACGCCG
CTCATGGGGCTCGACCTTCGAGACGCGTCGCTGAAGTTGGACGACAGCAG
CGCCTCTGCAGATGAGGAATTTCAAATCGGAGAGCCCCCCTTGGAGACGG
TTGGCGACATTAACGGTCGCGCGTACGGGCAGACCGGCGCGGCGTTCGCG
GCGCTCGTGCGCGGCCTCGCCGCCAACGGCCGCGTACGTACCTACGGCGT
GCGCGACGCTGCGACCGGCGGCTACGTCTGCGTGGCCATGGCGCTGAGCG
TTGATGACGACGTCGGCGTCCACTACGTCGCCACCGAGGCATGCCACCGG
CGTGCGGGGCTCGCGACGCGCGTCGTGACGGCGCTGCTGCGCGACGCGCG
CGCGCGCGGCGCGAGCACTGCCACGCTGCAGGCGACGCCGGACGGCGCGT
CCGTGTACGAGCGGATCGGCTTCAGGCGCGTGGGCACCATGCACGCGTTC
GTGCGCGGCGGCGGCGCGGCGAGCGCGTGA
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