mRNA_12662 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|139818 vs. uniprot
Match: A0A835YLW5_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLW5_9STRA) HSP 1 Score: 291 bits (745), Expect = 8.730e-100 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1 Query: 1 SHNVLITEWGRAKLTDFGLSRITSAVSSFTGRSTLVGGTVAWMAPESFGKRQGSASMSAMSDLYSYGIVTWEVLAGIRGHAESTPWYGKSVVEVISAVTIHGERLPLHEGCVSNSNISKAAMHVDVMRRCWSAQPSERPTFEEL 432 SHNVLITEWGRAKLTDFGLSRITSAVSSFTGRSTLVGGTVAWMAPESFGKRQGSASMSAMSDLYSYGIVTWEVLAGIRGHAESTPWYGKSVVEVISAVTIHGERLPLHEGCVSNSNISKAAMHVDVMRRCWSAQPSERPTFEEL Sbjct: 1 SHNVLITEWGRAKLTDFGLSRITSAVSSFTGRSTLVGGTVAWMAPESFGKRQGSASMSAMSDLYSYGIVTWEVLAGIRGHAESTPWYGKSVVEVISAVTIHGERLPLHEGCVSNSNISKAAMHVDVMRRCWSAQPSERPTFEEL 144
BLAST of jgi.p|Trimin1|139818 vs. uniprot
Match: A0A835YXR6_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXR6_9STRA) HSP 1 Score: 210 bits (534), Expect = 8.250e-67 Identity = 98/144 (68.06%), Postives = 121/144 (84.03%), Query Frame = 1 Query: 1 SHNVLITEWGRAKLTDFGLSRITSAVSSFTGRSTLVGGTVAWMAPESFGKRQGSASMSAMSDLYSYGIVTWEVLAGIRGHAESTPWYGKSVVEVISAVTIHGERLPLHEGCVSNSNISKAAMHVDVMRRCWSAQPSERPTFEEL 432 SHNVLITEWGRAKLTDFGLS+ T+AVSSFTGRST+ GGTVAWM PESFGKR SA S+ SD+YSY IVTWEVLAG G STPWYGK++VEVI+AV++ GER PL + C+ ++N+S+A +H D+M+RCW+A P++RPTF +L Sbjct: 49 SHNVLITEWGRAKLTDFGLSKTTNAVSSFTGRSTMGGGTVAWMPPESFGKRLSSALSSSKSDVYSYSIVTWEVLAGTCGVDMSTPWYGKAIVEVIAAVSMRGERPPLADECIEDTNVSRAELHADIMQRCWAADPADRPTFSDL 192
BLAST of jgi.p|Trimin1|139818 vs. uniprot
Match: A0A836CGC3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGC3_9STRA) HSP 1 Score: 204 bits (520), Expect = 1.790e-64 Identity = 101/144 (70.14%), Postives = 116/144 (80.56%), Query Frame = 1 Query: 1 SHNVLITEWGRAKLTDFGLSRITSAVSSFTGRSTLVGGTVAWMAPESFGKRQGSASMSAMSDLYSYGIVTWEVLAGIRGHAESTPWYGKSVVEVISAVTIHGERLPLHEGCVSNSNISKAAMHVDVMRRCWSAQPSERPTFEEL 432 SHNVLIT+WGRAKLTDFGLS+ TSAVSSFTGRST+ GG VA+MAPE+FG + SAS+SA SD+YSYGIVTWEVLAG+ G A STPWYG+S+VEVISAVT+ GE PL C+ N N+S A H VMRRCW+A RPTF EL Sbjct: 64 SHNVLITDWGRAKLTDFGLSKTTSAVSSFTGRSTMGGGMVAYMAPEAFGNERCSASVSAKSDVYSYGIVTWEVLAGVCGRAGSTPWYGQSIVEVISAVTLRGETPPLPMECIVNKNVSHAEAHAGVMRRCWAASALSRPTFGEL 207
BLAST of jgi.p|Trimin1|139818 vs. uniprot
Match: A0A836CB95_9STRA (Kinase-like domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB95_9STRA) HSP 1 Score: 191 bits (485), Expect = 1.330e-58 Identity = 94/144 (65.28%), Postives = 113/144 (78.47%), Query Frame = 1 Query: 1 SHNVLITEWGRAKLTDFGLSRITSAVSSFTGRSTLVGGTVAWMAPESFGKRQGSASMSAMSDLYSYGIVTWEVLAGIRGHAESTPWYGKSVVEVISAVTIHGERLPLHEGCVSNSNISKAAMHVDVMRRCWSAQPSERPTFEEL 432 S NVLIT+WGRAKLTDFGLSR T AVSSFTGRSTL GGTVAWMAPE+F R+ SA A+SD+YSY IVTWEVLAG G + PW G S+V+VI+AV I GER PL GCV+N+N++ AA H +MRRCW+A P++R F+E+ Sbjct: 95 SQNVLITDWGRAKLTDFGLSRTTDAVSSFTGRSTLAGGTVAWMAPEAFSARRRSAEHCALSDVYSYAIVTWEVLAGAIGGDAAIPWCGLSIVDVIAAVAIRGERPPLPPGCVANANVAGAARHEALMRRCWAALPADRLPFKEI 238
BLAST of jgi.p|Trimin1|139818 vs. uniprot
Match: A0A835YN29_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN29_9STRA) HSP 1 Score: 118 bits (295), Expect = 4.610e-30 Identity = 67/149 (44.97%), Postives = 96/149 (64.43%), Query Frame = 1 Query: 1 SHNVLITEWGRAKLTDFGLSRITSAVSSFT-GRSTLVGGTVAWMAPESFGKRQGSASMSAM---SDLYSYGIVTWEVLAG--IRGHAESTPWYGKSVVEVISAVTIHGERLPLHEGCVSNSNISKAAMHVDVMRRCWSAQPSERPTFEE 429 SHNVL+T+ RA LTDFG+S+ SA+++ T +ST GGT+AW APE F R G S SD+YSYGIV WEVL R ++ W + + E+++AV + G++ PL VS++N+++AA H +MRRC +A+P RP+F E Sbjct: 97 SHNVLLTDDWRAVLTDFGMSKTCSAITAATHAKSTYAGGTLAWTAPEVFKPRVGGGHRSNFTFKSDVYSYGIVVWEVLVADAARAAPQARRWIQQQMGELVAAV-LRGDQPPLPADSVSDANVARAASHEALMRRCLAAEPEARPSFRE 244
BLAST of jgi.p|Trimin1|139818 vs. uniprot
Match: A0A835Z605_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z605_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.140e-24 Identity = 66/149 (44.30%), Postives = 90/149 (60.40%), Query Frame = 1 Query: 1 SHNVLITEWGRAKLTDFGLSRITSAVSSFT-GR--STLVGGTVAWMAPESFGKRQGSASMSAMSDLYSYGIVTWEVLAGIRGHAESTPWYGKSVVEVISAVTIHGERLPLHEGCV--SNSNISKAAMHVDVMRRCWSAQPSERPTFEEL 432 SHNVLI + RAKL+DFGLSR S ++SF+ GR GT+ WM PE F A + D+YSYG+V WEVLAG G +TPW ++I+AV + GER L C ++N+ +A +H +M C +A P+ERPTF+E+ Sbjct: 1039 SHNVLIGDDFRAKLSDFGLSRTASTITSFSSGRCGGXXXXGTLNWMPPECFDASAAGAD-APKRDVYSYGMVVWEVLAGEAGPEANTPWGRTPPAQLIAAV-LRGERPALPACCDVRGDANVRRAPLHRGIMAACLAAAPAERPTFDEI 1185
BLAST of jgi.p|Trimin1|139818 vs. uniprot
Match: A0A7S0RLB7_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RLB7_9CHLO) HSP 1 Score: 85.1 bits (209), Expect = 4.740e-18 Identity = 55/144 (38.19%), Postives = 76/144 (52.78%), Query Frame = 1 Query: 1 SHNVLITEWGRAKLTDFGLSRITSAVSSFTGRSTLVGGTVAWMAPESFGKRQGSASMSAMSDLYSYGIVTWEVLAGIRGHAESTPWYGKSVVEVISAVTIHGERLPLHEGCVSNSNISKAAMHVDVMRRCWSAQPSERPTFEEL 432 S N+L+ G AK++DFGL+R S T R GT+ +MAPE F R G S A D++S+G+V WE+L G R PW V++I V RLPL E AA+ D++ RCW+A P RPT +++ Sbjct: 30 SENILLDAAGHAKISDFGLARCKYTSSLKTARREA--GTLIYMAPECFDPRVGGVSGKA--DVFSFGVVVWEMLVGSR------PWSEYREVQIIYQVAFQNARLPLPEDAAR----CPAALR-DLITRCWAADPHARPTAQDV 158
BLAST of jgi.p|Trimin1|139818 vs. uniprot
Match: A0A6U4KGP8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4KGP8_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 1.770e-16 Identity = 50/144 (34.72%), Postives = 74/144 (51.39%), Query Frame = 1 Query: 1 SHNVLITEWGRAKLTDFGLSRITSAVSSFTGRSTLVGGTVAWMAPESFGKRQGSASMSAMSDLYSYGIVTWEVLAGIRGHAESTPWYGKSVVEVISAVTIHGERLPLHEGCVSNSNISKAAMHVDVMRRCWSAQPSERPTFEEL 432 S N+L+ E K+TDFGLSR + S G T GT WMAPE + +D+YS+GI+ WEV + + P+ G + V++++AV ERLP+ G + D++ RCW+ P+ERP F E+ Sbjct: 221 SLNILLDEHWNTKVTDFGLSRFKA--DSIAGNMTGQTGTYHWMAPEVINAEK----YDERADVYSFGIILWEV------YGRAIPYEGMTPVQIVAAVVARRERLPIPAGA--------PPQYADLIARCWAHDPAERPQFSEV 344
BLAST of jgi.p|Trimin1|139818 vs. uniprot
Match: A0A2J7ZR55_9CHLO (Putative serine/threonine-protein kinase n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZR55_9CHLO) HSP 1 Score: 81.6 bits (200), Expect = 3.060e-16 Identity = 52/147 (35.37%), Postives = 79/147 (53.74%), Query Frame = 1 Query: 7 NVLITE-WGR---AKLTDFGLSRITSAVSSFTGRSTLVGGTVAWMAPESFGKRQGSASMSAMSDLYSYGIVTWEVLAGIRGHAESTPWYGKSVVEVISAVTIHGERLPLHE-GCVSNSNISKAAMHVDVMRRCWSAQPSERPTFEEL 432 NVLI + WG K++DFGLSR+ S+++ GT A++APE F + S+S +D+YS+G++ WE+LAG+R PW G VV + VT+ G RLP+ + +S ++++ CW P RP EL Sbjct: 77 NVLINDPWGERRVVKISDFGLSRLNSSIALTQSPEA---GTPAYVAPECF--EVDNYSVSYKADMYSFGVLLWEMLAGVR------PWEGLGVVPIAFQVTVKGRRLPMPPLDKLGSSPAQWPPRLCEMLQECWDQAPDRRPAAAEL 212
BLAST of jgi.p|Trimin1|139818 vs. uniprot
Match: A0A150GWX7_GONPE (Protein kinase domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GWX7_GONPE) HSP 1 Score: 84.3 bits (207), Expect = 3.180e-16 Identity = 53/138 (38.41%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 7 NVLITEWGRAKLTDFGLSRITSAVSSFTGRSTLVGGTVAWMAPESFGKRQGSASMSAMSDLYSYGIVTWEVLAGIRGHAESTPWYGKSVVEVISAVTIHGERLPLHEGCVSNSNISKAAMHVDVMRRCWSAQPSERPT 420 NVLI+ G AKL+DFGL+R+T+A T G+V +MAPE FG ++S SD++++G++ WE+LA +R PW G ++V AV+I GERLPL V + V ++ CW P RP+ Sbjct: 333 NVLISSDGTAKLSDFGLARLTAATLHATNPEV---GSVPYMAPECFGTN--GHTVSHRSDMFAFGVLLWELLARVR------PWAGSHHIKVALAVSIRGERLPL---AVIQDRAPRRL--VQLIEECWHEDPYRRPS 454 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|139818 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12662 ID=mRNA_12662|Name=jgi.p|Trimin1|139818|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=432bp|location=Sequence derived from alignment at Contig_65:224012..224772+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. AGCCACAACGTGCTCATCACGGAGTGGGGGCGCGCCAAGCTGACGGACTTback to top protein sequence of jgi.p|Trimin1|139818 >Trimin1|139818|gw1.65.50.1 ID=Trimin1|139818|gw1.65.50.1|Name=jgi.p|Trimin1|139818|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=144bp SHNVLITEWGRAKLTDFGLSRITSAVSSFTGRSTLVGGTVAWMAPESFGKback to top mRNA from alignment at Contig_65:224012..224772+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_12662 ID=mRNA_12662|Name=jgi.p|Trimin1|139818|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=761bp|location=Sequence derived from alignment at Contig_65:224012..224772+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_65:224012..224772+ >mRNA_12662 ID=mRNA_12662|Name=jgi.p|Trimin1|139818|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=432bp|location=Sequence derived from alignment at Contig_65:224012..224772+ (Tribonema minus UTEX_B_3156 )back to top |