mRNA_1249 (mRNA) Tribonema minus UTEX_B_3156
|
Overview
Homology
BLAST of jgi.p|Trimin1|129499 vs. uniprot
Match: A0A835Z7S7_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7S7_9STRA) HSP 1 Score: 427 bits (1098), Expect = 1.050e-151 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 1
Query: 1 YSAEQLPRSDIGDYIEQRVKATQPAGTSPIAVRLVTNKQLAMVVPPPIRATFCAAARELPGGIVQRDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPACNRARAYIAYVDSIAHWQPCSRRSAAYKEMLVGYIDWVRLRSFRRVHLWSAPPQEGDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSIARGCEALG 606
YSAEQLPRSDIGDYIEQRVKATQPAGTSPIAVRLVTNKQLAMVVPPPIRATFCAAARELPGGIVQRDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPACNRARAYIAYVDSIAHWQPCSRRSAAYKEMLVGYIDWVRLRSFRRVHLWSAPPQEGDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSIARGCEALG
Sbjct: 1 YSAEQLPRSDIGDYIEQRVKATQPAGTSPIAVRLVTNKQLAMVVPPPIRATFCAAARELPGGIVQRDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPACNRARAYIAYVDSIAHWQPCSRRSAAYKEMLVGYIDWVRLRSFRRVHLWSAPPQEGDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSIARGCEALG 202
BLAST of jgi.p|Trimin1|129499 vs. uniprot
Match: A0A835Z592_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z592_9STRA) HSP 1 Score: 399 bits (1026), Expect = 9.730e-139 Identity = 187/202 (92.57%), Postives = 192/202 (95.05%), Query Frame = 1
Query: 1 YSAEQLPRSDIGDYIEQRVKATQPAGTSPIAVRLVTNKQLAMVVPPPIRATFCAAARELPGGIVQRDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPACNRARAYIAYVDSIAHWQPCSRRSAAYKEMLVGYIDWVRLRSFRRVHLWSAPPQEGDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSIARGCEALG 606
YSAEQLPRSD+GDYIEQRVKATQP GTS IAVRL+TNKQLAMVVPPPIRATFCAAARELPGGIV RDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAP CNR RAYIAYVDSIAHWQPCSRRSAAY+EMLVGYIDWVRLR FR VHLWSAPP +GDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSIA+ CE LG
Sbjct: 81 YSAEQLPRSDVGDYIEQRVKATQPPGTSRIAVRLITNKQLAMVVPPPIRATFCAAARELPGGIVARDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPLCNRGRAYIAYVDSIAHWQPCSRRSAAYREMLVGYIDWVRLRGFRWVHLWSAPPSKGDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSIAQRCEELG 282
BLAST of jgi.p|Trimin1|129499 vs. uniprot
Match: A0A835YIA2_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIA2_9STRA) HSP 1 Score: 268 bits (686), Expect = 8.840e-81 Identity = 127/202 (62.87%), Postives = 152/202 (75.25%), Query Frame = 1
Query: 1 YSAEQLPRSDIGDYIEQRVKATQPAGTSPIAVRLVTNKQLAMVVPPPIRATFCAAARELPGGIVQRDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPACNRARAYIAYVDSIAHWQPCSRRSAAYKEMLVGYIDWVRLRSFRRVHLWSAPPQEGDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSIARGCEALG 606
YSAE+LPRSD+GD++E RVK TQPA P+AVRLV+N +LAM+VPPP+ ATF AA PG PLP I Y+SK LC+FQ++NGLWVL F++Y QEY DAPACNR RAYI+Y+DS AHWQP S R+AAYKE +V Y DWVR R F +HLWSAPPQEG SYVLWC P+HQ P P LR+WYH++A C+ALG
Sbjct: 497 YSAERLPRSDVGDFMELRVKNTQPADAPPLAVRLVSNTKLAMLVPPPVWATFRAA----PG-----QPLPHVIPYSSKALCMFQQINGLWVLCFVMYVQEYSGDAPACNRGRAYISYIDSAAHWQPSSARTAAYKEFVVAYADWVRRRGFGWIHLWSAPPQEGASYVLWCHPEHQATPEPDM----LRRWYHAVASRCQALG 685
BLAST of jgi.p|Trimin1|129499 vs. uniprot
Match: A0A835YPS5_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPS5_9STRA) HSP 1 Score: 211 bits (536), Expect = 4.640e-66 Identity = 106/204 (51.96%), Postives = 132/204 (64.71%), Query Frame = 1
Query: 1 YSAEQLPRSDIGDYIEQRVKATQPAGTSPIAVRLVTNKQLAMVVPPPIRATFCAAARELPGGIVQRDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPACNRARAYIAYVDSIAHWQPCSRRSAAYKEMLVGYIDWVRLRSFRRVHLWSAPPQ--EGDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSIARGCEALG 606
YSAE+LPRSD+GDY+E+ V++ PAG PIAVR V+N Q A +PPP++ATFCAA PG LP +I YTSK LCLFQ ++G WV+ F++YT EYG DAPACNR R Y++Y+DS+ + QP + RS YK +L Y DWVR R F VHLWSAP +Y+ WC PQH LRQWY IA C+ G
Sbjct: 1 YSAEKLPRSDVGDYVERCVQSVLPAGAPPIAVRFVSNCQKATSIPPPMQATFCAA----PGV-----DLPRSILYTSKALCLFQLIDGAWVMSFMLYTYEYGDDAPACNRGRVYLSYLDSVPYIQPYTCRSVVYKTVLAAYFDWVRRRGFSTVHLWSAPASTLREFAYICWCHPQHHA----TLDQPALRQWYSDIAGQCQLRG 191
BLAST of jgi.p|Trimin1|129499 vs. uniprot
Match: A0A835YQL1_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQL1_9STRA) HSP 1 Score: 204 bits (519), Expect = 1.760e-63 Identity = 103/204 (50.49%), Postives = 128/204 (62.75%), Query Frame = 1
Query: 1 YSAEQLPRSDIGDYIEQRVKATQPAGTSPIAVRLVTNKQLAMVVPPPIRATFCAAARELPGGIVQRDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPACNRARAYIAYVDSIAHWQPCSRRSAAYKEMLVGYIDWVRLRSFRRVHLWSAPPQEGD--SYVLWCRPQHQPPPPPRTQHAWLRQWYHSIARGCEALG 606
YSAE+LP SD+GDYIE V++ PAG PIAVRLV+N Q A +PPP++ATFC A PG LP +I YTSK LCLFQ +NG WV+ ++Y+ EYG D+PACNR R Y++Y+DS+ + QP + RS YK +L Y DWVR R F VHLWSAP +Y+ WC PQH LRQWY I C+ G
Sbjct: 1 YSAEKLPWSDVGDYIESCVQSVLPAGAPPIAVRLVSNCQKATSIPPPMQATFCTA----PGV-----DLPPSILYTSKALCLFQLINGAWVMSLMLYSYEYGDDSPACNRGRVYLSYLDSVTYIQPYTCRSVVYKTVLAAYFDWVRRRGFSTVHLWSAPASNVKEFAYICWCHPQHHA----TLDQTALRQWYGDIVEQCQRRG 191
BLAST of jgi.p|Trimin1|129499 vs. uniprot
Match: A0A835Z778_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z778_9STRA) HSP 1 Score: 197 bits (500), Expect = 2.070e-61 Identity = 100/137 (72.99%), Postives = 110/137 (80.29%), Query Frame = 1
Query: 1 YSAEQLPRSDIGDYIEQRVKATQPAGTSPIAVRLVTNKQLAMVVPPPIRATFCAAARELPGGIVQRDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPACNRARAYIAYVDSIAHWQPCSRRSAAYKEM 411
YSAEQL RSD+ DYIE RVKATQPAGTSPIAVRLV+NK+LAM VPPPI ATFCAA +RDPLP + TS+ LCL QEVNGLWVLLFI YTQEY ADAP CNR R YIAY+DS+AH QPCSRR AA++EM
Sbjct: 18 YSAEQLARSDVSDYIEDRVKATQPAGTSPIAVRLVSNKELAMRVPPPIPATFCAA---------ERDPLPARSKCTSQALCLSQEVNGLWVLLFIKYTQEYRADAPPCNRGRVYIAYIDSVAHSQPCSRRVAAHQEM 145
BLAST of jgi.p|Trimin1|129499 vs. uniprot
Match: A0A836CDY7_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDY7_9STRA) HSP 1 Score: 191 bits (484), Expect = 1.850e-57 Identity = 99/205 (48.29%), Postives = 130/205 (63.41%), Query Frame = 1
Query: 1 YSAEQLPRSDIGDY--IEQRVKATQPAGTSPIAVRLVTNKQLAMVVPPPIRATFCAAARELPGGIVQRDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPACNRARAYIAYVDSIAHWQPCSRRSAAYKEMLVGYIDWVRLRSFRRVHLWSAPPQEGDSYVLWCRPQHQPPPPPRTQHA-WLRQWYHSIARGCEALG 606
+SAE+LPRSD+ DY +EQRV++ P G P+ +RLV+N A+ +P P + TFCAA PG ++ L YTSK L LFQ ++G WV+ F+VY EYG DAPACNR R Y++Y+DS+ QP S RSAAY+ LV Y DWVR R F VHL SAP + YV WC P+H RT++ LR WY +A+ C++ G
Sbjct: 21 FSAEKLPRSDVSDYHDVEQRVQSVLPPGAPPVVMRLVSNCHSAVSIPAPFQHTFCAA----PGNNPRKRML-----YTSKALSLFQLIDGAWVMSFMVYAHEYGHDAPACNRGRVYVSYLDSVPFLQPYSSRSAAYQMKLVAYFDWVRRRGFGTVHLCSAPSGDDGRYVFWCHPEHH-----RTRNEDGLRAWYCEVAKQCQSHG 211
BLAST of jgi.p|Trimin1|129499 vs. uniprot
Match: A0A836CF44_9STRA (Histone acetyltransferase (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF44_9STRA) HSP 1 Score: 144 bits (362), Expect = 5.660e-39 Identity = 75/202 (37.13%), Postives = 110/202 (54.46%), Query Frame = 1
Query: 1 YSAEQLPRSDIGDYIEQRVKATQPAGTSPIAVRLVTNKQLAMVVPPPIRATFCAAARELPGGIVQRDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPACNRARAYIAYVDSIAHWQPCSRRSAAYKEMLVGYIDWVRLRSFRRVHLWSAPPQEGDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSIARGCEALG 606
Y A+ LP S + ++E++ P+G+ + VR++ N + A VP ++ATF A P P I YT+K + +FQE++G+WVL F++ EYGADAP NR R YI+Y+DS+ PC R+A ++ +L Y+D R R F + HLW P EG Y+ RP HQ P + L W ++A G A G
Sbjct: 56 YCAKSLPSSVLDRHLEEQANRLLPSGSPKVVVRMLANTRRAFYVPAQVQATFAVDA-------TGSSP-PPTIPYTAKTIGVFQELDGVWVLFFVLMAHEYGADAPLANRGRVYISYLDSVPFMWPCHARTALFQGVLHAYLDCSRRRGFTKAHLWVCAPGEGSQYLFLQRPPHQKTPDQKG----LEAWNGNMASGAVAAG 245
BLAST of jgi.p|Trimin1|129499 vs. uniprot
Match: UPI001C201AF9 (CREB-binding protein-like n=1 Tax=Aricia agestis TaxID=91739 RepID=UPI001C201AF9) HSP 1 Score: 134 bits (336), Expect = 1.220e-32 Identity = 70/197 (35.53%), Postives = 109/197 (55.33%), Query Frame = 1
Query: 1 YSAEQLPRSDIGDYIEQRVK---ATQPAGTSPIAVRLVTNKQLAMVVPPPIRATFCAAARELPGGIVQRDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPACNRARAYIAYVDSIAHWQPCSRRSAAYKEMLVGYIDWVRLRSFRRVHLWSAPPQEGDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSI 582
+SA++LP S +G YIE RV + AG + +R+V + + V P +R+ F VQ L Y +K L F+EV+G V F ++ QEYG+++P+ N R YIAY+DS+ +QP R+AAY E+++GY+D+ + + H+W+ PP EGD Y+ C P Q P P+ L++WY +
Sbjct: 681 FSAKRLPTSKLGIYIETRVNNFLKKKEAGVGEVHIRVVASSDKVVEVKPGMRSRF-----------VQSRELSSEFPYRAKALFAFEEVDGTDVCFFGMHVQEYGSESPSPNTRRVYIAYLDSVHFFQPKQYRTAAYHEIILGYLDYAKQLGYTMAHIWACPPSEGDDYIFHCHPPDQKIPKPKR----LQEWYKKM 862
BLAST of jgi.p|Trimin1|129499 vs. uniprot
Match: A0A183IGD9_9BILA (Histone acetyltransferase n=1 Tax=Soboliphyme baturini TaxID=241478 RepID=A0A183IGD9_9BILA) HSP 1 Score: 129 bits (323), Expect = 6.870e-31 Identity = 63/197 (31.98%), Postives = 107/197 (54.31%), Query Frame = 1
Query: 1 YSAEQLPRSDIGDYIEQRVKA---TQPAGTSPIAVRLVTNKQLAMVVPPPIRATFCAAARELPGGIVQRDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPACNRARAYIAYVDSIAHWQPCSRRSAAYKEMLVGYIDWVRLRSFRRVHLWSAPPQEGDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSI 582
++A++LP S + +IE RV + G + +R++T+ + V +R FC + +PE Y SK + F+ ++G+ + F ++ QEYG++ P N R YIAY+DS+ +QP R+A Y E+L+GY+++V+L + H+W+ PP EGD Y+ C P Q P P+ L++WY +
Sbjct: 997 FTAKRLPHSKLSFHIENRVNTYLKKKDVGAGEVIIRVLTSSDKEVEVKQHMRNKFCGSGE-----------IPEKFPYRSKAIFAFEALDGIEICFFGLHVQEYGSNCPPPNSRRVYIAYLDSVHFFQPKQFRTAVYHEILLGYLEYVKLLGYTMAHIWACPPSEGDDYIFHCHPPEQKIPKPKR----LQEWYKKM 1178 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|129499 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_1249 ID=mRNA_1249|Name=jgi.p|Trimin1|129499|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=606bp|location=Sequence derived from alignment at Contig_18:120055..120660+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. TACTCCGCAGAGCAGCTGCCGCGCTCGGATATAGGCGACTACATCGAGCAback to top protein sequence of jgi.p|Trimin1|129499 >Trimin1|129499|gw1.18.11.1 ID=Trimin1|129499|gw1.18.11.1|Name=jgi.p|Trimin1|129499|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=202bp YSAEQLPRSDIGDYIEQRVKATQPAGTSPIAVRLVTNKQLAMVVPPPIRAback to top mRNA from alignment at Contig_18:120055..120660+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_1249 ID=mRNA_1249|Name=jgi.p|Trimin1|129499|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=606bp|location=Sequence derived from alignment at Contig_18:120055..120660+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_18:120055..120660+ >mRNA_1249 ID=mRNA_1249|Name=jgi.p|Trimin1|129499|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=606bp|location=Sequence derived from alignment at Contig_18:120055..120660+ (Tribonema minus UTEX_B_3156 )back to top |