mRNA_12333 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|176218
Unique NamemRNA_12333
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|176218 vs. uniprot
Match: A0A836CLR4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLR4_9STRA)

HSP 1 Score: 646 bits (1666), Expect = 1.310e-233
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 1
Query:    1 MRNLQAGAGNQSPETAEEAAAEAARRKGSPWDSVPEAVRQSYEQVLKTIIDRPDSITLTDAVEAAYNKCDIQFLALLKEKMASASGDSKVQLVEVADEVNNAMQRRMSSATSKLQTILSAGNPIAIEAAAAKLARAGEADDALVLLLEANLQEAHKAGPQGAGAVRVLTNVKNILQAEIDRKLEPEKRLLKQCLRCDTAEEMEAVLHEAFRPRVKLQLAENKESSDEPLVAPPAFIAAVRNLKLNFGNVGEDETEFADKVDVIISTAEKVATALYGESMSPKDQQDRAWREHGASVWDLEKLENDAMLRGEEMPWANDKYDTMLPNLNKGDKSGEFKIGGS 1023
            MRNLQAGAGNQSPETAEEAAAEAARRKGSPWDSVPEAVRQSYEQVLKTIIDRPDSITLTDAVEAAYNKCDIQFLALLKEKMASASGDSKVQLVEVADEVNNAMQRRMSSATSKLQTILSAGNPIAIEAAAAKLARAGEADDALVLLLEANLQEAHKAGPQGAGAVRVLTNVKNILQAEIDRKLEPEKRLLKQCLRCDTAEEMEAVLHEAFRPRVKLQLAENKESSDEPLVAPPAFIAAVRNLKLNFGNVGEDETEFADKVDVIISTAEKVATALYGESMSPKDQQDRAWREHGASVWDLEKLENDAMLRGEEMPWANDKYDTMLPNLNKGDKSGEFKIGGS
Sbjct:    1 MRNLQAGAGNQSPETAEEAAAEAARRKGSPWDSVPEAVRQSYEQVLKTIIDRPDSITLTDAVEAAYNKCDIQFLALLKEKMASASGDSKVQLVEVADEVNNAMQRRMSSATSKLQTILSAGNPIAIEAAAAKLARAGEADDALVLLLEANLQEAHKAGPQGAGAVRVLTNVKNILQAEIDRKLEPEKRLLKQCLRCDTAEEMEAVLHEAFRPRVKLQLAENKESSDEPLVAPPAFIAAVRNLKLNFGNVGEDETEFADKVDVIISTAEKVATALYGESMSPKDQQDRAWREHGASVWDLEKLENDAMLRGEEMPWANDKYDTMLPNLNKGDKSGEFKIGGS 341          
BLAST of jgi.p|Trimin1|176218 vs. uniprot
Match: D7FSF0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSF0_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 6.660e-89
Identity = 157/319 (49.22%), Postives = 209/319 (65.52%), Query Frame = 1
Query:   85 SPWDSVPEAVRQSYEQVLKTIIDRPDSITLTDAVEAAYNKCDIQFLALLKEKMASASG-DSKVQLVEVADEVNNAMQRRMSSATSKLQTILSAGNPIAIEAAAAKLARAGEADDALVLLLEANLQEAHKA--GPQGAGAVRVLTNVKNILQAEIDRKLEPEKRLLKQCLRCDTAEEMEAVLHEAFRPRVKLQLAENKESSDEPLVAPPAFIAAVRNLKLNFGNVGEDETEFADKVDVIISTAEKVATALYGESMSPKDQQDRAWREHGASVWDLEKLENDAMLRGEEMPWANDKYDTMLPNLNKG---DKSGEFKIGGS 1023
            +P++ +P  VR  YE +L  +++R D  +L DAVE  Y++ DIQFL LL +K   A G D+   L  + D +NN MQRRM+ A+ +LQ IL+ GNP  +E     +A  GE DDALVLLL+ANLQ+A +A  GP    AV VL  +    QA +D K++PEKRL++Q LR    E    +L +AFR R K+ LA+  E+S+ P VAPP FI  V+ +  NFGNVGE E  FA ++D +IS AE+VAT LYGES SP+D QDRAW++   SV+DLE +E D  LRGE+MPWANDKYD M P + K    D+ G  +IGG+
Sbjct:   31 NPFEGLPTKVRAGYENLLGKLLNREDGESLEDAVETNYDQVDIQFLTLLNQKAQEAEGTDAAAALTRLGDSINNTMQRRMAQASERLQKILTVGNPERMEETIKAMAERGEVDDALVLLLQANLQQAEEADAGP----AVGVLKRLGAAAQAALDEKVDPEKRLVRQLLRAKDREARLNILTKAFRQRAKVVLADGSETSEAPDVAPPKFIETVKGIIRNFGNVGESELGFAQQLDDMISEAEQVATELYGESQSPQDMQDRAWKDATVSVFDLENMEEDGKLRGEDMPWANDKYDGMTPEMVKNFKQDEDGNLQIGGT 345          
BLAST of jgi.p|Trimin1|176218 vs. uniprot
Match: A0A6U1M7L3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1M7L3_9STRA)

HSP 1 Score: 188 bits (477), Expect = 1.680e-52
Identity = 119/299 (39.80%), Postives = 171/299 (57.19%), Query Frame = 1
Query:  172 LTDAVEAAYNKCDIQFLALLKEKMASAS-GDSKVQLVEVADEVNNAMQRRMSSATSKLQTILSAGNPIAIEAAAAKLARAGEADDALVLLLEANLQEAHKAGPQGAGAVRVLTNVKNILQAEIDRKLEPEKRLLKQCLRCDTAEEMEAVLHEAFRPRVKLQLAEN--------------KESSDEPLVAPPAFIAAVRNLKLNFGNVGE-DETEFADKVDVIISTAEKVATALYGESMSPKDQQDRAWREHGASVWDLEKLENDAMLRGEEMPWANDKYDTMLPNLNKGDKSGEFKIGG 1020
            L   VEA Y++ D+QF+  +K K    S G +      +  E+N  M  R   AT+ LQ IL AG+P  +E    K+A  G  D+AL+LLLE N+ +A +AG   A A +V+  +  + Q+E+DRK++PEK+LL+Q LR D     + +L  AF+P+    LA +              +ES   P VAPPAFIA  + +   FGN+ +      AD++  I   AE VAT++YGESM+ ++QQD+ W E   SV+DLEK+EN A  +GE MPW ND YD M P ++   + G+  IGG
Sbjct:  128 LPTVVEAYYDQLDLQFIETIKAKSNDPSEGSNNEVYAAILGEINKIMAVRYEKATATLQQILEAGHPKLMEMEITKVAARGGVDEALLLLLEGNILQAKQAGV--AQAAQVMEGLLQVCQSEVDRKMDPEKKLLRQLLRTDDTNARKKMLEAAFKPKEAFVLASSADQNVIQGGGSSGQQESKKAPDVAPPAFIAECKAVIEQFGNIEDTSNAALADRLRKITDEAEGVATSIYGESMTAREQQDKMWNEGTISVFDLEKIENAAEAQGEAMPWKNDGYDHMTP-VDVLTQKGKIDIGG 423          
BLAST of jgi.p|Trimin1|176218 vs. uniprot
Match: A0A7S3K3F7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3F7_9STRA)

HSP 1 Score: 181 bits (460), Expect = 2.440e-49
Identity = 111/301 (36.88%), Postives = 166/301 (55.15%), Query Frame = 1
Query:  109 AVRQSYEQVLKTIIDRPDSITLTDAVEAAYNKCDIQFLALLKEKMASASGDSKVQLVEVADEVNNAMQRRMSSATSKLQTILSAGNPIAIEAAAAKLARAGEADDALVLLLEANLQEAHKAGPQGAGAVRVLTNVKNILQAEIDRKLEPEKRLLKQCLRCDTAEEMEAVLHEAFRPRVKLQL----AENKESSDEPLVAPPAFIAAVRNLKLNFGNVGEDETE--------FADKVDVIISTAEKVATALYGESMSPKDQQDRAWREHGASVWDLEKLENDAMLRGEEMPWANDKYDTMLP 975
            A+  +YE +L  +++  ++  L   VEA+Y +CD   LAL   +    +  +      + +++N   +++++ AT +LQ +L AG P  +     +LA  G  D  L+ LL+AN Q+A  AG + A    ++ N+ N  + E+DR  +P K+LL+  LRCDT    E ++  AF P+  + L    A+ K   D   V PP FIAA + L  +FGN+  D T          ADKV  I   AE +A  L+GES+SP++QQDRAW E   SV+DLE  E  A  +G+ MPW ND+YD MLP
Sbjct:  191 AILITYEALLTRLVEAYENDRLDSEVEASYEQCDYSLLALASGRAQDKNHPNAEACQAIVNKINQMAKQKLALATERLQAVLRAGTPEKMFQKIIELAARGAIDRVLIELLDANRQQAQAAGAKDAA--NLMNNLANKCRDELDRNFDPPKKLLRALLRCDTPSARETLIRRAFEPKEAIALGFDGAQTKGGCD---VEPPDFIAACQTLIADFGNLELDSTTQTDTNNFLLADKVRAIAEQAEAIAIELFGESLSPREQQDRAWNEATTSVFDLEAAELAAETQGDRMPWQNDEYDDMLP 486          
BLAST of jgi.p|Trimin1|176218 vs. uniprot
Match: W7TEP8_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEP8_9STRA)

HSP 1 Score: 179 bits (455), Expect = 3.940e-48
Identity = 113/307 (36.81%), Postives = 175/307 (57.00%), Query Frame = 1
Query:  115 RQSYEQVLKTII--DRPDSITLTDAVEAAYNKCDIQFLALLKEKMASASGDSKVQ--LVEVADEVNNAMQRRMSSATSKLQTILSAGNPIAIEAAAAKLARAGEADDALVLLLEANLQEAHKAGPQGAGAVRVLTNVKNILQAEIDRKLEPEKRLLKQCLRCDTAEEMEAVLHEAFRPRVKLQLAENKESSDEPLVAPPAFIAAVRNLKLNFGNVGEDETEFADKVDVIISTAEKVATALYGESMSPKDQQDRAWREHGASVWDLEKLENDAMLRGEEMPWANDKYDTMLPNLNKGDKSGEFKIGGS 1023
            +QSYEQ+L+  +  D      + + VEA Y +C ++FL LL E++   S    VQ  L+ +   + + ++ RMS A  +LQ+I+ AG    +     +L +  E D+ L+LLLE N+Q+A +AG   A A  +   +    +  ID KL    RL+++ LR    E+ + +LH+AFRP+     AE  ++   P V PP FI  +R L  NFGN+  D   FA+K+  ++  AE+V+T +YG++MS ++QQD  W++   SV+DLE LE  A   G++MPW ND YD M+P    G + G   IGG+
Sbjct:  235 KQSYEQLLEAFLGLDFGKEEYVREVVEANYERCTMEFLDLLGERLKDDSTPPGVQSRLMALKGHIEDILRARMSRAAERLQSIVKAGALDEMVDQVYELNQRNEVDEPLILLLETNVQQAERAG--AAPAAELFRKLLATAREAIDEKLSMSTRLVRRLLRVADPEKRKEILHDAFRPKASALTAEGAKTGAMPDVPPPDFIEELRQLIKNFGNIETDN--FAEKLRTLVEEAEEVSTTIYGKAMSHREQQDYMWQKGSISVFDLEALEGKAQAVGDQMPWQNDAYDNMMP---PGFEDGVRTIGGN 534          
BLAST of jgi.p|Trimin1|176218 vs. uniprot
Match: A0A6T8J2K2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8J2K2_9STRA)

HSP 1 Score: 175 bits (443), Expect = 1.130e-46
Identity = 121/325 (37.23%), Postives = 181/325 (55.69%), Query Frame = 1
Query:   94 DSVPEAVRQSYEQVLKTIIDRPDSITLTDAVEAA-YNKCDIQFLALLKEKMASASGDSKVQLVEVADEVNNAMQRRMSSATSKLQTILSAGNPIAIEAAAAKLARAGEADDALVLLLEANLQEAHKAGPQGAGAVRVLTNVKNILQAEIDRKLEPEK-RLLKQCLRCDTAEEMEAVLHEAFRPRVKLQL---AEN----------KESSDEPLVAPPAFIAAVRNLKLNFGNVGEDETEFADKVDVIISTAEKVATALYGESMSPKDQQDRAWREHGASVWDLEKLENDAMLRGEEMPWAN-DKYDTMLPNLNKGDKSGEFKIGG 1020
            D  PE +R +YE+++  ++    +    + V A  Y+K D Q + +L E+  +  GDSK  +  +A E       RM +AT KL+TIL  G+P+ +E A  K+ R  E D+ L+LLLEAN  +A +AG    GA  ++  +KN   AE D+    ++ +LL+Q LR D  E+ + +L +AF P+  L +   AEN          ++    P V PP FI   + + LNFGNV + + + + KV +I S AE VAT +YG+ MS ++QQDRAW++   S++DLE LE +A   G   PWAN D  D +LP     D  G+  IGG
Sbjct:  212 DLTPE-IRSTYEKLVAKLLPPYRTGESVETVTAKNYDKFDAQLMKVLTERAENGDGDSKAVMQALAME----QAARMMAATEKLKTILGMGDPMRMEGAIVKMCRNDEVDETLLLLLEANAVQAEQAG--AIGAAELMRKLKNRADAEKDKNASSKEIKLLRQLLREDNPEKRQEILTDAFTPKESLIVPGTAENAARAVDGEAPEDEKPMPEVPPPDFINCCKAVMLNFGNVSDGKQDLSGKVKIIASEAEVVATRIYGQGMSSREQQDRAWKDSTRSIFDLETLEIEAERMGVTAPWANADAGDEILPGF---DADGKMSIGG 526          
BLAST of jgi.p|Trimin1|176218 vs. uniprot
Match: A0A8J2SZA0_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZA0_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.170e-46
Identity = 110/314 (35.03%), Postives = 171/314 (54.46%), Query Frame = 1
Query:  118 QSYEQVLKTIIDRPDSITLTDAVEAAYNKCDIQFLALLKEKMASASGDSKVQLVEVADEVNNAMQRRMSSATSKLQTILSAGNPIAIEAAAAKLARAGEADDALVLLLEANLQEAHKAGPQGAGAVRVLTNVKNILQAEIDRKLE---PEKRLLKQCLRCDTAEEMEAVLHEAFRPRVKLQLAEN--------KESSDEPLVAPPAFIAAVRNLKLNFGNVGEDETEFADKVDVIISTAEKVATALYGESMSPKDQQDRAWREHGASVWDLEKLENDAMLRGEEMPWANDKYDTMLPNLNKGDKSGEF--KIGG 1020
            ++Y+ +L   +       L  AVE A+ +CD   LAL  E+  +        L  + + VN+   +R+  A ++L T++  G+P  + A   +LA   + D  LV LL+AN Q+A  AG  GAGA  ++ N+ N  + E+D+++    PEKRLL+  LR D  E  + +L  AF P+  L L+          K++ + P V P  FIAA + L  +FGN+ ++      +++ I + AE VAT LYG+  S ++QQD  W E   SV+DLE  E  A  +GE+MPW ND YD  LP+    D++G++  K+GG
Sbjct:  196 RTYDALLSEFVQAEAKGELAAAVEGAFERCDYSLLALATERRDAGDRPDTQALNAIIEAVNSLSAKRLEQAAARLGTVMQQGSPEKMFAKIQELAIINQIDAPLVELLDANRQQALAAGAAGAGAAELMKNLANRCRDEMDKRIAKDAPEKRLLRALLRTDDDETKKTILQRAFEPKEGLALSFGEDYGKDAAKKTQEGPEVDPTKFIAACQQLIADFGNIDDNGEPLMVRINQIAAIAETVATELYGDVTSAREQQDLMWNEATTSVFDLEAAELAAEQKGEQMPWHNDSYDGKLPDGFTADQAGQYIKKVGG 509          
BLAST of jgi.p|Trimin1|176218 vs. uniprot
Match: A0A7R9WBE0_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WBE0_9STRA)

HSP 1 Score: 167 bits (424), Expect = 5.740e-45
Identity = 118/334 (35.33%), Postives = 184/334 (55.09%), Query Frame = 1
Query:   94 DSVPEAVRQSYEQVLKTII------DRPDSITLTDAVEAAYNKCDIQFLALLKEKMASASGDSKVQLVEVADEVNNAMQRRMSSATSKLQTILSAGNPIAIEAAAAKLARAGEADDALVLLLEANLQEAHKAGPQGAGAVRVLTNVKNILQAEIDRKLEPEK-RLLKQCLRCDTAEEMEAVLHEAFRPRVKLQL---AENKESS--------DEPL--VAPPAFIAAVRNLKLNFGNVG----EDETEFADKVDVIISTAEKVATALYGESMSPKDQQDRAWREHGASVWDLEKLENDAMLRGEEMPWANDKYDTMLPNLNKGDKSGEFKIGGS 1023
            D  PE +R SYE +LK ++      D P S+         Y++ D QF+ +L E+  +   D+   L  +ADE     Q+R+++AT  L+ +LS G P+ +E A  +LAR G+ D+  +LLLEAN  +A  AG   AG   ++  +      E D++   ++ RLL++ LR D   E E +L +AF P+  L +   AEN + +        ++PL  V PP FI A + + LNFGN+     +D  +   ++  I + AE VAT +YG+ M+ ++QQDRAW E  AS++DLE++E +A   G + PWA D+ + +LP     D  G  K+GGS
Sbjct:   84 DITPE-IRASYEDLLKKVLPPYKPGDTPSSVVFN-----YYDQFDAQFVKVLSERQNNGDADAGALLDALADE----QQKRIAAATDTLKEVLSLGEPMRMEGAIVRLAREGKIDEPFLLLLEANANQAAAAG--AAGPAELMRRLGKRAAEEKDKQSSTKEIRLLRKLLREDDPAERERLLEDAFTPKESLIVPGTAENAQKAVDGELPEEEQPLPDVPPPDFINACKAVTLNFGNLSAGDDDDRGDLTTRIKTIAAEAEVVATRIYGKGMTAREQQDRAWSEQTASIFDLERMEIEAEQMGTKAPWATDEENDILPGF---DGDGMMKVGGS 402          
BLAST of jgi.p|Trimin1|176218 vs. uniprot
Match: K0TLD5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLD5_THAOC)

HSP 1 Score: 169 bits (428), Expect = 7.890e-45
Identity = 122/342 (35.67%), Postives = 184/342 (53.80%), Query Frame = 1
Query:   64 EAARRKGSPWDSVPEAVRQSYEQVLKTII------DRPDSITLTDAVEAAYNKCDIQFLALLKEKMASASGDSKVQLVEVADEVNNAMQRRMSSATSKLQTILSAGNPIAIEAAAAKLARAGEADDALVLLLEANLQEAHKAGPQGAGAVRVLTNVKNILQAEIDRK-LEPEKRLLKQCLRCDTAEEMEAVLHEAFRPRVKL----------QLAENKESSDE---PLVAPPAFIAAVRNLKLNFGNVGEDET--EFADKVDVIISTAEKVATALYGESMSPKDQQDRAWREHGASVWDLEKLENDAMLRGEEMPWANDKYDTMLPNLNKGDKSGEFKIGGS 1023
            E A+RK      +   VR SYE +   ++      D P ++     V A Y++ D QF+ +L E+  +  GDS+  L  +A E     Q+R++ AT  L+ +LS G+P+ +E A  +LA+ G+ D+A +LLLEAN  +A  AG    G   ++T ++     E D++    E +LL+Q LR D + + E +L EAF P+  L          +  E + + DE   P V PP FI   + + LNFGN+  DE   + + ++  I S AE VAT +YG+ M+ ++QQDRAW+E   S++DLE LE +A  RGE  PWA D  D + P        G+  IGGS
Sbjct:  158 EGAKRKTFYEAEITPEVRASYEDMCSKVLPPYRAGDTPATV-----VFAYYDQFDAQFIKVLNERAMNGDGDSQALLDALAVE----QQKRVNDATENLRDVLSKGDPMRMEGAIVRLAKEGKIDEAFLLLLEANADQARAAG--ATGPAELMTKLRERAMNEKDKQSASKEIKLLRQLLREDDSSKREDLLTEAFTPKEALIVPGTMENAERAMEGEVAEDEKPMPDVPPPDFINCCKAVLLNFGNLNIDEERGDLSVQIKQIASEAEVVATRIYGKGMTQREQQDRAWKEQTTSIFDLETLEIEAERRGETAPWATDAPDEIFPGFGP---DGKMSIGGS 485          
BLAST of jgi.p|Trimin1|176218 vs. uniprot
Match: A0A7S4UWT9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UWT9_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.570e-44
Identity = 117/326 (35.89%), Postives = 180/326 (55.21%), Query Frame = 1
Query:  112 VRQSYEQVLKTII------DRPDSITLTDAVEAAYNKCDIQFLALLKEKMASASGDSKVQLVEVADEVNNAMQRRMSSATSKLQTILSAGNPIAIEAAAAKLARAGEADDALVLLLEANLQEAHKAGPQGAGAVRVLTNVKNILQAEIDRKL-EPEKRLLKQCLRCDTAEEMEAVLHEAFRPRVKLQLAENKESS---------DE----PLVAPPAFIAAVRNLKLNFGNVGEDET--EFADKVDVIISTAEKVATALYGESMSPKDQQDRAWREHGASVWDLEKLENDAMLRGEEMPWANDKYDTMLPNLNKGDKSGEFKIGGS 1023
            +R SYE ++K ++      D P SI     V + Y++ D QF+ +L E+ ++   +S+     V D +    Q+R+ +AT  L+ +LS G P+ +E A  ++ARAG+ D+  +LLLEAN  +A +AG  G   +  +  +K   + E D++    E RLL++ LR D + E EA+L EAF P+  L +A   +++         DE    P V PP FI A + + LNFGN+  D+   +   ++  I S AE VAT +YG+ MS K+QQDRAW++   S++DLE LE +A   G+  PW N   D +LP     D  G   IGG+
Sbjct:  235 IRLSYEDMVKKVLPPYKAGDSPASI-----VFSYYDQFDAQFVKVLTERASNGEVESQA----VLDALGVEQQKRIGAATEALKEVLSQGEPMRMEGAIVRMARAGKIDEPFLLLLEANANQAAEAGAMGPATL--MRKLKKRAEDEKDKQTTSKEVRLLRKLLRTDDSAEREAILEEAFTPKEVLLVAGTPQNAAKAADGELPDEEKPMPDVPPPDFINACKAVLLNFGNLSTDDDRGDLGTRIKTIASEAEVVATRIYGKGMSVKEQQDRAWKDSTTSIFDLETLEIEAERMGQAAPWTNPDNDDILPGF---DPDGRMSIGGN 546          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|176218 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CLR4_9STRA1.310e-233100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FSF0_ECTSI6.660e-8949.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6U1M7L3_9STRA1.680e-5239.80Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3K3F7_9STRA2.440e-4936.88Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
W7TEP8_9STRA3.940e-4836.81Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A6T8J2K2_9STRA1.130e-4637.23Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A8J2SZA0_9STRA1.170e-4635.03Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7R9WBE0_9STRA5.740e-4535.33Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
K0TLD5_THAOC7.890e-4535.67Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S4UWT9_9STRA1.570e-4435.89Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_134contigContig_134:327131..331216 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|176218|e_gw1.134.76.1
Max annot lvl2759|Eukaryota
EggNOG OGs2AUPK@1|root,2RZUJ@2759|Eukaryota
Evalue1.09e-89
Seed ortholog2880.D7FSF0
Hectar predicted targeting categoryother localisation
TranscriptId176540
TrackFilteredModels1
ProteinId176218
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|176218gene_12333Tribonema minus UTEX_B_3156 geneContig_134 327131..331216 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_12333_1exon_12333_1Tribonema minus UTEX_B_3156 exonContig_134 327131..327295 +
exon_12333_2exon_12333_2Tribonema minus UTEX_B_3156 exonContig_134 328554..328769 +
exon_12333_3exon_12333_3Tribonema minus UTEX_B_3156 exonContig_134 329509..329642 +
exon_12333_4exon_12333_4Tribonema minus UTEX_B_3156 exonContig_134 330706..331216 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_12333CDS_12333Tribonema minus UTEX_B_3156 CDSContig_134 327131..327295 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|176218Trimin1|176218|e_gw1.134.76.1Tribonema minus UTEX_B_3156 polypeptideContig_134 327131..331216 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_12333 ID=mRNA_12333|Name=jgi.p|Trimin1|176218|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1026bp|location=Sequence derived from alignment at Contig_134:327131..331216+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCGCAACCTTCAGGCTGGCGCCGGCAACCAGTCACCGGAAACTGCTGA
GGAAGCTGCTGCGGAGGCTGCAAGGAGGAAGGGCAGTCCCTGGGACTCTG
TGCCAGAAGCTGTGCGGCAGTCATATGAACAAGTCCTCAAGACCATTATC
GACAGACCTGATTCTATCACCTTGACGGACGCAGTAGAGGCTGCTTACAA
CAAGTGCGACATTCAGTTCCTGGCTCTACTGAAGGAGAAGATGGCCAGTG
CTTCTGGTGACTCTAAAGTCCAGCTCGTGGAGGTGGCAGATGAGGTCAAC
AATGCCATGCAGCGCCGCATGAGCTCAGCTACTAGCAAGCTTCAGACAAT
ACTCAGCGCTGGCAACCCCATTGCTATTGAGGCGGCTGCTGCTAAGTTGG
CTCGAGCGGGTGAGGCAGACGATGCGCTAGTGCTGCTGCTGGAGGCTAAC
CTTCAAGAGGCACACAAGGCAGGACCACAGGGAGCCGGCGCGGTTAGGGT
GCTTACCAACGTCAAGAATATCCTACAGGCAGAAATCGATCGCAAGCTGG
AGCCTGAGAAGCGCCTGTTGAAGCAGTGCCTGCGATGCGATACAGCAGAA
GAAATGGAGGCGGTGCTGCATGAGGCATTCAGGCCACGTGTCAAGCTGCA
ACTGGCTGAGAACAAGGAGAGCAGTGATGAACCCCTTGTGGCACCACCCG
CATTCATCGCAGCGGTGCGCAACCTCAAGTTGAACTTTGGAAATGTAGGC
GAGGACGAGACGGAGTTTGCAGACAAGGTGGATGTGATCATTTCGACCGC
AGAGAAGGTGGCAACGGCCTTGTATGGCGAGAGCATGAGTCCCAAGGATC
AACAGGACAGGGCATGGCGAGAGCACGGTGCCAGTGTGTGGGATCTTGAG
AAGCTAGAGAATGACGCCATGTTAAGGGGGGAGGAGATGCCATGGGCAAA
CGACAAGTATGACACTATGTTGCCAAATCTCAACAAAGGTGACAAGTCTG
GCGAGTTCAAGATTGGTGGCTCGTAG
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protein sequence of jgi.p|Trimin1|176218

>Trimin1|176218|e_gw1.134.76.1 ID=Trimin1|176218|e_gw1.134.76.1|Name=jgi.p|Trimin1|176218|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=342bp
MRNLQAGAGNQSPETAEEAAAEAARRKGSPWDSVPEAVRQSYEQVLKTII
DRPDSITLTDAVEAAYNKCDIQFLALLKEKMASASGDSKVQLVEVADEVN
NAMQRRMSSATSKLQTILSAGNPIAIEAAAAKLARAGEADDALVLLLEAN
LQEAHKAGPQGAGAVRVLTNVKNILQAEIDRKLEPEKRLLKQCLRCDTAE
EMEAVLHEAFRPRVKLQLAENKESSDEPLVAPPAFIAAVRNLKLNFGNVG
EDETEFADKVDVIISTAEKVATALYGESMSPKDQQDRAWREHGASVWDLE
KLENDAMLRGEEMPWANDKYDTMLPNLNKGDKSGEFKIGGS*
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mRNA from alignment at Contig_134:327131..331216+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_12333 ID=mRNA_12333|Name=jgi.p|Trimin1|176218|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4086bp|location=Sequence derived from alignment at Contig_134:327131..331216+ (Tribonema minus UTEX_B_3156 )
ATGCGCAACCTTCAGGCTGGCGCCGGCAACCAGTCACCGGAAACTGCTGA GGAAGCTGCTGCGGAGGCTGCAAGGAGGAAGGGCAGTCCCTGGGACTCTG TGCCAGAAGCTGTGCGGCAGTCATATGAACAAGTCCTCAAGACCATTATC GACAGACCTGATTCTGTAAGTGTCTACCGTGCGATATAAATGATGGGTAC ATGGTGGTTGCATAAGTTATATGCTGGCTAGTGCTGTGCAACCTAAATGA ACAGTGCAACGAGTCAAACTTGACAGGACGTTATTGTTGCACGACTGGGG CATAAGCATTACATGTTGTCTAGTCCATCTGGTCCCGTTGACCCTTCGAA TGCTTATGAATCAGAAAATGTGGAAGTTGTGAAGAGTTGCGAATCGGTCC ACCAACTGTCTGAATTGCAGTCGGACGGACGTATTGTCCGTGCAAACAAT ACATCCAATACGGATTTTGGCAACTACCGCCATCTTTGACCGTCTTTTCC TTTCAGCCGGTCTTGCCAGTCAGACAGCGTCGTAGTCAGACAGCGTCGTA TGACCTGTCTACATTTCACCCATGACCCTGCTAGGCTACGGTCTGACTTG TTGTAGGACAGCAACAGTGCTCGCGCAGGTACCATATTATAATGAAGTAA GTAGGTCTCTTCTAACGAATCCATTGTGCTGTCAGGTCTATCGTGGAGGT TTGCAAGTGCTTTGAGGTGCAAGTTTTTTATGCTATAAGTGTTGCTGTCT GACACGAGCTGTATGCACAGTCCCAGGCAAGTAGCGGACGTAAACCCTTT GCCTGTCTCAGTGTACCTACAACGAAGGGCGATACCACAACTTCATGCTG CATGGCAAGCGCGCCACATGCACTTTATTTCCCAGACTTCAAACTTGAAA TGAAGTTGAAGTGATAGCCTCGCCACCTACAGTCAGCGCGGCAGCAGCAC TCGTCGTGGCATTGTATGTGAGGCACACGCCTGGTGCTGCATTGATATTA GCTGTGCGAGCCATTTGATAAAATAAGCCGAAATTTGGTTCTCTGAGTTT CCGCTTGTCGGCTATGCCGTCTAGCCGAAAACGAGCTGGTCAGCCGGTTT CGGCGCGTAACCTTGGGAGTTAACTGTGCTGAAGCCTGTTGCTGCACGTA GAGTTGTTGTATAGTTAGCGACCCCAATGCAAACGGCTGTGCTTCTGATG CTTTGGCTGTAAGTGCGGTGCTTTGGTTTGAAACTGGCACTCCAACAGTG AACGCGAAGATGGATGATTAAGCCATGTTCCACATGGACCACGGTCCCAC CAAATTGCAACCAGTGTGTGCTGATCATGAGAAGTACTGTTGTTGCTACG AACCATACCACACTGATATGTGACAGTTTGTGCTCATGCGCTCCTGTTGT GTGTTGTGCAATCGACGCTACAGATCACCTTGACGGACGCAGTAGAGGCT GCTTACAACAAGTGCGACATTCAGTTCCTGGCTCTACTGAAGGAGAAGAT GGCCAGTGCTTCTGGTGACTCTAAAGTCCAGCTCGTGGAGGTGGCAGATG AGGTCAACAATGCCATGCAGCGCCGCATGAGCTCAGCTACTAGCAAGCTT CAGACAATACTCAGCGCTGGCAACCCCATTGCTATTGAGGTACGTAAGCA GTCTGGCATGGTTGGTTGCAGGTGGAAGTTTGGTATGGTGTATGAACATG CATGACGTCTATCACAAATCTATATGCTATGACAGACATTGCAGGACAGG GCAAACAACAAGTCACACTACACTACACTACATCCCACATGTCTCCGCAG CATGCTGCCATTTGTACAGTATACTCATGCGCAATTCTTGTATAGTCTTC CAGTCGGTGATAGCGTTGTGCTACTGTACCACTTGCATGACCACAACATA ATAGTCAAGTCATTCCGCATCATCTGATGTGCACCACAGTCACATGATGC GCTGAACCGCAGCCTATGTTACCAGTTTGTGTTTCATGCCAGTCGTCTAC TTGGGGTTAGGGTCTGGGTCCCTGAATCTAACCCTGTTCAGGCACCAATG CGGCCAACCTTTATGTCTCCTTTCAACGATAAAGAGTCTCACTCGCATCA GTACAGTTGTATGCTCCACGATATGATAGTTTGTTTTGGTGTGGCAGCGA CGTTTGAAGATGTGTATGTACACCAGCAAGTCATGTACATTACCGTTGCG GCTGATTCTGACAGCTTTGATGTGTGATACACGCACGTGCCAACAAGCAT GTAAATTCACCGGAAATGCTCAGGAAGTGTTGACTTACTTGCCACTGTTG TGCACATGTCAAAACTTTACCACAATGTCACTTCATAGACACAACCTCTG CCACTGCATTTCTTGTGTTCATTTTCAGGCGGCTGCTGCTAAGTTGGCTC GAGCGGGTGAGGCAGACGATGCGCTAGTGCTGCTGCTGGAGGCTAACCTT CAAGAGGCACACAAGGCAGGACCACAGGGAGCCGGCGCGGTTAGGGTGCT TACCAACGTCAAGTAAGTCCTACCTGATGTTTTTTTTTACTGTGTCTGTT GTCTGTTACTTGTGATTACCACGCAACGCGTTTGGGTTCTCTATCATGGA GTGCTGCTTTGTCATCTCAAACTACTACATGCGCAACAGGATGACACCAG GAGACAAAATATCATTCACGAGCGATGTTTTTTCATGTGACGTGTGTGTA GGAGCAGGACAGGACAGTTGTGGCCTATGAGACGTCAGCTATCAACGCTT TTAGTTCGCACATGTGGCAGCTGTTTCCCTACACAGACTGCTCTTGAGAA CACATTCAAATCTTGCTCAGGTACGTGTTGAAACGTATATGCACAGCCAG CTCACTGCTGTTGTTGTGAGCTATGTACCGTCTTTTCGCTCTTCAAGCGT AAGGGGCACCTGATTGAGAACATACCCAAACCTATTCAAGCCTGGGGATG CGTACGCCAACATCCATCTAAGCCGCCCCCTTTGGATCTGCCGTGCGCGC ATGGCGTTGATTCACACCCTTGGTCATGAGCACGTCAGTCTACAAGAGAG CCCTGCGAACAGAACAGCGACTCGCAAAGCACCAGACGACGATAGTCAGC TGTGTACAGAACGAACATCAACCACGCCACAGCTACTGAGGCCGCAGGCA CCCTCCTGAATCTCAAAACCAGAACTTTAACTTCAAGGGAAGTAACAGAA AACGTGTAGGGACCCCCTCGTGGGGGCCATTGTGGGGCCCATTGGGCCTG ATTTGTGTTGCTTAACCCATAGGGCTACTACACAGGTCATGTTTGAAAGC CCAGGATACAAAGCCTTGTTCCAGTTTGCTTGTCCAATGTATACAGACGC CTGAGTTCATCAGCTAGTATAGGTGCCCCCGGCCTGAACAGCCAGAAGTT GGTCATTATCTTTGATCACTCGTGCGTGCGGCGGCTTGAAGCTCTGACAA TGTGTGCAATTGCATCACGAGTGGGAAGATGGGCCAACTTGGCGTTGCTT GCTTGCTTGCGCGCTGTCTGTGTGTCTCACATACATCCCCCCCCCCCTCT TTCTCCCCTTGCACTCATTTACCAGGAATATCCTACAGGCAGAAATCGAT CGCAAGCTGGAGCCTGAGAAGCGCCTGTTGAAGCAGTGCCTGCGATGCGA TACAGCAGAAGAAATGGAGGCGGTGCTGCATGAGGCATTCAGGCCACGTG TCAAGCTGCAACTGGCTGAGAACAAGGAGAGCAGTGATGAACCCCTTGTG GCACCACCCGCATTCATCGCAGCGGTGCGCAACCTCAAGTTGAACTTTGG AAATGTAGGCGAGGACGAGACGGAGTTTGCAGACAAGGTGGATGTGATCA TTTCGACCGCAGAGAAGGTGGCAACGGCCTTGTATGGCGAGAGCATGAGT CCCAAGGATCAACAGGACAGGGCATGGCGAGAGCACGGTGCCAGTGTGTG GGATCTTGAGAAGCTAGAGAATGACGCCATGTTAAGGGGGGAGGAGATGC CATGGGCAAACGACAAGTATGACACTATGTTGCCAAATCTCAACAAAGGT GACAAGTCTGGCGAGTTCAAGATTGGTGGCTCGTAG
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Coding sequence (CDS) from alignment at Contig_134:327131..331216+

>mRNA_12333 ID=mRNA_12333|Name=jgi.p|Trimin1|176218|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1026bp|location=Sequence derived from alignment at Contig_134:327131..331216+ (Tribonema minus UTEX_B_3156 )
ATGCGCAACCTTCAGGCTGGCGCCGGCAACCAGTCACCGGAAACTGCTGA
GGAAGCTGCTGCGGAGGCTGCAAGGAGGAAGGGCAGTCCCTGGGACTCTG
TGCCAGAAGCTGTGCGGCAGTCATATGAACAAGTCCTCAAGACCATTATC
GACAGACCTGATTCTATCACCTTGACGGACGCAGTAGAGGCTGCTTACAA
CAAGTGCGACATTCAGTTCCTGGCTCTACTGAAGGAGAAGATGGCCAGTG
CTTCTGGTGACTCTAAAGTCCAGCTCGTGGAGGTGGCAGATGAGGTCAAC
AATGCCATGCAGCGCCGCATGAGCTCAGCTACTAGCAAGCTTCAGACAAT
ACTCAGCGCTGGCAACCCCATTGCTATTGAGGCGGCTGCTGCTAAGTTGG
CTCGAGCGGGTGAGGCAGACGATGCGCTAGTGCTGCTGCTGGAGGCTAAC
CTTCAAGAGGCACACAAGGCAGGACCACAGGGAGCCGGCGCGGTTAGGGT
GCTTACCAACGTCAAGAATATCCTACAGGCAGAAATCGATCGCAAGCTGG
AGCCTGAGAAGCGCCTGTTGAAGCAGTGCCTGCGATGCGATACAGCAGAA
GAAATGGAGGCGGTGCTGCATGAGGCATTCAGGCCACGTGTCAAGCTGCA
ACTGGCTGAGAACAAGGAGAGCAGTGATGAACCCCTTGTGGCACCACCCG
CATTCATCGCAGCGGTGCGCAACCTCAAGTTGAACTTTGGAAATGTAGGC
GAGGACGAGACGGAGTTTGCAGACAAGGTGGATGTGATCATTTCGACCGC
AGAGAAGGTGGCAACGGCCTTGTATGGCGAGAGCATGAGTCCCAAGGATC
AACAGGACAGGGCATGGCGAGAGCACGGTGCCAGTGTGTGGGATCTTGAG
AAGCTAGAGAATGACGCCATGTTAAGGGGGGAGGAGATGCCATGGGCAAA
CGACAAGTATGACACTATGTTGCCAAATCTCAACAAAGGTGACAAGTCTG
GCGAGTTCAAGATTGGTGGCTCGTAG
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